BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004923
         (723 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225432422|ref|XP_002277919.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|297736933|emb|CBI26134.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score = 1340 bits (3468), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/719 (89%), Positives = 679/719 (94%), Gaps = 4/719 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MAL   SFP + S+A  S P + +P  SH F        S +    + + +KRPNGVCAS
Sbjct: 1   MALCTLSFPAHFSQAAASNPQRLTPQCSHLFLGVDLQCQSQQ----RSKARKRPNGVCAS 56

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           LS+R EYHSQRPPTPLLDTINYPIHMKNLS++ELKQLADELR+DV+FNVSKTGGHLGSSL
Sbjct: 57  LSDREEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVVFNVSKTGGHLGSSL 116

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRD+MHTMRQTDGL+GFTKRSESE
Sbjct: 117 GVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDQMHTMRQTDGLAGFTKRSESE 176

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YDCFGTGHSST+ISAGLGMAVGRDLKG+ NNV+AVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 177 YDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDM 236

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE
Sbjct: 237 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 296

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLVAIL+EVK+TKTTGPVLIHV
Sbjct: 297 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSTKTTGPVLIHV 356

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSSA TQSYTTYFAEALIAEAEVDKD+V
Sbjct: 357 VTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAPTQSYTTYFAEALIAEAEVDKDIV 416

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEG+KPFCAIYSSFMQRAY
Sbjct: 417 AIHAAMGGGTGLNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAY 476

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPV+FAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAP+DEAELFHM
Sbjct: 477 DQVVHDVDLQKLPVKFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPADEAELFHM 536

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRYPRGNG+GVELPPGNKGIP+EVG+GRILIEGERVALLGYGTAVQS
Sbjct: 537 VATAAAIDDRPSCFRYPRGNGVGVELPPGNKGIPIEVGRGRILIEGERVALLGYGTAVQS 596

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL AS+LLE +GLR+TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV QFL
Sbjct: 597 CLVASSLLEQHGLRITVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFL 656

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           A +GLLDGT KW P+VLPDRYIDHG+PADQLA AGLTPSHIAATVFNILGQTREALEIM
Sbjct: 657 ALNGLLDGTTKWSPMVLPDRYIDHGAPADQLAMAGLTPSHIAATVFNILGQTREALEIM 715


>gi|255551595|ref|XP_002516843.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223543931|gb|EEF45457.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 720

 Score = 1330 bits (3441), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/723 (89%), Positives = 679/723 (93%), Gaps = 7/723 (0%)

Query: 1   MALSAFSFPTYVSKAT--NSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGV 57
           MAL AFSFP + +K T  +S   KS+ V+S+F     L      K +    Q KKRP GV
Sbjct: 1   MALCAFSFPAHANKVTTASSDLQKSNYVSSNFLLKTDLLGQSMQKFN----QGKKRPAGV 56

Query: 58  CASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLG 117
           CASLSE GEYHSQRPPTPLLDTINYPIHMKNLSI+ELKQL+DELR+DVIFNVS TGGHLG
Sbjct: 57  CASLSETGEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLSDELRSDVIFNVSITGGHLG 116

Query: 118 SSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRS 177
           SSLGV+ELTVALHYVFNAP+D+ILWDVGHQ+YPHKILTGRRDKM TMRQT+GLSGFTKRS
Sbjct: 117 SSLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMQTMRQTNGLSGFTKRS 176

Query: 178 ESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 237
           ESEYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD
Sbjct: 177 ESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 236

Query: 238 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           SDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSN+PLRELREVAKGVTK+IGGP
Sbjct: 237 SDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGP 296

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL+EVK+TKTTGPVL
Sbjct: 297 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILKEVKSTKTTGPVL 356

Query: 358 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 417
           IHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQSYTTYFAEALIAEAEVDK
Sbjct: 357 IHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSASTQSYTTYFAEALIAEAEVDK 416

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
           DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ
Sbjct: 417 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 476

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAEL
Sbjct: 477 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAEL 536

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           FHMVATAAAIDDRPSCFRYPRGNGIGV+LPPGNKGIPLEVGKGRILIEGERVALLGYG+A
Sbjct: 537 FHMVATAAAIDDRPSCFRYPRGNGIGVQLPPGNKGIPLEVGKGRILIEGERVALLGYGSA 596

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           VQSCLAA++L+E+  LR+TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 
Sbjct: 597 VQSCLAAASLMETYDLRITVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVA 656

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            FLA DGLLDG +KWRP++LPDRYIDHGSPADQL +AGLTPSHIAAT+FNILG  REAL+
Sbjct: 657 HFLALDGLLDGKLKWRPVILPDRYIDHGSPADQLVEAGLTPSHIAATIFNILGNKREALQ 716

Query: 718 IMS 720
           IMS
Sbjct: 717 IMS 719


>gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 720

 Score = 1320 bits (3415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/721 (88%), Positives = 676/721 (93%), Gaps = 3/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAA-LFSHFSHKLDNHQIQLKKRPNGVCA 59
           MALSA SFP +V++ T S   K S V+SHF       +   H+L+  Q + K+RP  VCA
Sbjct: 1   MALSACSFPAHVNRNTISDLQKYSYVSSHFLSRKNPLAQSLHRLN--QAKSKRRPERVCA 58

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSER EYHSQRPPTPLLDTINYPIHMKNLSI+ELKQLADELR+DVIFNVS TGGHLGSS
Sbjct: 59  SLSEREEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLADELRSDVIFNVSGTGGHLGSS 118

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFNAP+D+ILWDVGHQ+YPHKILTGRRDKMHT+RQT+GLSGFTKRSES
Sbjct: 119 LGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTIRQTNGLSGFTKRSES 178

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 179 EYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 238

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK+IGG MH
Sbjct: 239 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRIGGSMH 298

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+AIL+EVK TKTTGPVLIH
Sbjct: 299 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKGTKTTGPVLIH 358

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQSYTTYFAEALIAEAEVDKD+
Sbjct: 359 VVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSAITQSYTTYFAEALIAEAEVDKDI 418

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA
Sbjct: 419 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 478

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELFH
Sbjct: 479 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFH 538

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNG+GV+LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ
Sbjct: 539 MVATAAAIDDRPSCFRYPRGNGVGVQLPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 598

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           SCLAA++L+E +GL +TVADARFCKPLDH LIRSLAK HEVLITVEEGSIGGFGSHV  F
Sbjct: 599 SCLAAASLVEPHGLLITVADARFCKPLDHTLIRSLAKPHEVLITVEEGSIGGFGSHVAHF 658

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           LA DGLLDG +KWRPLVLPDRYIDHGSP+ QL +AGLTPSH+AATV NILG  REAL+IM
Sbjct: 659 LALDGLLDGKLKWRPLVLPDRYIDHGSPSVQLIEAGLTPSHVAATVLNILGNKREALQIM 718

Query: 720 S 720
           S
Sbjct: 719 S 719


>gi|189017038|gb|ACD70396.1| putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase
           [Populus trichocarpa]
          Length = 685

 Score = 1315 