Your job contains 1 sequence.
>004921
MASSISNPLLTSNFFGSQILISPPTPKTRRLSVSFPFPSRTKRTTQATAILRKELEPNNA
SSEAASKRRTVTTEATMAALLLSSIAPQALAVDNTPPPPPPPLVQAQPSKPNPSNSSPFG
QNLLLTAPKPQSQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRAT
VIVPNDPDLIDILAMNGVDISVSEGDSGNGLFSFVGNLLFPFLAFAGLFFLFRRAQGGPG
GPGGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAK
IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK
APCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL
DSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQN
LMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA
LMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF
GEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA
TADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL
FVA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004921
(723 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 2720 2.2e-295 2
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 2729 4.8e-284 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 1441 1.5e-147 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 1373 2.4e-140 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 1373 2.4e-140 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 1347 6.3e-140 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 1341 5.8e-137 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1330 8.5e-136 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 1326 2.3e-135 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1319 1.2e-134 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1314 4.2e-134 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 1309 1.4e-133 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1306 3.0e-133 1
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 1282 1.0e-130 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1273 9.3e-130 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1273 9.3e-130 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 1246 6.8e-127 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1235 9.9e-126 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 1233 1.6e-125 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1218 6.3e-124 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1218 6.3e-124 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1168 1.7e-120 2
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1168 1.7e-120 2
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1152 1.7e-120 2
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1152 1.7e-120 2
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 1142 7.1e-116 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 1104 1.1e-114 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 1121 1.2e-113 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 1076 3.8e-112 2
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 1083 1.0e-111 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 641 4.3e-111 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 641 4.3e-111 2
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 1066 2.4e-110 2
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 1063 3.0e-110 2
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 1082 1.6e-109 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 1073 1.5e-108 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 1073 1.5e-108 1
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 1073 1.5e-108 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 1073 1.5e-108 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 1070 3.0e-108 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 1068 4.9e-108 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 1061 2.7e-107 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 1061 2.7e-107 1
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 1061 2.7e-107 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 1058 5.7e-107 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 1057 7.2e-107 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 1053 1.9e-106 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 1033 2.4e-106 2
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 1049 5.1e-106 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 1044 1.7e-105 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 1020 2.2e-105 2
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 1014 5.8e-105 2
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 1037 9.5e-105 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 1014 2.5e-104 2
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 1030 5.3e-104 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 1014 2.6e-102 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 1013 3.3e-102 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 1013 3.3e-102 1
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 1009 8.8e-102 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 1009 8.8e-102 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 1008 1.1e-101 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 1004 3.0e-101 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 1003 3.8e-101 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 1000 7.9e-101 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 997 1.7e-100 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 997 1.7e-100 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 989 1.2e-99 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 989 1.2e-99 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 969 1.8e-99 2
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 987 1.9e-99 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 984 3.9e-99 1
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 982 6.4e-99 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 980 1.0e-98 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 967 2.5e-97 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 949 2.9e-97 2
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 951 1.2e-95 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 950 1.6e-95 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 944 6.8e-95 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 941 1.4e-94 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 940 1.8e-94 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 931 1.6e-93 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 931 1.6e-93 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 917 5.0e-92 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 905 9.3e-91 1
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 905 9.3e-91 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 893 1.7e-89 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 891 2.8e-89 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 883 2.0e-88 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 583 1.3e-86 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 583 1.3e-86 2
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 714 2.9e-76 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 755 7.3e-75 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 707 4.7e-72 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 705 9.7e-72 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 697 2.0e-71 2
TAIR|locus:2206380 - symbol:FTSH12 "FTSH protease 12" spe... 662 8.2e-69 2
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 630 7.3e-63 2
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 649 1.5e-62 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 576 6.8e-56 1
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 515 1.6e-51 2
WARNING: Descriptions of 629 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 2720 (962.5 bits), Expect = 2.2e-295, Sum P(2) = 2.2e-295
Identities = 553/695 (79%), Positives = 595/695 (85%)
Query: 30 RLSVSFPFPSRTKRTTQATAILRKELEPNNASSEAASKRRTVTTEATMAALLLSSIAPQA 89
++ +S P P T ++ + I RK + S++ +++ ++A +AALL SS +PQA
Sbjct: 19 QIIISAPTPKTTTKSLPFSVISRKRYQ----ISQSEKLMKSLPSQAALAALLFSSSSPQA 74
Query: 90 LAVDNTXXXXXXXLV-QAQXXXXXXXXXXXFGQNLLLTAPKPQSQSSDLPEGSQWRYSEF 148
LAV+ + +AQ FGQN+L+TAP PQ+QSSDLP+G+QWRYSEF
Sbjct: 75 LAVNEPVQPPAPTITAEAQSPNLST-----FGQNVLMTAPNPQAQSSDLPDGTQWRYSEF 129
Query: 149 LNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGDSG 208
LNAVKKGKVERV+FSKDGS LQLTAVD RRATVIVPNDPDLIDILAMNGVDISVSEG+ G
Sbjct: 130 LNAVKKGKVERVKFSKDGSVLQLTAVDNRRATVIVPNDPDLIDILAMNGVDISVSEGEGG 189
Query: 209 NGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQEVPETGVTF 268
NGLF F+GN R Q MDFGRSKSKFQEVPETGVTF
Sbjct: 190 NGLFDFIGNLLFPLLAFGGLFYLFRGGQGGAGGPGGLGGPMDFGRSKSKFQEVPETGVTF 249
Query: 269 ADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGV 328
DVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGV
Sbjct: 250 GDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGV 309
Query: 329 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDER 388
PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV NDER
Sbjct: 310 PFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDER 369
Query: 389 EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 448
EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL
Sbjct: 370 EQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQIL 429
Query: 449 QVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER 508
+VHSRGKA+ KDVD+EK++RRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALER
Sbjct: 430 KVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALER 489
Query: 509 IIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPS 568
IIAGPEKKNAVVS+EKK+LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPS
Sbjct: 490 IIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPS 549
Query: 569 EERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFG 628
EERLESGLYSRSYLENQMAVALGGRVAEEVIFG+ENVTTGASNDFMQVSRVARQMVERFG
Sbjct: 550 EERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFG 609
Query: 629 FSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHI 688
FSKKIGQVA+GG GGNPFLGQ MSSQKDYSMATADVVDAEVRELVE AY RAK+IITT I
Sbjct: 610 FSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQI 669
Query: 689 DILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 723
DILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+V+
Sbjct: 670 DILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704
Score = 140 (54.3 bits), Expect = 2.2e-295, Sum P(2) = 2.2e-295
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 1 MASSISNPLL-TSNFFGSQILISPPTPKTRRLSVSFPFPSRTKRTTQATAILRKELEPNN 59
MA++ SNPLL +SNF GSQI+IS PTPKT + S PF + I RK +
Sbjct: 1 MATTSSNPLLLSSNFLGSQIIISAPTPKTT--TKSLPF----------SVISRKRYQ--- 45
Query: 60 ASSEAASKRRTVTTEATMAALLLSSIAPQALAVD 93
S++ +++ ++A +AALL SS +PQALAV+
Sbjct: 46 -ISQSEKLMKSLPSQAALAALLFSSSSPQALAVN 78
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 2729 (965.7 bits), Expect = 4.8e-284, P = 4.8e-284
Identities = 568/723 (78%), Positives = 605/723 (83%)
Query: 6 SNPLL--TSNFF-GSQILISPPTPKTRRLSVSFPFPSRTKRTTQATAILRKELEPNNASS 62
SN LL +SNFF GS I+IS PTPKT R SFPF ++ Q T + E PN +
Sbjct: 3 SNSLLRSSSNFFLGSHIIISSPTPKTTR-KPSFPFSFVSRAKYQITRSSQDENSPNGKPN 61
Query: 63 EAASKRRTVTTEATMAALLLSSIAPQALAVDNTXXXXXXXLVQAQXXXXXXXXXXXFGQN 122
S ++ +AA+LLSSI+ LA+ +V F QN
Sbjct: 62 SPFS------SQVALAAILLSSISSSPLALAVVDEPASPSVVIESQAVKPSTPSPLFIQN 115
Query: 123 LLLTAPKPQSQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVI 182
+L AP P+S SDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGS +QLTAVD RRA+VI
Sbjct: 116 EILKAPSPKS--SDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSVVQLTAVDNRRASVI 173
Query: 183 VPNDPDLIDILAMNGVDISVSEGDS-GNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXX 241
VPNDPDLIDILAMNGVDISVSEG+S GN LF+ +GN RRAQ
Sbjct: 174 VPNDPDLIDILAMNGVDISVSEGESSGNDLFTVIGNLIFPLLAFGGLFLLFRRAQGGPGG 233
Query: 242 XXXXXXX-MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAK 300
MDFGRSKSKFQEVPETGV+FADVAGADQAKLELQEVVDFLKNPDKYTALGAK
Sbjct: 234 GPGGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAK 293
Query: 301 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK 360
IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK
Sbjct: 294 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSK 353
Query: 361 APCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 420
APCIVFIDEIDAV NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL
Sbjct: 354 APCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVL 413
Query: 421 DSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQN 480
DSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKAL KDVDF+K++RRTPGFTGADLQN
Sbjct: 414 DSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQN 473
Query: 481 LMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA 540
LMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVS+EKK+LVAYHEAGHALVGA
Sbjct: 474 LMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGA 533
Query: 541 LMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 600
LMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF
Sbjct: 534 LMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 593
Query: 601 GEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 660
G+ENVTTGASNDFMQVSRVARQM+ERFGFSKKIGQVA+GGPGGNPF+GQQMSSQKDYSMA
Sbjct: 594 GDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMA 653
Query: 661 TADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
TAD+VDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL
Sbjct: 654 TADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAEL 713
Query: 721 FVA 723
+++
Sbjct: 714 YIS 716
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 300/575 (52%), Positives = 400/575 (69%)
Query: 145 YSEFLNAVKKGKVERVRFSKDG--SALQLT--AVDGR-RATVIVP-NDPDLIDILAMNGV 198
Y FL V G++ V ++G + +Q++ VD R+ V +P N P+LI L + +
Sbjct: 45 YGRFLEYVDAGRITSVDLYENGRTAIVQVSDPEVDRTLRSRVDLPTNAPELIARLRDSNI 104
Query: 199 DISVSEGDSGNGL-FSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSK 257
+ S NG+ + FVGN RR+ M+FG+SK++
Sbjct: 105 RLD-SHPVRNNGMVWGFVGNLIFPVLLIASLFFLFRRSSNMPGGPGQA---MNFGKSKAR 160
Query: 258 FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
FQ +TGV F DVAG D+AK ELQEVV FLK P+++TA+GAKIPKG LLVGPPGTGKTL
Sbjct: 161 FQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTL 220
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APC++FIDEIDAV
Sbjct: 221 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR 280
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
NDEREQT+NQLLTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VD
Sbjct: 281 GAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVD 340
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD +GR +IL+VH+R K LA +V + I+RRTPGF+GADL NL+NEAAIL ARR I
Sbjct: 341 APDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRG 557
+ EI DA++R++AG E +V + K+L+AYHE GHA+VG L+ ++DPV K+++IPRG
Sbjct: 401 TLLEIDDAVDRVVAGMEG-TPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRG 459
Query: 558 QAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVS 617
QA GLT+F P+EE+ GL +++ L ++A A+GGR AEE +FG++ VTTGA D QV+
Sbjct: 460 QAQGLTWFTPNEEQ---GLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVT 516
Query: 618 RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAY 677
+ARQMV RFG S +G +++ GG FLG + ++ +YS A +DA+VR+L E +
Sbjct: 517 EMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGH 575
Query: 678 TRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
A++I+ +++ +L LLIEKET+DGEEF +
Sbjct: 576 QMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
Identities = 283/573 (49%), Positives = 389/573 (67%)
Query: 144 RYSEFLNAVKKGKVERVRFSKDGSALQLTAV--DGRRATVIVP-NDPDLI-DILAMNGVD 199
+Y EF + ++KG+V V D + +++ V DG R P D +L D+ MN V
Sbjct: 36 KYDEFYSLLEKGQVASVAIQTDRTINEISGVLRDGTRFKTRGPLEDAELYKDLKKMN-VT 94
Query: 200 ISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQ 259
+ + + + + ++AQ M FG+S++K
Sbjct: 95 VEIMPPKEPAFWANLLSSLLPVLLMVGLFFFFMQQAQGGGNRV------MSFGKSRAKLH 148
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
+ VTFADVAG D+ K EL E+V+FLKNP KY LGA+IPKG LL G PGTGKTLLA
Sbjct: 149 TDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLA 208
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
RA+AGEAGVPFFS + S+FVE+FVGVGASRVRDLFE+AK APCIVFIDEIDAV
Sbjct: 209 RAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGA 268
Query: 380 XXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
+DEREQT+NQLL EMDGF+ N G+I++AATNRPD+LD ALLRPGRFDR + VD P
Sbjct: 269 GLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTP 328
Query: 440 DVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISK 499
D+ GR +IL+VH +GK L DVD + ++RRTPGFTGADL N++NEAA+LAARR+ K I+
Sbjct: 329 DINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINM 388
Query: 500 DEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 559
+E+ +A+ER+IAGPEKK+ V+S+ +K+LVAYHEAGHA+VG L+P DPV KISIIPRG+A
Sbjct: 389 EEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRA 448
Query: 560 GGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRV 619
GG T P E+R ++S L +++ + LGGRVAE ++ E+++TGA ND + +
Sbjct: 449 GGYTLLLPEEDR---SYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLERATET 503
Query: 620 ARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTR 679
AR+MV +G S+++G + G FLG+ ++ ++YS A +D EVR+++++ Y+R
Sbjct: 504 ARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSR 563
Query: 680 AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
A++I+ +I++LH +A L+E ET++GEEF L
Sbjct: 564 AEEILKKNINVLHLVATKLMEVETMEGEEFEKL 596
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 1373 (488.4 bits), Expect = 2.4e-140, P = 2.4e-140
Identities = 283/573 (49%), Positives = 389/573 (67%)
Query: 144 RYSEFLNAVKKGKVERVRFSKDGSALQLTAV--DGRRATVIVP-NDPDLI-DILAMNGVD 199
+Y EF + ++KG+V V D + +++ V DG R P D +L D+ MN V
Sbjct: 36 KYDEFYSLLEKGQVASVAIQTDRTINEISGVLRDGTRFKTRGPLEDAELYKDLKKMN-VT 94
Query: 200 ISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQ 259
+ + + + + ++AQ M FG+S++K
Sbjct: 95 VEIMPPKEPAFWANLLSSLLPVLLMVGLFFFFMQQAQGGGNRV------MSFGKSRAKLH 148
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
+ VTFADVAG D+ K EL E+V+FLKNP KY LGA+IPKG LL G PGTGKTLLA
Sbjct: 149 TDEKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLA 208
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
RA+AGEAGVPFFS + S+FVE+FVGVGASRVRDLFE+AK APCIVFIDEIDAV
Sbjct: 209 RAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGA 268
Query: 380 XXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
+DEREQT+NQLL EMDGF+ N G+I++AATNRPD+LD ALLRPGRFDR + VD P
Sbjct: 269 GLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTP 328
Query: 440 DVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISK 499
D+ GR +IL+VH +GK L DVD + ++RRTPGFTGADL N++NEAA+LAARR+ K I+
Sbjct: 329 DINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINM 388
Query: 500 DEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 559
+E+ +A+ER+IAGPEKK+ V+S+ +K+LVAYHEAGHA+VG L+P DPV KISIIPRG+A
Sbjct: 389 EEMEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRA 448
Query: 560 GGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRV 619
GG T P E+R ++S L +++ + LGGRVAE ++ E+++TGA ND + +
Sbjct: 449 GGYTLLLPEEDR---SYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLERATET 503
Query: 620 ARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTR 679
AR+MV +G S+++G + G FLG+ ++ ++YS A +D EVR+++++ Y+R
Sbjct: 504 ARRMVMEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSR 563
Query: 680 AKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
A++I+ +I++LH +A L+E ET++GEEF L
Sbjct: 564 AEEILKKNINVLHLVATKLMEVETMEGEEFEKL 596
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 1347 (479.2 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 290/582 (49%), Positives = 381/582 (65%)
Query: 141 SQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVD---GRRAT---VIVPN-DPDLIDIL 193
S+ YS FL + K +V +V ++G+ + AV G R V +P +L+ L
Sbjct: 90 SRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKL 149
Query: 194 AMNGVDISV--SEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDF 251
+D + ++ D G+ LF+ +GN RR+ + F
Sbjct: 150 RAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQF 209
Query: 252 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GAKIPKG LL+GPP
Sbjct: 210 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPP 269
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 270 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 329
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV NDEREQT+NQLLTEMDGF GN+GVIV+AATNR D+LDSALLRPGRFD
Sbjct: 330 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFD 389
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
RQV+VD PDV GR IL+VH+ K DV E I+ RTPGF+GADL NL+NEAAILA R
Sbjct: 390 RQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGR 449
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVSDEKKK-LVAYHEAGHALVGALMPEYDPVAK 550
R IS EI D+++RI+AG E V++D K K LVAYHE GHA+ G L P +D V K
Sbjct: 450 RARTSISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQK 507
Query: 551 ISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGAS 610
+++IPRGQA GLT+F PS++ L S+ L ++ LGGR AEE+IFG+ VTTGA
Sbjct: 508 VTLIPRGQARGLTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAV 564
Query: 611 NDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVR 670
D Q++ +ARQMV FG S IG ++ + +M ++ S A+ +D+ V+
Sbjct: 565 GDLQQITGLARQMVTTFGMSD-IGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVK 623
Query: 671 ELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+L ++AY A I + + + KL ++L+EKET+ G+EF ++
Sbjct: 624 KLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAI 665
Score = 43 (20.2 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 144 RYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRR 178
R + F + ++ KV V+ S DG Q +GRR
Sbjct: 30 RQTSFSSVIRTSKVNVVKASLDGKKKQ----EGRR 60
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 292/603 (48%), Positives = 385/603 (63%)
Query: 120 GQNLLLTAPKPQSQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVD---G 176
G LL + + S+ YS FL + KG+VE+V ++G+ + AV G
Sbjct: 62 GVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELG 121
Query: 177 ---RRATVIVPN-DPDLIDILAMNGVDISV--SEGDSGNGLFSFVGNXXXXXXXXXXXXX 230
+R V +P +L+ L +D + ++ D G+ + + +GN
Sbjct: 122 NRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIGNLAFPVILIGGLFL 181
Query: 231 XXRRAQXXXXXXXXXXXXMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKN 290
RR+ + G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK
Sbjct: 182 LSRRSSGGMGGPGGPGFPLQIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKK 241
Query: 291 PDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRV 350
P+++TA+GA+IPKG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRV
Sbjct: 242 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRV 301
Query: 351 RDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIV 410
RDLF+KAK APCIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+GVIV
Sbjct: 302 RDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIV 361
Query: 411 LAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRT 470
+AATNR D+LDSALLRPGRFDRQV+VD PDV GR IL+VHS K V E I+ RT
Sbjct: 362 VAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRT 421
Query: 471 PGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKK-LVA 529
PGF+GADL NL+NEAAILA RR IS EI D+++RI+AG E V++D K K LVA
Sbjct: 422 PGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVA 479
Query: 530 YHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVA 589
YHE GHA+ G L P +D V K+++IPRGQA GLT+F PS++ L S+ L ++
Sbjct: 480 YHEVGHAICGTLTPGHDAVQKVTLIPRGQARGLTWFIPSDDPT---LISKQQLFARIVGG 536
Query: 590 LGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQ 649
LGGR AEEVIFGE VTTGA +D Q++ +A+QMV FG S+ IG ++ +
Sbjct: 537 LGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQMVTTFGMSE-IGPWSLMDSSEQSDVIM 595
Query: 650 QMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEF 709
+M ++ S A+ +D V+ L + AY A I + + + K+ ++L+EKET+ G+EF
Sbjct: 596 RMMARNSMSEKLANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEF 655
Query: 710 MSL 712
++
Sbjct: 656 RAI 658
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
Identities = 273/576 (47%), Positives = 375/576 (65%)
Query: 131 QSQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVP-NDPDL 189
Q S + YS FL+ V+ G+V V D ++ + G + T I+P D DL
Sbjct: 23 QGYSPSSSSSQKMDYSTFLDNVRDGQVATVEVKSDQRTIEGSKRTGEKFTTIMPLYDQDL 82
Query: 190 IDILAMNGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXM 249
I+ L G+ + E + L + R+ Q M
Sbjct: 83 INDLDRKGITMKGQEAEESGFLTQIFISWFPMLLLIGVWIFFMRQMQGGGGKGA-----M 137
Query: 250 DFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 309
FG+SK+K + TFADVAG D+AK E++E+VD+L++P K+ LG +IP G L+VG
Sbjct: 138 SFGKSKAKLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVG 197
Query: 310 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 369
PPGTGKTLLA+A+AGE+ VPFF+ + S+FVE+FVGVGASRVRD+FE+AK APCI+FIDE
Sbjct: 198 PPGTGKTLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDE 257
Query: 370 IDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
IDAV +DEREQT+NQ+L EMDGF GN G+IV+AATNRPDVLDSALLRPGR
Sbjct: 258 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGR 317
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILA 489
FDRQV V PDV GR +IL+VH R L++DV I+R TPGF+GADL NL+NEAA+ A
Sbjct: 318 FDRQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFA 377
Query: 490 ARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVA 549
AR + + + +E A ++I+ G E+++ V+S+ +K++ AYHEAGHA+VG L+PE+DPV
Sbjct: 378 ARGNRRVVGMEEFERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVH 437
Query: 550 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGA 609
K++IIPRG+A G+TFF P + + SR LE+Q++VA GGR+AEE+I+G E V+TGA
Sbjct: 438 KVTIIPRGRALGVTFFLPEADAISQ---SRRKLESQISVAYGGRLAEELIYGTEKVSTGA 494
Query: 610 SNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEV 669
S D + +AR MV ++GFS K+G + G FLG+ M K S TA ++D EV
Sbjct: 495 SQDIKYATSIARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDETATLIDTEV 554
Query: 670 RELVETAYTRAKQIITTHIDILHKLAQLLIEKETVD 705
+ ++ Y+RAKQI+ ++DILH + L++ ET+D
Sbjct: 555 KAFIDKNYSRAKQILQDNVDILHSMKDALMKYETID 590
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 1326 (471.8 bits), Expect = 2.3e-135, P = 2.3e-135
Identities = 271/576 (47%), Positives = 377/576 (65%)
Query: 145 YSEFLNAVKKGKVERVRFSKDGSALQL-----TAVDGRRATVIVPNDPDLIDIL--AMNG 197
Y +F+ ++KG+V V+ ++ + G + PN +L + G
Sbjct: 37 YDKFITKLEKGEVRNVQLQPKNGVFEVKGQFNNSSQGEQFVTYAPNTEELQKKINDKAQG 96
Query: 198 VDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSK 257
++ + + +F + +AQ M+FG+SK+K
Sbjct: 97 AEVKYQPAEETSAWVTFFTSIIPFVIIFILFFFLLNQAQGGGSRV------MNFGKSKAK 150
Query: 258 FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+ V F DVAGAD+ K EL EVV+FLK+P K+ +GA+IPKG LLVGPPGTGKTL
Sbjct: 151 LYNDEKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTL 210
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVAGEAGVPFFS + S+FVE+FVGVGASRVRDLFE AK APCI+FIDEIDAV
Sbjct: 211 LARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQR 270
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+DEREQT+NQLL EMDGF N G+I++AATNRPD+LD ALLRPGRFDRQ+TVD
Sbjct: 271 GAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVD 330
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
RPDV GR +L+VH+R K L ++++ I+ RTPGF+GADL+NL+NEAA++AAR+D K+I
Sbjct: 331 RPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKI 390
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRG 557
+I +A +R+IAGP KK+ V+S++++ +VA+HEAGH ++G ++ E D V K++I+PRG
Sbjct: 391 DMSDIDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRG 450
Query: 558 QAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVS 617
QAGG P E+R ++ L +++ LGGRVAEE++FGE V+TGA NDF + +
Sbjct: 451 QAGGYAVMLPKEDRY---FMTKPELLDKITGLLGGRVAEEIVFGE--VSTGAHNDFQRAT 505
Query: 618 RVARQMVERFGFSKKIGQVAIGGP-GGNPFLGQQMSSQKDYSMATADVVDAEVRELVETA 676
+AR+MV FG S K+G + G GG FLG+ S+++YS A A +D E++ +++
Sbjct: 506 GIARRMVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTIMKEC 565
Query: 677 YTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
Y RAKQI+T + D L +A+ L+E ET+D E+ L
Sbjct: 566 YARAKQILTDNRDKLDLIAKTLLEVETLDAEQINHL 601
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 281/573 (49%), Positives = 375/573 (65%)
Query: 138 PEGSQWR--YSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAM 195
P +Q R YS+F+ AV GKV V + G+ + DG+ P D L + L
Sbjct: 28 PRTTQERLGYSDFIAAVDAGKVSTV--TVQGNEIIGKYSDGKEFRSYKPTDAMLSEKLLE 85
Query: 196 NGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSK 255
+++S + FS + R+ Q M FG+S+
Sbjct: 86 KKINVSAKPEEEKVSWFSIFISWFPLLFLVGVWIFFMRQMQGGGGKA------MAFGKSR 139
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
+K + VTF DVAG D+AK EL+E++ FLK+P K+T LG +IPKG LLVGPPGTGK
Sbjct: 140 AKLLTEAQGRVTFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGK 199
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEAGVPFFS + S+FVE+FVGVGASRVRDLF + K APCI+FIDEIDAV
Sbjct: 200 TLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGR 259
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+DEREQT+NQLL EMDGF N GVI++AATNRPDVLD ALLRPGRFDRQV
Sbjct: 260 HRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVV 319
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V +PDV GR IL+VH++ LA DVD I+R TPGF+GADL N++NEAA+LAAR+D
Sbjct: 320 VPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKS 379
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
+ + DA ++++ G E+++ V+S+E+KK AYHEAGH LV L+P DPV K+SIIP
Sbjct: 380 FVEMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPVHKVSIIP 439
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG+A G+T P E++ Y++ L N++AV +GGR AEE+IF E +TTGA ND +
Sbjct: 440 RGRALGVTMQLPIEDKHS---YNKESLLNRIAVLMGGRAAEEIIFNE--LTTGAGNDIER 494
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+ +AR+MV +G S+K+G V G + FLG+ MS K+YS ATA +D E+R++++
Sbjct: 495 ATEIARKMVCEWGMSEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAVEIDEEIRKIIDG 554
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
+Y+R KQ++ ++ +LH LA LIEKE + G+E
Sbjct: 555 SYSRVKQLLNENLSVLHCLATQLIEKENLTGDE 587
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 273/583 (46%), Positives = 376/583 (64%)
Query: 131 QSQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVP-NDPDL 189
QS G + YS FL V +V R + G + +T D R T +P DP L
Sbjct: 20 QSFGPSESNGRKVDYSTFLQEVNNDQVREARIN--GREINVTKKDSNRYTTYIPVQDPKL 77
Query: 190 IDILAMNGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXM 249
+D L V + + + L S + R+ Q M
Sbjct: 78 LDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA-----M 132
Query: 250 DFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVG 309
FG+SK++ + TFADVAG D+AK E+ E+V++L+ P ++ LG KIPKG L+VG
Sbjct: 133 SFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVG 192
Query: 310 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 369
PPGTGKTLLA+A+AGEA VPFF+ + S+FVE+FVGVGASRVRD+FE+AK APCI+FIDE
Sbjct: 193 PPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDE 252
Query: 370 IDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
IDAV +DEREQT+NQ+L EMDGF GN G+IV+AATNRPDVLD ALLRPGR
Sbjct: 253 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGR 312
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILA 489
FDRQV V PDV GR +IL+VH R LA D+D I+R TPGF+GADL NL+NEAA+ A
Sbjct: 313 FDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372
Query: 490 ARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVA 549
AR + + +S E A ++I+ G E+++ V+++ +K+ AYHEAGHA++G L+PE+DPV
Sbjct: 373 ARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVH 432
Query: 550 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGA 609
K++IIPRG+A G+TFF P + + + SR LE+Q++ GGR+AEE+I+G E+V+TGA
Sbjct: 433 KVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGPEHVSTGA 489
Query: 610 SNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEV 669
SND + +AR MV ++GFS+K+G + G FLG+ ++ K S TA ++D EV
Sbjct: 490 SNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEV 549
Query: 670 RELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+ L+E Y RA+Q++T ++DILH + L++ ET+D + L
Sbjct: 550 KALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 278/591 (47%), Positives = 380/591 (64%)
Query: 133 QSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSAL----QLTAVDGRRATVI-VPNDP 187
Q+S+ P+ YS F+ + GKV+ V QL D + + VP
Sbjct: 26 QTSN-PKTENMSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLKNYDKDQYFLTHVPEGK 84
Query: 188 DLIDIL-AMNGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXX 246
I A+ D+ V +G +F+ +AQ
Sbjct: 85 GADQIFNALKKTDVKVEPAQETSGWVTFLTTIIPFVIIFILFFFLLNQAQGGGSRV---- 140
Query: 247 XXMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCL 306
M+FG+SK+K + V F DVAGAD+ K EL EVV+FLK+P K+ LGA+IPKG L
Sbjct: 141 --MNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVL 198
Query: 307 LVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVF 366
LVGPPGTGKTLLA+A AGEAGVPFFS + S+FVE+FVGVGASRVRDLFE AK APC++F
Sbjct: 199 LVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIF 258
Query: 367 IDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 426
IDEIDAV +DEREQT+NQLL EMDGFS N G+I++AATNR D+LD ALLR
Sbjct: 259 IDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLR 318
Query: 427 PGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAA 486
PGRFDRQ+TVDRPDV GR +L+VH+R K L + V+ + I+ RTPGF+GADL+NL+NEAA
Sbjct: 319 PGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAA 378
Query: 487 ILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYD 546
++AAR++ K+I +I +A +R+IAGP KK+ V+S +++ +VAYHE GH ++G ++ E D
Sbjct: 379 LVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEAD 438
Query: 547 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVT 606
V K++I+PRGQAGG P E+R ++ L +++ LGGRVAEE+IFGE V+
Sbjct: 439 MVHKVTIVPRGQAGGYAVMLPREDRY---FQTKPELLDKIVGLLGGRVAEEIIFGE--VS 493
Query: 607 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIG-GPGGNPFLGQQMSSQKDYSMATADVV 665
TGA NDF + + +AR+MV FG S+K+G + G GG FLG+ +++++YS A +
Sbjct: 494 TGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEI 553
Query: 666 DAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG 716
D E++ +++ Y RAKQI+T + D L +AQ L++ ET+D E+ L G
Sbjct: 554 DQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHG 604
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
Identities = 281/587 (47%), Positives = 377/587 (64%)
Query: 132 SQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVP-NDPDLI 190
S+ SD+ + YS+F+ AV KV V G ++ D + T +P D L+
Sbjct: 27 SRQSDV---QPYSYSQFVQAVNNDKVSSVVIQ--GHEIKGVTKDNKHFTTYLPMEDQALL 81
Query: 191 DILAMNGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMD 250
+ L GV + E +F + R M
Sbjct: 82 NQLMAKGVSVK-GEPPKQQSMFLHILISWLPFLILIFVWILFMRQMQGGGRGGGP---MS 137
Query: 251 FGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
FGRSK++ + VTF DVAG D+AK E++E+V+FL++P K+ LG K+P G LLVGP
Sbjct: 138 FGRSKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLVGP 197
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+AVAGEA VPFF+ + S+FVE+FVGVGASRVRD+F++AK +APCI+FIDEI
Sbjct: 198 PGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEI 257
Query: 371 DAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 430
DAV +DEREQT+NQLL EMDGF G G+IV+AATNRPDVLD ALLRPGRF
Sbjct: 258 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRF 317
Query: 431 DRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAA 490
DRQV V PD+ GR IL+VH LAKDV I+R TPGF+GADL N++NEAA+ AA
Sbjct: 318 DRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAA 377
Query: 491 RRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAK 550
R + K++S E A ++I+ G E+++ V+SD++KKL AYHEAGHA+VG M E+DPV K
Sbjct: 378 RENKKDVSMSEFERAKDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLEHDPVYK 437
Query: 551 ISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGAS 610
++IIPRG+A G+T F P +R ++ LE Q+A GGR+AEE+IFG + VTTGAS
Sbjct: 438 VTIIPRGRALGVTMFLPEHDRYSM---TKRRLECQLAGLFGGRIAEEIIFGPDLVTTGAS 494
Query: 611 NDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVR 670
ND + + +AR MV ++G S+K+G + G FLG+ ++ +KD S AT +D+EVR
Sbjct: 495 NDIEKATEIARNMVTKWGLSQKLGPLTYREEEGEVFLGRSVTQRKDISDATNKEIDSEVR 554
Query: 671 ELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 717
+V+TAYT AKQ + HI+ LH +A+ LI+ ET+ GE + + GK
Sbjct: 555 RIVDTAYTTAKQTLEEHIEQLHLMAKALIKYETI-GEAQIKEILAGK 600
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
Identities = 251/467 (53%), Positives = 337/467 (72%)
Query: 251 FGRSKSK--FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
FG+S++K +++P+T TFADVAG D+A EL E+ DFL+NP +Y ALGAKIPKG LL
Sbjct: 145 FGKSRAKQLSKDMPKT--TFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLY 202
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
GPPGTGKTLLARAVAGEAGVPFF+ + S+FVE+FVGVGASRVRDLFE+AK +PCI+F+D
Sbjct: 203 GPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVD 262
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV +DEREQT+NQLL EMDGF +GVI++AATNRPD+LD ALLRPG
Sbjct: 263 EIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPG 322
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQ+ V PD+AGR +L+VHS+GK +A D D + +++RT G TGADL N++NEAA+L
Sbjct: 323 RFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALL 382
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AR + I+ + +A++R+I GP +K ++S+++KK+ AYHE GH L MP+ +P+
Sbjct: 383 TARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPI 442
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K++I+ RG+ GG P E++ GL +RS + Q+ A+GGR AEE++F E TTG
Sbjct: 443 YKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFREP--TTG 497
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
A +D Q +++AR MV FG S K+G V G G+PFLG+ M +Q DYS A +D E
Sbjct: 498 AVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEE 557
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 715
VR+L+E A+T A +I+T + D+L LA L+EKET+ E S+F D
Sbjct: 558 VRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 261/569 (45%), Positives = 377/569 (66%)
Query: 145 YSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVP-NDPDLIDILAMNGVDISVS 203
Y+ F+ V +G+++ +F+ +G + G R +P D L+D L V + +
Sbjct: 37 YTTFVKEVGQGQIQEAQFN-NGEITFMRRGGGSRYVTYMPVYDQKLLDDLINQDVKVQGT 95
Query: 204 EGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQEVPE 263
+ + L + + R+ Q M FG+SK++ +
Sbjct: 96 PPEEQSLLGTIFISWFPMILLIGVWIFFMRQMQGGGGKGA-----MSFGKSKARMMSEDQ 150
Query: 264 TGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
TF+DVAG D+AK +++E+VD+L++P ++ LG KIP G L+VGPPGTGKTLLA+A+A
Sbjct: 151 IKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIA 210
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
GEA VPFF+ + S+FVE+FVGVGASRVRD+FE+AK +PCI+FIDEIDAV
Sbjct: 211 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGG 270
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+DEREQT+NQ+L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV G
Sbjct: 271 GHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRG 330
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R +IL+VH R LA DV+ I+R TPGF+GADL NL+NEAA+ AAR + + +S E
Sbjct: 331 REQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFE 390
Query: 504 DALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT 563
A ++I+ G E+++ V+S+E K+ AYHEAGHA+VG L+PE+DPV K+SIIPRG+A G+T
Sbjct: 391 LAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRALGVT 450
Query: 564 FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQM 623
+ P ++R+ S+ +LE+ ++ GGR+AEE+I+G+E V+TGASND + + +AR+M
Sbjct: 451 MYLPEQDRVSM---SKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKM 507
Query: 624 VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQI 683
V ++GFS+K+G + G FLG+ ++ K S TA ++D EVR++++ Y RA+QI
Sbjct: 508 VTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQI 567
Query: 684 ITTHIDILHKLAQLLIEKETVDGEEFMSL 712
I ++DI+H + L++ ET+D + L
Sbjct: 568 IMDNMDIMHAMKDALMKYETIDAGQIDDL 596
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 261/569 (45%), Positives = 377/569 (66%)
Query: 145 YSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVP-NDPDLIDILAMNGVDISVS 203
Y+ F+ V +G+++ +F+ +G + G R +P D L+D L V + +
Sbjct: 37 YTTFVKEVGQGQIQEAQFN-NGEITFMRRGGGSRYVTYMPVYDQKLLDDLINQDVKVQGT 95
Query: 204 EGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQEVPE 263
+ + L + + R+ Q M FG+SK++ +
Sbjct: 96 PPEEQSLLGTIFISWFPMILLIGVWIFFMRQMQGGGGKGA-----MSFGKSKARMMSEDQ 150
Query: 264 TGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
TF+DVAG D+AK +++E+VD+L++P ++ LG KIP G L+VGPPGTGKTLLA+A+A
Sbjct: 151 IKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIA 210
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
GEA VPFF+ + S+FVE+FVGVGASRVRD+FE+AK +PCI+FIDEIDAV
Sbjct: 211 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGG 270
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+DEREQT+NQ+L EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V PDV G
Sbjct: 271 GHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRG 330
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R +IL+VH R LA DV+ I+R TPGF+GADL NL+NEAA+ AAR + + +S E
Sbjct: 331 REQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFE 390
Query: 504 DALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLT 563
A ++I+ G E+++ V+S+E K+ AYHEAGHA+VG L+PE+DPV K+SIIPRG+A G+T
Sbjct: 391 LAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRALGVT 450
Query: 564 FFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQM 623
+ P ++R+ S+ +LE+ ++ GGR+AEE+I+G+E V+TGASND + + +AR+M
Sbjct: 451 MYLPEQDRVSM---SKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKM 507
Query: 624 VERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQI 683
V ++GFS+K+G + G FLG+ ++ K S TA ++D EVR++++ Y RA+QI
Sbjct: 508 VTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQI 567
Query: 684 ITTHIDILHKLAQLLIEKETVDGEEFMSL 712
I ++DI+H + L++ ET+D + L
Sbjct: 568 IMDNMDIMHAMKDALMKYETIDAGQIDDL 596
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 247/466 (53%), Positives = 341/466 (73%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
+ FGRSK+K + + +TFA+VAG D+AK E+ EVV+FLK+ +K+ ALGA+IPKG LL+
Sbjct: 139 VSFGRSKAKLFNMDKPTITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLI 198
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
GPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF++AK APCI+FID
Sbjct: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFID 258
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV +DEREQT+NQ+L EMDGF ++ VIV+AATNRPD+LD ALLRPG
Sbjct: 259 EIDAVGRQRGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPG 318
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDR+V +D+PD+ GR IL++H++GK LA V+ E ++++T GF+GADL NL+NEAAIL
Sbjct: 319 RFDRRVVLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAIL 378
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR++ K + +++ ++++R+IAGPE+K+ +S ++K++ AYHE GH LV L+ DPV
Sbjct: 379 AARKNRKVVETEDLEESIDRVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGADPV 438
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
KISI+ RG G T P+E+R L +RS + MA L G VAEE+ F E ++TG
Sbjct: 439 HKISIVARGMTLGHTRQLPNEDRY---LMTRSQFKAMMAGLLAGYVAEELTFKE--LSTG 493
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
AS+D + + +A +MV +G S K+G G FLG+++S QKDY AD++D E
Sbjct: 494 ASDDLRRATDIAHKMVTSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKVADMIDEE 553
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFI 714
VR L+E A+ +AK I+T + + L +A+ L EKET++G E +LF+
Sbjct: 554 VRGLIEEAHQKAKTILTENKNRLKFIAEKLFEKETLEGAELENLFV 599
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 258/570 (45%), Positives = 368/570 (64%)
Query: 144 RYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVS 203
++SEFL+ V+KG+V+++ +G + G +LI +L N VD V+
Sbjct: 39 QFSEFLDLVEKGEVQKIVI--EGYDISGVLKSGTHFYTKATQYTELIPLLRKNNVDFQVA 96
Query: 204 EGDSGNGL-FSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQEVP 262
GDS GL F+ + + ++ Q M FG+SK++
Sbjct: 97 SGDSFLGLLFNILISWFPMLLLIGVWIFFMKQMQAGGNKT------MTFGKSKARLLSDR 150
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
VTF DVAG D+AK EL E+V+FL+ P K+ LG KIPKGCLL+GPPGTGKTLLA+A+
Sbjct: 151 SNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAI 210
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPFFS + S+FVE+FVGVGASRVRD+FE+ K APC++FIDEIDAV
Sbjct: 211 AGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFG 270
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
NDEREQT+NQLL EMDGF N GVI++AATNRPDVLD ALLRPGRFDRQ+T+ PD+A
Sbjct: 271 GGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIA 330
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 502
GR KIL+VH + A +V+ I+R TPGF+GADL NL+NE+A++AARR+ K ++ ++
Sbjct: 331 GRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDF 390
Query: 503 SDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL 562
A ++I+ G E+K+ V+ +E+K L AYHEAGHA+ + DP+ K +IIPRG+A GL
Sbjct: 391 EYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATIIPRGRALGL 450
Query: 563 TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQ 622
P +R+ ++R+ + + VA+GGR AE+VIFG++ T+GA++D Q + +AR
Sbjct: 451 VMRLPEHDRVS---FTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARS 507
Query: 623 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQ 682
MV ++G S+K+G + G Q + S+ ++++D+EV++LV A A +
Sbjct: 508 MVTKWGMSEKVGPLLYGE--------QNDPNNHILSIEMSNLIDSEVKQLVTDALKEATK 559
Query: 683 IITTHIDILHKLAQLLIEKETVDGEEFMSL 712
I+ +I+ LH++A+ L+E ET+ G+E L
Sbjct: 560 ILNENIESLHRVAKALLEYETLTGQELSDL 589
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 237/472 (50%), Positives = 332/472 (70%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
M FG+SK++ VTF DVAG D+AK EL E+V+FL+ P K+ LG KIPKGCLL+
Sbjct: 137 MTFGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLI 196
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
GPPGTGKTLLA+A+AGEA VPFFS + S+FVE+FVGVGASRVRD+FE+ K APC++FID
Sbjct: 197 GPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFID 256
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV NDEREQT+NQLL EMDGF N GVI++AATNRPDVLD ALLRPG
Sbjct: 257 EIDAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPG 316
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQ+T+ PD+AGR KIL+VH + A +V+ I+R TPGF+GADL NL+NE+A++
Sbjct: 317 RFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALI 376
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AARR+ K ++ ++ A ++I+ G E+K+ V+ +E+K L AYHEAGHA+ + DP+
Sbjct: 377 AARRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPI 436
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K +IIPRG+A GL P +R+ ++R+ + + VA+GGR AE+VIFG++ T+G
Sbjct: 437 HKATIIPRGRALGLVMRLPEHDRVS---FTRAKMHADLIVAMGGRAAEQVIFGDDKTTSG 493
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
A++D Q + +AR MV ++G S+K+G + G Q + S+ ++++D+E
Sbjct: 494 AASDIKQATHLARSMVTKWGMSEKVGPLLYGE--------QNDPNNHILSIEMSNLIDSE 545
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
V++LV A A +I+ +I+ LH++A+ L+E ET+ G+E L ++GK+ L
Sbjct: 546 VKQLVTDALKEATKILNENIESLHRVAKALLEYETLTGQELSDL-LEGKSFL 596
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 1233 (439.1 bits), Expect = 1.6e-125, P = 1.6e-125
Identities = 237/457 (51%), Positives = 328/457 (71%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
M FG+SK++ + TFADVAG D+AK ++ E+VD+L+ P ++ LG +IP G LLV
Sbjct: 134 MSFGKSKARQLSEEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLV 193
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
G PGTGKTLLA+A+AGEA VPFF+ + S+FVE+FVGVGASRVRD+FE+AK APCI+FID
Sbjct: 194 GQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFID 253
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV +DEREQT+NQ+L EMDGF GN GVIV+AATNRPDVLD ALLRPG
Sbjct: 254 EIDAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPG 313
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQVTV PD+ GR +IL+VH R L DV E I+R TPGF+GADL NL+NEAA+
Sbjct: 314 RFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALC 373
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR + +S E A ++I+ G E+K+ V+S+ ++++ AYHEAGHA++G L+P++DPV
Sbjct: 374 AARTARRVVSMKEFDAAKDKIMMGSERKSMVMSESEREMTAYHEAGHAIIGRLVPDHDPV 433
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K+SIIPRG+A G+T + P ++R +S+ +LE+ ++ GGRVAEEVI+G + V+TG
Sbjct: 434 YKVSIIPRGRALGVTMYLPEQDRFS---HSKQHLESNISSLYGGRVAEEVIYGSDKVSTG 490
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
ASND + + +AR+MV ++G S+K+G + G FLG+ + S TA +D E
Sbjct: 491 ASNDIERATNIARKMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSDETAKTIDEE 550
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVD 705
++ ++ Y RA+ +I ++D+LH + L++ ET+D
Sbjct: 551 IKSVISRNYQRAEDLIKANMDVLHAMKDCLMKYETID 587
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 265/581 (45%), Positives = 362/581 (62%)
Query: 132 SQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLID 191
S S + + YSEF++AV +G V +V DG ++ DGR I P D ++
Sbjct: 27 SGSGGTLQSQEKTYSEFVSAVDEGNVTKVIL--DGEQIRYRTSDGRDFVTIKPGDAEVTT 84
Query: 192 ILAMNGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDF 251
+L + + +E +G SF+ R Q M F
Sbjct: 85 LLIDKNIPVR-AEKQQQSGFQSFIITLLPFLLLIGVWVYFMNRMQGGGRGGA-----MGF 138
Query: 252 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
G+SK+K VTF DVAG D+AK EL+E+V+FL+NP K++ LG KIPKG LLVGPP
Sbjct: 139 GKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPP 198
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA+AGEAGVPFF+ + S+FVE+FVGVGASRVRD+FE+AK APCIVFIDEID
Sbjct: 199 GTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEID 258
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV NDEREQT+NQLL EMDGF N GVI+LAATNR DVLD ALLRPGRFD
Sbjct: 259 AVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFD 318
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R VTV PD+ GR KIL VH+R L DVD I+R TPGF+GADL NL+NEAA++AAR
Sbjct: 319 RNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAAR 378
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKI 551
+ ++ ++ +A ++++ G E+++ V++ ++K+ AYHEAGHA+VG +P DPV K
Sbjct: 379 VGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVYKA 438
Query: 552 SIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASN 611
+IIPRG A G+ P +RL + R + ++A+ + G+ AE + +GE++V+ G +
Sbjct: 439 TIIPRGGALGMVVSLPEMDRLN---WHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAG 495
Query: 612 DFMQVSRVARQMVERFGFSKKIGQV----AIGGPGGNPFLGQQMSSQKDYSMATADVVDA 667
D Q S++AR MV R+G S K+G + A G GN G +S+ T ++++
Sbjct: 496 DIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNT-AGFSVSAH------TKELIEE 548
Query: 668 EVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
EV+ ++ Y +A I+T + +LAQ L+E ET+ GEE
Sbjct: 549 EVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEE 589
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 265/581 (45%), Positives = 362/581 (62%)
Query: 132 SQSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLID 191
S S + + YSEF++AV +G V +V DG ++ DGR I P D ++
Sbjct: 27 SGSGGTLQSQEKTYSEFVSAVDEGNVTKVIL--DGEQIRYRTSDGRDFVTIKPGDAEVTT 84
Query: 192 ILAMNGVDISVSEGDSGNGLFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDF 251
+L + + +E +G SF+ R Q M F
Sbjct: 85 LLIDKNIPVR-AEKQQQSGFQSFIITLLPFLLLIGVWVYFMNRMQGGGRGGA-----MGF 138
Query: 252 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
G+SK+K VTF DVAG D+AK EL+E+V+FL+NP K++ LG KIPKG LLVGPP
Sbjct: 139 GKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPP 198
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA+AGEAGVPFF+ + S+FVE+FVGVGASRVRD+FE+AK APCIVFIDEID
Sbjct: 199 GTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEID 258
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV NDEREQT+NQLL EMDGF N GVI+LAATNR DVLD ALLRPGRFD
Sbjct: 259 AVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFD 318
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R VTV PD+ GR KIL VH+R L DVD I+R TPGF+GADL NL+NEAA++AAR
Sbjct: 319 RNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAAR 378
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKI 551
+ ++ ++ +A ++++ G E+++ V++ ++K+ AYHEAGHA+VG +P DPV K
Sbjct: 379 VGRRFVTMEDFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVYKA 438
Query: 552 SIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASN 611
+IIPRG A G+ P +RL + R + ++A+ + G+ AE + +GE++V+ G +
Sbjct: 439 TIIPRGGALGMVVSLPEMDRLN---WHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAG 495
Query: 612 DFMQVSRVARQMVERFGFSKKIGQV----AIGGPGGNPFLGQQMSSQKDYSMATADVVDA 667
D Q S++AR MV R+G S K+G + A G GN G +S+ T ++++
Sbjct: 496 DIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYSGNT-AGFSVSAH------TKELIEE 548
Query: 668 EVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
EV+ ++ Y +A I+T + +LAQ L+E ET+ GEE
Sbjct: 549 EVKRFIQQGYDQAHAILTERREDWDRLAQGLLEYETLTGEE 589
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1168 (416.2 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 236/471 (50%), Positives = 319/471 (67%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
M F +S+++ VTF DVAG ++AK EL E+VDFLK+ K+T LG KIPKGCLL+
Sbjct: 138 MGFSKSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLI 197
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
G PGTGKTLLARA+AGEA VPFFS + S+FVE+FVGVGASRVRD+FE+ K APCI+F+D
Sbjct: 198 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVD 257
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV NDEREQT+NQLL EMDGF N GV+++AATNRPDVLD ALLRPG
Sbjct: 258 EIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPG 317
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQVT+ PD+ GR KI+ VH++ LA DVD I+R TPGF+GADL NL+NEAA++
Sbjct: 318 RFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALI 377
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR D K ++ + A ++++ G E+K+ V+ +E+++L AYHEAGHA+V P DP+
Sbjct: 378 AARLDKKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPI 437
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K +IIPRG++ GL P +R+ ++R + + VA+GGR AEE+IFG VT+G
Sbjct: 438 HKATIIPRGRSLGLVMRLPETDRVS---HTREKMLADLTVAMGGRAAEELIFGYNKVTSG 494
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
AS+D Q + +A+ MV ++G S +G P + ++ S A+++D E
Sbjct: 495 ASSDIKQATDLAKSMVMKWGMSDSVG----------PLYHSDEAHER-ISTNLANLIDDE 543
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAE 719
V+ +V TA AK ++T H D LH +A L+E ET+ G++ + K E
Sbjct: 544 VKSIVSTALAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADIIAGKKLE 594
Score = 38 (18.4 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 YSEFLNAVKKGKVERVRFSK 164
+SEFL ++ G VE V ++
Sbjct: 41 FSEFLVRLEDGSVESVSITE 60
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1168 (416.2 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 236/471 (50%), Positives = 319/471 (67%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
M F +S+++ VTF DVAG ++AK EL E+VDFLK+ K+T LG KIPKGCLL+
Sbjct: 138 MGFSKSRARLMTDSRGKVTFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLI 197
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
G PGTGKTLLARA+AGEA VPFFS + S+FVE+FVGVGASRVRD+FE+ K APCI+F+D
Sbjct: 198 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVD 257
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV NDEREQT+NQLL EMDGF N GV+++AATNRPDVLD ALLRPG
Sbjct: 258 EIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPG 317
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQVT+ PD+ GR KI+ VH++ LA DVD I+R TPGF+GADL NL+NEAA++
Sbjct: 318 RFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALI 377
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR D K ++ + A ++++ G E+K+ V+ +E+++L AYHEAGHA+V P DP+
Sbjct: 378 AARLDKKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPI 437
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K +IIPRG++ GL P +R+ ++R + + VA+GGR AEE+IFG VT+G
Sbjct: 438 HKATIIPRGRSLGLVMRLPETDRVS---HTREKMLADLTVAMGGRAAEELIFGYNKVTSG 494
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
AS+D Q + +A+ MV ++G S +G P + ++ S A+++D E
Sbjct: 495 ASSDIKQATDLAKSMVMKWGMSDSVG----------PLYHSDEAHER-ISTNLANLIDDE 543
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAE 719
V+ +V TA AK ++T H D LH +A L+E ET+ G++ + K E
Sbjct: 544 VKSIVSTALAEAKDVLTKHSDALHAIAANLLEFETLTGDDIADIIAGKKLE 594
Score = 38 (18.4 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 145 YSEFLNAVKKGKVERVRFSK 164
+SEFL ++ G VE V ++
Sbjct: 41 FSEFLVRLEDGSVESVSITE 60
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1152 (410.6 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 234/469 (49%), Positives = 322/469 (68%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
++F +S++K VTF DVAG D+AK EL E+VDFLK+ ++ LG KIPKGCLL+
Sbjct: 136 INFSKSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
G PGTGKTLLARA+AGEA VPFFS + S+FVE+FVGVGASRVRD+FE+ K APCI+FID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV NDEREQT+NQLL EMDGF N GVI++AATNRPDVLDSALLRPG
Sbjct: 256 EIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPG 315
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQVT+ PD+ GR KI+ VH + A DV+ I+R TPGF+GADL NL+NEAA++
Sbjct: 316 RFDRQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALI 375
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR + K ++ + A ++++ G E+K+ ++++E+++L AYHEAGHA++ DP+
Sbjct: 376 AARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPI 435
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K +IIPRG++ GL P +R+ ++R + + VA+GGR AEE+IFG VT+G
Sbjct: 436 HKATIIPRGRSLGLVMRLPESDRVS---HTREKMIADLTVAMGGRAAEELIFGYHKVTSG 492
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
AS+D Q + +A+ MV ++G S K+G P L S A+++D E
Sbjct: 493 ASSDIKQATDLAKAMVMKWGMSDKVG----------P-LYHNDDKNDTISNNLANLIDEE 541
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 717
V+ +V +A RAK ++ H++ LH +A+ L+E ET+ GE+ ++ I+GK
Sbjct: 542 VKLIVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNI-INGK 589
Score = 54 (24.1 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 145 YSEFLNAVKKGKVERVRFS--------KDGSALQLTAV 174
+SEFLN + +VE + KDGS Q TA+
Sbjct: 39 FSEFLNKIDNNEVESINIGEHNITGKLKDGSKFQTTAI 76
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1152 (410.6 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 234/469 (49%), Positives = 322/469 (68%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
++F +S++K VTF DVAG D+AK EL E+VDFLK+ ++ LG KIPKGCLL+
Sbjct: 136 INFSKSRAKLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLI 195
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
G PGTGKTLLARA+AGEA VPFFS + S+FVE+FVGVGASRVRD+FE+ K APCI+FID
Sbjct: 196 GSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFID 255
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDAV NDEREQT+NQLL EMDGF N GVI++AATNRPDVLDSALLRPG
Sbjct: 256 EIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPG 315
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDRQVT+ PD+ GR KI+ VH + A DV+ I+R TPGF+GADL NL+NEAA++
Sbjct: 316 RFDRQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALI 375
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR + K ++ + A ++++ G E+K+ ++++E+++L AYHEAGHA++ DP+
Sbjct: 376 AARLNKKIVTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPI 435
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K +IIPRG++ GL P +R+ ++R + + VA+GGR AEE+IFG VT+G
Sbjct: 436 HKATIIPRGRSLGLVMRLPESDRVS---HTREKMIADLTVAMGGRAAEELIFGYHKVTSG 492
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
AS+D Q + +A+ MV ++G S K+G P L S A+++D E
Sbjct: 493 ASSDIKQATDLAKAMVMKWGMSDKVG----------P-LYHNDDKNDTISNNLANLIDEE 541
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 717
V+ +V +A RAK ++ H++ LH +A+ L+E ET+ GE+ ++ I+GK
Sbjct: 542 VKLIVTSALERAKSLLNEHLESLHIVAKNLLEFETLTGEDIKNI-INGK 589
Score = 54 (24.1 bits), Expect = 1.7e-120, Sum P(2) = 1.7e-120
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 145 YSEFLNAVKKGKVERVRFS--------KDGSALQLTAV 174
+SEFLN + +VE + KDGS Q TA+
Sbjct: 39 FSEFLNKIDNNEVESINIGEHNITGKLKDGSKFQTTAI 76
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 230/459 (50%), Positives = 319/459 (69%)
Query: 250 DFGRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
+F +S +K + + VTF DVAG + K+EL+E+VD+L++P K+ +G K+PKG LLV
Sbjct: 155 NFSKSGAKMYTPSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLV 214
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
GPPGTGKTLLARAVAGEA V F S +AS+F+E+FVGVGA RVRDLF AK AP I+FID
Sbjct: 215 GPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFID 274
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
E+DAV +DEREQT+NQLL+EMDGF + VIV+AATNRPDVLD ALLRPG
Sbjct: 275 ELDAVGRSRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPG 334
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDR V +DRPD R KIL VH+R L KDVD I+R TPG GADL+NL+NEAAIL
Sbjct: 335 RFDRHVVIDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAIL 394
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR + ++ + + A ++++ G E+K +++++K++ AYHEAGH +V L+P DPV
Sbjct: 395 AARENAATVTMEHMERAKDKVLMGGERK-MFITEQEKRITAYHEAGHTIVAKLLPGTDPV 453
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K++IIPRGQA G+T P ++R Y +SYL N+++VALGGR AE +FG+ ++TG
Sbjct: 454 HKVTIIPRGQALGVTQQLPEDDRYH---YPKSYLMNRLSVALGGRQAERAVFGD--LSTG 508
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
A ND V+ +A +MV ++G S KIG + +PFLG++++ +K +S A ++D E
Sbjct: 509 AQNDLKMVNDLAEKMVCQWGMSDKIGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQE 568
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGE 707
+ +++ A +A +I + L L L+E+ET+DG+
Sbjct: 569 IAAIIKEAEQKADNVIANNRGKLDALVDALMEEETLDGK 607
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 1104 (393.7 bits), Expect = 1.1e-114, Sum P(2) = 1.1e-114
Identities = 229/461 (49%), Positives = 321/461 (69%)
Query: 252 GRSKS-KFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+S + KF++ T V F+DVAG +AK+E++E V+FLKNP K+ +GAKIP+G +LVGP
Sbjct: 285 GKSTANKFEKSTST-VKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRGAILVGP 343
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTL+A+A AGEA VPF+S + S+FVE+FVGVG SRVRDLFE+A+ APCIVFIDEI
Sbjct: 344 PGTGKTLIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEI 403
Query: 371 DAVXXXXXXXXXX-XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
DAV NDERE T+NQLL EMDGF V+VLAATNRPD+LD ALLRPGR
Sbjct: 404 DAVGRARGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGR 463
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF-EKISRRTPGFTGADLQNLMNEAAIL 488
FDRQ+T+D PD+ R +I +VH L K +++ E++S+ TPGF+GAD+ N+ NEAA++
Sbjct: 464 FDRQITIDNPDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALI 523
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AARR + I+ + A++R+I G EKKN V+S +K+ VAYHEAGHA+V + P+
Sbjct: 524 AARRHAEIITLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHPL 583
Query: 549 AKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTT 607
K+SI+PRG A G + P E+ L++ + + + M +ALGGRVAE++ FG +TT
Sbjct: 584 LKVSIVPRGVAALGYAQYLPKEQFLQN----QEQIFDMMCMALGGRVAEQLTFG--TITT 637
Query: 608 GASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDA 667
GA +D +++++A V +G ++KIG ++ G + G ++ K YS TA+V+D
Sbjct: 638 GAQDDLEKITKMAYSQVSIYGMNEKIGPLSYQ-KGQD---GSDLT--KPYSEETAEVMDE 691
Query: 668 EVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
EVR+L+++AY R Q++ H + L +A LL+EKE + EE
Sbjct: 692 EVRKLLKSAYDRTTQVLQEHREGLISVANLLLEKEVIHFEE 732
Score = 47 (21.6 bits), Expect = 1.1e-114, Sum P(2) = 1.1e-114
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 139 EGSQWRYSEFLNAVKKGKVERVRFSKDGSA 168
EG++ ++SEFL+ + + K ++ + DG A
Sbjct: 169 EGNEIKFSEFLDELSENKPSKIVVT-DGYA 197
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 228/461 (49%), Positives = 311/461 (67%)
Query: 252 GRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+S++K F + + FADVAG D+AK E+ E V FLKNP Y LGAKIP+G +L GP
Sbjct: 278 GKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGP 337
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A AGEA VPF S + SEF+E+FVGVG SRVRDLF A+ APCI+FIDEI
Sbjct: 338 PGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEI 397
Query: 371 DAVXXXXXXXXXX-XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
DA+ NDERE T+NQLL EMDGF+ + ++V A TNRPDVLD ALLRPGR
Sbjct: 398 DAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGR 457
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAI 487
FDRQ+T+DRPD+ GR +I +VH + A ++D ++++ T GFTGAD+ N+ NE A+
Sbjct: 458 FDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGAL 517
Query: 488 LAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDP 547
+AAR + E+ A+ER+ AG EKK+ V+S E+K VA+HEAGHA+ G M DP
Sbjct: 518 IAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDP 577
Query: 548 VAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTT 607
+ K+SIIPR QA G + P ++ L SR + +QM +AL GRV+EE+ FG E +T+
Sbjct: 578 LLKVSIIPRAQALGYASYLPKDQYL----MSRGQILDQMGMALAGRVSEEIFFGPEKITS 633
Query: 608 GASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDA 667
GAS+DF +V+R+A+ V ++G S +G +A P + + + QK +S ATA ++D
Sbjct: 634 GASDDFQKVTRMAQAYVTQYGMSPTVGTIAY------P-IDTRETVQKPFSEATAQMIDE 686
Query: 668 EVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
E+R+LV+ AY R K+++ H L +AQ L++KE + E
Sbjct: 687 EIRKLVKHAYERTKKLLLEHKQGLENIAQRLLQKEVITYNE 727
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 1076 (383.8 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 221/454 (48%), Positives = 300/454 (66%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 303 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT 362
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 363 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 422
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD AL+RPGRFDRQ+ + PD+
Sbjct: 423 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIK 482
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R L ++ EK++R+ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 483 GRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 542
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 543 QKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK 602
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y+R L ++M + LGGRV+EE+ FG +TTGA +D +V++
Sbjct: 603 GLGYAQYLPREQYL----YTREQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQ 656
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 657 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARLIDDEVRILINDAYK 711
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A LL+EKE +D + + L
Sbjct: 712 RTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 745
Score = 51 (23.0 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 ASSISNPLLTSNFFGSQILISPPTPKTRRLSVSFPFPSRTKRTTQATAILRKELEPNNAS 61
A + N LLT Q L S P PK FP K+T++ ++ ++ EP A+
Sbjct: 48 AKTSRNSLLTDVIAAYQRLCSRP-PKG--FEKYFPNGKNGKKTSEPKEVMGEKKEPKPAA 104
Query: 62 SEAAS 66
+ S
Sbjct: 105 APRPS 109
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 1083 (386.3 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 228/466 (48%), Positives = 311/466 (66%)
Query: 251 FGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
FG+S ++ + V FADVAG ++AK+E+ E V+FLKNP +Y LGAKIPKG +L GP
Sbjct: 275 FGQSTARVINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGP 334
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A AGEA VPF + + SEF+E+FVGVG +RVRD+F A+ +PCI+FIDEI
Sbjct: 335 PGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEI 394
Query: 371 DAVXXXXXXXXXXX-NDEREQTINQLLTEMDGFSGN-SGVIVLAATNRPDVLDSALLRPG 428
DAV + E+E T+NQLL EMDGF+ + S VIV+AATNR D+LDSALLRPG
Sbjct: 395 DAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPG 454
Query: 429 RFDRQVTVDRPDVAGRVKILQVH--SRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAA 486
RFDRQ+ V PD+ GR I +VH +L K V K++ TPGF+GAD+ N+ NEAA
Sbjct: 455 RFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAA 514
Query: 487 ILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYD 546
++AAR EIS A+ER++AG EKK V+ E+KK VAYHEAGHA+ G + D
Sbjct: 515 LIAARDANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHAD 574
Query: 547 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVT 606
P+ K+SIIPRG+ G + P E+ L YS+ L ++M + LGGRVAEE+ FG +T
Sbjct: 575 PLLKVSIIPRGKGLGYAQYLPKEQYL----YSKDQLLDRMCMTLGGRVAEEIFFGR--IT 628
Query: 607 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD 666
TGA +D +V+++A V +FG S+K+G ++ P P G+ M+ K YS ATA ++D
Sbjct: 629 TGAQDDLQKVTQMAYSQVVKFGMSEKVGPLSFETPA--P--GE-MAFDKPYSEATAQLID 683
Query: 667 AEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
EVR+LV A R + ++ + ++A L+EKE ++ E+ + L
Sbjct: 684 QEVRDLVMNALRRTRDLLLEKRSDIERVALRLLEKEILNREDMIEL 729
Score = 40 (19.1 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 267 TFADVAGADQAKLELQEVVDFLKNPDKY 294
+F+ VA D++ L+ QEV+ L ++
Sbjct: 32 SFSAVAKDDKSVLKQQEVLHLLAKDQRF 59
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 641 (230.7 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 131/224 (58%), Positives = 160/224 (71%)
Query: 252 GRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+SK+K F + E + F DVAG D++K E+ E V FL++P KY LGAKIP+G +L GP
Sbjct: 269 GKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGP 328
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A AGEAGVPF S + SEFVE+FVGVGASRVRDLF+ A+ AP I+F+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 371 DAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 430
DA+ NDERE T+NQLL EMDGF V+VLA TNRPD+LD ALLRPGRF
Sbjct: 389 DAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRF 448
Query: 431 DRQVTVDRPDVAGRVKILQVH-SRGK--------ALAKDVDFEK 465
DR +++D PDV GR +I +VH ++ K A KDVDF K
Sbjct: 449 DRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSK 492
Score = 476 (172.6 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 99/259 (38%), Positives = 160/259 (61%)
Query: 459 KDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 514
K+ + EK++ R TPGF GAD+ N NE A++AAR D + A+ER+IAG E
Sbjct: 497 KNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLE 556
Query: 515 KKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLE 573
KK+ ++S E+KK VAYHEAGHA+ G + DP+ K+SIIPRGQ G + P ++ L
Sbjct: 557 KKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPKDQYLT 616
Query: 574 SGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKI 633
S + +++M + LGGRV+EE+ F + VT+GAS+DF +++++A+QM+ + G S K+
Sbjct: 617 S----QEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQMAQQMILKLGMSDKL 670
Query: 634 GQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHK 693
GQ+ N G +YS TA ++D EV+ L++ +Y +++T +D++ K
Sbjct: 671 GQICYDTSSDN---GNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDK 727
Query: 694 LAQLLIEKETVDGEEFMSL 712
+A+ L +KE + E+ + +
Sbjct: 728 VAEELFKKEVLTREDMIKI 746
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 641 (230.7 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 131/224 (58%), Positives = 160/224 (71%)
Query: 252 GRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+SK+K F + E + F DVAG D++K E+ E V FL++P KY LGAKIP+G +L GP
Sbjct: 269 GKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGP 328
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A AGEAGVPF S + SEFVE+FVGVGASRVRDLF+ A+ AP I+F+DEI
Sbjct: 329 PGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEI 388
Query: 371 DAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 430
DA+ NDERE T+NQLL EMDGF V+VLA TNRPD+LD ALLRPGRF
Sbjct: 389 DAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRF 448
Query: 431 DRQVTVDRPDVAGRVKILQVH-SRGK--------ALAKDVDFEK 465
DR +++D PDV GR +I +VH ++ K A KDVDF K
Sbjct: 449 DRHISIDVPDVEGRKQIFKVHLNKLKLKSVQDIDAKQKDVDFSK 492
Score = 476 (172.6 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 99/259 (38%), Positives = 160/259 (61%)
Query: 459 KDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPE 514
K+ + EK++ R TPGF GAD+ N NE A++AAR D + A+ER+IAG E
Sbjct: 497 KNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDTYHFEQAIERVIAGLE 556
Query: 515 KKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLE 573
KK+ ++S E+KK VAYHEAGHA+ G + DP+ K+SIIPRGQ G + P ++ L
Sbjct: 557 KKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPKDQYLT 616
Query: 574 SGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKI 633
S + +++M + LGGRV+EE+ F + VT+GAS+DF +++++A+QM+ + G S K+
Sbjct: 617 S----QEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQMAQQMILKLGMSDKL 670
Query: 634 GQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHK 693
GQ+ N G +YS TA ++D EV+ L++ +Y +++T +D++ K
Sbjct: 671 GQICYDTSSDN---GNGFKVHHNYSETTARIIDEEVKRLIDESYEACHKLLTEKLDLVDK 727
Query: 694 LAQLLIEKETVDGEEFMSL 712
+A+ L +KE + E+ + +
Sbjct: 728 VAEELFKKEVLTREDMIKI 746
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 1066 (380.3 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 219/451 (48%), Positives = 301/451 (66%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
V FADVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A AGE
Sbjct: 297 VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 356
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VPF + SEF+E+FVGVG +RVRD+F A+ APCI+FIDEIDA+
Sbjct: 357 ANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQ 416
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
E+E T+NQ+L EMDGF+ ++ V+VLA TNRPD+LD AL RPGRFDRQ+ + PD+ GR
Sbjct: 417 SEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRS 476
Query: 446 KILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
I +VH R +L+KD K++ TPGFTGAD+ N+ NEAA++AAR + +
Sbjct: 477 SIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERH 536
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 561
A+ER+I G EKK V+ +K VAYHEAGHA+VG + DP+ K+SIIPRG+ G
Sbjct: 537 FEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLG 596
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
+ P E+ L Y+R L ++M + LGGRVAE++ FG+ +TTGA +D +V++ A
Sbjct: 597 YAQYLPREQFL----YTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRKVTQSAY 650
Query: 622 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAK 681
+ +FG S+K+GQV+ P G+ M +K YS ATA ++D EVR LV +AY R
Sbjct: 651 AQIVQFGMSEKLGQVSFDFPRQ----GETMV-EKPYSEATAQLIDEEVRCLVRSAYNRTL 705
Query: 682 QIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+++T + + K+ + L+EKE ++ + + L
Sbjct: 706 ELLTQCREQVEKVGRRLLEKEVLEKADMIEL 736
Score = 44 (20.5 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 163 SKDGSALQLTAVDGRRATVIVPNDPDLIDIL--AMNGVDISVSEGDSGNGLFSFVG 216
+ + + T DG +VP L+ IL AM + G G GLFS VG
Sbjct: 231 TNQAAVVYTTESDGSFLRSLVPTLV-LVSILLYAMRRGPMGTGRGGRGGGLFS-VG 284
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 1063 (379.3 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 218/451 (48%), Positives = 300/451 (66%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
V FADVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A AGE
Sbjct: 269 VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGE 328
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VPF + SEF+E+FVGVG +RVRD+F A+ APCI+FIDEIDA+
Sbjct: 329 AKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQ 388
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
E+E T+NQ+L EMDGF+ + V+VLA TNRPD+LD AL RPGRFDRQ+ + PD+ GR
Sbjct: 389 SEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRS 448
Query: 446 KILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
I +VH R ++L +D K++ TPGFTGAD+ N+ NEAA++AAR + +
Sbjct: 449 SIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERH 508
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 561
A+ER+I G EKK V+ +K VAYHEAGHA+VG + DP+ K+SIIPRG+ G
Sbjct: 509 FEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLG 568
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
+ P E+ L Y+R L ++M + LGGRVAE++ FG+ +TTGA +D +V++ A
Sbjct: 569 YAQYLPREQYL----YTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRKVTQSAY 622
Query: 622 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAK 681
+ +FG S+K+GQV+ P G+ M +K YS ATA ++D EVR LV +AY R
Sbjct: 623 AQIVQFGMSEKLGQVSFDFPRQ----GETMV-EKPYSEATAQLIDEEVRCLVRSAYNRTL 677
Query: 682 QIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+++T + + K+ + L+EKE ++ + + L
Sbjct: 678 ELLTQCREQVEKVGRRLLEKEVLEKADMIEL 708
Score = 46 (21.3 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 19/52 (36%), Positives = 23/52 (44%)
Query: 167 SALQLTAVDGRRATVIVPNDPDLIDIL--AMNGVDISVSEGDSGNGLFSFVG 216
S + T DG +VP L+ IL AM + G G GLFS VG
Sbjct: 207 SVVYTTESDGSLLRSLVPTLV-LVGILLYAMKRGPMGTGRGGRGGGLFS-VG 256
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 221/454 (48%), Positives = 302/454 (66%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 297 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT 356
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 357 AGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNF 416
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V+VLA TNRPD+LD AL+RPGRFDRQ+ + PD+
Sbjct: 417 GGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIK 476
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R L ++D E ++R+ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 477 GRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDAIN 536
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 537 QKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK 596
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++
Sbjct: 597 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLKKVTQ 650
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQV+ P ++ +K YS ATA ++D EVR L+ TAY
Sbjct: 651 SAYAQIVQFGMNEKVGQVSFDLPRQG-----ELVLEKPYSEATARLIDTEVRNLISTAYE 705
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R +Q+++ + K+A L+EKE +D + + L
Sbjct: 706 RTQQLLSDKKPEVEKVALRLLEKEVLDKNDMVEL 739
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 220/454 (48%), Positives = 300/454 (66%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 303 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT 362
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 363 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 422
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD AL+RPGRFDRQ+ + PD+
Sbjct: 423 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIK 482
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R L ++ EK++R+ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 483 GRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 542
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 543 QKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK 602
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++
Sbjct: 603 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQ 656
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 657 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARLIDDEVRILINDAYK 711
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A LL+EKE +D + + L
Sbjct: 712 RTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 745
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 220/454 (48%), Positives = 300/454 (66%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 302 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT 361
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 362 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 421
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+
Sbjct: 422 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 481
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R L ++ +K++R+ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 482 GRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 541
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 542 QKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK 601
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++
Sbjct: 602 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQ 655
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 656 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARLIDDEVRILINDAYK 710
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A LL+EKE +D + + L
Sbjct: 711 RTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 744
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 222/454 (48%), Positives = 298/454 (65%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 301 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT 360
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 361 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 420
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+
Sbjct: 421 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 480
Query: 443 GRVKILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R AL KD K++ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 481 GRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAIN 540
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 541 EKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK 600
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++
Sbjct: 601 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQ 654
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 655 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARMIDDEVRILISDAYR 709
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A LL+EKE +D + + L
Sbjct: 710 RTVALLTEKKADVEKVALLLLEKEVLDKNDMVQL 743
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 222/454 (48%), Positives = 298/454 (65%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 301 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT 360
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 361 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 420
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+
Sbjct: 421 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK 480
Query: 443 GRVKILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R AL KD K++ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 481 GRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAIN 540
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 541 EKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK 600
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+EE+ FG +TTGA +D +V++
Sbjct: 601 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRKVTQ 654
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 655 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARMIDDEVRILISEAYK 709
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A LL+EKE +D + + L
Sbjct: 710 RTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 743
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 217/462 (46%), Positives = 314/462 (67%)
Query: 253 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 312
+SKSK + T TF DVAG D+AK E+ E V FLK+P +Y LGA+IPKG +L GPPG
Sbjct: 339 KSKSKAVKATST-TTFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGPPG 397
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLA+A AGEAGV F++ + S+F+E+FVGVG SRVRDLF++A++ PCIVFIDEIDA
Sbjct: 398 TGKTLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDA 457
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
V NDERE T+NQLL EMDGFS SGV+V A TNR DVLD ALLRPGRFDR
Sbjct: 458 VGRARSRGGFH-NDERENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDR 516
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVD--FEKISRRTPGFTGADLQNLMNEAAILAA 490
Q+ V +PD+ GR I VH + L +++ +K++ TPGF+GAD+ N+ NE A++AA
Sbjct: 517 QIYVGKPDIKGRKDIFMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAA 576
Query: 491 RRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAK 550
R+D + D +A+ER++ G +++N V+S E++ +VA+HEAGHA+VG + DP+ K
Sbjct: 577 RKDATSANFDHFEEAIERVLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLK 636
Query: 551 ISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGAS 610
+SI+PRG G FA + + + LY+R L +++ V+LGGR+AE +IF + ++TGA
Sbjct: 637 VSIVPRGS--GTLGFAQYQPK-DQYLYTREQLFDRICVSLGGRIAESIIF--DRISTGAM 691
Query: 611 NDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVR 670
+D +V+++A V +G S+K+G + G + ++ K YS ATA ++D E+R
Sbjct: 692 DDLDKVTKMASASVVNYGMSEKVGVASFRKEGDD------ITVVKPYSQATARMIDEEIR 745
Query: 671 ELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+V AY++ Q++ ++L KLA +L+EKE + ++ ++
Sbjct: 746 RMVNDAYSKTTQLLHEKKELLIKLATILLEKEVIQRDDLRTI 787
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 1068 (381.0 bits), Expect = 4.9e-108, P = 4.9e-108
Identities = 225/467 (48%), Positives = 311/467 (66%)
Query: 252 GRSKSKFQEV-P--ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLV 308
G+ +EV P ++ F+DV G D+AK EL+E+V +L++P ++T LG K+PKG LLV
Sbjct: 207 GKGLGLHEEVQPSMDSSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLV 266
Query: 309 GPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFID 368
GPPGTGKT+LARA+AGEAGVPFFSC+ SEF E+FVGVGA RVRDLF AK +PCI+FID
Sbjct: 267 GPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFID 326
Query: 369 EIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
EIDA+ + T+NQ+L E+DGF N G+IV+AATN P+ LD AL+RPG
Sbjct: 327 EIDAIGGSRNPKD---QQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPG 383
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAIL 488
RFDR + V PDV GR +IL+ H A+DVD I+R TPGF+GADL NL+N AA+
Sbjct: 384 RFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALK 443
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AA K+++ ++ A +RI+ G E+K+AV+SDE +KL A+HE GHALV PV
Sbjct: 444 AAMDGSKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPV 503
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K +I+PRG A G+ P ++ E+ + SR + ++ V +GGRVAEE+IFGE VT+G
Sbjct: 504 HKATIVPRGMALGMVSQLPDKD--ETSI-SRKQMLARLDVCMGGRVAEELIFGESEVTSG 560
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAE 668
AS+D Q +++AR MV +FG SK++G VA G+ MS++ T ++++E
Sbjct: 561 ASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDN----GKSMSTE------TRLLIESE 610
Query: 669 VRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 715
V++L+E AY AK I+T + LH LA L++ ET+ G++ L D
Sbjct: 611 VKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD 657
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 217/454 (47%), Positives = 297/454 (65%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 302 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKAT 361
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 362 AGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 421
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD AL+RPGRFDRQ+ + PD+
Sbjct: 422 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIK 481
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R L +D + ++R+ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 482 GRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAIN 541
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 542 QKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK 601
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+E++ FG +TTGA +D +V++
Sbjct: 602 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEQIFFGR--ITTGAQDDLKKVTQ 655
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 656 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARMIDEEVRSLINIAYD 710
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A L+EKE +D + + L
Sbjct: 711 RTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDL 744
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 217/454 (47%), Positives = 297/454 (65%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG +L GPPGTGKTLLA+A
Sbjct: 146 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKAT 205
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 206 AGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 265
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD AL+RPGRFDRQ+ + PD+
Sbjct: 266 GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIK 325
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEIS 498
GR I +VH R L +D + ++R+ TPGF+GAD+ N+ NEAA++AAR I+
Sbjct: 326 GRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDAIN 385
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ 558
+ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+
Sbjct: 386 QKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK 445
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
G + P E+ L Y++ L ++M + LGGRV+E++ FG +TTGA +D +V++
Sbjct: 446 GLGYAQYLPKEQYL----YTKEQLLDRMCMTLGGRVSEQIFFGR--ITTGAQDDLKKVTQ 499
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYT 678
A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ AY
Sbjct: 500 SAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARMIDEEVRSLINIAYD 554
Query: 679 RAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
R ++T + K+A L+EKE +D + + L
Sbjct: 555 RTLSLLTEKKAEVEKVALRLLEKEVLDKSDMVDL 588
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 250/574 (43%), Positives = 340/574 (59%)
Query: 145 YSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVP---NDPDLIDILAMNGVDIS 201
YSE ++ G++ +V + + A+ TV NDP+L+ +L +
Sbjct: 62 YSELKKLIESGQINQVSIGQT----TIKAISSSHNTVYTAKKVNDPELVSLLDSKNIAYG 117
Query: 202 V-SEGDSGNG-LFSFVGNXXXXXXXXXXXXXXXRRAQXXXXXXXXXXXXMDFGRSKSKFQ 259
SE + LFS+V R Q + G SK K
Sbjct: 118 AYSETNWFTDILFSWV---LPVFIFFGIWMFLASRMQKNMGSSI-----LGIGSSK-KLV 168
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
+ V F+DVAG ++AK E++E+VDFLK P++Y LGAKIPKG LLVGPPGTGKTLLA
Sbjct: 169 NSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLA 228
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
+AVAGEA VPFFS + S F+E+FVGVGASRVRDLFE AK +AP IVFIDEIDA+
Sbjct: 229 KAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAA 288
Query: 380 XXXXX-NDEREQTINQLLTEMDGFSGNSG-VIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
NDEREQT+NQLL EMDGF S VIVLAATNRP+VLD+ALLRPGRFDRQV VD
Sbjct: 289 SGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVD 348
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
+PD GR IL+VH + ++ V E I+R T G GADL N++NEAA+LA R K +
Sbjct: 349 KPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYV 408
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRG 557
++++ +A+ER IAG EKK+ +++++KK+V YHE GHAL+ V+K+S+IPRG
Sbjct: 409 EQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVSVIPRG 468
Query: 558 QAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQV 616
A G T P E + L + L ++ V LGGR AEEV GE ++TGASND +
Sbjct: 469 LAALGYTLNTPEENKF---LMQKHELIAEVDVLLGGRAAEEVFIGE--ISTGASNDLERA 523
Query: 617 SRVARQMVERFGFSKKIGQVAIGGPGGNPFL--GQQMSSQKDYSMATADVVDAEVRELVE 674
+ + + M+ +G S+ G + + N FL GQ + KDYS A+ +D V++ ++
Sbjct: 524 TDIIKAMISMYGMSEIAGLMVLEKQR-NTFLSGGQTI---KDYSEKMAESLDDYVKKTLD 579
Query: 675 TAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
Y K + T+ + + L E+ET++G +
Sbjct: 580 ERYKDVKDTLNTYKGAIETMVAALYEEETIEGNK 613
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 219/465 (47%), Positives = 303/465 (65%)
Query: 253 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 312
+S +K E GV F DVAG ++AK+E+ E V+FLKNP +Y LGAKIPKG +L GPPG
Sbjct: 312 QSTAKLTNPNEIGVGFKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPG 371
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLA+A AGEA VPF + + SEF+E+FVGVG SRVRD+F A+ APCI+FIDEIDA
Sbjct: 372 TGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDA 431
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
V + E+E T+NQLL EMDGF+ + V+VLAATNR D+LD AL+RPGRFDR
Sbjct: 432 VGRKRGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDR 491
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAIL 488
Q+ V PD+ GR I +VH G L +D ++SR+ TPGFTGAD+ N+ NEAA++
Sbjct: 492 QIYVPAPDIKGRASIFKVHL-GN-LKTSLDKNELSRKMAALTPGFTGADIANVCNEAALI 549
Query: 489 AARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPV 548
AAR I A+ER+IAG EKK V++ E+K+ VA+HEAGHA+ G + DP+
Sbjct: 550 AARDSKDSIVLKHFEQAIERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPL 609
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
K+SIIPRG+ G + P + L S+ L ++M + LGGRVAEE+ F +TTG
Sbjct: 610 LKVSIIPRGKGLGYAQYLPKDHYL----LSKEQLFDRMCMTLGGRVAEELFFNR--ITTG 663
Query: 609 ASNDFMQVSRVARQMVERFGFSKKIGQVAIG-GPGGNPFLGQQMSSQKDYSMATADVVDA 667
A +D +++ +A V RFG ++K+GQV+ G G+P K YS TA ++D
Sbjct: 664 AQDDLKKITDIAYSQVVRFGMNEKVGQVSFDVGQAGDPVFS------KPYSEDTAQLIDN 717
Query: 668 EVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
EVR +++ A+ ++T H + + K+A+ L++ E + ++ + L
Sbjct: 718 EVRSIIKCAHEATTSLLTKHKENVQKVAERLLQNEVLSRDDMIEL 762
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 220/456 (48%), Positives = 302/456 (66%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
+ GV FADVAG ++AKLE+ E V+FLKNP +Y LGAKIPKG LL GPPGTGKTLLA+A
Sbjct: 297 DIGVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKAT 356
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEAGVPF + SEF+E+FVGVG +RVRD+F A+ APCI+F+DEIDA+
Sbjct: 357 AGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHF 416
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
E+E T+NQLL EMDGF+ + V+VLA TNRPDVLD AL+RPGRFDRQ+ + PD+
Sbjct: 417 GGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIK 476
Query: 443 GRVKILQVHSR----GKALAKDVDFEKISRRTPGFTG--ADLQNLMNEAAILAARRDLKE 496
GR I +VH R ++L+KD K++ TPGFTG AD+ N+ NEAA++AAR
Sbjct: 477 GRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARHLNPS 536
Query: 497 ISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR 556
+ + A+ER+I G EKK V+ +K VAYHEAGHA+VG + DP+ K+SI+PR
Sbjct: 537 VGEKHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHADPLLKVSIVPR 596
Query: 557 GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQV 616
G+ G P E+ L Y+R L ++M LGGRVAE++ FG VTTGA +D +V
Sbjct: 597 GKGLGYAQCLPREQYL----YTREQLFDRMCAMLGGRVAEQLFFGR--VTTGAQDDLRKV 650
Query: 617 SRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETA 676
++ A + +FG S+K+GQV+ P P G+ + +K +S ATA ++D EVR L+ +A
Sbjct: 651 TQSAYAQIVQFGMSEKLGQVSFDLP--RP--GEALV-EKPFSEATAQLIDEEVRRLIGSA 705
Query: 677 YTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+ R ++T + + K+ + L+EKE ++ + + L
Sbjct: 706 HARTLDLLTRCREQVDKVGRRLLEKEVLERADMVEL 741
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 217/468 (46%), Positives = 314/468 (67%)
Query: 252 GRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+S+++ F + + F+DVAG D+AK+E+ E V FLK+P+++ LGAKIP+G +L GP
Sbjct: 384 GKSRARRFNHETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPRGAILSGP 443
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A AGE+GVPFFS + SEFVE+FVGVG SRVRDLF A+ PCI+FIDEI
Sbjct: 444 PGTGKTLLAKATAGESGVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEI 503
Query: 371 DAVXXXXXXXXXXX-NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
DA+ NDERE T+NQ+LTEMDGF+ + V+VLA TNRPDVLD AL+RPGR
Sbjct: 504 DAIGKSRSAKNFSGGNDERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGR 563
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAI 487
FDR +++DRP + GR +I +VH + +D+D+ ++S TPGF GAD+ N +NEAA+
Sbjct: 564 FDRHISIDRPTMDGRKQIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADIANCVNEAAL 623
Query: 488 LAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDP 547
+AAR + + ++ A+ER++ G EKK+ V+S E+K+ VAYHEAGHA+ G DP
Sbjct: 624 VAARENAESVTMKHFERAIERVVGGLEKKSLVLSPEEKRTVAYHEAGHAICGWYFRWADP 683
Query: 548 VAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVT 606
+ K+SIIPRGQ G + P+ ++ L + + + ++MA+ LGGRV+EE+ F + VT
Sbjct: 684 LLKVSIIPRGQGALGYAQYLPANG--DTYLMTANQMMDRMAMTLGGRVSEELHF--DTVT 739
Query: 607 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQ--KDYSMATADV 664
+GAS+DF +V+R+A MV +FG S K+ + + + SSQ K +S TA
Sbjct: 740 SGASDDFNKVTRLATAMVTKFGMSPKLKYI---------YYEEDPSSQLHKPFSEETAKD 790
Query: 665 VDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+D EVR +V AY + + ++T + +A+ L+ KE + ++ + L
Sbjct: 791 IDIEVRRIVNEAYKQCRDLLTAKKKEVGLVAEELLAKEVLSRDDMVRL 838
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 1033 (368.7 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 218/469 (46%), Positives = 305/469 (65%)
Query: 251 FGRSKSK---FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLL 307
FG S+SK F + + F DVAG D+AK E+ E V FLK P +Y +GAKIP+G +L
Sbjct: 327 FGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAIL 386
Query: 308 VGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFI 367
GPPGTGKTLLA+A AGEAGVPF+ + SEFVE+FVGVGA+RVRDLF+ A+ AP IVFI
Sbjct: 387 SGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFI 446
Query: 368 DEIDAVXXXXXXXXXX-XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 426
DEIDA+ NDERE T+NQ+L EMDGF+ V+VLA TNRPD+LD ALLR
Sbjct: 447 DEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLR 506
Query: 427 PGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDV-DFE-KISRRTPGFTGADLQNLMNE 484
PGRFDR + +D+P++ GR I VH LA ++ D + +++ TPGF+GAD+ N+ NE
Sbjct: 507 PGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNE 566
Query: 485 AAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPE 544
AA++AAR D + + A+ER+I G E+K+ ++S E+KK+VAYHEAGHA+ G +
Sbjct: 567 AALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKY 626
Query: 545 YDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 603
DP+ K+SIIPRGQ G + P + L + L+++M ++LGGRV+EE+ F
Sbjct: 627 ADPLLKVSIIPRGQGALGYAQYLPGD----IFLLTEQQLKDRMTMSLGGRVSEELHF--P 680
Query: 604 NVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATAD 663
+VT+GAS+DF +V+ +A MV G S KIG V N K +S T D
Sbjct: 681 SVTSGASDDFKKVTSMATAMVTELGMSDKIGWV-------NYQKRDDSDLTKPFSDETGD 733
Query: 664 VVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++D+EV +V+ + R +++ + + K+AQ+L++KE + E+ + L
Sbjct: 734 IIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDL 782
Score = 39 (18.8 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 52 RKELEPNNASSEAASKR 68
RKE E N S+A S R
Sbjct: 123 RKEKEEENGPSKAKSNR 139
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 223/471 (47%), Positives = 313/471 (66%)
Query: 249 MDFGRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLL 307
M FG+S +K F + + + F DVAG +AK E+ E V FL+NP+KY LGAKIP+G +L
Sbjct: 352 MGFGKSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAIL 411
Query: 308 VGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFI 367
GPPGTGKTLLA+A AGEAGVPF+S + SEFVE+FVGVGASRVRDLF+ A+ AP IVF+
Sbjct: 412 SGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFV 471
Query: 368 DEIDAVXXXXXXXXXX-XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLR 426
DEIDA+ NDERE T+NQLL EMDGF + V+VLA TNRPD+LD AL+R
Sbjct: 472 DEIDAIGKQRSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMR 531
Query: 427 PGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFE---KISRRTPGFTGADLQNLMN 483
PGRFDR V +D P++ GR +I VH + L KD+D + +++ TPGF+GAD+ N+ N
Sbjct: 532 PGRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCN 591
Query: 484 EAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMP 543
EAA++AAR + + ++ A+ER+I G EKK+ +++ E++K+VAYHEAGHA+ G +
Sbjct: 592 EAALIAARYNAEFVTLRHFELAIERVIGGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLK 651
Query: 544 EYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 602
P+ K+SIIPRGQ G + P ++ L S L L ++M + LGGRV+EE+ F
Sbjct: 652 YAHPLLKVSIIPRGQGALGYAQYLPPDQYLMSTLQ----LYDRMIMTLGGRVSEELHFA- 706
Query: 603 ENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPF-LGQQMSSQKDYSMAT 661
+VT+GA +DF +V+ +A+ MV RFG SK +G V N + Q K +S T
Sbjct: 707 -SVTSGAHDDFKKVTGIAQSMVLRFGMSKTVGMV-------NYYDTRSQDDLTKPFSDET 758
Query: 662 ADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+ ++D+EV+ +V Y + KQ++T + +AQ L++KE + E+ + L
Sbjct: 759 SRIIDSEVQRIVSDCYQKCKQLLTEKSKEVELVAQELLKKEFITREDMIRL 809
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 226/471 (47%), Positives = 308/471 (65%)
Query: 252 GRSKSK-FQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+S++K F + + ++F +VAG D+AK E+ E V FLKNP KYT LGAKIP+G +L GP
Sbjct: 270 GKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGP 329
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A AGEA VPF S + SEFVE+FVGVGASRVRDLF +A+S AP I+FIDEI
Sbjct: 330 PGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEI 389
Query: 371 DAVXXXXXXXXXX--XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG 428
DA+ NDERE T+NQLL EMDGF+ + V+VLA TNRPDVLD+AL+RPG
Sbjct: 390 DAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPG 449
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSR----GKALAKDVD--FEKISRRTPGFTGADLQNLM 482
RFDR + +D PDV GR +I VH + L D++ K++ TPGFTGAD+ N
Sbjct: 450 RFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANAC 509
Query: 483 NEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALM 542
NEAA++AAR + I+ A+ER+IAG EKK V+S E+K+ VAYHEAGHA+ G +
Sbjct: 510 NEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFL 569
Query: 543 PEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 601
DP+ K+SIIPRGQ G + P ++ L S ++M +ALGGRV+EE+ F
Sbjct: 570 KYADPLLKVSIIPRGQGALGYAQYLPPDQYL----ISEEQFRHRMIMALGGRVSEELHF- 624
Query: 602 EENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMAT 661
+VT+GA +DF +V+++A MV G S KIG ++ GN K +S T
Sbjct: 625 -PSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN------FKVNKPFSNKT 677
Query: 662 ADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
A +D EV+ +V+ A+ +++T ++D + +A+ L+ KE + E+ + L
Sbjct: 678 ARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRL 728
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 1020 (364.1 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 231/454 (50%), Positives = 295/454 (64%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
ET +TFADVAG D+AK EL+E+V+FL+NP+KY LGA+ P+G LLVG PGTGKTLLA+AV
Sbjct: 320 ET-ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAV 378
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV
Sbjct: 379 AGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFR 438
Query: 383 X-XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 441
NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR VTV+ PD
Sbjct: 439 MGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDK 498
Query: 442 AGRVKILQVHSRGKAL--AKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISK 499
GR IL+VH K L DV+ I+ T GFTGADL NL+NEAA+LA R++ + K
Sbjct: 499 IGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEK 558
Query: 500 DEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA----LMPEYDPVAKISIIP 555
+ A+ER IAG EKK+A + +K +VA HEAGHA+VG L+ V K+SI+P
Sbjct: 559 IDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILP 618
Query: 556 R-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFM 614
R G A G T+ P+ E + L L ++ LGGR AEEV++ ++TGA +D
Sbjct: 619 RTGGALGFTYIPPTSE--DRYLLFIDELLGRLVTLLGGRAAEEVVYSGR-ISTGAFDDIR 675
Query: 615 QVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVE 674
+ + +A + V +G ++KIG V++ G S D+V EV L++
Sbjct: 676 RATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQ 735
Query: 675 TAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
+A A ++ + D+L L L EKE V+GEE
Sbjct: 736 SALDVALSVVRANPDVLEGLGAQLEEKEKVEGEE 769
Score = 622 (224.0 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 154/357 (43%), Positives = 208/357 (58%)
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR VTV+ PD GR
Sbjct: 442 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGR 501
Query: 445 VKILQVHSRGKAL--AKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 502
IL+VH K L DV+ I+ T GFTGADL NL+NEAA+LA R++ + K +
Sbjct: 502 ESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDF 561
Query: 503 SDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA----LMPEYDPVAKISIIPR-G 557
A+ER IAG EKK+A + +K +VA HEAGHA+VG L+ V K+SI+PR G
Sbjct: 562 IQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTG 621
Query: 558 QAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVS 617
A G T+ P+ E + L L ++ LGGR AEEV++ ++TGA +D + +
Sbjct: 622 GALGFTYIPPTSE--DRYLLFIDELLGRLVTLLGGRAAEEVVYSGR-ISTGAFDDIRRAT 678
Query: 618 RVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAY 677
+A + V +G ++KIG V++ G S D+V EV L+++A
Sbjct: 679 DMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSAL 738
Query: 678 TRAKQIITTHIDILHKLAQLLIEKETVDGEEF------------MSLFIDGKAELFV 722
A ++ + D+L L L EKE V+GEE +++F++GK EL +
Sbjct: 739 DVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVEGKQELLL 795
Score = 43 (20.2 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 145 YSEFLNAVKKGKVERV 160
YSEFL+ V +V++V
Sbjct: 179 YSEFLSKVNSNQVQKV 194
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 1014 (362.0 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 208/455 (45%), Positives = 302/455 (66%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV F DVAG +AK E++E VD+LK+P+KY LGAK+P+G LL+GPPG GKTLLA+AVA
Sbjct: 337 GVLFRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVAT 396
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF S SEF+E+ G+GA+RVRDLF++ K +APCI++IDEIDA+
Sbjct: 397 EAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMG 456
Query: 384 --XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 441
+ E EQT+NQLL EMDG + GV++LA+TNR D+LD ALLRPGRFDR + +D P +
Sbjct: 457 QGSSGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTL 516
Query: 442 AGRVKILQVH-SRGKALAKDVDF-EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISK 499
A R +I + H S K + F ++++R TPGF+GAD+ N+ NEAA+ AAR E+S
Sbjct: 517 AERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSS 576
Query: 500 DEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ- 558
+ A+ER++ G EK++ +S ++K++AYHE+GHALVG ++P D + K++I+PR
Sbjct: 577 KNLEYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSL 636
Query: 559 AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSR 618
A G + PSE+ L YS+ L ++M +ALGGR AE ++F +TTGA ND +V++
Sbjct: 637 ALGFAQYTPSEQHL----YSKEELFDKMCMALGGRAAENLVFNR--ITTGAQNDLEKVTK 690
Query: 619 VARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSS-QKDYSMATADVVDAEVRELVETAY 677
+A +++FG + +G + + G S +K +S A ++D E R +V +AY
Sbjct: 691 IAYSQIKKFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAY 750
Query: 678 TRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+ I+TTH D L KLA+ L+EKET+D ++ + L
Sbjct: 751 QTTEGILTTHRDKLEKLAEALLEKETLDYDQVVQL 785
Score = 45 (20.9 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 45 TQATAILRKELEPNNASSEAASKRRTVTTEATM 77
T ++ I +PN S+E K R+V T+A +
Sbjct: 139 TSSSTIGEPGEDPNKNSNENDEKMRSVLTKAVL 171
Score = 37 (18.1 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 25 TPKTRRLSVSFPFPSRTKRTTQATAILRKELEPNNASSEA 64
TPK RL S K T + K +P S++A
Sbjct: 67 TPKEVRLMHLRSLSSTAKPPTASDGKTEKHEQPEKGSAKA 106
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 209/450 (46%), Positives = 300/450 (66%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
+ F DVAG D+AK E+ E V FLKNP KY LGAKIPKG LLVGPPGTGKTLLA+A AGE
Sbjct: 319 IYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 378
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
+GVPF S + S+F+E+FVGVG SRVR LF++A+ AP I+FIDEIDA+ N
Sbjct: 379 SGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGN 438
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
DERE T+NQLL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR
Sbjct: 439 DERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRD 498
Query: 446 KILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
+I +++ + L + + ++++ TPGF GAD+ N+ NEAA++AAR + ++
Sbjct: 499 QIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFE 558
Query: 504 DALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GL 562
A++R+I G EKKN V+S +++ VAYHE+GHA+VG + +P+ K++I+PRG A G
Sbjct: 559 SAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGF 618
Query: 563 TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQ 622
+ P+E L ++ L + + LGGR AE+V+ G+ ++TGA ND +V+++
Sbjct: 619 AQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLIGK--ISTGAQNDLEKVTKMTYA 672
Query: 623 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQ 682
V +GFS K+G ++ P + G S K YS T ++D EVR+ V AY R +
Sbjct: 673 QVAVYGFSDKVGLLSFP-PRDD---GYDFS--KPYSNKTGAIIDEEVRDWVAKAYERTVE 726
Query: 683 IITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++ H + ++A+LL+EKE + ++ + +
Sbjct: 727 LVEEHKVKVAEIAELLLEKEVLHQDDLLKI 756
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 1014 (362.0 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 229/456 (50%), Positives = 297/456 (65%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
ET +TFADVAG D+AK EL+E+V+FLKNPD+Y LGA+ P+G LLVG PGTGKTLLA+AV
Sbjct: 324 ET-ITFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAV 382
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGE+ VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV
Sbjct: 383 AGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFR 442
Query: 383 X-XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 441
NDEREQT+NQLLTEMDGF +S VIVL ATNR DVLD AL RPGRFDR VTV+ PD
Sbjct: 443 MVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDK 502
Query: 442 AGRVKILQVHSRGKAL--AKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISK 499
GR IL+VH K L DV+ I+ T GFTGADL NL+NEAA+LA R+ + K
Sbjct: 503 VGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDK 562
Query: 500 DEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVG----ALMPEYDPVAKISIIP 555
+ A+ER IAG EKK A + +K +VA HEAGHA+VG +L+ V K+SI+P
Sbjct: 563 IDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILP 622
Query: 556 R-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFM 614
R G A G T+ P+ E + L L ++ LGGR AEEV++ ++TGA +D
Sbjct: 623 RSGGALGFTYIPPTHE--DRYLLFIDELHGRLVTLLGGRAAEEVVYSGR-ISTGALDDIR 679
Query: 615 QVSRVARQMVERFGFSKKIGQVAIG--GPGGNPFLGQQMSSQKDYSMATADVVDAEVREL 672
+ + +A + V +G ++KIG V++ GG G + + D+V EV L
Sbjct: 680 RATDMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGHLV--DLVQREVTNL 737
Query: 673 VETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
+++A A ++ + D+L L L ++E V+GEE
Sbjct: 738 LQSALDVALTVVRANPDVLEGLGAQLEDEEKVEGEE 773
Score = 39 (18.8 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 145 YSEFLNAVKKGKVERV 160
YS+FL+ V +V++V
Sbjct: 178 YSDFLSKVNNDEVQKV 193
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 223/469 (47%), Positives = 311/469 (66%)
Query: 252 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
G ++ Q +T V F+DV G D+AK ELQE+V+FL NP+++++LG K+PKG LLVGPP
Sbjct: 299 GPHSNEAQPEHQT-VRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPP 357
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARAVAGEAGVPFF + SEF E++VGVGA RVR+LF +A+SK+P I+FIDE+D
Sbjct: 358 GTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELD 417
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ +QT+NQLLTE+DGFS ++GVI+LAATN P++LD AL RPGRFD
Sbjct: 418 AIGAKRNERDAAYV---KQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFD 474
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R+V VD PDV GR+ IL+ H + ++ DVD I+R T GF+GADL+NL+N+AAI A+R
Sbjct: 475 RKVVVDLPDVRGRMDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASR 534
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKI 551
+++ + A ++II G E ++ ++ D+ K L AYHEAGHALV P P+ KI
Sbjct: 535 NKQSKVTPKDFDYAKDKIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLYKI 594
Query: 552 SIIPRGQAGGLTFFAPSEERLESGLYSRSYLE--NQMAVALGGRVAEEVIFGEENVTTGA 609
+I+PRG + G T F P E + S++Y++ + + V++GG+VAEE+I+GE+ VT+G
Sbjct: 595 TIMPRGMSLGSTHFLP-----EMDMVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVTSGI 649
Query: 610 SNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEV 669
S D +R A +V RFG+SKK+G V + ++ S T ++AEV
Sbjct: 650 SADLASATRTAFTLVTRFGYSKKLGNVDL------------YANYDSLSSETKQEIEAEV 697
Query: 670 RELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKA 718
R LVE A RA I+T L L + LI+ ET+ EE M + G++
Sbjct: 698 RRLVEEARQRATNILTERRHELELLTKALIKYETLTKEE-MEKVLRGES 745
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 208/447 (46%), Positives = 296/447 (66%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
+ F DVAG ++AK E+ E V FL+NP KY LGAKIPKG LLVGPPGTGKTLLA+A AGE
Sbjct: 324 IYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 383
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX- 384
+ VPF S + S+F+E+FVGVG SRVR+LF++A+ AP I+FIDEIDA+
Sbjct: 384 SAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGG 443
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR
Sbjct: 444 NDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGR 503
Query: 445 VKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 502
+I Q++ + L + + ++++ TPGF GAD+ N+ NEAA++AAR + ++
Sbjct: 504 DQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHF 563
Query: 503 SDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-G 561
A++R+I G EKKN V+S +++ VAYHE+GHA+ G + +P+ K++I+PRG A G
Sbjct: 564 DSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALG 623
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
+ P+E L ++ L + + LGGR AE+V+ G ++TGA ND +V+++
Sbjct: 624 FAQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLIGR--ISTGAQNDLEKVTKMTY 677
Query: 622 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAK 681
V +GFS KIG ++ P + S K YS T ++D EVRE V AY R
Sbjct: 678 AQVAVYGFSDKIGLLSF------PQREDEFS--KPYSNRTGAMIDEEVREWVGKAYKRTV 729
Query: 682 QIITTHIDILHKLAQLLIEKETVDGEE 708
++I H + + ++A+LL+EKE + ++
Sbjct: 730 ELIEEHKEQVAQIAELLLEKEVLHQDD 756
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 213/465 (45%), Positives = 301/465 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 268 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 327
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 328 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 387
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 388 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 445
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + K VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 446 VPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 505
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 506 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 565
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 566 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 622
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 623 ATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILLRE 669
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
+Y RAK I+ TH LA+ L+ ET+D +E + K E+
Sbjct: 670 SYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV 714
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 213/465 (45%), Positives = 301/465 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 268 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 327
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 328 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 387
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 388 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 445
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + K VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 446 VPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 505
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 506 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 565
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 566 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 622
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 623 ATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILLRE 669
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
+Y RAK I+ TH LA+ L+ ET+D +E + K E+
Sbjct: 670 SYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV 714
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 212/465 (45%), Positives = 301/465 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 302 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 361
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 362 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 421
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 422 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 479
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 480 VPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 539
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 540 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 599
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 600 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 656
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 657 ATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILLRD 703
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
+Y RAK I+ TH LA+ L+ ET+D +E + K E+
Sbjct: 704 SYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV 748
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 212/465 (45%), Positives = 301/465 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 321 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 380
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 381 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 440
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 441 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 498
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 499 VPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 558
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 559 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 618
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 619 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 675
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 676 ATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILLRD 722
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
+Y RAK I+ TH LA+ L+ ET+D +E + K E+
Sbjct: 723 SYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV 767
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 212/465 (45%), Positives = 301/465 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 326 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGK 385
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 386 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 445
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 446 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 503
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 504 VPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 563
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 564 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 623
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 624 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 680
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 681 ATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILLRD 727
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
+Y RAK I+ TH LA+ L+ ET+D +E + K E+
Sbjct: 728 SYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV 772
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 212/464 (45%), Positives = 303/464 (65%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 268 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 327
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 328 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 387
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 388 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 445
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 446 VPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 505
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 506 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 565
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG--ASNDF 613
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTG AS+DF
Sbjct: 566 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDF 622
Query: 614 MQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELV 673
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 623 DNATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILL 669
Query: 674 ETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 717
+Y RAK I+ TH LA+ L+ ET+D +E + + ++GK
Sbjct: 670 RDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 712
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 215/456 (47%), Positives = 292/456 (64%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPK-GCLLVGPPGTGKTLLARA 321
E V F DVAG ++AKLE+ E V+FLKNP +Y LGAKIPK G +L GPPGTGKTLLA+A
Sbjct: 93 EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKA 152
Query: 322 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXX 381
AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV
Sbjct: 153 TAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGN 212
Query: 382 XXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 441
E+E T+NQLL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+
Sbjct: 213 FGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDI 272
Query: 442 AGRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEI 497
GR I +VH R L ++ EK++R+ TPGF+GAD+ N+ NEAA++AAR I
Sbjct: 273 KGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSI 332
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRG 557
++ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG
Sbjct: 333 NQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG 392
Query: 558 QAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVA-EEVIFGEENVTTGASNDFMQV 616
+ G + P E+ L Y++ L ++M + G + FG +TTGA +D +V
Sbjct: 393 KGLGYAQYLPKEQYL----YTKEQLLDRMCMTPGWPCGPRKSSFGR--ITTGAQDD-RKV 445
Query: 617 SRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETA 676
++ A + +FG ++K+GQ++ P M +K YS ATA ++D EVR L+ A
Sbjct: 446 TQSAYAQIVQFGMNEKVGQISFDLPRQG-----DMVLEKPYSEATARLIDDEVRILINDA 500
Query: 677 YTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
Y R ++T + K+A LL+EKE +D + L
Sbjct: 501 YKRTVALLTEKKADVEKVALLLLEKEVLDKNNMVEL 536
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 212/465 (45%), Positives = 299/465 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 268 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 327
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 328 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 387
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTI QLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 388 KRIEFPM--HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 445
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + K VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 446 VPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 505
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 506 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 565
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 566 RGPTLGHVSLLPENDRWNE---IRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 622
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A++MV +FG S+K+G + G ++S + T ++ E+R L+
Sbjct: 623 ATKIAKRMVTKFGMSEKLGVMTYSDTG-------KLSPE------TQSAIEQEIRILLRE 669
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
+Y RAK I+ TH LA+ L+ ET+D +E + K E+
Sbjct: 670 SYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLEV 714
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 212/453 (46%), Positives = 304/453 (67%)
Query: 259 QEV-PE-TGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
QEV PE VTF DV G D+AKLE++E+VD+LK+P+KY+ LG ++PKG LLVGPPGTGKT
Sbjct: 236 QEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKT 295
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
LLARA+AGEA VPFF A SEF E+ VG GA RVRDLF+KAK++APCI+FIDEID+V
Sbjct: 296 LLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSK 355
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
+ QTINQLL+EMDGF+ N G+IV+AATNR D LD ALLRPGRFD +VTV
Sbjct: 356 RVSNSI--HPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTV 413
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
+PD+AGRV I + + +D + +++ + GFTGAD++N++N+AA+ AA + E
Sbjct: 414 PKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVE 473
Query: 497 ISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ + +A +R++ GP + + DE+ + AYHEAGH LV + P+ K++IIP
Sbjct: 474 VTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIP 533
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RGQ+ G T P ++ + +++ + + V +GGRVAEE+IFG++ VTTGA++D +
Sbjct: 534 RGQSLGHTAMLPEKDSYQ---LTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSK 590
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A QMV+ FG S K+G L ++S D + TA+++DAE+ +++
Sbjct: 591 ATQLAVQMVKVFGMSDKVGLRDFTAQDNESAL-VKVS---DLAPQTAELIDAEINRVLQE 646
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
+Y RAK I+ T LA+ L+E ET+ +E
Sbjct: 647 SYKRAKVILETKKKEHQLLAEALLEYETLSADE 679
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 211/453 (46%), Positives = 293/453 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FL+NP K+T LG K+PKG LLVGPPGTGK
Sbjct: 275 SAVDPVQMKNVTFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGK 334
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK APC++FIDE+D+V
Sbjct: 335 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGG 394
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 395 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 452
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + + + V+ E I+R T GF+GA+L+NL+N+AA+ AA
Sbjct: 453 VPRPDVKGRTEILKWYLKKIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKD 512
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ A ++I+ GPE+++A + K++ AYHE+GHA++ + P+ K +I+P
Sbjct: 513 MVTMKELEFAKDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMP 572
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG EN+TTGAS+DF
Sbjct: 573 RGPTLGHVSMLPENDRWSE---TRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDS 629
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A+ MV RFG S+K+G + ++ Q S T ++ EVR L+
Sbjct: 630 ATKIAKMMVTRFGMSEKLGVMTYS----------DLTKQ---SPETQAAIEHEVRILLRD 676
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
+Y RAK ++ + LA+ L+ ET+D +E
Sbjct: 677 SYERAKALLKSRAKEHRNLAEALLRYETLDAKE 709
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 208/454 (45%), Positives = 301/454 (66%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
+ F ++AG D++KLEL EVVDF+KN +KY +GA++PKG LLVGPPG+GKT+LARAVA E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VP+ + EF+E++VG GA R+R LF A+S AP IVFIDEIDA+
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 386 DERE--QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+RE QT+NQLL EMDGFS ++V+ ATNR D LDSALLRPGRFDR V V PD+ G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 444 RVKILQVHSRG-KALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 502
R KIL+++ + K+ K D EKI+R TPGF+GADL+N++NEA ILA R + ++ +E+
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 503 SDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA-LMPEYDPVAKISIIPRGQAGG 561
+A +++ GPE+K+ SD ++++ AYHEAGHA+V L P+ DP+ K +II RG A G
Sbjct: 386 YEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALG 445
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
P ++R Y +S +E ++AV +GGR AEE++FG+ ++GAS+D + + +A
Sbjct: 446 YVEQIPVDDRHN---YFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAY 502
Query: 622 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAK 681
+MV +G S K+G + G+ + ++S+Q T ++ EV+ LVE + ++
Sbjct: 503 KMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQ------TVSSIEVEVKSLVEKGKSLSE 556
Query: 682 QIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 715
+I+ H L LA L++KET+ GEE ++ ID
Sbjct: 557 EILRRHRKELDNLAFALLDKETLSGEEIKNI-ID 589
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 208/454 (45%), Positives = 301/454 (66%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
+ F ++AG D++KLEL EVVDF+KN +KY +GA++PKG LLVGPPG+GKT+LARAVA E
Sbjct: 146 IRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATE 205
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VP+ + EF+E++VG GA R+R LF A+S AP IVFIDEIDA+
Sbjct: 206 ANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSSGSVNGA 265
Query: 386 DERE--QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+RE QT+NQLL EMDGFS ++V+ ATNR D LDSALLRPGRFDR V V PD+ G
Sbjct: 266 GQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDING 325
Query: 444 RVKILQVHSRG-KALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 502
R KIL+++ + K+ K D EKI+R TPGF+GADL+N++NEA ILA R + ++ +E+
Sbjct: 326 RKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINEL 385
Query: 503 SDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA-LMPEYDPVAKISIIPRGQAGG 561
+A +++ GPE+K+ SD ++++ AYHEAGHA+V L P+ DP+ K +II RG A G
Sbjct: 386 YEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALG 445
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
P ++R Y +S +E ++AV +GGR AEE++FG+ ++GAS+D + + +A
Sbjct: 446 YVEQIPVDDRHN---YFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRATEIAY 502
Query: 622 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAK 681
+MV +G S K+G + G+ + ++S+Q T ++ EV+ LVE + ++
Sbjct: 503 KMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQ------TVSSIEVEVKSLVEKGKSLSE 556
Query: 682 QIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 715
+I+ H L LA L++KET+ GEE ++ ID
Sbjct: 557 EILRRHRKELDNLAFALLDKETLSGEEIKNI-ID 589
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 969 (346.2 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 203/452 (44%), Positives = 292/452 (64%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
K +V +T V F DV G D+A+ EL+E+VDFLK+P KY +LG K+PKG LL GPPGTGKT
Sbjct: 269 KSVDVAKTNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKT 328
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
LLARA AGEAGV FF + SEF E++VGVGA R+RDLF +A+S+AP I+FIDE+DA+
Sbjct: 329 LLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGK 388
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
+QT+NQLL E+DGFS SG+I++ ATN P+ LD AL RPGRFD+ V V
Sbjct: 389 RNPKDQAY---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNV 445
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
D PDV GR IL+ H + LA +VD I+R TPG +GA+L NL+N+AA+ A +++
Sbjct: 446 DLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVS 505
Query: 497 ISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR 556
+ A ++I+ G E+K V++D +K A+HEAGHA++ P+ K +I+PR
Sbjct: 506 VDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPR 565
Query: 557 GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQV 616
G+A G+TF P ++++ ++ + ++ V +GG++AEE+I+G++N T+G +D
Sbjct: 566 GRALGITFQLPEMDKVD---ITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSA 622
Query: 617 SRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETA 676
+ AR MV ++G S +G V N L + S +S D+ D EV EL++ +
Sbjct: 623 TGTARAMVTQYGMSDDVGPV-------N--LSENWES---WSNKIRDIADNEVIELLKDS 670
Query: 677 YTRAKQIITTHIDILHKLAQLLIEKETVDGEE 708
RA++++T LH+LAQ LIE ET+D E
Sbjct: 671 EERARRLLTKKNVELHRLAQGLIEYETLDAHE 702
Score = 38 (18.4 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 36 PFPSRTK-RTTQATAILRKELEPNNASSEAASKRRTVTTEATMAALLLSSIAPQ 88
P PS T +T QA + + EA + +A LLL S PQ
Sbjct: 83 PPPSNTNDKTKQANVAVSHAMLATR-EQEANKDLTSPDAQAAFYKLLLQSNYPQ 135
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 208/450 (46%), Positives = 289/450 (64%)
Query: 263 ETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAV 322
E VTF DV G D+AK EL+EVV+FLK+P+K++ LG K+PKG LLVGPPGTGKTLLARAV
Sbjct: 294 EINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAV 353
Query: 323 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXX 382
AGEA VPFF A EF E+ VG GA RVRDLF+ AK++APC++FIDEID+V
Sbjct: 354 AGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVL 413
Query: 383 XXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVA 442
+ QTINQLL+EMDGF N+GVIVL ATNR D LD ALLRPGRFD +V V PD
Sbjct: 414 --HPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFT 471
Query: 443 GRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 502
GR +IL ++ K L ++D + ++R T GFTGADL+N++N+AA+ AA + +S +
Sbjct: 472 GRKEILSLYLT-KILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHL 530
Query: 503 SDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGL 562
A ++++ GPE+K + +E + AYHE GHA+V E P+ K++I+PRG + G
Sbjct: 531 ETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPRGPSLGH 590
Query: 563 TFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQ 622
T + P +ER +++ L M +GGR AEE++FG + +T+GAS+D Q + +A
Sbjct: 591 TAYIPEKERYH---VTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIATH 647
Query: 623 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQ 682
MV +G S K+G I G LG + T + VDAE++ ++ +Y RAK
Sbjct: 648 MVRDWGMSDKVGLRTIEASKG---LG----TGDTLGPNTIEAVDAEIKRILSDSYERAKA 700
Query: 683 IITTHIDILHKLAQLLIEKETVDGEEFMSL 712
I+ H LA+ L++ ET+D ++ ++
Sbjct: 701 ILRKHTREHKALAEALLKYETLDADDIKAI 730
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 207/452 (45%), Positives = 295/452 (65%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
G+ F DVAG +AK+E++E VD+LKNPD+Y LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 278 GIGFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 337
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A SEFVE+ G+GA+RVR LF +A+++APCIV+IDEIDAV
Sbjct: 338 EAQVPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGF 397
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR DVLD+AL+RPGR DR + +D P +
Sbjct: 398 ANAEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQE 457
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R +I + H +G L +D F + ++ TPGF+GAD+ N+ NEAA+ AAR K I
Sbjct: 458 RREIFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFN 517
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG- 560
A+ER+IAG K+N ++S E++K+VA+HE+GHALVG L+ + V K+SI PR A
Sbjct: 518 FEYAVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 577
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G P E+ L +++ L +M +ALGGRV+E + F + VTTGA +D +V+++A
Sbjct: 578 GFAQILPREQYL----FTKEQLLERMCMALGGRVSEAITFNK--VTTGAQDDLKRVTKIA 631
Query: 621 RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRA 680
MV+++G IGQ++ P G +G ++ +S ++D E + LV AY R
Sbjct: 632 YSMVKQYGMVPSIGQISF--PDGESTVG---IGRRPFSQGLQQMMDHEAKVLVAQAYRRT 686
Query: 681 KQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++++ + D L L+ L+EKE ++ ++ +L
Sbjct: 687 EKLLLDNRDKLQTLSNALLEKEVINYDDIEAL 718
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 202/378 (53%), Positives = 263/378 (69%)
Query: 262 PETGV-TFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLAR 320
PE V TF DV G D AK EL+EVV++LKNP K+T LG K+PKG LL G PGTGKTLLA+
Sbjct: 354 PEKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 413
Query: 321 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXX 380
A+AGEAGVPFF A SEF E+FVGVGA RVR LF+ AK KAPCI+FIDEIDAV
Sbjct: 414 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 473
Query: 381 XXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 440
++T++QLL EMDGF N G+IV+AATN PD+LD AL RPGRFDR + V PD
Sbjct: 474 ----EGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPD 529
Query: 441 VAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKD 500
V GR +IL+++ +GK +++DVD + I+R TPGF GADL NL+N AAI AA +++S +
Sbjct: 530 VRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSE 589
Query: 501 EISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG 560
++ A +RI+ G E+K VS++ KKL AYHE+GHA+V P+ K +I+PRG A
Sbjct: 590 QLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSAL 649
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G+ PS + E+ + R L ++ V +GGRVAEE+IFG +++TTGAS+D Q + +A
Sbjct: 650 GMVTQLPSND--ETSVSKRQLLA-RLDVCMGGRVAEELIFGLDHITTGASSDLSQATELA 706
Query: 621 RQMVERFGFSKKIGQVAI 638
+ MV G S+ IG V I
Sbjct: 707 QYMVSSCGMSEAIGPVHI 724
Score = 192 (72.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 51/137 (37%), Positives = 75/137 (54%)
Query: 578 SRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVA 637
S+ L ++ V +GGRVAEE+IFG +++TTGAS+D Q + +A+ MV G S+ IG V
Sbjct: 664 SKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIGPVH 723
Query: 638 IGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQL 697
I P M S+ +DAEV +L+ AY R K ++ H LH LA
Sbjct: 724 IKE---RP--SSDMQSR----------IDAEVVKLLREAYERVKSLLKRHEKQLHTLANA 768
Query: 698 LIEKETVDGEEFMSLFI 714
L+E ET+ E+ + +
Sbjct: 769 LLEYETLTAEDIKRILL 785
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 207/452 (45%), Positives = 293/452 (64%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AKLE++E VD+LK+P+++ LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 305 GVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSGF 424
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLAATNR D+LD+ALLRPGR DR V +D P +
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R +I + H + L + F ++++ TPGF+GAD+ N+ NEAA+ AAR +
Sbjct: 485 RKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTSN 544
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG- 560
+ A+ER++AG KK+ V+S E++K+VA+HE+GHALVG L+ + V K+SI PR A
Sbjct: 545 LDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNAAL 604
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G P ++ L ++R L +M +ALGGR +E + F VT+GA +D +V+R+A
Sbjct: 605 GFAQMLPRDQHL----FTREQLFERMCMALGGRASESISFNR--VTSGAQDDLRKVTRIA 658
Query: 621 RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRA 680
MV++FG + IG V+ P G ++ +S ++D E R LV TAY
Sbjct: 659 YSMVKQFGMAPSIGPVSF--PEAQE--GVTGIGRRPFSQGLQQMIDHEARLLVATAYRHT 714
Query: 681 KQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+Q++ ++D LH LA L+EKE ++ E+ +L
Sbjct: 715 EQVLRDNLDKLHALASALLEKEVINYEDIEAL 746
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 205/457 (44%), Positives = 293/457 (64%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V +TF V G ++AK ELQ+VV+FL+NP K+T LG K+PKG LLVGPPGTGK
Sbjct: 282 SSVDPVQMKNITFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGK 341
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF++AK+ APC++FIDE+D+V
Sbjct: 342 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGG 401
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVIV+ ATN + LD+AL+RPGRFD QVT
Sbjct: 402 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVT 459
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V PDV GR +IL+ + + + +D E I+R T GF+GA+L+NL+N+AA+ AA
Sbjct: 460 VPIPDVKGRTEILEWYLKKIKVDSAIDAEIIARGTVGFSGAELENLVNQAALKAAADGKD 519
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ A ++I+ GPE+++ + K + AYHE+GHA+V + P+ K +I+P
Sbjct: 520 LVTMKELKFAKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKATIMP 579
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG + G P +R +R+ L QM V++GGRVAEE++FG + +T+GAS+DF
Sbjct: 580 RGPSLGHVSLLPENDRWSE---TRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDG 636
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVET 675
+++A+ MV RFG S K+G + S +S T V+ E+R L+++
Sbjct: 637 ATKIAQMMVTRFGMSDKLGVMTY-------------SDLTKHSPETRAAVEQEIRVLLQS 683
Query: 676 AYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+Y RAK+I+ T+ LA L+ ET++ +E +
Sbjct: 684 SYERAKKILKTYSKEHKLLADALLTYETLNAKEIQMI 720
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 949 (339.1 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 203/452 (44%), Positives = 290/452 (64%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AK+E++E VD+LKNPD+Y LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 296 GVSFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVAT 355
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A SEFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 356 EAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGF 415
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR D+LD+AL+RPGR DR + +D P +
Sbjct: 416 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQE 475
Query: 444 RVKILQVHSRGKALAKDVDFE--KISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R +I + H + L + DF +++ TPGF+GAD+ N+ NEAA+ AAR K I
Sbjct: 476 RKEIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTFS 535
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG- 560
A+ER+IAG KK+ ++S E++++VA+HE+GHALVG L+ + V K+SI PR A
Sbjct: 536 FEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 595
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G P ++ L +++ L +M +ALGGR +E + F + VTTGA +D +V+RVA
Sbjct: 596 GFAQILPRDQFL----FTKEQLFERMCMALGGRASEAITFNK--VTTGAQDDLRKVTRVA 649
Query: 621 RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRA 680
MV+++G +GQV+ P Q ++ +S +D E + L+ AY
Sbjct: 650 YSMVKQYGMVDSVGQVSF--PDSE---NQSGIGRRPFSQGLQQQMDLEAKMLIAKAYRHT 704
Query: 681 KQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++++ + D L LA L+E+E V+ + +L
Sbjct: 705 EKLLLDNRDKLILLANALLEREVVNYNDIEAL 736
Score = 37 (18.1 bits), Expect = 2.9e-97, Sum P(2) = 2.9e-97
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 50 ILRKELEPNNASSEAASKRRTVTTEATMAALLLSS 84
IL K L P E + +TT+A + LL S+
Sbjct: 57 ILTKPLIPRLIGLEFHCRHNLLTTQAKLWKLLGST 91
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 191/387 (49%), Positives = 265/387 (68%)
Query: 256 SKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGK 315
S V VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGK
Sbjct: 268 SAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGK 327
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V
Sbjct: 328 TLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGG 387
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
+ QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVT
Sbjct: 388 KRIESPM--HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVT 445
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
V RPDV GR +IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA +
Sbjct: 446 VPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKE 505
Query: 496 EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIP 555
++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+P
Sbjct: 506 MVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMP 565
Query: 556 RGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ 615
RG G P +R +R+ L QM V++GGRVAEE+IFG +++TTGAS+DF
Sbjct: 566 RGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDN 622
Query: 616 VSRVARQMVERFGFSKKIGQVAIGGPG 642
+++A++MV +FG S+K+G + G
Sbjct: 623 ATKIAKRMVTKFGMSEKLGVMTYSDTG 649
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 202/452 (44%), Positives = 292/452 (64%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AKLE++E VD+LK+P+++ LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P +
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R +I + H +G L + F ++++ TPGF+GAD+ N+ NEAA+ AAR +
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFN 544
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG- 560
A+ER+IAG KK+ ++S E++++VA+HE+GHALVG L+ + V K+SI PR A
Sbjct: 545 FEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 604
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G + P ++ L +++ L +M +ALGGR AE + F VT+GA +D +V+R+A
Sbjct: 605 GFSQMLPRDQYL----FTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIA 658
Query: 621 RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRA 680
MV++FG + IG V+ P G ++ +S ++D E + LV AY
Sbjct: 659 YSMVKQFGMAPSIGPVSF--PEAQE--GLMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHT 714
Query: 681 KQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++++ ++D L LA L+EKE ++ E+ +L
Sbjct: 715 EKVLLDNLDKLQALANALLEKEVINYEDIEAL 746
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 201/452 (44%), Positives = 292/452 (64%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AKLE++E VD+LK+P+++ LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 305 GVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR D+LD+ALLRPGR DR V +D P +
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQE 484
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R +I + H + L + F ++++ TPGF+GAD+ N+ NEAA+ AAR +
Sbjct: 485 RREIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFN 544
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG- 560
A+ER+IAG KK+ ++S E++K+VA+HE+GHALVG L+ + V K+SI PR A
Sbjct: 545 FEYAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAAL 604
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G P ++ L +++ L +M +ALGGRV+E + F + VT+GA +D +V+R+A
Sbjct: 605 GFAQMLPRDQHL----FTKEQLFERMCMALGGRVSETISFNK--VTSGAQDDLRKVTRIA 658
Query: 621 RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRA 680
MV++FG + IG ++ P G ++ +S ++D E + LV AY
Sbjct: 659 YSMVKQFGMAPSIGPISF--PEVQE--GLTGIGRRPFSQGLQQMMDHEAKLLVAKAYRHT 714
Query: 681 KQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++++ ++D L LA L+EKE ++ E+ +L
Sbjct: 715 EKVLQDNLDKLQALANALLEKEVINYEDIEAL 746
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 199/452 (44%), Positives = 290/452 (64%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AKLE++E VD+LK+P+++ LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR D+LD AL+RPGR DR V +D P +
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R +I + H + L + F ++++ TPGF+GAD+ N+ NEAA+ AAR +
Sbjct: 485 RREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLN 544
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG- 560
A+ER++AG KK+ ++S E++K+VA+HE+GHALVG ++ + V K+SI PR A
Sbjct: 545 FEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAAL 604
Query: 561 GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVA 620
G P ++ L +++ L +M +ALGGR +E + F E VT+GA +D +V+R+A
Sbjct: 605 GFAQMLPRDQHL----FTKEQLFERMCMALGGRASEALSFNE--VTSGAQDDLRKVTRIA 658
Query: 621 RQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRA 680
MV++FG + IG ++ P G ++ +S ++D E R LV AY
Sbjct: 659 YSMVKQFGMAPGIGPISF--PEAQE--GLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHT 714
Query: 681 KQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
++++ ++D L LA L+EKE ++ E+ +L
Sbjct: 715 EKVLQDNLDKLQALANALLEKEVINYEDIEAL 746
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 200/464 (43%), Positives = 291/464 (62%)
Query: 254 SKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT 313
+ K +V ++ V F DV G D+A+ EL+E+VDFLK+P K+T LG K+PKG LL GPPGT
Sbjct: 210 TSDKSVDVSQSTVRFKDVQGCDEARAELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGT 269
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTLLARA AGEAGVPFF + SEF EL+VGVGA R+R+LF +A+ KAP I+FIDE+DA+
Sbjct: 270 GKTLLARATAGEAGVPFFFMSGSEFDELYVGVGAKRIRELFSQARDKAPAIIFIDELDAI 329
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
+QT+NQLL E+DGFS G+I++ ATN P+ LD AL RPGRFD++
Sbjct: 330 GGKRNPKDQAY---AKQTLNQLLVELDGFSQTEGIIIIGATNFPESLDKALTRPGRFDKE 386
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V VD PDV GR+ IL+ H + A DVD I+R TPG +GA+L NL+N+AA+ A++
Sbjct: 387 VIVDLPDVRGRIDILKHHMQNVETADDVDPSIIARGTPGLSGAELMNLVNQAAVHASQLS 446
Query: 494 LKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISI 553
+ + A ++I+ G KK V+++E + AYHEAGHA++ P+ K +I
Sbjct: 447 APAVDMNHFEWAKDKILMGAAKKKMVITEESRINTAYHEAGHAIMAMFSKGATPLYKATI 506
Query: 554 IPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDF 613
+PRG+A G+TF P ++++ S+ ++ V +GG++AEE+I G+ENVT+G ++D
Sbjct: 507 LPRGRALGITFQLPEMDKVDM---SKQECFARLDVCMGGKIAEEMINGKENVTSGCASDL 563
Query: 614 MQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELV 673
+ VAR MV +G S KIG V + + +S ++ D EVR+ +
Sbjct: 564 SNATSVARAMVTSYGMSDKIGPVRLS------------DDWESWSPQIRNMADNEVRDYL 611
Query: 674 ETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 717
+ R ++++ L +LA+ L+E ET+ EE M + G+
Sbjct: 612 LDSEKRTRKLLYDKRLELKRLAEGLLEYETLTKEE-MEKVVKGE 654
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 186/369 (50%), Positives = 255/369 (69%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGKTLLARAVAGE
Sbjct: 275 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 334
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VPF+ + SEF E+FVGVGASR+R LF +AK+ APC++FIDE+D+V +
Sbjct: 335 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPM--H 392
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
QTINQLL EMDGF N GV+++ ATN P+ LD+AL+RPGRFD QVTV +PDV GR
Sbjct: 393 PYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 452
Query: 446 KILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 505
+IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA ++ E+ +
Sbjct: 453 EILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFS 512
Query: 506 LERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 565
++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+ RG G
Sbjct: 513 KDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVSL 572
Query: 566 APSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVE 625
P +R +RS L QM V +GGR AEE+IFG +++TTGAS+DF +++A+ MV
Sbjct: 573 LPENDRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVT 629
Query: 626 RFGFSKKIG 634
RFG S+K+G
Sbjct: 630 RFGMSEKLG 638
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 133/328 (40%), Positives = 204/328 (62%)
Query: 390 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 449
QTINQLL EMDGF N GV+++ ATN P+ LD+AL+RPGRFD QVTV +PDV GR +IL+
Sbjct: 397 QTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTEILK 456
Query: 450 VHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 509
+ + VD E I+R T GF+GA+L+NL+N+AA+ AA ++ E+ + ++I
Sbjct: 457 WYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFSKDKI 516
Query: 510 IAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSE 569
+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+ RG G P
Sbjct: 517 LMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVSLLPEN 576
Query: 570 ERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGF 629
+R +RS L QM V +GGR AEE+IFG +++TTGAS+DF +++A+ MV RFG
Sbjct: 577 DRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTRFGM 633
Query: 630 SKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHID 689
S+K+G + G ++S + T ++ EVR L+ +Y RAK I+ TH
Sbjct: 634 SEKLGVMTYTDTG-------KVSPE------TQSAIEQEVRTLLRDSYERAKNILKTHAK 680
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFIDGK 717
LA+ L++ ET+D +E + + ++GK
Sbjct: 681 EHKNLAEALLKYETLDAKE-IQIVLEGK 707
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 186/369 (50%), Positives = 255/369 (69%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
VTF V G ++AK ELQEVV+FLKNP K+T LG K+PKG LLVGPPGTGKTLLARAVAGE
Sbjct: 280 VTFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VPF+ + SEF E+FVGVGASR+R LF +AK+ APC++FIDE+D+V +
Sbjct: 340 ADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPM--H 397
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
QTINQLL EMDGF N GV+++ ATN P+ LD+AL+RPGRFD QVTV +PDV GR
Sbjct: 398 PYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 457
Query: 446 KILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 505
+IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA ++ E+ +
Sbjct: 458 EILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFS 517
Query: 506 LERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 565
++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+ RG G
Sbjct: 518 KDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVSL 577
Query: 566 APSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVE 625
P +R +RS L QM V +GGR AEE+IFG +++TTGAS+DF +++A+ MV
Sbjct: 578 LPENDRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVT 634
Query: 626 RFGFSKKIG 634
RFG S+K+G
Sbjct: 635 RFGMSEKLG 643
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 133/328 (40%), Positives = 204/328 (62%)
Query: 390 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 449
QTINQLL EMDGF N GV+++ ATN P+ LD+AL+RPGRFD QVTV +PDV GR +IL+
Sbjct: 402 QTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRTEILK 461
Query: 450 VHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 509
+ + VD E I+R T GF+GA+L+NL+N+AA+ AA ++ E+ + ++I
Sbjct: 462 WYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEFSKDKI 521
Query: 510 IAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSE 569
+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+ RG G P
Sbjct: 522 LMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVSLLPEN 581
Query: 570 ERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGF 629
+R +RS L QM V +GGR AEE+IFG +++TTGAS+DF +++A+ MV RFG
Sbjct: 582 DRWSE---TRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTRFGM 638
Query: 630 SKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHID 689
S+K+G + G ++S + T ++ EVR L+ +Y RAK I+ TH
Sbjct: 639 SEKLGVMTYTDTG-------KVSPE------TQSAIEQEVRTLLRDSYERAKNILKTHAK 685
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFIDGK 717
LA+ L++ ET+D +E + + ++GK
Sbjct: 686 EHKNLAEALLKYETLDAKE-IQIVLEGK 712
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 199/459 (43%), Positives = 288/459 (62%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
V F+DV G D+AK EL+E+VDFL++P +T LG K+P+G LL GPPGTGKT+LARAVAGE
Sbjct: 264 VRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGE 323
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
A VPFF + S+F E++VGVGA RVR+LF A+ +AP I+FIDE+DA+
Sbjct: 324 ANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA-- 381
Query: 386 DEREQTINQLLTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 441
QT+NQLL ++DGFS N V+ + ATN P+ LD AL RPGRFDR + V PDV
Sbjct: 382 -HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDV 440
Query: 442 AGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
GR+ IL H+R L KDVD I+R T GF GADL NL+N+AA+ A++ +S +
Sbjct: 441 RGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRD 500
Query: 502 ISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGG 561
+ + +RI+ G E+K+A ++ E K + AYHE GHALV K +I+PRG + G
Sbjct: 501 LEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLG 560
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
+T P ++ +S ++R + V +GGR AEE+++G++ +T+GA ND + ++VAR
Sbjct: 561 MTISLPDMDK-DS--WTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVAR 617
Query: 622 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAK 681
+MV FG S +IG V+ L +M + S AT +V++E++ L+E +Y R+
Sbjct: 618 RMVTEFGMSDRIGPVS---------LEAEMDN---LSPATRALVESEIKSLLEASYERSL 665
Query: 682 QIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 720
++ +H L LA L++ E + EE M+ + G +L
Sbjct: 666 SLLKSHKKELDALATALVDYEFLTAEE-MNRVVKGDRDL 703
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 177/377 (46%), Positives = 248/377 (65%)
Query: 252 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
G S K V VTFADV G D+ K EL+E++D+LKN DK+T +GAK+PKG LL G P
Sbjct: 237 GVSNKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEP 296
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTL+ARA+AGEA VPF + SEF E+FVGVGA R+R+LF+ AK APCIVFIDEID
Sbjct: 297 GTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEID 356
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV N T+NQLL E+DGF N G++V+ ATN P LD AL+RPGR D
Sbjct: 357 AVGSKRSSRD---NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLD 413
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
+ + V PD+ GR +IL+++S L+KDVD +SRRT G TGADL N++N AAI +
Sbjct: 414 KTIVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSV 473
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKI 551
K + + I A +R++ G ++K+ + ++E+K + AYHE GH LV DPV K
Sbjct: 474 EGKKSVDMNSIEQAFDRVVVGLQRKSPL-NEEEKNITAYHEGGHTLVNFYTKGSDPVHKA 532
Query: 552 SIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASN 611
+I+PRG + G+T+ P ++ + +++++ + +GG V+EE+IFG+ NVTTG S+
Sbjct: 533 TIMPRGMSLGVTWKIPISDKYSQKIKD---VQSEIDILMGGLVSEEIIFGKNNVTTGCSS 589
Query: 612 DFMQVSRVARQMVERFG 628
D + + +A+ +V +G
Sbjct: 590 DLQKATHIAQSLVMNYG 606
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 124/350 (35%), Positives = 203/350 (58%)
Query: 370 IDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
ID + N T+NQLL E+DGF N G++V+ ATN P LD AL+RPGR
Sbjct: 352 IDEIDAVGSKRSSRDNSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGR 411
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILA 489
D+ + V PD+ GR +IL+++S L+KDVD +SRRT G TGADL N++N AAI
Sbjct: 412 LDKTIVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKC 471
Query: 490 ARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVA 549
+ K + + I A +R++ G ++K+ + ++E+K + AYHE GH LV DPV
Sbjct: 472 SVEGKKSVDMNSIEQAFDRVVVGLQRKSPL-NEEEKNITAYHEGGHTLVNFYTKGSDPVH 530
Query: 550 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGA 609
K +I+PRG + G+T+ P ++ + +++++ + +GG V+EE+IFG+ NVTTG
Sbjct: 531 KATIMPRGMSLGVTWKIPISDKYSQKIKD---VQSEIDILMGGLVSEEIIFGKNNVTTGC 587
Query: 610 SNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEV 669
S+D + + +A+ +V +G V I + FL + + ++ + +D +
Sbjct: 588 SSDLQKATHIAQSLVMNYG-------VGINEDNISMFLHDKQNISEEMKIK----IDKSI 636
Query: 670 RELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAE 719
+ ++ +Y RAK ++ HID LH++A L+E ET+ +E + L + GK +
Sbjct: 637 QRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTSDE-IKLAMQGKCD 685
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 177/377 (46%), Positives = 248/377 (65%)
Query: 252 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
G S K V VTFADV G D+ K EL+E++D+LKN DK+T +GAK+PKG LL G P
Sbjct: 237 GVSNKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEP 296
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTL+ARA+AGEA VPF + SEF E+FVGVGA R+R+LF+ AK APCIVFIDEID
Sbjct: 297 GTGKTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEID 356
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV N T+NQLL E+DGF N G++V+ ATN P LD AL+RPGR D
Sbjct: 357 AVGSKRSSRD---NSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLD 413
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
+ + V PD+ GR +IL+++S L+KDVD +SRRT G TGADL N++N AAI +
Sbjct: 414 KTIVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSV 473
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKI 551
K + + I A +R++ G ++K+ + ++E+K + AYHE GH LV DPV K
Sbjct: 474 EGKKSVDMNSIEQAFDRVVVGLQRKSPL-NEEEKNITAYHEGGHTLVNFYTKGSDPVHKA 532
Query: 552 SIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASN 611
+I+PRG + G+T+ P ++ + +++++ + +GG V+EE+IFG+ NVTTG S+
Sbjct: 533 TIMPRGMSLGVTWKIPISDKYSQKIKD---VQSEIDILMGGLVSEEIIFGKNNVTTGCSS 589
Query: 612 DFMQVSRVARQMVERFG 628
D + + +A+ +V +G
Sbjct: 590 DLQKATHIAQSLVMNYG 606
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 124/350 (35%), Positives = 203/350 (58%)
Query: 370 IDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 429
ID + N T+NQLL E+DGF N G++V+ ATN P LD AL+RPGR
Sbjct: 352 IDEIDAVGSKRSSRDNSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGR 411
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILA 489
D+ + V PD+ GR +IL+++S L+KDVD +SRRT G TGADL N++N AAI
Sbjct: 412 LDKTIVVPLPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKC 471
Query: 490 ARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVA 549
+ K + + I A +R++ G ++K+ + ++E+K + AYHE GH LV DPV
Sbjct: 472 SVEGKKSVDMNSIEQAFDRVVVGLQRKSPL-NEEEKNITAYHEGGHTLVNFYTKGSDPVH 530
Query: 550 KISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGA 609
K +I+PRG + G+T+ P ++ + +++++ + +GG V+EE+IFG+ NVTTG
Sbjct: 531 KATIMPRGMSLGVTWKIPISDKYSQKIKD---VQSEIDILMGGLVSEEIIFGKNNVTTGC 587
Query: 610 SNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEV 669
S+D + + +A+ +V +G V I + FL + + ++ + +D +
Sbjct: 588 SSDLQKATHIAQSLVMNYG-------VGINEDNISMFLHDKQNISEEMKIK----IDKSI 636
Query: 670 RELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAE 719
+ ++ +Y RAK ++ HID LH++A L+E ET+ +E + L + GK +
Sbjct: 637 QRILLDSYNRAKNVLNQHIDELHRIASALVEYETLTSDE-IKLAMQGKCD 685
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 193/456 (42%), Positives = 287/456 (62%)
Query: 266 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
+ F DVAG +AK+E++E VD+LKNP ++T LGAK+P+G LL GPPG GKTLLA+A+A E
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAE 341
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX- 384
+ VPF S SEFVE+ G+GASR+R LF++A+S+APCI++IDEIDA+
Sbjct: 342 STVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAGG 401
Query: 385 -----NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
+ E EQT+NQLL EMDG +GV+VLA+TNR DVLD ALLRPGRFDR +++D P
Sbjct: 402 GFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLP 461
Query: 440 DVAGRVKILQVHSRGKAL--AKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
V R + +++ R L A ++++ TPGFTGAD+ N+ NE+AI AA +
Sbjct: 462 TVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASNKCHVV 521
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRG 557
+ ++ AL+R++AG EK++ + +E++++VAYHEAGHALVG ++ D + K++IIPR
Sbjct: 522 THKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPRT 581
Query: 558 QAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQV 616
A G ++P ++ L +S+ L ++M + LGGR AE + FG T+GA +D +V
Sbjct: 582 SAALGFAQYSPRDKHL----FSKDELFDRMCMMLGGRCAENLKFGR--ATSGAQDDLQKV 635
Query: 617 SRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETA 676
++ A V+ +G S +G ++ P F Q+ K YS A D E +V A
Sbjct: 636 TKSAYAQVKLYGMSSIVGPLSF--PNTEGF---QI---KPYSKKFASTFDQEATLIVAKA 687
Query: 677 YTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+I ++D L +AQ L+++E ++ E+ L
Sbjct: 688 NEATTDLIKNNMDKLETIAQALLKREVLNYEDVKKL 723
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 181/378 (47%), Positives = 249/378 (65%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
++ E +T +F DV G + K EL+E+VD+L +P KY ++GAK+PKG LL G PGTGKT
Sbjct: 288 EYDETNQTPTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKT 347
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
LLARA+AGEAGV F S F E +VGVG+ RVR+LF A+ K PCI+FIDEIDAV
Sbjct: 348 LLARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKS 407
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
+T+ QLLTEMDGF GNS ++++ ATN P+ LD ALLRPGRFDR ++V
Sbjct: 408 RNTA------HHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISV 461
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
PD+ GR +I+ + + +V + I+R TPGFTGADL NL+N AAI A + +
Sbjct: 462 PIPDMKGRSEIIDHYLKKVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKET 521
Query: 497 ISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR 556
IS +I DA + I+ G + NAV+S+E ++ AYHEAGHALV A+ DP+ K +I+ R
Sbjct: 522 ISIKQIDDARDDILMGRARLNAVMSEEARRNTAYHEAGHALVAAMTEAADPIHKATIVQR 581
Query: 557 GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQV 616
GQA G+ P + ++ Y+R + ++A+ L GR AEE+ FG + VT+GAS+DF Q
Sbjct: 582 GQALGMVSQLPEMDHVQ---YTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQA 638
Query: 617 SRVARQMVERFGFSKKIG 634
S +A M+ ++G S K+G
Sbjct: 639 SSLAFSMITKWGMSDKVG 656
Score = 197 (74.4 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 44/136 (32%), Positives = 78/136 (57%)
Query: 577 YSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQV 636
Y+R + ++A+ L GR AEE+ FG + VT+GAS+DF Q S +A M+ ++G S K+G
Sbjct: 599 YTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFSMITKWGMSDKVG-- 656
Query: 637 AIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQ 696
F+ + + + +++ EV++L++ Y +K++I + D + KL
Sbjct: 657 ---------FIYHKDKTSPEVQK----IIEDEVKDLLDKQYQYSKELIIKNRDNMEKLVG 703
Query: 697 LLIEKETVDGEEFMSL 712
L+EKET+ GEE + +
Sbjct: 704 QLLEKETLTGEEILKI 719
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 184/379 (48%), Positives = 252/379 (66%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
E P T TFADV GA++AK ELQ++VDFL+NP+KY +PKG LLVGPPGTGKTLLA
Sbjct: 157 ERPNT--TFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLA 214
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
+++AGEA V F + SEF E FVGVGA RVR+LFE A+ +PCIVFIDEID+V
Sbjct: 215 KSLAGEARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSRTK 274
Query: 380 XXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
N + +NQLL E+DGF G GV+V+AATN D LD+AL+R GRFDR + V P
Sbjct: 275 RV---NYHPSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLP 331
Query: 440 DVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISK 499
D R I+ + + K +A V+ I++ TPGF+GADL NL+N AA+ + +L EI+
Sbjct: 332 DGKARKSIIDHYLKDKPIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITM 391
Query: 500 DEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 559
+++ +A E ++ G E+ + ++SDE +K+ A+HEAGHALV + P V K +I+PRG A
Sbjct: 392 EQLENAKENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPRGDA 451
Query: 560 GGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRV 619
GL EE ++ L QM VA+GGR AEE+I G+EN++ GAS+D + + +
Sbjct: 452 LGLVSMLEKEETF----VTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSI 507
Query: 620 ARQMVERFGFSKKIGQVAI 638
A+ MV +G S+K+GQ+ I
Sbjct: 508 AKAMVSNYGMSEKVGQIYI 526
Score = 219 (82.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 49/140 (35%), Positives = 82/140 (58%)
Query: 573 ESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKK 632
E ++ L QM VA+GGR AEE+I G+EN++ GAS+D + + +A+ MV +G S+K
Sbjct: 461 EETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAMVSNYGMSEK 520
Query: 633 IGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILH 692
+GQ+ I S+K S A ++VD+EV+ L++++Y RA Q++ + H
Sbjct: 521 VGQIYI-------------QSEKKLSSAQRELVDSEVKSLLDSSYIRATQLLKKYSKEHH 567
Query: 693 KLAQLLIEKETVDGEEFMSL 712
+A L+E ET+ +E +
Sbjct: 568 LIANALLEYETLSLDEIKDI 587
Score = 41 (19.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/65 (18%), Positives = 31/65 (47%)
Query: 392 INQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR----FDRQVTVDRPDVAGRVKI 447
I+Q T+ + F+G + ++ T D+ ++L + +R+ + +P ++ R +
Sbjct: 21 ISQKFTQNNQFNGAKNLNKISNTPHNDIFSTSLFKRNENILSLNREFSTTKPLLSFRKRA 80
Query: 448 LQVHS 452
+ S
Sbjct: 81 TSIFS 85
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 583 (210.3 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 117/214 (54%), Positives = 154/214 (71%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AKLE++E VD+LK+P+++ LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P +
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTG 475
R +I + H +G L + F ++++ TPGF+G
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 302 (111.4 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 71/203 (34%), Positives = 118/203 (58%)
Query: 511 AGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSE 569
+G KK+ ++S E++++VA+HE+GHALVG L+ + V K+SI PR A G + P +
Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRD 576
Query: 570 ERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGF 629
+ L +++ L +M +ALGGR AE + F VT+GA +D +V+R+A MV++FG
Sbjct: 577 QYL----FTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVKQFGM 630
Query: 630 SKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHID 689
+ IG V+ P G ++ +S ++D E R LV AY ++++ ++D
Sbjct: 631 APSIGPVSF--PEAQE--GLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLD 686
Query: 690 ILHKLAQLLIEKETVDGEEFMSL 712
L LA L+EKE ++ E+ +L
Sbjct: 687 KLQALANALLEKEVINYEDIEAL 709
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 583 (210.3 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 117/214 (54%), Positives = 154/214 (71%)
Query: 265 GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
GV+F DVAG +AKLE++E VD+LK+P+++ LGAK+PKG LL+GPPG GKTLLA+AVA
Sbjct: 305 GVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX- 383
EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV
Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGF 424
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E EQT+NQLL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P +
Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQE 484
Query: 444 RVKILQVHSRGKALAKDVDF--EKISRRTPGFTG 475
R +I + H +G L + F ++++ TPGF+G
Sbjct: 485 RREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 302 (111.4 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 71/203 (34%), Positives = 118/203 (58%)
Query: 511 AGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSE 569
+G KK+ ++S E++++VA+HE+GHALVG L+ + V K+SI PR A G + P +
Sbjct: 517 SGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRD 576
Query: 570 ERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGF 629
+ L +++ L +M +ALGGR AE + F VT+GA +D +V+R+A MV++FG
Sbjct: 577 QYL----FTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVKQFGM 630
Query: 630 SKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHID 689
+ IG V+ P G ++ +S ++D E R LV AY ++++ ++D
Sbjct: 631 APSIGPVSF--PEAQE--GLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLD 686
Query: 690 ILHKLAQLLIEKETVDGEEFMSL 712
L LA L+EKE ++ E+ +L
Sbjct: 687 KLQALANALLEKEVINYEDIEAL 709
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 714 (256.4 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 157/375 (41%), Positives = 229/375 (61%)
Query: 254 SKSKFQEVPETGVT--FADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 311
S + E E GV F DVAG + +LEL+E+V F + + Y G KIP G LL GPP
Sbjct: 393 SNKRLPEYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPP 452
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
G GKTLLA+AVAGEAGV FFS +AS+FVE++VGVGASRVR L+++A+ AP +VFIDE+D
Sbjct: 453 GVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELD 512
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFD
Sbjct: 513 AVGRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFD 572
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ + +P + GR++ILQVH+R K +A+D+D+ ++ T G GA+L N++ AAI R
Sbjct: 573 RKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMR 632
Query: 492 RDLKEISKDEISDALERIIAGP-EKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAK 550
E++ D++ A + G ++K+ S E + VA +EA A+V P+ +
Sbjct: 633 DGRTELTTDDLLQAAQIEERGMLDRKDR--SLETWRQVAINEAAMAVVAVNFPDMKNIEF 690
Query: 551 ISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGA 609
++I PR G+ G + + G+ SR + + + V L R A+E+ +GE+ ++T
Sbjct: 691 LTINPRAGRELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIW 750
Query: 610 SNDFMQVSRVARQMV 624
+ AR +V
Sbjct: 751 AETSDNARSAARSLV 765
Score = 73 (30.8 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 665 VDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 712
+D E ++ Y RAK+I+ + ++ ++ + L++K+++ +EF +L
Sbjct: 788 IDVEALRILNMCYERAKEILGRNRTLMDEVVEKLVQKKSLTKQEFFTL 835
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 169/389 (43%), Positives = 242/389 (62%)
Query: 251 FGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
F +SK++ + TGV FADVAG D+A ELQE+V +LKNPD + +G K P G LL GP
Sbjct: 412 FSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGP 471
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PG GKTL+A+A+AGEAGVPF+ A SEFVE+ VGVG++R+RDLF++AK P ++FIDEI
Sbjct: 472 PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEI 531
Query: 371 DAVXXXXXXXXXXXND--------EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDS 422
DA+ +D ERE T+NQLL E+DGF GVI L ATNR D+LD
Sbjct: 532 DALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDP 591
Query: 423 ALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLM 482
ALLRPGRFDR++ V P+ GR+ IL++H+ ++ VD + PG++GA L L+
Sbjct: 592 ALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLV 651
Query: 483 NEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALM 542
EAA++A R+ I + ++ DA++R+ GP + + + + A E G A+ L+
Sbjct: 652 QEAALVAVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLL 711
Query: 543 PEYDPVA-----KISIIPRGQAGGLTFFAPSEERLESGLYSR-SYLENQMAVALGGRVAE 596
Y+ ++SIIPRGQ F ++ ES ++ R L +++ V LGGR AE
Sbjct: 712 LRYENAKIERCDRVSIIPRGQTLSQVVFHRLDD--ESYMFGRLPQLLHRLQVLLGGRAAE 769
Query: 597 EVIFGEENVTTGASNDFMQ-VSRVARQMV 624
EVI+G + T+ AS D++ S +AR+++
Sbjct: 770 EVIYGSD--TSKASVDYLSDASWLARKIL 796
Score = 425 (154.7 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 116/343 (33%), Positives = 184/343 (53%)
Query: 387 EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVK 446
ERE T+NQLL E+DGF GVI L ATNR D+LD ALLRPGRFDR++ V P+ GR+
Sbjct: 556 ERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLD 615
Query: 447 ILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDAL 506
IL++H+ ++ VD + PG++GA L L+ EAA++A R+ I + ++ DA+
Sbjct: 616 ILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAV 675
Query: 507 ERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVA-----KISIIPRGQAGG 561
+R+ GP + + + + A E G A+ L+ Y+ ++SIIPRGQ
Sbjct: 676 DRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENAKIERCDRVSIIPRGQTLS 735
Query: 562 LTFFAPSEERLESGLYSR-SYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQ-VSRV 619
F ++ ES ++ R L +++ V LGGR AEEVI+G + T+ AS D++ S +
Sbjct: 736 QVVFHRLDD--ESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSD--TSKASVDYLSDASWL 791
Query: 620 ARQMVERFGFSKKIGQVAIGGPGG---NP-FLGQQM----SSQKDYSMATADV---VDAE 668
AR+++ + + V G P P F+G ++ S DY + V +D E
Sbjct: 792 ARKILTIWNLENPM--VIHGEPPPWRKRPQFVGPRLDFEGSLYDDYDLVEPPVNFNMDDE 849
Query: 669 V----RELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGE 707
V EL+ Y + ++ + L K ++L+ ++ + GE
Sbjct: 850 VAHRSEELISQMYNKTVSLLRQNQTALLKTVKVLLNQKEISGE 892
Score = 38 (18.4 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 143 WRYSEFLNAVKKGKVER---VRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVD 199
W+ F + + +V+ V+F+ D + + AVD + V +PDL D + +
Sbjct: 407 WQGIAFSQSKAEARVDGSTGVKFA-DVAGID-EAVDELQELVKYLKNPDLFDKMGIKPPH 464
Query: 200 ISVSEGDSGNG 210
+ EG G G
Sbjct: 465 GVLLEGPPGCG 475
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 707 (253.9 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 180/475 (37%), Positives = 269/475 (56%)
Query: 252 GRSKSKFQEVPE-TGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 310
G+S++KF E TGVTF D AG + K ELQE+V LKN +++ G PKG LL GP
Sbjct: 298 GKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGP 357
Query: 311 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 370
PGTGKTLLA+A+AGEAG+PFF+ ++FVE+FVGV ASRV+DLF ++S AP I+FIDEI
Sbjct: 358 PGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEI 417
Query: 371 DAVXXXXXXXXXXXND-EREQTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPG 428
DA+ EREQ + Q+LTEMDGF S V+V+ ATNR D+LD ALLR G
Sbjct: 418 DAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKG 477
Query: 429 RFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEK----ISRRTPGFTGADLQNLMNE 484
RFD+ + V P GR+ IL+VH+R K + + E+ ++ T FTGA+LQN++NE
Sbjct: 478 RFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNE 537
Query: 485 AAILAARRDLKEISKDEISDALER---IIAGPEKKNAVVSDEKKKLVAYHEAGHALVGAL 541
A IL AR+DL I ++E+ +AL+R ++ + V +E K +AY EA A++
Sbjct: 538 AGILTARKDLDYIGREELLEALKRQKGTFETGQEDSTEVPEELKLRLAYREAAVAVLACY 597
Query: 542 MPE-YDPVAKISIIPRGQAGGLTFFAPSEERLESG-LYSR-SYLENQMAVALGGRVAEEV 598
+P+ Y P+++ I + + SE SG +++R S N + A RV EE
Sbjct: 598 LPDQYRPISETDINSIRSQPNMRY---SET---SGRVFARKSDYVNSIIRACAPRVVEEE 651
Query: 599 IFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYS 658
+FG EN+ ++ ++ S+ A ++ + G A G +Q+D
Sbjct: 652 MFGIENLCWISAKSTLEASQRAEFLI------LQTGMTAFGKA--------YYRNQRDLV 697
Query: 659 MATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLF 713
++A E + A + I+ + L ++ +L+EK + +E +++
Sbjct: 698 PNLVPKLEALRDEYMRFAVEKCSSILQEYQSALEEITDVLLEKGEIKADEIWNIY 752
Score = 40 (19.1 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 38/169 (22%), Positives = 61/169 (36%)
Query: 6 SNPLLTSNFFGS-QILISPPTPKTRRLSVSFP-FPSRTKRTTQATAILRKELEPNNASSE 63
SN L S F GS + P +LS F FPSR R T E S+E
Sbjct: 21 SNTLFPSQFRGSLSSFVRRRKPTEAKLSSKFNLFPSR--RNGLITCCSTSSFE----STE 74
Query: 64 AASKRRTVTTEATMAALLLSSIAPQALAVDNTXXXXXXXLVQAQXXXXXXXXXXXFGQNL 123
++ + E+ L + L+ N VQ + + + L
Sbjct: 75 SSVSQEE-DAESNRLFEKLRETERERLS--NMEELERKANVQLERQLVMASD---WSRTL 128
Query: 124 LLTAPKPQSQSSDLPEGS-QWRYSEFLNAVKKGKVERVRFSKDGSALQL 171
L K + D PE S + +S+F+ + V+ + +S G + +
Sbjct: 129 LTMRGKLKGTEWD-PETSHRINFSDFMKLLDSNSVQYMEYSNYGQTISV 176
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 705 (253.2 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 149/267 (55%), Positives = 187/267 (70%)
Query: 254 SKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT 313
+K + + P G F DV G D AK EL E+V L+ Y LGA++P+G LLVGPPGT
Sbjct: 321 AKKRRSKNPTVG--FDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGT 378
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTLLARAVAGEAGVPFFS +ASEFVELFVG GA+R+RDLF A+ +P I+FIDE+DAV
Sbjct: 379 GKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAV 438
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
NDER+QT+NQLLTEMDGF ++ VIV+AATNRP+ LDSAL RPGRF R+
Sbjct: 439 GGKRGRSF---NDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRK 495
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAAR 491
V V PD GR KIL +H R L +D + ++ TPGF GADL N++NEAA+LAAR
Sbjct: 496 VLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAAR 555
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R + +++++I +A+ER G K A
Sbjct: 556 RGGEAVAREDIMEAIERAKFGINDKEA 582
Score = 39 (18.8 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 137 LPEGSQWRYSEFLNAVKKGKVERVRFSKDGS 167
+P S YS+F+ ++ G V +V ++GS
Sbjct: 169 VPSPSIVPYSDFVTNLRGGSVSKVLL-EEGS 198
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 697 (250.4 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 141/274 (51%), Positives = 195/274 (71%)
Query: 264 TGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
+ +TF DVAG D+ K+EL E+VDFL+NP KY G K+PKG L+VGPPG GKTL+A+AVA
Sbjct: 147 SNITFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVA 206
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
GEAGVPFF + S FVE++VG+GA RVR+LF KAK AP IVFIDEIDAV
Sbjct: 207 GEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS-- 264
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N ER+ T+NQLLT+MDGF NSGVIV+AATN+ +++D ALLR GRFDR++ + PD
Sbjct: 265 -NVERDSTLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKD 323
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R+KIL+++ + K +++ KI++ + GF+GA L+ L+NEAAI A RR+ + + +
Sbjct: 324 RLKILEIYMKDKN--NNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFY 381
Query: 504 DALERIIAGPEKKNAVVSDEKKKLVAYHEAGHAL 537
L +++ G +KK ++E+KK+ A ++A AL
Sbjct: 382 AVLNKVLLG-KKKILSFNNEEKKIQATYQAAKAL 414
Score = 44 (20.5 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 689 DILHKLAQLLIEKETVDGEE 708
D + KL++LL+EKE ++ ++
Sbjct: 512 DKILKLSELLLEKEKIEYDD 531
>TAIR|locus:2206380 [details] [associations]
symbol:FTSH12 "FTSH protease 12" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS;IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 HSSP:Q01853
eggNOG:COG0465 GO:GO:0009535 EMBL:AC007202 GO:GO:0004176 KO:K03798
EMBL:AY035166 IPI:IPI00518515 PIR:A96827 RefSeq:NP_565212.1
UniGene:At.48395 UniGene:At.66914 ProteinModelPortal:Q9SAJ3
SMR:Q9SAJ3 STRING:Q9SAJ3 MEROPS:M41.A06 PaxDb:Q9SAJ3 PRIDE:Q9SAJ3
EnsemblPlants:AT1G79560.1 GeneID:844294 KEGG:ath:AT1G79560
GeneFarm:1828 TAIR:At1g79560 HOGENOM:HOG000090030 InParanoid:Q9SAJ3
OMA:QAVIFIC PhylomeDB:Q9SAJ3 ProtClustDB:CLSN2689328
Genevestigator:Q9SAJ3 Uniprot:Q9SAJ3
Length = 1008
Score = 662 (238.1 bits), Expect = 8.2e-69, Sum P(2) = 8.2e-69
Identities = 162/441 (36%), Positives = 245/441 (55%)
Query: 260 EVPETGVTFADVA-GADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
+V ET + +V G D L L E++ ++ NP +Y +G LL GPPGTGKTL
Sbjct: 484 DVSETKSMYKEVVLGGDVWDL-LDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLF 542
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
AR +A E+G+PF + +EF + GA+++ ++F A+ AP VF+DEIDA+
Sbjct: 543 ARTLAKESGLPFVFASGAEFTDSEKS-GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHA 601
Query: 379 XXXXXXNDEREQTINQL-----LTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
E I QL T +D FS VI + ATNRPD LD +R GR DR+
Sbjct: 602 RKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRR 661
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
+ + PD RV+I VHS GK LA+D+DF K+ RT GF+GAD++NL+NEAAI++ R+
Sbjct: 662 LYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKG 721
Query: 494 LKEISKDEISDALER-IIAG---------PEKKNAVVSDEKKKLVAYHEAGHALVGALMP 543
I + +I D L++ ++ G +K VS EKK+L+A HEAGH ++ L P
Sbjct: 722 RSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFP 781
Query: 544 EYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 603
+D A ++P G+ ++ F P E+ ++ G + Y++ QM VA GGR AE V+FG+
Sbjct: 782 RFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD- 840
Query: 604 NVTTGASNDFMQVSRVARQMV-----ERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYS 658
NVT G +D +++++AR+MV R G ++ + ++ + NP G+ + + D+
Sbjct: 841 NVTDGGKDDLEKITKIAREMVISPQSARLGLTQLVKKIGMVDLPDNPD-GELIKYRWDHP 899
Query: 659 MATADVVDAEVRELVETAYTR 679
+ EV EL TR
Sbjct: 900 HVMPAEMSVEVSELFTRELTR 920
Score = 250 (93.1 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 72/236 (30%), Positives = 123/236 (52%)
Query: 491 RRDLKEISKDEISDALERIIAGPEKKNAV--VSDEKKKLVAYHEAGHALVGALMPEYDPV 548
++D+ ++ ++ + + ++ E++ VS EKK+L+A HEAGH ++ L P +D
Sbjct: 727 QQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWH 786
Query: 549 AKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTG 608
A ++P G+ ++ F P E+ ++ G + Y++ QM VA GGR AE V+FG+ NVT G
Sbjct: 787 AFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD-NVTDG 845
Query: 609 ASNDFMQVSRVARQMV-----ERFGFS---KKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 660
+D +++++AR+MV R G + KKIG V + P NP G+ + + D+
Sbjct: 846 GKDDLEKITKIAREMVISPQSARLGLTQLVKKIGMVDL--PD-NPD-GELIKYRWDHPHV 901
Query: 661 TADVVDAEVRELVETAYTR--------AKQIITTHIDILHKLAQLLIEKETVDGEE 708
+ EV EL TR A + + IL + + L+EK + G E
Sbjct: 902 MPAEMSVEVSELFTRELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGLE 957
Score = 64 (27.6 bits), Expect = 8.2e-69, Sum P(2) = 8.2e-69
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 145 YSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIV--PNDPDLIDILAMNGVDISV 202
Y+ FL + +V V F++D L +T +G IV P DP L + + GV++ +
Sbjct: 362 YTYFLQKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYIVDIPLDPYLFETICNAGVEVDL 421
Score = 37 (18.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 479 QNLMNEAAILAARRDLKEISKDEISDALER 508
+ L + AA D+KE+ K D + R
Sbjct: 308 EQLNSSAAKYVVEFDMKEVEKSLREDVIGR 337
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 630 (226.8 bits), Expect = 7.3e-63, Sum P(2) = 7.3e-63
Identities = 155/448 (34%), Positives = 242/448 (54%)
Query: 270 DVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVP 329
DV G +AK L +V++++K PDK KIP G L GPPGTGKT LA+AVAGE G+P
Sbjct: 869 DVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLP 928
Query: 330 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDERE 389
FFS +ASE +G + ++ LF A+ AP IVFIDEIDA+ + ER
Sbjct: 929 FFSVSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEIDAIASQRSEDSQGNSRERN 988
Query: 390 QTINQLLTEMDGFSGN-SGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 448
+N LLTEMDGFS + S V V+AATN P +LD A+LRPGRFD + D P+ R
Sbjct: 989 AIVNTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGRFDETIFCDLPNSEARTIFF 1048
Query: 449 QVHSRGKALA-KDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 507
+ ++ + L + D + + G + A++ ++ EA A + K ++ + I +
Sbjct: 1049 EKFAQKQNLQWQQSDLTALVSSSQGMSSAEIDQVLREAIYQAVGTE-KPLTIEHIKQTIV 1107
Query: 508 RIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 567
R++ G +N + E+K+ A+HEA H L L+ + +I PR Q+ G
Sbjct: 1108 RVVYGSPSENIKLGKEEKRRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQSLGFVATRA 1167
Query: 568 SEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE-ENVTTGASNDFMQVSRVARQMVER 626
SEE ES YS++ + N++ V L GRVAE++ + ++TGASND + +++A +
Sbjct: 1168 SEE-YES--YSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGASNDIEKATQLAMHAIYD 1224
Query: 627 FGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITT 686
G + +G V +G + ++ + S A A V++ + TA ++++
Sbjct: 1225 GGIEESVGPVNVG-----------ILTKFEESELLAKAQKA-VQQWLITAEQSVEKLLND 1272
Query: 687 HIDILHKLAQLLIEKETVDGEEFMSLFI 714
+ L +A L+EKE++ +E +LFI
Sbjct: 1273 NCHQLELVANTLLEKESLLSDEINTLFI 1300
Score = 51 (23.0 bits), Expect = 7.3e-63, Sum P(2) = 7.3e-63
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 30 RLSVSFPFPSRTKRTTQATAILRKELEPNNASSEAASKRRTVTTEATMAALLLSSIAPQ 88
RLS + P T +T ++ K L NN S A + + T + ++ LL ++P+
Sbjct: 570 RLSKGYSIPFSTLKTNHLISLAEKAL--NNKSENIAGVQFSWPT--SFSSFLLKRLSPE 624
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 649 (233.5 bits), Expect = 1.5e-62, P = 1.5e-62
Identities = 161/447 (36%), Positives = 246/447 (55%)
Query: 270 DVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVP 329
DV G ++AK L EVV +LK P+K G KIP G L GPPGTGKTLLA+AVAGE +P
Sbjct: 852 DVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGECELP 911
Query: 330 FFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDERE 389
FFS AASE G ++ LF A+ AP I+FIDEIDA+ + ++
Sbjct: 912 FFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSDGSSRDKN 971
Query: 390 QTINQLLTEMDGFS-GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 448
T+N LLTEMDGFS V V+AATN P +LDSA+ RPGRFD + D P+ R+
Sbjct: 972 LTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARLIFF 1031
Query: 449 Q-VHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALE 507
+ S+ K ++ + +++ G + A++ ++ E+ I A + ++++ + I +
Sbjct: 1032 KRFASKHKLNWQETELQQLVSSAQGMSSAEIDQVLRES-IYQAVGENQQLTTEHIKQTMI 1090
Query: 508 RIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 567
RI+ G + + E+K+ AYHEA H L L+ P+ I+I PR QA G
Sbjct: 1091 RIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQALGFVATRA 1150
Query: 568 SEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE-ENVTTGASNDFMQVSRVARQMVER 626
SEE ES YS+ + +++ V L GRVAE++ G+ E V+TGASND + +++A +
Sbjct: 1151 SEE-YES--YSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQLAMHAIYE 1207
Query: 627 FGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITT 686
G +G V I M ++ + S A+ A V++ ++ + + +Q++
Sbjct: 1208 GGIEPTVGPVNIA-----------MLTKFEESDLLANAQQA-VKQWLDQSEQQVEQLLKD 1255
Query: 687 HIDILHKLAQLLIEKETVDGEEFMSLF 713
H L +A+ L++KE++ GEE +F
Sbjct: 1256 HYQQLTLVAETLLDKESLLGEEINLIF 1282
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 123/279 (44%), Positives = 178/279 (63%)
Query: 255 KSKFQEVPET-GVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPG 312
++K EV E V + D+ G ++ E++EVV+ LK+P+ + +G + PKG LL GPPG
Sbjct: 155 RAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPG 214
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLA+AVA E F SE V+ F+G GAS V+D+F+ AK KAP I+FIDEIDA
Sbjct: 215 TGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDA 274
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
+ + E ++T+ QLL EMDGF V ++ ATNRPD+LD A+LRPGRFDR
Sbjct: 275 IAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDR 334
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
+ V PD GR++IL++H+R LA+DV+ E+I++ T G GA+L+ + EA + A R
Sbjct: 335 IIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIR- 393
Query: 493 DLKE-ISKDEISDALERIIAGPEKKNAVVSDEKKKLVAY 530
+L++ ++ D+ A+E+I+ EKK V + V Y
Sbjct: 394 ELRDYVTMDDFRKAVEKIM---EKKKVKVKEPAHLDVLY 429
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 515 (186.3 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 112/267 (41%), Positives = 161/267 (60%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E V + + D++ LG PKG L+ GPP
Sbjct: 161 SRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPP 220
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKT++ARAVA + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 221 GTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N + V+AATNR DVLD ALLR GR D
Sbjct: 281 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLD 340
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ + P+ R +I+Q+HSR + KDV+FE+++R T F GA + + EA ++A R
Sbjct: 341 RKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 400
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
RD EI ++ DA+ + A KK A
Sbjct: 401 RDATEILHEDFMDAILEVQA---KKKA 424
Score = 37 (18.1 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 39 SRTKRTTQATAILRKELEPNNASSEAASKRRTVTTE 74
SRT I+R E++ N S+ +R TE
Sbjct: 36 SRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTE 71
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 515 (186.3 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 112/267 (41%), Positives = 161/267 (60%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E V + + D++ LG PKG L+ GPP
Sbjct: 161 SRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPP 220
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKT++ARAVA + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 221 GTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 280
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N + V+AATNR DVLD ALLR GR D
Sbjct: 281 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLD 340
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ + P+ R +I+Q+HSR + KDV+FE+++R T F GA + + EA ++A R
Sbjct: 341 RKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 400
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
RD EI ++ DA+ + A KK A
Sbjct: 401 RDATEILHEDFMDAILEVQA---KKKA 424
Score = 37 (18.1 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 39 SRTKRTTQATAILRKELEPNNASSEAASKRRTVTTE 74
SRT I+R E++ N S+ +R TE
Sbjct: 36 SRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTE 71
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 109/271 (40%), Positives = 165/271 (60%)
Query: 249 MDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLL 307
+D + + +E P+ +T+ DV G + +L+EVV+ L +P+K+ LG PKG L+
Sbjct: 152 IDASVTMMQVEEKPD--ITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLM 209
Query: 308 VGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFI 367
GPPGTGKTL ARAVA F SE V+ +VG GA VRDLF+ A+SK CI+F
Sbjct: 210 YGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFF 269
Query: 368 DEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRP 427
DE+DA+ ++E ++T+ +L+ ++DGF + VL ATNRPD LD ALLRP
Sbjct: 270 DEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRP 329
Query: 428 GRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAI 487
GR DR+V PD+ GR I +H++ + A+D+ FE ++R P TGAD++++ EA +
Sbjct: 330 GRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGM 389
Query: 488 LAARRDLKEISKDEISDALERIIAGPEKKNA 518
A R K +S+ + +A++++I K +A
Sbjct: 390 FAIRARRKVVSEKDFLEAIDKVIKSYAKFSA 420
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 107/258 (41%), Positives = 162/258 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT+ DV G + L+EVV+ L +P+++ LG PKG +L GPPGTGKTL
Sbjct: 171 EEKPD--VTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTL 228
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K CI+F DEIDA+
Sbjct: 229 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGAR 288
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+T++DGF + VL ATNRP+ LD AL+RPGR DR+V
Sbjct: 289 FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFG 348
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR IL++H++ A+ KD+ +E I+R P TGA+L+++ EA + A R +
Sbjct: 349 LPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVA 408
Query: 498 SKDEISDALERIIAGPEK 515
++ + DA+++++ G +K
Sbjct: 409 TEKDFLDAVQKVVKGNQK 426
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 107/257 (41%), Positives = 159/257 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
VT+ DV G + +L+EVV+ L +P+++ LG PKG LL GPPGTGKTL ARAVA
Sbjct: 182 VTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVAN 241
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
F SE V+ +VG GA VR+LFE A++K CI+F DEIDAV
Sbjct: 242 RTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGG 301
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
++E ++T+ +L+T++DGF + V+ ATNRP LD AL+RPGR DR++ PDV GR
Sbjct: 302 DNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGR 361
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
IL++H++ ++ +D+ +E ISR P TGA+L+++ EA + A R K ++ +
Sbjct: 362 ANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLA 421
Query: 505 ALERIIAGPEKKNAVVS 521
A++++I G K N+ +
Sbjct: 422 AVDKVIKGNLKFNSTAT 438
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 501 (181.4 bits), Expect = 4.4e-49, Sum P(2) = 4.4e-49
Identities = 99/243 (40%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 474 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 531
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 591
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 592 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD + +++ T GF+GADL + A LA R ++ EI
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 711
Query: 498 SKD 500
++
Sbjct: 712 RRE 714
Score = 497 (180.0 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 109/254 (42%), Positives = 154/254 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+ + AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTI-NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
+ E E+ I +QLLT MDG + VIV+AATNRP+ +D AL R GRFDR
Sbjct: 310 ASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR 369
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
+V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 370 EVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRK 429
Query: 493 DLKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 430 KMDLIDLEDETIDA 443
Score = 39 (18.8 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 39 SRTKRTTQATAILRKELEPNNAS-SEAASKRRTVTT--EATMAALLL 82
S +K +TAIL+++ PN EA ++ +V + +A M L L
Sbjct: 5 SDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQL 51
Score = 37 (18.1 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 427 IRKKMDLIDLEDETIDAEVMNSLAV 451
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 107/255 (41%), Positives = 160/255 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG PKG LL GPPGTGKTL
Sbjct: 178 EEKPD--VTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTL 235
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K CI+F DE+DA+
Sbjct: 236 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGAR 295
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+T++DGF + V+ ATNRP+ LD ALLRPGR DR+V
Sbjct: 296 FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFS 355
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++HS+ ++ KD+ +E ISR P TGA+L+++ EA + A R K
Sbjct: 356 LPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVA 415
Query: 498 SKDEISDALERIIAG 512
++ + A++++I G
Sbjct: 416 NEKDFLKAVDKVIKG 430
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 110/259 (42%), Positives = 164/259 (63%)
Query: 259 QEVPETGVTFADVAGA-DQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
+E P+ VT++DV G DQ + +L+EVV+ L +P+++ LG PKG LL GPPGTGKT
Sbjct: 201 EEKPD--VTYSDVGGCKDQIE-KLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKT 257
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
L ARAVA F SE V+ +VG GA VR+LFE A++K CI+F DEIDAV
Sbjct: 258 LCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGA 317
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
++E ++T+ +L+T++DGF + V+ ATNRP+ LD ALLRPGR DR+V
Sbjct: 318 RFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEF 377
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
PD+ GR I ++HS+ ++ + + +E ISR P TGA+L+++ EA + A R K
Sbjct: 378 SLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKV 437
Query: 497 ISKDEISDALERIIAGPEK 515
++ + A++++I+G +K
Sbjct: 438 ATEKDFLKAVDKVISGYKK 456
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 107/261 (40%), Positives = 161/261 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT+ DV G + +++EVV+ + +P+K+ LG PKG L GPPGTGKTL
Sbjct: 160 EEKPD--VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F SE V+ +VG GA VR+LF+ A+SK CIVF DE+DA+
Sbjct: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +++ ++DGF + VL ATNRPD LD ALLRPGR DR+V
Sbjct: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ R +I ++H+R +D+ FE ++R P TGAD++++ EA + A R K +
Sbjct: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTV 397
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + DA+ ++I G +K +A
Sbjct: 398 TEKDFLDAVNKVIKGYQKFSA 418
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 108/262 (41%), Positives = 167/262 (63%)
Query: 259 QEVPETGVTFADVAGA-DQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
+E P+ VT++DV G DQ + +L+EVV+ L +P++Y LG + PKG LL GPPGTGKT
Sbjct: 169 EEKPD--VTYSDVGGCKDQIE-KLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
L ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDAV
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR+V
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
PD+AGR IL++H++ ++ +D+ ++ ++R P TGA+++++ EA + A R K
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 497 ISKDEISDALERIIAGPEKKNA 518
++ + +A+ +++ G K +A
Sbjct: 406 ATEKDFLEAINKVVKGYAKFSA 427
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 108/262 (41%), Positives = 167/262 (63%)
Query: 259 QEVPETGVTFADVAGA-DQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
+E P+ VT++DV G DQ + +L+EVV+ L +P++Y LG + PKG LL GPPGTGKT
Sbjct: 169 EEKPD--VTYSDVGGCKDQIE-KLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
L ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDAV
Sbjct: 226 LCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGA 285
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR+V
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 345
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
PD+AGR IL++H++ ++ +D+ ++ ++R P TGA+++++ EA + A R K
Sbjct: 346 ALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405
Query: 497 ISKDEISDALERIIAGPEKKNA 518
++ + +A+ +++ G K +A
Sbjct: 406 ATEKDFLEAINKVVKGYAKFSA 427
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ +T+ D+ G + +L+EVV+ L P+++ LG PKG LL GPPGTGKTL
Sbjct: 154 EEKPD--ITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTL 211
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARA+A F SE V+ +VG GA VR+LF+ AKSK CI+FIDE+DA+
Sbjct: 212 TARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSR 271
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +++ ++DGF + VL ATNRPD LDSAL+RPGR DR++
Sbjct: 272 GDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFS 331
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+ +++DV FE ++R P TG+D++++ EA + A R K I
Sbjct: 332 LPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTI 391
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ ++ A+ ++I G ++ +A
Sbjct: 392 TEKDLLLAINKVIHGCKQFSA 412
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ +T+ D+ G + +L+EVV+ L P+++ LG PKG LL GPPGTGKTL
Sbjct: 154 EEKPD--ITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTL 211
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARA+A F SE V+ +VG GA VR+LF+ AKSK CI+FIDE+DA+
Sbjct: 212 TARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSR 271
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +++ ++DGF + VL ATNRPD LDSAL+RPGR DR++
Sbjct: 272 GDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFS 331
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+ +++DV FE ++R P TG+D++++ EA + A R K I
Sbjct: 332 LPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTI 391
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ ++ A+ ++I G ++ +A
Sbjct: 392 TEKDLLLAINKVIHGCKQFSA 412
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 109/267 (40%), Positives = 163/267 (61%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG LL GPP
Sbjct: 155 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPP 214
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTL+ARA A + F A + V++F+G GA VRD F+ AK KAPCI+FIDEID
Sbjct: 215 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEID 274
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+R GR D
Sbjct: 275 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLD 334
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P R +ILQ+HSR + DV+FE+++R T F GA L+ + EA +LA R
Sbjct: 335 RKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 394
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
RD E++ ++ ++ + ++ A KK A
Sbjct: 395 RDATEVNHEDFNEGIIQVQA---KKKA 418
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 105/261 (40%), Positives = 163/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR IL++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 158 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 215
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 216 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 275
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 276 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 335
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 336 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 395
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 396 TEKDFLEAVNKVIKSYAKFSA 416
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 166 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 344 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 403
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 404 TEKDFLEAVNKVIKSYAKFSA 424
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 30 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 87
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 88 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 147
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 148 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 207
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 208 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 267
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 268 TEKDFLEAVNKVIKSYAKFSA 288
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 209 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 266
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 267 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 326
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 327 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 386
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 387 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 446
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 447 TEKDFLEAVNKVIKSYAKFSA 467
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 168 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 225
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 226 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 285
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 286 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 345
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 346 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 405
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 406 TEKDFLEAVNKVIKSYAKFSA 426
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/261 (39%), Positives = 162/261 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+E P+ VT++DV G + +L+EVV+ L +P+++ LG + PKG LL GPPGTGKTL
Sbjct: 167 EEKPD--VTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
ARAVA F SE V+ +VG GA VR+LFE A++K C++F DEIDA+
Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR++
Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD+ GR I ++H+R ++ +D+ FE ++R P TGA+++++ EA + A R K
Sbjct: 345 LPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIA 404
Query: 498 SKDEISDALERIIAGPEKKNA 518
++ + +A+ ++I K +A
Sbjct: 405 TEKDFLEAVNKVIKSYAKFSA 425
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 108/268 (40%), Positives = 164/268 (61%)
Query: 254 SKSKFQEVPET-GVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
++ K EV E ++D+ G D+ +L E + + + +K+ +G K PKG L+ GPP
Sbjct: 170 NRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPP 229
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 230 GTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELD 289
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS + V V+AATNRPD LD ALLR GR D
Sbjct: 290 AIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLD 349
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ + P+ R +ILQ+HSR + KDV+FE+++R T F GA L+ + EA ++A R
Sbjct: 350 RKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALR 409
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAV 519
R EI ++ + + +++ +KK+ +
Sbjct: 410 RGATEIDHEDFVEGITSVLS--KKKSTL 435
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 108/268 (40%), Positives = 164/268 (61%)
Query: 254 SKSKFQEVPET-GVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
++ K EV E ++D+ G D+ +L E + + + +K+ +G K PKG L+ GPP
Sbjct: 170 NRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPP 229
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 230 GTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELD 289
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS + V V+AATNRPD LD ALLR GR D
Sbjct: 290 AIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLD 349
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ + P+ R +ILQ+HSR + KDV+FE+++R T F GA L+ + EA ++A R
Sbjct: 350 RKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALR 409
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAV 519
R EI ++ + + +++ +KK+ +
Sbjct: 410 RGATEIDHEDFVEGITSVLS--KKKSTL 435
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 501 (181.4 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 99/243 (40%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 468 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 525
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 585
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 586 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD + +++ T GF+GADL + A LA R ++ EI
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 705
Query: 498 SKD 500
++
Sbjct: 706 RRE 708
Score = 417 (151.9 bits), Expect = 9.2e-36, Sum P(3) = 9.2e-36
Identities = 103/253 (40%), Positives = 143/253 (56%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G G S R K S AP + I
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACR----KKISPAPPPLKTAGIFKS 305
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 306 DDCFPSPQTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 364
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 365 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 424
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 425 MDLIDLEDETIDA 437
Score = 39 (18.8 bits), Expect = 4.0e-49, Sum P(2) = 4.0e-49
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 39 SRTKRTTQATAILRKELEPNNAS-SEAASKRRTVTT--EATMAALLL 82
S +K +TAIL+++ PN EA ++ +V + +A M L L
Sbjct: 5 SDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQL 51
Score = 37 (18.1 bits), Expect = 9.2e-36, Sum P(3) = 9.2e-36
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 421 IRKKMDLIDLEDETIDAEVMNSLAV 445
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 104/254 (40%), Positives = 158/254 (62%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
VT++DV G + +L+EVV+ L +P+K+ LG + PKG LL GPPGTGKTL ARAVA
Sbjct: 172 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN 231
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
F SE V+ +VG GA VR+LFE A+SK C++F DEIDA+
Sbjct: 232 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGG 291
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
++E ++T+ +L+ ++DGF + VL ATNRPD LD AL+RPGR DR+V PD GR
Sbjct: 292 DNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGR 351
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
I ++H+R ++ +D+ F+ ++R P TGA+++++ EA + A R K ++ + +
Sbjct: 352 SHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLE 411
Query: 505 ALERIIAGPEKKNA 518
A++++I K +A
Sbjct: 412 AVKKVIKSYAKFSA 425
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 106/264 (40%), Positives = 156/264 (59%)
Query: 263 ETG-VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLAR 320
E G +TF + G + EL+EV++ LKNP+ + +G K PKG LL GPPGTGKTLLA+
Sbjct: 174 EQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAK 233
Query: 321 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXX 380
AVA G F AS V+ ++G A +R++F AK PCI+F+DE+DA+
Sbjct: 234 AVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE 293
Query: 381 XXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 440
+ E ++T+ +LLT+MDGF ++ ATNRPD LD ALLRPGR DR+V + P+
Sbjct: 294 GTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353
Query: 441 VAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKD 500
AGR++I ++H+ + DFE + + GF GAD++N EA A R D I+ D
Sbjct: 354 EAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPD 413
Query: 501 EISDALERIIAGPEKKNAVVSDEK 524
++ A+ ++ A +K + +K
Sbjct: 414 DLMKAVRKV-AEVKKLEGTIEYQK 436
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 488 (176.8 bits), Expect = 6.3e-49, Sum P(3) = 6.3e-49
Identities = 105/244 (43%), Positives = 154/244 (63%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + ++G K P+G L+ GPPGTGKTL+ARAVA
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ +P I+FIDEID++
Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 336
Query: 385 NDEREQ-TINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ ++QLLT MDG S V+V+AATNRP+ +D AL R GRFDR+V V PD G
Sbjct: 337 NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 501
R++IL++H++ LA DVD E+I+ T G+ G+DL +L +EAA+ R D+ ++ +DE
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDE 456
Query: 502 ISDA 505
I DA
Sbjct: 457 I-DA 459
Score = 483 (175.1 bits), Expect = 5.0e-46, Sum P(2) = 5.0e-46
Identities = 113/306 (36%), Positives = 167/306 (54%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V + D+ G ++ K EL+E V + +K+ G KG L GPPGTGKTLL
Sbjct: 490 EVPN--VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G S VRD+F+KA++ APC+VF+DE+D++
Sbjct: 548 AKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARG 607
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ +NQLLTEMDG + V V+ ATNRPD +D AL+RPGR D+ + V
Sbjct: 608 ASAGDSGGG-DRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPL 666
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
PD R ILQ R +A+DVD +++ T GF+GADL+ ++ A LA + ++E
Sbjct: 667 PDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDI 726
Query: 499 K--DEISDALERIIAGPEKKNAVVSDEKKKLV--AYHEAGHALVGALMPEYDPVAKISII 554
K +E +A + E +A VS ++ V A A ++ A + Y+ A +
Sbjct: 727 KRENETGEAPADDVVMDE--DASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLT 784
Query: 555 PRGQAG 560
RG G
Sbjct: 785 SRGLTG 790
Score = 50 (22.7 bits), Expect = 6.3e-49, Sum P(3) = 6.3e-49
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 26 PKTRRLSVSFPFPSRTKRTTQATAILRKELEPNN-ASSEAASKRRTVTTEA--TMAALLL 82
P+ L P ATAILRK+ +PN+ +A + +V T + TM L L
Sbjct: 12 PEVEHLQGENPPKDTYSAEDTATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQL 71
Score = 40 (19.1 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 53 KELEPNNASSEAASKRRTVTTEATMAALLLSSIAPQALAVDN 94
K+ E + E K T + E T A+L P +L VD+
Sbjct: 10 KKPEVEHLQGENPPKD-TYSAEDTATAILRKKRKPNSLVVDD 50
Score = 39 (18.8 bits), Expect = 6.3e-49, Sum P(3) = 6.3e-49
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 649 QQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITT 686
Q+ ++ MA V DAEVR AY A Q++T+
Sbjct: 752 QRHHVEEAMKMARRSVSDAEVRRY--EAY--AHQLLTS 785
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 101/260 (38%), Positives = 158/260 (60%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
++FA V G ++ EL+EV++ LKNP+ + +G K PKG LL GPPGTGKTLLARAVA
Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
GV F +S V+ ++G A +R++F AK PC++F+DEIDA+
Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF ++ ATNRPD LD ALLRPGR DR++ + P+ GR
Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGR 308
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
++IL++H + ++D+E + + T G GADL+N++ EA +A + D + + ++
Sbjct: 309 MEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMS 368
Query: 505 ALERIIAGPEKKNAVVSDEK 524
A ++ A +K + +K
Sbjct: 369 AARKV-ADLKKLEGTIDYQK 387
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 108/267 (40%), Positives = 162/267 (60%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E + D+ G ++ EL E + + + +++ LG + PKG LL GPP
Sbjct: 154 SRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPP 213
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTL+ARA A + F A + V++F+G GA VRD F AK K+PCI+FIDEID
Sbjct: 214 GTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEID 273
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+R GR D
Sbjct: 274 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLD 333
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P R +ILQ+HSR + DV+FE+++R T F GA L+ + EA +LA R
Sbjct: 334 RKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALR 393
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
RD E++ ++ ++ + ++ A KK A
Sbjct: 394 RDATEVNHEDFNEGIIQVQA---KKKA 417
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 500 (181.1 bits), Expect = 8.6e-49, Sum P(2) = 8.6e-49
Identities = 98/243 (40%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD R+ IL+ + R +AKDVD + +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 487 (176.5 bits), Expect = 4.2e-47, Sum P(3) = 4.2e-47
Identities = 108/253 (42%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ L+ DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 8.6e-49, Sum P(2) = 8.6e-49
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 39 SRTKRTTQATAILRKELEPNNAS-SEAASKRRTVTT--EATMAALLL 82
S +K +TAIL+++ PN E+ ++ +V + +A M L L
Sbjct: 5 SDSKSDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQL 51
Score = 37 (18.1 bits), Expect = 4.2e-47, Sum P(3) = 4.2e-47
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 498 (180.4 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 99/244 (40%), Positives = 148/244 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP T T+ D+ G + K ELQE+V + +++PDK+ G + +G L GPPG GKTLL
Sbjct: 467 EVPNT--TWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLL 524
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VRD+F+KA+S APC++F DE+D++
Sbjct: 525 AKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARG 584
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 585 GNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD R IL+ + R LAK+VD I++ T GF+GADL + A LA R+ ++ EI
Sbjct: 645 PDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 704
Query: 498 SKDE 501
+++
Sbjct: 705 RREK 708
Score = 474 (171.9 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 104/254 (40%), Positives = 155/254 (61%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G L+ GPPGT
Sbjct: 187 KREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 246
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ +P I+FIDEIDA+
Sbjct: 247 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAI 306
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG +S +IV+AATNRP+ +D AL R GRFDR+
Sbjct: 307 APKRDKTHGEV--ER-RIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDRE 363
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR- 492
+ + PD GR+++L++H++ L DVD E+I+ + G GADL +L +EAA+ R
Sbjct: 364 IDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREK 423
Query: 493 -DLKEISKDEISDA 505
DL ++ D+I DA
Sbjct: 424 MDLIDLEDDKI-DA 436
Score = 38 (18.4 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 47 ATAILRKELEPNNASSEAA 65
ATAIL+++ PN E A
Sbjct: 10 ATAILKRKDRPNRLIVEEA 28
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 495 (179.3 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 98/243 (40%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD R+ IL+ + R +AKDVD + +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 487 (176.5 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 108/253 (42%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ L+ DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 40 (19.1 bits), Expect = 1.6e-48, Sum P(2) = 1.6e-48
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 39 SRTKRTTQATAILRKELEPN 58
S TK +TAIL+++ PN
Sbjct: 5 SDTKSDDLSTAILKQKSRPN 24
Score = 37 (18.1 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 107/264 (40%), Positives = 155/264 (58%)
Query: 254 SKSKFQEVPETGV-TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E T++DV G D+ EL E + +K DK+ +G + PKG L+ GPP
Sbjct: 165 SRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPP 224
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F AA + V++++G GA VRD F AK KAP I+FIDE+D
Sbjct: 225 GTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELD 284
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS + V VLAATNR DVLD ALLR GR D
Sbjct: 285 AIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLD 344
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P R +ILQ+HSR D+++++++R T F GA L+ + EA ++A R
Sbjct: 345 RKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALR 404
Query: 492 RDLKEISKDEISDALERIIAGPEK 515
+ ++ + + + A K
Sbjct: 405 NGQSSVKHEDFVEGISEVQARKSK 428
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 102/260 (39%), Positives = 161/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ V G D E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 167 EKVPDS--TYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 224
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 225 LARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 284
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 285 VEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 344
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD R +IL++HSR L + + +KI+ + PG +GA+++++ EA + A R +
Sbjct: 345 APDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHV 404
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 405 TQEDFEMAVGKVMQKDSEKN 424
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 97/245 (39%), Positives = 153/245 (62%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ ++ P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++HS D+D+E I + + GF GADL+N+ EA + A R D + +++++
Sbjct: 310 LDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 99/243 (40%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 202 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 259
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 260 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 319
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 320 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD + +++ T GF+GADL + A LA R ++ EI
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 439
Query: 498 SKD 500
++
Sbjct: 440 RRE 442
Score = 335 (123.0 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 75/170 (44%), Positives = 103/170 (60%)
Query: 337 EFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLL 396
E + G S +R FE+A+ AP I+FIDE+DA+ ER + ++QLL
Sbjct: 5 EIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEV--ER-RIVSQLL 61
Query: 397 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKA 456
T MDG + VIV+AATNRP+ +D AL R GRFDR+V + PD GR++ILQ+H++
Sbjct: 62 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK 121
Query: 457 LAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEISDA 505
LA DVD E++ T G GADL L +EAA+ A R+ + I +DE DA
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDA 171
Score = 37 (18.1 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 155 IRKKMDLIDLEDETIDAEVMNSLAV 179
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 104/264 (39%), Positives = 158/264 (59%)
Query: 263 ETG-VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLAR 320
E G ++F + G + EL+EV++ LKNP+ +T +G K PKG LL GPPGTGKTLLA+
Sbjct: 165 EPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAK 224
Query: 321 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXX 380
AVA G F AS V+ ++G A +R++F AK PCI+F+DE+DA+
Sbjct: 225 AVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE 284
Query: 381 XXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 440
+ E ++T+ +LL +MDGF ++ ATNRPD LD ALLR GR DR++ + P+
Sbjct: 285 GTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPN 344
Query: 441 VAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKD 500
AGR++I ++H+ A + DFE + + GF GAD++N++ EA A R D I ++
Sbjct: 345 EAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQN 404
Query: 501 EISDALERIIAGPEKKNAVVSDEK 524
++ A+ ++ A +K + EK
Sbjct: 405 DLMKAVRKV-ADVKKLEGKLDYEK 427
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 504 (182.5 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 99/243 (40%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQ++V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 97/243 (39%), Positives = 147/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP +T+ D+ G D K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPN--ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD R+ IL+ + R ++KDVD + +++ T GF+GADL + A LA R ++ EI
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEI 707
Query: 498 SKD 500
++
Sbjct: 708 RRE 710
Score = 492 (178.3 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 491 (177.9 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 97/237 (40%), Positives = 141/237 (59%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V + D+ G D+ K ELQE+V + ++ PDK+ G +G L GPPG GKTLL
Sbjct: 472 EVPH--VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VRD+F+KA+ APCI+F DE+D++
Sbjct: 530 AKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARG 589
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 590 GGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD+ R IL+ + R +AKDVD +S+ T GF+GADL + A LA R ++
Sbjct: 650 PDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIE 706
Score = 486 (176.1 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 106/253 (41%), Positives = 156/253 (61%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E + + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 192 KREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 251
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 252 GKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 311
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + V+V+AATNRP+ +D+AL R GRFDR+
Sbjct: 312 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDRE 368
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
+ + PD GR++ILQ+H++ L++DVD E+IS T G GADL L +EAA+ A R+
Sbjct: 369 IDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKK 428
Query: 494 LKEIS-KDEISDA 505
+ I +D+ DA
Sbjct: 429 MTLIDLEDDSIDA 441
Score = 38 (18.4 bits), Expect = 7.1e-48, Sum P(2) = 7.1e-48
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 47 ATAILRKELEPNNASSEAAS 66
+TAIL++++ PN + A+
Sbjct: 15 STAILKQKIRPNRLIVDEAT 34
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 493 (178.6 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 100/245 (40%), Positives = 148/245 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 470 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 527
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 439 PDVAGRVKILQVHSRGKALAK--DVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK- 495
PD RV IL+ + R +AK DVD E +++ T GF+GADL + A LA R ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 707
Query: 496 EISKD 500
EI ++
Sbjct: 708 EIRRE 712
Score = 492 (178.3 bits), Expect = 7.3e-48, Sum P(2) = 7.3e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 310 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 367 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 426
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 427 MDLIDLEDETIDA 439
Score = 37 (18.1 bits), Expect = 7.3e-48, Sum P(2) = 7.3e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 423 IRKKMDLIDLEDETIDAEVMNSLAV 447
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 504 (182.5 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 100/243 (41%), Positives = 148/243 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP+ VT+ D+ G + K ELQE+V + +++PDK+ G KG L GPPG GKTLL
Sbjct: 486 EVPQ--VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 543
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 544 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 603
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG S V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 604 GNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD RV IL+ + R +AKDVD E +++ T GF+GADL + A LA R ++ EI
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 723
Query: 498 SKD 500
++
Sbjct: 724 RRE 726
Score = 492 (178.3 bits), Expect = 8.9e-48, Sum P(2) = 8.9e-48
Identities = 109/253 (43%), Positives = 154/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 206 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 265
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+A+ AP I+FIDE+DA+
Sbjct: 266 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 325
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
ER + ++QLLT MDG + VIV+AATNRP+ +D AL R GRFDR+
Sbjct: 326 APKREKTHGEV--ER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 382
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
V + PD GR++ILQ+H++ LA DVD E+++ T G GADL L +EAA+ A R+
Sbjct: 383 VDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKK 442
Query: 494 LKEIS-KDEISDA 505
+ I +DE DA
Sbjct: 443 MDLIDLEDETIDA 455
Score = 37 (18.1 bits), Expect = 8.9e-48, Sum P(2) = 8.9e-48
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSLFI 714
I K+ + +E ET+D E SL +
Sbjct: 439 IRKKMDLIDLEDETIDAEVMNSLAV 463
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 101/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ V G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 151 EKVPDS--TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTL 208
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 209 LARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 268
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LD ALLRPGR DR++
Sbjct: 269 VEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 328
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
PD R IL++HSR L + ++ KI+ + PG +GA+++++ EA + A R +
Sbjct: 329 APDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHV 388
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 389 TQEDFEMAVGKVMQKDSEKN 408
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 97/245 (39%), Positives = 150/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
+ FA + G + EL+EV++ LKNP+ + +G K PKG LL GPPGTGKTLLARAVA
Sbjct: 134 INFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
F +S V+ ++G A +R++F AK PCI+F+DEIDA+
Sbjct: 194 SMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 253
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL ++DGF ++ ATNRPD LD ALLR GR DR++ + P+ GR
Sbjct: 254 DREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGR 313
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
++IL++HS + D+DFE + + + G GADL+N++ EA + A + I++D+ +
Sbjct: 314 LEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDFNR 373
Query: 505 ALERI 509
A+ ++
Sbjct: 374 AVRKV 378
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 105/255 (41%), Positives = 157/255 (61%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G + EL E + ++ DK+ LG K PKGCL+ GPP
Sbjct: 169 SRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPP 228
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A ++ F AA + V++F+G GA VRD F AK K+P I+FIDE+D
Sbjct: 229 GTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELD 288
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS + V V+AATNR D LD ALLR GR D
Sbjct: 289 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLD 348
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ RV IL++HSR A+ D+++E+++R T + GA L+++ EA ++A R
Sbjct: 349 RKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALR 408
Query: 492 RDLKEISKDEISDAL 506
+ +I+ + D +
Sbjct: 409 QGDTKINHEHFMDGI 423
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 116 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 175
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 176 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 235
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 236 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 295
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 296 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 355
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 356 RGATELTHE---DYMEGILEVQAKKKA 379
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 147 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 204
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 205 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 264
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 265 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 324
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 325 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 384
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 385 TQEDFEMAVAKVMQKDSEKN 404
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 120 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 179
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 180 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 239
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 240 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 299
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 300 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 359
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 360 RGATELTHE---DYMEGILEVQAKKKA 383
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 170 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 290 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 349
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 350 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 410 RGATELTHE---DYMEGILEVQAKKKA 433
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 128 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 187
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 188 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 247
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 248 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 307
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 308 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 367
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 368 RGATELTHE---DYMEGILEVQAKKKA 391
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 170 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 290 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 349
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 350 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 410 RGATELTHE---DYMEGILEVQAKKKA 433
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 177 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 236
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 237 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 296
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 297 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 356
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 357 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 416
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 417 RGATELTHE---DYMEGILEVQAKKKA 440
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 149 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 206
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 207 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 266
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 267 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 326
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 327 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 386
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 387 TQEDFEMAVAKVMQKDSEKN 406
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 149 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 206
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 207 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 266
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 267 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 326
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 327 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 386
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 387 TQEDFEMAVAKVMQKDSEKN 406
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 233 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 292
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 293 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 352
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 353 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 413 RGATELTHE---DYMEGILEVQAKKKA 436
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 170 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 229
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 230 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 289
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 290 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 349
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 350 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 410 RGATELTHE---DYMEGILEVQAKKKA 433
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/267 (40%), Positives = 160/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 233 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 292
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 293 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 352
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA ++A R
Sbjct: 353 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 413 RGATELTHE---DYMEGILEVQAKKKA 436
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 103/261 (39%), Positives = 159/261 (60%)
Query: 266 VTFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
++++DV G A+Q + EL+EVV+ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 147 ISYSDVGGLAEQIR-ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
+ F +S V+ ++G A +R++F A+ PCIVF+DEIDA+
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+ E ++T+ +LL ++DGF V V+ ATNRPD LD ALLRPGR DR++ + P+
Sbjct: 266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R++IL++HS ++DFE + + + GF+ ADL+N+ EA + A R + + + ++
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 504 DALERIIAGPEKKNAVVSDEK 524
A+ ++ G K+ D K
Sbjct: 386 KAVRKV--GDAKRLETKLDYK 404
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 103/261 (39%), Positives = 159/261 (60%)
Query: 266 VTFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
++++DV G A+Q + EL+EVV+ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 147 ISYSDVGGLAEQIR-ELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
+ F +S V+ ++G A +R++F A+ PCIVF+DEIDA+
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+ E ++T+ +LL ++DGF V V+ ATNRPD LD ALLRPGR DR++ + P+
Sbjct: 266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R++IL++HS ++DFE + + + GF+ ADL+N+ EA + A R + + + ++
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 504 DALERIIAGPEKKNAVVSDEK 524
A+ ++ G K+ D K
Sbjct: 386 KAVRKV--GDAKRLETKLDYK 404
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 141 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTL 198
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 378
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 379 TQEDFEMAVAKVMQKDSEKN 398
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/267 (40%), Positives = 158/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 158 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 217
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 218 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 277
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF N V V+AATNR D+LD ALLR GR D
Sbjct: 278 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLD 337
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR + DV+FE+++R T F GA + + EA ++A R
Sbjct: 338 RKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 397
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 398 RGATELNHE---DYMEGILEVQAKKKA 421
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 474 (171.9 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 99/265 (37%), Positives = 160/265 (60%)
Query: 254 SKSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPG 312
S K ++VP++ T+ V G DQ E++EV++ +K+P+ + +LG PKG LL GPPG
Sbjct: 166 SLMKVEKVPDS--TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPG 223
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID+
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 283
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
+ + E ++T+ +LL ++DGF + V+ TNR D+LD ALLRPGR DR
Sbjct: 284 IGSQRIEGEHG-DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
++ P+V R++IL++HSR L + +D KI+ +GA+++ + EA + A R
Sbjct: 343 KIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 493 DLKEISKDEISDALERIIAGPEKKN 517
+++++ A+ +++ +KN
Sbjct: 403 RRVHVTQEDFEMAVAKVMKQDAEKN 427
Score = 37 (18.1 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 653 SQKDYSMATADVV--DAE 668
+Q+D+ MA A V+ DAE
Sbjct: 408 TQEDFEMAVAKVMKQDAE 425
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 474 (171.9 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 99/265 (37%), Positives = 160/265 (60%)
Query: 254 SKSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPG 312
S K ++VP++ T+ V G DQ E++EV++ +K+P+ + +LG PKG LL GPPG
Sbjct: 166 SLMKVEKVPDS--TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPG 223
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID+
Sbjct: 224 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 283
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
+ + E ++T+ +LL ++DGF + V+ TNR D+LD ALLRPGR DR
Sbjct: 284 IGSQRIEGEHG-DSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDR 342
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
++ P+V R++IL++HSR L + +D KI+ +GA+++ + EA + A R
Sbjct: 343 KIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
Query: 493 DLKEISKDEISDALERIIAGPEKKN 517
+++++ A+ +++ +KN
Sbjct: 403 RRVHVTQEDFEMAVAKVMKQDAEKN 427
Score = 37 (18.1 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 653 SQKDYSMATADVV--DAE 668
+Q+D+ MA A V+ DAE
Sbjct: 408 TQEDFEMAVAKVMKQDAE 425
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 108/267 (40%), Positives = 159/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 135 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 194
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 195 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELD 254
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF + V V+AATNR D+LD ALLR GR D
Sbjct: 255 AIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLD 314
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV++E+++R T F GA + + EA I+A R
Sbjct: 315 RKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALR 374
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 375 RGATELTHE---DYMEGILEVQAKKKA 398
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 383
Query: 505 ALERI 509
A+ ++
Sbjct: 384 AVRKV 388
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 136 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 195
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 196 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 256 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 315
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 316 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 375
Query: 505 ALERI 509
A+ ++
Sbjct: 376 AVRKV 380
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 383
Query: 505 ALERI 509
A+ ++
Sbjct: 384 AVRKV 388
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 122 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 181
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 182 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 241
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 242 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 301
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 302 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 361
Query: 505 ALERI 509
A+ ++
Sbjct: 362 AVRKV 366
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 96/245 (39%), Positives = 151/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL+N+ EA + A R D + +++
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMK 383
Query: 505 ALERI 509
A+ ++
Sbjct: 384 AVRKV 388
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 97/244 (39%), Positives = 148/244 (60%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V++ ++ G EL+EVV+ L P+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
F +S V+ ++G A +R++F A+ PC++F+DEIDA+
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF S V ++ ATNRPDVLD ALLRPGR DR++ + P+ AGR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
V +L++H+ DVD+E I++ GF ADL+N+ EA + A R + + +++
Sbjct: 314 VDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMK 373
Query: 505 ALER 508
A+ +
Sbjct: 374 AVRK 377
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 101/263 (38%), Positives = 162/263 (61%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++VP++ T+ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGK
Sbjct: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 376 XXXXXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQV 434
D E ++T+ +LL ++DGF ++ + VL ATNR D+LD ALLRPGR DR++
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 435 TVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDL 494
P+ R IL++HSR L + +D +KI+ + G +GA+L+ + EA + A R
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
Query: 495 KEISKDEISDALERIIAGPEKKN 517
+++++ A+ +++ +KN
Sbjct: 389 VHVTQEDFEMAVAKVMKKDTEKN 411
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 101/263 (38%), Positives = 162/263 (61%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++VP++ T+ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGK
Sbjct: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
Query: 376 XXXXXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQV 434
D E ++T+ +LL ++DGF ++ + VL ATNR D+LD ALLRPGR DR++
Sbjct: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
Query: 435 TVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDL 494
P+ R IL++HSR L + +D +KI+ + G +GA+L+ + EA + A R
Sbjct: 329 EFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
Query: 495 KEISKDEISDALERIIAGPEKKN 517
+++++ A+ +++ +KN
Sbjct: 389 VHVTQEDFEMAVAKVMKKDTEKN 411
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 106/266 (39%), Positives = 155/266 (58%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
++ K EV E + D+ G D+ E+ E + + +K +++ LG K PKG L+ GPP
Sbjct: 195 NRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPP 254
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A E F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 255 GTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELD 314
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
AV + E ++T+ +LL ++DGF+ + + VLAATNR DVLD ALLR GR D
Sbjct: 315 AVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLD 374
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R ILQ+HSR + V++ +++R T F GA L+ + EA ++A R
Sbjct: 375 RKIEFPLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALR 434
Query: 492 RDLKEISKDEISDALERIIAGPEKKN 517
+ +I + DA+ + A + N
Sbjct: 435 KGHSKIGHENYVDAIAEVQAKKKDTN 460
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 102/270 (37%), Positives = 164/270 (60%)
Query: 254 SKSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPG 312
S K +++P++ T+ V G D+ E++EV++ +K+P+ + +LG PKG LL GPPG
Sbjct: 132 SLMKVEKIPDS--TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 189
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID+
Sbjct: 190 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDS 249
Query: 373 VXXXXXXXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
+ D E ++T+ +LL ++DGF + VL TNR D+LD ALLRPGR D
Sbjct: 250 IGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRID 309
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P AGR+ IL++HSR L + ++ +KIS + G +GA+L+ + EA + A R
Sbjct: 310 RKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALR 369
Query: 492 RDLKEISKDEISDALERIIAGPEKKNAVVS 521
+S+++ A+ +++ ++N ++
Sbjct: 370 ERRVHVSQEDFEMAVSKVMKKDSEQNMSIN 399
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 96/245 (39%), Positives = 149/245 (60%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V +A++ G Q EL+EV++ L NPD + +G PKGCLL GPPGTGKTLLARA+A
Sbjct: 139 VNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIAS 198
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 199 QMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSA 258
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ + P+ R
Sbjct: 259 DREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVAR 318
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E + + + F GADL+N+ EA + A R D + + +++
Sbjct: 319 MDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMK 378
Query: 505 ALERI 509
A+ +I
Sbjct: 379 AVRKI 383
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 99/260 (38%), Positives = 159/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ V G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 140 EKVPDS--TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTL 197
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 198 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 257
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LD ALLRPGR DR++
Sbjct: 258 IESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 317
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 318 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 377
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 378 TQEDFEMAVAKVMQKDSEKN 397
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 96/245 (39%), Positives = 150/245 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V+++++ G + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ +D P+ R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
+ IL++H+ ++D+E I + + GF GADL N+ EA + A R D + +++
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMK 369
Query: 505 ALERI 509
A+ ++
Sbjct: 370 AVRKV 374
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 100/264 (37%), Positives = 158/264 (59%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G DQ E++EV++ LK+P+ + +LG PKG LL GPPGTGKTL
Sbjct: 124 EKVPDS--TYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTL 181
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 182 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 241
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + ++ ATNR D+LD ALLRPGR DR++
Sbjct: 242 IDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFP 301
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P V R IL++HSR L + ++ KI+ + G +GA+L+ + EA + A R +
Sbjct: 302 PPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHV 361
Query: 498 SKDEISDALERIIAGPEKKNAVVS 521
++++ A +I+ + K VS
Sbjct: 362 TQEDFDLATAKILNKHDDKEVAVS 385
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 100/260 (38%), Positives = 160/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ + G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 136 EKVPDS--TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTL 193
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G GA VR+LF A+ AP I+F+DEID++
Sbjct: 194 LARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRL 253
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR D+LDSALLRPGR DR++
Sbjct: 254 EGGSGG-DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 312
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 313 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHV 372
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 373 TQEDFEMAVAKVMQKDSEKN 392
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 493 (178.6 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 115/327 (35%), Positives = 176/327 (53%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP T T+ D+ G + K EL+E V + +++P+K+ G + KG L GPPG GKTLL
Sbjct: 468 EVPTT--TWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLL 525
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR+LF+KA+ APC++F DE+D++
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRG 585
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 586 SSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
PD+ RV IL+ +AKDVD E + ++T GF+GADL + A LA R + I
Sbjct: 646 PDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIR---ESIE 702
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYH--EAGHALVGAL----MPEYDPVAKIS 552
KD I R +G K D ++ H EA + ++ + +Y+ A+
Sbjct: 703 KD-IESTKARQESGDTKMEDDSVDPVPEITRDHFQEAMRSARRSVSDNDIRKYESFAQTL 761
Query: 553 IIPRGQAGGLTFFAPSEERLESGLYSR 579
+ RG F P +E SG +++
Sbjct: 762 VQSRGLGNNFKF--PDQE--SSGQFNQ 784
Score = 444 (161.4 bits), Expect = 2.4e-39, P = 2.4e-39
Identities = 96/242 (39%), Positives = 142/242 (58%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + +G K PKG LL GPPG GKT++ARAVA
Sbjct: 199 VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVAN 258
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ AP I+FIDEID++
Sbjct: 259 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEV 318
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
ER + ++QLLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR
Sbjct: 319 --ER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEIS 503
++I+++H++ L + VD E ++ T G+ GADL L E+A+ R + I +DE
Sbjct: 376 LEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETI 435
Query: 504 DA 505
A
Sbjct: 436 SA 437
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 106/266 (39%), Positives = 158/266 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
++ K EV E F+D+ G D+ EL E V + + +K+ LG PKG +L GPP
Sbjct: 163 ARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPP 222
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 223 GTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 282
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL +++GFS + + V+AATNR D+L ALLR GR D
Sbjct: 283 AIGTKRFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDILP-ALLRSGRLD 341
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R +I+Q+HSR ++ DV+FE++SR T F GA + + EA ++A R
Sbjct: 342 RKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 401
Query: 492 RDLKEISKDEISDALERIIAGPEKKN 517
R ++ ++ DA+ + A +K N
Sbjct: 402 RSANSVTHEDFMDAIMEVQA-KKKAN 426
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 100/260 (38%), Positives = 159/260 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ V G D+ E++EV++ +K+P+ + ALG PKG LL GPPGTGKTL
Sbjct: 135 EKVPDS--TYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTL 192
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ F+G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 193 LARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 252
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + V+ ATNR DVLD ALLRPGR DR++
Sbjct: 253 LETGTG-DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFP 311
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P+ R+ IL++HSR L + ++ KI+ PG +GA+++ + EA + A R +
Sbjct: 312 PPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHV 371
Query: 498 SKDEISDALERIIAGPEKKN 517
++++ A+ +++ +KN
Sbjct: 372 TQEDFEMAVSKVMMKDSEKN 391
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 492 (178.3 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 98/273 (35%), Positives = 155/273 (56%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
E P T T++D+ G K ELQE+V + +++P+KY G + +G L GPPG GKTLL
Sbjct: 475 ETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VRD+F+KA++ APC++F DE+D++
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
PD A R++I + R L+ D+D +++ T GF+GADL + A LA R ++
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYH 531
+ E + +R G E ++D ++ H
Sbjct: 713 RQE-KERQDRSARGEELMEDELADPVPEITRAH 744
Score = 469 (170.2 bits), Expect = 2.4e-42, P = 2.4e-42
Identities = 100/253 (39%), Positives = 152/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R F + + +P I+FIDEIDA+
Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
+ ++ ++QLLT MDG + V+V+AATNRP+ +D AL R GRFDR+
Sbjct: 315 APKREKAH---GEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDRE 371
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
+ + PD GR++IL++H++ L +DVD E+++ GF GADL +L +EAAI R
Sbjct: 372 IDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREK 431
Query: 494 LKEIS-KDEISDA 505
++ I +D+ DA
Sbjct: 432 MELIDLEDDTIDA 444
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 492 (178.3 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 98/273 (35%), Positives = 155/273 (56%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
E P T T++D+ G K ELQE+V + +++P+KY G + +G L GPPG GKTLL
Sbjct: 475 ETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 532
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VRD+F+KA++ APC++F DE+D++
Sbjct: 533 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 592
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ INQ+LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
PD A R++I + R L+ D+D +++ T GF+GADL + A LA R ++
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKKKLVAYH 531
+ E + +R G E ++D ++ H
Sbjct: 713 RQE-KERQDRSARGEELMEDELADPVPEITRAH 744
Score = 469 (170.2 bits), Expect = 2.4e-42, P = 2.4e-42
Identities = 100/253 (39%), Positives = 152/253 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R F + + +P I+FIDEIDA+
Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314
Query: 374 XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 433
+ ++ ++QLLT MDG + V+V+AATNRP+ +D AL R GRFDR+
Sbjct: 315 APKREKAH---GEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDRE 371
Query: 434 VTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 493
+ + PD GR++IL++H++ L +DVD E+++ GF GADL +L +EAAI R
Sbjct: 372 IDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREK 431
Query: 494 LKEIS-KDEISDA 505
++ I +D+ DA
Sbjct: 432 MELIDLEDDTIDA 444
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 101/264 (38%), Positives = 159/264 (60%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K E+ E ++D+ G D+ EL E V + + +++ ++G K PKG L+ GPP
Sbjct: 152 SRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPP 211
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + + A + V++F+G GA VRD F AK K P I+FIDE+D
Sbjct: 212 GTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELD 271
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGFS ++ + V+AATNR D+LD ALLR GR D
Sbjct: 272 AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLD 331
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
R++ P+ R ILQ+HSR ++ DV+F++++R + F GA L+ + EA ++A R
Sbjct: 332 RKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR 391
Query: 492 RDLKEISKDEISDALERIIAGPEK 515
R E+ ++ + ++A +K
Sbjct: 392 RGGTELIHNDFVEGCVEVMAKKKK 415
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 97/246 (39%), Positives = 152/246 (61%)
Query: 266 VTFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
VT++ + G DQ + EL+EV++ L NP+ + +G PKGCLL GPPGTGKTLLARAVA
Sbjct: 138 VTYSAIGGLTDQIR-ELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVA 196
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
+ F +S V+ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 197 SQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 256
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+ E ++T+ +LL +MDGF V ++ ATNRPD LD ALLRPGR DR++ + P+
Sbjct: 257 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQA 316
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R++IL++H+ A ++D+E I + + F GADL+N+ EA + A R + + + + +
Sbjct: 317 RLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFM 376
Query: 504 DALERI 509
A+ ++
Sbjct: 377 KAVRKV 382
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 492 (178.3 bits), Expect = 2.7e-46, P = 2.7e-46
Identities = 105/244 (43%), Positives = 153/244 (62%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + A+G K P+G L+ GPPGTGKTL+ARAVA
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ AP I+FIDEID++
Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKT---- 326
Query: 385 NDEREQ-TINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ ++QLLT MDG S V+V+AATNRP+ +D AL R GRFDR+V + PD G
Sbjct: 327 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATG 386
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 501
R+++L++H++ LA DVD E ++ T G+ GAD+ +L +EAA+ R DL ++ +DE
Sbjct: 387 RLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDE 446
Query: 502 ISDA 505
I DA
Sbjct: 447 I-DA 449
Score = 475 (172.3 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 96/236 (40%), Positives = 138/236 (58%)
Query: 261 VPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
V VT+ DV G D+ K EL+E V++ + +PD+YT G KG L GPPGTGKTLLA
Sbjct: 479 VESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLA 538
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
+AVA E F S E + ++ G S +RD+F+KA++ AP +VF+DE+D++
Sbjct: 539 KAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGG 598
Query: 380 XXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
++ +NQLLTEMDG + V V+ ATNRPD +D A+LRPGR D+ + V P
Sbjct: 599 SLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLP 658
Query: 440 DVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
D R+ IL R L ++ I++ T GF+GADL ++ AA A + ++
Sbjct: 659 DENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIE 714
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 106/267 (39%), Positives = 158/267 (59%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E + + + +K+ LG + PKG L+ GPP
Sbjct: 165 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 224
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A + F A + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 225 GTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELD 284
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A + E ++T+ +LL ++DGF N+ V V+AATNR D+LD ALLR GR D
Sbjct: 285 ATGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLD 344
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 491
+++ P+ R +I+Q+HSR ++ DV++E+++R F GA + + EA ++A R
Sbjct: 345 QKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALR 404
Query: 492 RDLKEISKDEISDALERIIAGPEKKNA 518
R E++ + D +E I+ KK A
Sbjct: 405 RGTTELTHE---DYMEGILEVQAKKKA 428
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 464 (168.4 bits), Expect = 4.8e-46, Sum P(2) = 4.8e-46
Identities = 94/245 (38%), Positives = 145/245 (59%)
Query: 267 TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
++AD+ G + E++E V+ L +P+ Y +G K PKG +L GPPGTGKTLLA+AVA E
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
F SE ++ ++G G VR++F+ A+ AP IVFIDEIDAV
Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGE 310
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
E ++T+ +LL ++DGF V V+ ATNR D LD AL+RPGR DR++ + PD +
Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 446 KILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 505
+I Q+H+ ++ DVD E+ +GAD++ + EA +LA R +I++ ++ A
Sbjct: 371 RIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Query: 506 LERII 510
++ +
Sbjct: 431 RDKAL 435
Score = 37 (18.1 bits), Expect = 4.8e-46, Sum P(2) = 4.8e-46
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 158 ERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGDSGN-GLFSFV 215
E+++ S D + ++L D R + V V +LID +G+ I+ S G + SFV
Sbjct: 92 EQIKSSDDKNYVKLKIDDLRGSPVSVGTLEELID--ENHGI-IATSVGPEYYVNILSFV 147
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 464 (168.4 bits), Expect = 4.8e-46, Sum P(2) = 4.8e-46
Identities = 94/245 (38%), Positives = 145/245 (59%)
Query: 267 TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
++AD+ G + E++E V+ L +P+ Y +G K PKG +L GPPGTGKTLLA+AVA E
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
F SE ++ ++G G VR++F+ A+ AP IVFIDEIDAV
Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGE 310
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
E ++T+ +LL ++DGF V V+ ATNR D LD AL+RPGR DR++ + PD +
Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 446 KILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 505
+I Q+H+ ++ DVD E+ +GAD++ + EA +LA R +I++ ++ A
Sbjct: 371 RIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKA 430
Query: 506 LERII 510
++ +
Sbjct: 431 RDKAL 435
Score = 37 (18.1 bits), Expect = 4.8e-46, Sum P(2) = 4.8e-46
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 158 ERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGDSGN-GLFSFV 215
E+++ S D + ++L D R + V V +LID +G+ I+ S G + SFV
Sbjct: 92 EQIKSSDDKNYVKLKIDDLRGSPVSVGTLEELID--ENHGI-IATSVGPEYYVNILSFV 147
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 487 (176.5 bits), Expect = 4.9e-45, P = 4.9e-45
Identities = 101/274 (36%), Positives = 156/274 (56%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 473 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ +NQLLTEMDG + V ++ ATNRPD++DSALLRPGR D+ + +
Sbjct: 591 NSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL 650
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
PD R+ I + R +AKDVD +++ T GF+GAD+ + A A R ++++
Sbjct: 651 PDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDI 710
Query: 499 KDEISDALERIIAGPEK-KNAVVSDEKKKLVAYH 531
++E R PE + +V DE ++ A H
Sbjct: 711 ENE-----RRRSQNPEAMEEDMVDDEVSEIRAAH 739
Score = 483 (175.1 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 105/243 (43%), Positives = 150/243 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ AP I+FIDEID++
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---- 319
Query: 385 NDEREQTI-NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ I +QLLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD G
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEI 502
R+++L++H++ LA+DVD E+IS+ T G+ GADL L EAA+ R + I +D+
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439
Query: 503 SDA 505
DA
Sbjct: 440 IDA 442
Score = 49 (22.3 bits), Expect = 5.9e-46, Sum P(2) = 5.9e-46
Identities = 24/94 (25%), Positives = 39/94 (41%)
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
L A S E + L + + + V V+ E I G ENV + +Q
Sbjct: 445 LNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQ-ETVQYPVEHP 503
Query: 622 QMVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQ 654
+ E+FG S G + G PG G L + ++++
Sbjct: 504 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 537
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 98/267 (36%), Positives = 164/267 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ V G D+ E++EV++ +K+P+ + +LG PKG +L GPPGTGKTL
Sbjct: 136 EKVPDS--TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 193
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 194 LARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 253
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + + ++ ATNR D+LD ALLRPGR DR++
Sbjct: 254 VEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFP 313
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P VA R IL++HSR L + ++ KI+ + G +GAD++ + EA + A R +
Sbjct: 314 APTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHV 373
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEK 524
++++ A+ ++++ + + VS +K
Sbjct: 374 TQEDFELAVAKVMS--KNDDGAVSLQK 398
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 98/260 (37%), Positives = 148/260 (56%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + + G + +++EVV+ + NP Y +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
F S V+ ++G A +R++F AK PCI+F+DEIDA+
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +DGF V ++ ATNRPDVLD AL+RPGR DR++ + P+ R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
++IL++H+ D+D+E + R GF GADL+N+ EA + A R + +++
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 505 ALERIIAGPEKKNAVVSDEK 524
A +I G +K + EK
Sbjct: 374 AARKISEG-KKLEGKIEYEK 392
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 98/260 (37%), Positives = 148/260 (56%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + + G + +++EVV+ + NP Y +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
F S V+ ++G A +R++F AK PCI+F+DEIDA+
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
+ E ++T+ +LL +DGF V ++ ATNRPDVLD AL+RPGR DR++ + P+ R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD 504
++IL++H+ D+D+E + R GF GADL+N+ EA + A R + +++
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 505 ALERIIAGPEKKNAVVSDEK 524
A +I G +K + EK
Sbjct: 374 AARKISEG-KKLEGKIEYEK 392
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 95/246 (38%), Positives = 150/246 (60%)
Query: 266 VTFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
++++ V G DQ + EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 136 ISYSAVGGLGDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
F +S ++ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+ E ++T+ +LL ++DGF V ++ ATNRPDVLD ALLRPGR DR++ + P+
Sbjct: 255 ADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R+ IL++H+ G A ++D+E I + GF GADL+N+ EA + A R + + ++
Sbjct: 315 RMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFM 374
Query: 504 DALERI 509
A+ ++
Sbjct: 375 KAVRKL 380
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 487 (176.5 bits), Expect = 7.0e-46, Sum P(2) = 7.0e-46
Identities = 108/267 (40%), Positives = 153/267 (57%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V + D+ G ++ K EL E V + + +P+K+ G +G L GPPGTGKT+L
Sbjct: 492 EVPN--VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTML 549
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+AVA E F S E + ++ G S +RD+F+KA++ APC+VF+DE+D++
Sbjct: 550 AKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRG 609
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ +NQLLTEMDG + V V+ ATNRP+ LD+AL+RPGR D V V
Sbjct: 610 GSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPL 669
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS 498
PD A R IL+ R +A DVD E I+ +T GF+GADL + A LA +KE
Sbjct: 670 PDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLA----IKESI 725
Query: 499 KDEISDALERIIAGPEKKNAVVSDEKK 525
EI +R AG + K + DE++
Sbjct: 726 SAEIERQKQREAAGEDVK---MEDEEE 749
Score = 478 (173.3 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 103/244 (42%), Positives = 151/244 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + ++G K P+G L+ GPPGTGKTL+ARAVA
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ +P I+FIDEID++
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 337
Query: 385 NDEREQ-TINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ ++QLLT MDG S V+V+AATNRP+ +D AL R GRFDR+V + PD G
Sbjct: 338 NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 397
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 501
R++IL +H++ L +DVD E I+ T G+ G+DL +L +EAA+ R DL ++ +D
Sbjct: 398 RLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDT 457
Query: 502 ISDA 505
I DA
Sbjct: 458 I-DA 460
Score = 40 (19.1 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 625 ERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQ 654
++FG S G + G PG G L + ++++
Sbjct: 526 QKFGLSPSRGVLFYGPPGTGKTMLAKAVANE 556
Score = 39 (18.8 bits), Expect = 7.0e-46, Sum P(2) = 7.0e-46
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 47 ATAILRKELEPNN 59
+TAIL+K+ +PN+
Sbjct: 34 STAILKKKKKPNS 46
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 95/246 (38%), Positives = 151/246 (61%)
Query: 266 VTFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
++++ V G DQ + EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 136 ISYSAVGGLGDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
F +S ++ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+ E ++T+ +LL ++DGF V ++ ATNRPDVLD ALLRPGR DR++ + P+
Sbjct: 255 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R++IL++H+ G A ++D+E I + GF GADL+N+ EA + A R + + ++
Sbjct: 315 RMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFM 374
Query: 504 DALERI 509
A+ ++
Sbjct: 375 KAVRKL 380
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 94/246 (38%), Positives = 152/246 (61%)
Query: 266 VTFADVAG-ADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVA 323
V+++ V G +DQ + EL+E ++ L NP+ + +G K PKG LL GPPGTGKTLLARA+A
Sbjct: 137 VSYSAVGGLSDQIR-ELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 195
Query: 324 GEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXX 383
F +S ++ ++G A +R++F A+ PCI+F+DEIDA+
Sbjct: 196 SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 255
Query: 384 XNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
+ E ++T+ +LL ++DGF V ++ ATNRPDVLD ALLRPGR DR++ + P+
Sbjct: 256 ADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQA 315
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS 503
R+++L++H+ G A ++D+E + + GF GADL+N+ EA + A R + + ++
Sbjct: 316 RMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFM 375
Query: 504 DALERI 509
A+ ++
Sbjct: 376 KAVRKL 381
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 480 (174.0 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 97/248 (39%), Positives = 146/248 (58%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V + D+ G D+ K +L+E V + + +P+K+ G +G L GPPGTGKT+L
Sbjct: 489 EVPN--VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTML 546
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+AVA E F S E + ++ G S +RD+F+KA++ APCIVF+DE+D++
Sbjct: 547 AKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARG 606
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ +NQLLTEMDG + V V+ ATNRP+ LD AL RPGR D + V
Sbjct: 607 GSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPL 666
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EI 497
PD GR+ IL+ R ++ DVD + I+ +T GF+GADL + A +A + + +I
Sbjct: 667 PDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADI 726
Query: 498 SKDEISDA 505
++ + +A
Sbjct: 727 NRTKALEA 734
Score = 479 (173.7 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
Identities = 104/244 (42%), Positives = 151/244 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + ++G K P+G LL GPPGTGKTL+ARAVA
Sbjct: 219 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ +P I+FIDEID++
Sbjct: 279 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---- 334
Query: 385 NDEREQ-TINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ ++QLLT MDG S V+V+AATNRP+ +D AL R GRFDR+V + PD G
Sbjct: 335 NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 394
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 501
R++ILQ+H++ L DVD E+I+ T G+ G+D+ L +EAA+ R DL ++ +D
Sbjct: 395 RLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDT 454
Query: 502 ISDA 505
I DA
Sbjct: 455 I-DA 457
Score = 50 (22.7 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 23 PPTPKTRRLSVSFPFPSRTKRTTQATAILRKELEPNNAS-SEAASKRRTVT--TEATMAA 79
PP K VS + + ATAIL+K+ +PN ++A + ++ + +TM A
Sbjct: 9 PPKKKVNLADVSGA--DVKEESDVATAILKKKKKPNQLMVADATNDDNSIIALSNSTMEA 66
Query: 80 LLL 82
L L
Sbjct: 67 LQL 69
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 107/265 (40%), Positives = 153/265 (57%)
Query: 254 SKSKFQEVPETGVT-FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
S+ K EV E ++D+ G D+ EL E V +K DK+ LG K PKG L+ GPP
Sbjct: 184 SRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPP 243
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
GTGKTLLARA A ++G F AA + V++F+G GA VRD F AK KAP I+FIDE+D
Sbjct: 244 GTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELD 303
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 431
A+ + E ++T+ +LL ++DGF + V VLAATNR D LD ALLR GR D
Sbjct: 304 AIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLD 363
Query: 432 RQVTVDRPDVAGRVKILQVHSRGKALAKD-VDFEKISRRTPGFTGADLQNLMNEAAILAA 490
R++ P R +L++H+R + V++ +++R T F GA L+ + EA ++A
Sbjct: 364 RKIEFPLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIAL 423
Query: 491 RRDLKEISKDEISDALERIIAGPEK 515
R I ++ +A+ + A K
Sbjct: 424 RNGKSIIKHEDFVEAISEVQARKSK 448
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 483 (175.1 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 105/243 (43%), Positives = 150/243 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ AP I+FIDEID++
Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---- 319
Query: 385 NDEREQTI-NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ I +QLLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD G
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEIS-KDEI 502
R+++L++H++ LA+DVD E+IS+ T G+ GADL L EAA+ R + I +D+
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDS 439
Query: 503 SDA 505
DA
Sbjct: 440 IDA 442
Score = 477 (173.0 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 102/275 (37%), Positives = 154/275 (56%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 473 EVPN--VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 531 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 590
Query: 379 XXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++ +NQLLTEMDG + V ++ ATNRPD++DSALLRPGR D+ + +
Sbjct: 591 GGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIP 650
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDL-KE 496
PD R+ I + R +AKDVD +++ T GF+GAD+ + A A R ++ K+
Sbjct: 651 LPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKD 710
Query: 497 ISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYH 531
I K++ R PE DE ++ A H
Sbjct: 711 IEKEK------RRSENPEAMEEDGVDEVSEIKAAH 739
Score = 43 (20.2 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 625 ERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQ 654
E+FG S G + G PG G L + ++++
Sbjct: 507 EKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 537
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 94/254 (37%), Positives = 155/254 (61%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
+++P++ T+ V G ++ E++EV++ +K+P+ + +LG PKG LL GPPGTGKTL
Sbjct: 137 EKIPDS--TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTL 194
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 195 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 254
Query: 378 XXXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
D E ++T+ +LL ++DGF + V+ ATNR D+LD ALLRPGR DR++
Sbjct: 255 SDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 314
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE 496
P R +IL++HSR L + +D + I+ + G +GA+L+ + EA + A R
Sbjct: 315 PPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVH 374
Query: 497 ISKDEISDALERII 510
+++++ A+ +++
Sbjct: 375 VTQEDFELAVAKVL 388
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 480 (174.0 bits), Expect = 7.9e-44, P = 7.9e-44
Identities = 104/278 (37%), Positives = 158/278 (56%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 474 EVPN--VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++
Sbjct: 532 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRG 591
Query: 379 XXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDR 438
++ +NQLLTEMDG + V ++ ATNRPD++D ALLRPGR D+ + +
Sbjct: 592 NSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL 651
Query: 439 PDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDL-KEI 497
PD R +I + R +AKDVD +++ T GF+GAD+ + + A R ++ K+I
Sbjct: 652 PDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDI 711
Query: 498 SKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGH 535
K ER A E A+ DE++ +A +AGH
Sbjct: 712 EK-------ERKRA--ESPEAMEEDEEE--IAEIKAGH 738
Score = 479 (173.7 bits), Expect = 4.5e-45, Sum P(2) = 4.5e-45
Identities = 100/237 (42%), Positives = 146/237 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ AP I+FIDEID++
Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
Query: 385 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 444
ER + ++QLLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR
Sbjct: 325 --ER-RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 445 VKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
+++L++H++ LA+DVD E++S+ T G+ GADL L EAA+ R + I D+
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
Score = 48 (22.0 bits), Expect = 4.5e-45, Sum P(2) = 4.5e-45
Identities = 23/94 (24%), Positives = 40/94 (42%)
Query: 562 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVAR 621
L A S + ++ L + + + V V+ E I G ENV + +Q
Sbjct: 446 LNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQ-ETVQYPVEHP 504
Query: 622 QMVERFGFSKKIGQVAIGGPG-GNPFLGQQMSSQ 654
+ E+FG S G + G PG G L + ++++
Sbjct: 505 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 487 (176.5 bits), Expect = 5.4e-45, P = 5.4e-45
Identities = 98/251 (39%), Positives = 147/251 (58%)
Query: 261 VPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
V VT+ D+ G D K EL+E V++ + +PD+Y G KG L GPPGTGKTLLA
Sbjct: 480 VENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLA 539
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
+AVA E F S E + ++ G S +RD+F+KA++ AP +VF+DE+D++
Sbjct: 540 KAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGG 599
Query: 380 XXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
++ +NQLLTEMDG + V V+ ATNRPD +D ALLRPGR D+ + V P
Sbjct: 600 SHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLP 659
Query: 440 DVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EIS 498
D R+ ILQ R L +D +I++ T GF+GADL ++ +A A + ++ ++
Sbjct: 660 DEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVK 719
Query: 499 KDEISDALERI 509
++I + E++
Sbjct: 720 INKIKEEKEKV 730
Score = 482 (174.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 101/238 (42%), Positives = 147/238 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + ++G K PKG L+ GPPGTGKT++ARAVA
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ +P I+FIDEID++
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT---- 327
Query: 385 NDEREQ-TINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ ++QLLT MDG S V+V+AATNRP+ +D AL R GRFDR+V + PD G
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R++IL++H++ LA DVD E I+ T GF GAD+ +L +EAA+ R + I +E
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Score = 37 (18.1 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSL 712
I K+ + +E+ET+D E SL
Sbjct: 434 IREKMDLIDLEEETIDTEVLNSL 456
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 487 (176.5 bits), Expect = 5.4e-45, P = 5.4e-45
Identities = 98/251 (39%), Positives = 147/251 (58%)
Query: 261 VPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 319
V VT+ D+ G D K EL+E V++ + +PD+Y G KG L GPPGTGKTLLA
Sbjct: 480 VENVNVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLA 539
Query: 320 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXX 379
+AVA E F S E + ++ G S +RD+F+KA++ AP +VF+DE+D++
Sbjct: 540 KAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGG 599
Query: 380 XXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 439
++ +NQLLTEMDG + V V+ ATNRPD +D ALLRPGR D+ + V P
Sbjct: 600 SHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLP 659
Query: 440 DVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-EIS 498
D R+ ILQ R L +D +I++ T GF+GADL ++ +A A + ++ ++
Sbjct: 660 DEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQVK 719
Query: 499 KDEISDALERI 509
++I + E++
Sbjct: 720 INKIKEEKEKV 730
Score = 482 (174.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 101/238 (42%), Positives = 147/238 (61%)
Query: 266 VTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 324
V + D+ G + +++E+V+ L++P + ++G K PKG L+ GPPGTGKT++ARAVA
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVAN 271
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E G FF E + G S +R FE+A+ +P I+FIDEID++
Sbjct: 272 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT---- 327
Query: 385 NDEREQ-TINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAG 443
N E E+ ++QLLT MDG S V+V+AATNRP+ +D AL R GRFDR+V + PD G
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 444 RVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
R++IL++H++ LA DVD E I+ T GF GAD+ +L +EAA+ R + I +E
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Score = 37 (18.1 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 690 ILHKLAQLLIEKETVDGEEFMSL 712
I K+ + +E+ET+D E SL
Sbjct: 434 IREKMDLIDLEEETIDTEVLNSL 456
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 98/238 (41%), Positives = 147/238 (61%)
Query: 281 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 340
++ +V + + +K+ LG + PKG L+ GPPGTGKTLLARA A + F A + V+
Sbjct: 216 VEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQ 275
Query: 341 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMD 400
+F+G GA VRD F AK KAP I+FIDE+DA+ + E ++T+ +LL ++D
Sbjct: 276 MFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 335
Query: 401 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKD 460
GF N+ V V+AATNR D+LD ALLR GR DR++ P+ R +I+Q+HSR ++ D
Sbjct: 336 GFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPD 395
Query: 461 VDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 518
V++E+++R T F GA + + EA ++A RR E++ + D +E I+ KK A
Sbjct: 396 VNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHE---DYMEGILEVQAKKKA 450
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 92/253 (36%), Positives = 157/253 (62%)
Query: 259 QEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 317
++VP++ T+ V G + E++EV++ +K+P+ + +LG PKG +L GPPGTGKTL
Sbjct: 140 EKVPDS--TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 318 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXX 377
LARAVA F + +E V+ ++G G+ VR+LF A+ AP I+F+DEID++
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 257
Query: 378 XXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
+ E ++T+ +LL ++DGF + + ++ ATNR D+LD ALLRPGR DR++
Sbjct: 258 VEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFP 317
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 497
P VA R +IL++HSR L + ++ K++ + G +GAD++ + EA + A R +
Sbjct: 318 PPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHV 377
Query: 498 SKDEISDALERII 510
++++ A+ +++
Sbjct: 378 TQEDFELAVGKVM 390
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 481 (174.4 bits), Expect = 5.2e-44, P = 5.2e-44
Identities = 97/241 (40%), Positives = 145/241 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
E P T T++D+ G K ELQE+V + +++P+KY G + +G L GPPG GKTLL
Sbjct: 476 ETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VRD+F+KA++ APC++F DE+D++
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 379 XXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++ INQ+LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDL-KE 496
PD A R +IL+ R L+KD+D +++ T GF+GADL + A LA R + KE
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713
Query: 497 I 497
I
Sbjct: 714 I 714
Score = 480 (174.0 bits), Expect = 7.6e-44, P = 7.6e-44
Identities = 106/254 (41%), Positives = 154/254 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E + + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+ + P I+FIDEIDA+
Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315
Query: 374 XXXXXXXXXXXNDEREQTI-NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
N E E+ I +QLLT MDG G S ++V+AATNRP+ +D AL R GRFDR
Sbjct: 316 APKREKT----NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
++ + PD GR++IL++H++ LA DVD E+I+ GF GADL +L +EAA+ R
Sbjct: 372 EIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Query: 493 DLKEIS-KDEISDA 505
++ I +D+ DA
Sbjct: 432 KMELIDLEDDQIDA 445
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 481 (174.4 bits), Expect = 5.2e-44, P = 5.2e-44
Identities = 97/241 (40%), Positives = 145/241 (60%)
Query: 260 EVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 318
E P T T++D+ G K ELQE+V + +++P+KY G + +G L GPPG GKTLL
Sbjct: 476 ETPNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 319 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXX 378
A+A+A E F S E + ++ G + VRD+F+KA++ APC++F DE+D++
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 379 XXXXXXND-EREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD 437
++ INQ+LTEMDG + V ++ ATNRPD++D A+LRPGR D+ + +
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 438 RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDL-KE 496
PD A R +IL+ R L+KD+D +++ T GF+GADL + A LA R + KE
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713
Query: 497 I 497
I
Sbjct: 714 I 714
Score = 480 (174.0 bits), Expect = 7.6e-44, P = 7.6e-44
Identities = 106/254 (41%), Positives = 154/254 (60%)
Query: 255 KSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 313
K + +E + + D+ G + +++E+V+ L++P + A+G K P+G LL GPPGT
Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255
Query: 314 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
GKTL+ARAVA E G FF E + G S +R FE+ + P I+FIDEIDA+
Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315
Query: 374 XXXXXXXXXXXNDEREQTI-NQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
N E E+ I +QLLT MDG G S ++V+AATNRP+ +D AL R GRFDR
Sbjct: 316 APKREKT----NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
++ + PD GR++IL++H++ LA DVD E+I+ GF GADL +L +EAA+ R
Sbjct: 372 EIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIRE 431
Query: 493 DLKEIS-KDEISDA 505
++ I +D+ DA
Sbjct: 432 KMELIDLEDDQIDA 445
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 464 (168.4 bits), Expect = 5.7e-44, P = 5.7e-44
Identities = 97/255 (38%), Positives = 145/255 (56%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ TF D+ G + EL+E V+ L +P+ Y +G PKG +L G PGTGK
Sbjct: 173 KVEKTPKE--TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGK 230
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA F S+ V+ G GA VR +F+ AK +AP IVFIDEIDAV
Sbjct: 231 TLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGT 290
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V ++ ATNR D LD AL+RPGR DR++
Sbjct: 291 KRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIE 350
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
+ +PD R KI +H+ G + K V +E + + +GA+++ + EA +LA R K
Sbjct: 351 LPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRK 410
Query: 496 EISKDEISDALERII 510
+ D+ A++ ++
Sbjct: 411 CVGTDDFEKAVKSVM 425
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 463 (168.0 bits), Expect = 7.5e-44, P = 7.5e-44
Identities = 94/255 (36%), Positives = 147/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 174 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 231
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 232 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 291
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 292 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV +++ +GAD++ + EA ++A R
Sbjct: 352 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 411
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 412 KVTNEDFKKSKENVL 426
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 463 (168.0 bits), Expect = 7.5e-44, P = 7.5e-44
Identities = 94/255 (36%), Positives = 147/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 173 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 230
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 231 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 290
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 291 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 350
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV +++ +GAD++ + EA ++A R
Sbjct: 351 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 410
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 411 KVTNEDFKKSKENVL 425
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 479 (173.7 bits), Expect = 8.5e-44, P = 8.5e-44
Identities = 109/251 (43%), Positives = 150/251 (59%)
Query: 253 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPP 311
R K++ P + ++ +D+ G D EL E+V +K+P+ Y G P+G LL GPP
Sbjct: 158 RQKAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPP 217
Query: 312 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 371
G GKT+LA A+A E GVPF S +A V G +VR++FE+AKS APC++FIDEID
Sbjct: 218 GCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEID 277
Query: 372 AVXXXXXXXXXXXNDEREQTINQLLTEMD--GFSGNSG--VIVLAATNRPDVLDSALLRP 427
AV ER + + Q LT MD F G V+V+ ATNRPD LDSAL R
Sbjct: 278 AVTPKRESAQREM--ER-RIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRA 334
Query: 428 GRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAI 487
GRFDR++ + P R KIL+ ++G L+ D DF +++++TPG+ GADL+ L A I
Sbjct: 335 GRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGI 394
Query: 488 LAARRDLKEIS 498
+A +R EIS
Sbjct: 395 IAIKRIFNEIS 405
Score = 454 (164.9 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 99/248 (39%), Positives = 150/248 (60%)
Query: 258 FQEVPETGVTFADVAGADQAKLELQ-EVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
F VP GV++ ++ ++ELQ +V +K P+ Y ++G P G LL GPPG GKT
Sbjct: 483 FATVP--GVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKT 540
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
LLA+AVA E+ F S E + +VG VR +F +A++ +PC++F DE+DA+
Sbjct: 541 LLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPR 600
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
++ + +N LLTE+DG S SGV V+AATNRPD++D A+LRPGR D+ + V
Sbjct: 601 RDDSL---SEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLV 657
Query: 437 DRPDVAGRVKILQVHSRGKALAKDVDFEKISR--RTPGFTGADLQNLMNEAAILAARRDL 494
D PD RV+IL+ ++ L ++V+ + + R R F+GADL L+ EAA+ A R +
Sbjct: 658 DLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAV 717
Query: 495 -KEISKDE 501
+I+ +E
Sbjct: 718 FADIASNE 725
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 462 (167.7 bits), Expect = 9.8e-44, P = 9.8e-44
Identities = 98/258 (37%), Positives = 147/258 (56%)
Query: 254 SKSKFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPG 312
S K ++ P+ T+ADV G DQ E++E V+ L +P+ Y +G + PKG +L G PG
Sbjct: 175 SVMKLEKAPQE--TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPG 232
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
TGKTLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA
Sbjct: 233 TGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDA 292
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 432
V E ++T+ +LL ++DGF V VL ATNR + LD AL+RPGR DR
Sbjct: 293 VGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDR 352
Query: 433 QVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR 492
++ PD + +I Q+H+ L K+V+ E+ +GAD++ + EA +LA R
Sbjct: 353 KIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRE 412
Query: 493 DLKEISKDEISDALERII 510
++ ++ + E ++
Sbjct: 413 RRMRVTMEDFQKSKENVL 430
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 413 KVTNEDFKKSKENVL 427
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 413 KVTNEDFKKSKENVL 427
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 102 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 159
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 160 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 219
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 220 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 279
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 280 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 339
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 340 KVTNEDFKKSKENVL 354
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 413 KVTNEDFKKSKENVL 427
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 413 KVTNEDFKKSKENVL 427
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 413 KVTNEDFKKSKENVL 427
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 461 (167.3 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 94/255 (36%), Positives = 146/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KVEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV + + +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 413 KVTNEDFKKSKENVL 427
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 460 (167.0 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 105/252 (41%), Positives = 145/252 (57%)
Query: 253 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 312
++K++ E + V F DV G D E+ +++ +++P+ Y LG P+G LL GPPG
Sbjct: 143 KAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPG 202
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
GKTLLA A+AGE +P AA E V G ++R+LFE+A S APCI+FIDEIDA
Sbjct: 203 CGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDA 262
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGR 429
+ D + + QLLT MD + + V+V+ ATNRPD LD AL R GR
Sbjct: 263 ITPKREVAS---KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 319
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILA 489
FDR++ + PD A R +ILQ R L + DF ++ TPGF GADL L EAA+ A
Sbjct: 320 FDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 379
Query: 490 ARRDLKEISKDE 501
R L ++ + +
Sbjct: 380 VNRVLMKLQEQQ 391
Score = 264 (98.0 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 52/117 (44%), Positives = 76/117 (64%)
Query: 258 FQEVPETGVTFADVAGADQAKLEL-QEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
F VP VT+AD+ + + EL ++ ++NPD++ ALG P G LL GPPG GKT
Sbjct: 466 FVTVPN--VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 523
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 373
LLA+AVA E+G+ F S E + ++VG VR +F++AK+ APC++F DE+DA+
Sbjct: 524 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 580
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 458 (166.3 bits), Expect = 3.0e-43, P = 3.0e-43
Identities = 94/255 (36%), Positives = 147/255 (57%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 174 KLEKAPQE--TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 231
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDAV
Sbjct: 232 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGT 291
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 292 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 351
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I +H+ LA+DV+ ++ +GAD++ + EA ++A R
Sbjct: 352 FPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRM 411
Query: 496 EISKDEISDALERII 510
+++ ++ + E ++
Sbjct: 412 KVTNEDFKKSKESVL 426
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 475 (172.3 bits), Expect = 3.6e-43, P = 3.6e-43
Identities = 112/264 (42%), Positives = 156/264 (59%)
Query: 253 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 312
+SK K E+ + V F D G+D+ E+ +++ +++P+ Y LG P+G LL GPPG
Sbjct: 211 KSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIHMRHPEVYQRLGVVPPRGFLLHGPPG 270
Query: 313 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 372
GKTLLA+AVAGE +P +A E V G ++R+LFE+A S APCI+FIDEIDA
Sbjct: 271 CGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDA 330
Query: 373 VXXXXXXXXXXXNDEREQTINQLLTEMDGFSGN---SGVIVLAATNRPDVLDSALLRPGR 429
+ D + + QLLT MD + + V+V+ ATNRPD LD AL R GR
Sbjct: 331 ITPKRETAS---KDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGR 387
Query: 430 FDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILA 489
FDR++ + PD R+KIL+ R L D DF ++R TPG+ GADL L EAA+ A
Sbjct: 388 FDREICLGIPDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNA 447
Query: 490 ARRDLKE-ISKDEISD--ALERII 510
R L E ++D+I+ AL R++
Sbjct: 448 VNRILLEPTTEDQITPTLALARLL 471
Score = 444 (161.4 bits), Expect = 2.5e-39, P = 2.5e-39
Identities = 99/240 (41%), Positives = 139/240 (57%)
Query: 258 FQEVPETGVTFADVAGADQAKLELQ-EVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
F VP+ VT+ADV + EL ++ ++NP+++ ALG P G LL GPPG GKT
Sbjct: 511 FATVPD--VTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKT 568
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
LLA+AVA +G+ F S E + ++VG VR +F++ ++ APC++F DEIDA+
Sbjct: 569 LLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPR 628
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
+ + +NQLLTEMDG V ++AATNRPD++D A+LRPGR D+ + V
Sbjct: 629 RSEHESGAS---VRVVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYV 685
Query: 437 DRPDVAGRVKILQVHSRGKA---LAKDVDFEKISR--RTPGFTGADLQNLMNEAAILAAR 491
P A R IL ++G L DV E+I+ R FTGADL L+ EA + A R
Sbjct: 686 GLPPAADRHAILNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALR 745
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 457 (165.9 bits), Expect = 3.9e-43, P = 3.9e-43
Identities = 93/255 (36%), Positives = 145/255 (56%)
Query: 257 KFQEVPETGVTFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 315
K ++ P+ T+AD+ G D E++E V+ L +P+ Y +G K PKG +L GPPGTGK
Sbjct: 175 KLEKAPQE--TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 316 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXX 375
TLLA+AVA + F SE ++ ++G G VR+LF A+ P IVFIDEIDA+
Sbjct: 233 TLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGT 292
Query: 376 XXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVT 435
E ++T+ +LL ++DGF V V+ ATNR + LD AL+RPGR DR++
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIE 352
Query: 436 VDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK 495
PD + +I Q+H+ LA DV +++ +GAD++ + EA ++A R
Sbjct: 353 FPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRM 412
Query: 496 EISKDEISDALERII 510
+++ ++ + E +
Sbjct: 413 KVTNEDFKKSKENFL 427
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 455 (165.2 bits), Expect = 6.7e-43, P = 6.7e-43
Identities = 100/243 (41%), Positives = 146/243 (60%)
Query: 258 FQEVPETGVTFADVAGADQAKLEL-QEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKT 316
F VP VT+AD+ + + EL ++ ++NPD++ ALG P G LL GPPG GKT
Sbjct: 296 FVTVPN--VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 353
Query: 317 LLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXX 376
LLA+AVA E+G+ F S E + ++VG VR +F++AK+ APC++F DE+DA+
Sbjct: 354 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 413
Query: 377 XXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 436
+ + +NQLLTEMDG V ++AATNRPD++D A+LRPGR D+ + V
Sbjct: 414 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 470
Query: 437 DRPDVAGRVKILQVHSRGKA---LAKDVDFEKISR--RTPGFTGADLQNLMNEAAILAAR 491
P A R+ IL+ ++ L DV+ E I+ R +TGADL L+ EA+I A R
Sbjct: 471 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 530
Query: 492 RDL 494
+++
Sbjct: 531 QEM 533
Score = 318 (117.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 75/180 (41%), Positives = 100/180 (55%)
Query: 325 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXX 384
E +P AA E V G ++R+LFE+A S APCI+FIDEIDA+
Sbjct: 45 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVAS--- 101
Query: 385 NDEREQTINQLLTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 441
D + + QLLT MD + + V+V+ ATNRPD LD AL R GRFDR++ + PD
Sbjct: 102 KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 161
Query: 442 AGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 501
A R +ILQ R L + DF ++ TPGF GADL L EAA+ A R L ++ + +
Sbjct: 162 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ 221
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 455 (165.2 bits), Expect = 6.7e-43, P = 6.7e-43
Identities = 98/254 (38%), Positives = 146/254 (57%)
Query: 267 TFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 325
++AD+ G + E++E V+ L +P+ Y +G K PKG +L G PGTGKTLLA+AVA
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 326 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXN 385
F SE ++ ++G G VR+LF A +P IVFIDEIDAV
Sbjct: 246 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGE 305
Query: 386 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 445
E ++T+ +LL ++DGF V V+ ATNR + LD ALLRPGR DR++ PD+ R
Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR 365
Query: 446 KILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 505
+I Q+H+ LA+DV+ E+ F+GAD++ + EA +LA R +++ + A
Sbjct: 366 RIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKA 425
Query: 506 LERIIAGPEKKNAV 519
E+++ +KK V
Sbjct: 426 KEKVMF--KKKEGV 437
WARNING: HSPs involving 479 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 723 667 0.00098 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 729
No. of states in DFA: 597 (63 KB)
Total size of DFA: 264 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.09u 0.08s 56.17t Elapsed: 00:00:03
Total cpu time: 56.14u 0.08s 56.22t Elapsed: 00:00:03
Start: Fri May 10 14:28:52 2013 End: Fri May 10 14:28:55 2013
WARNINGS ISSUED: 2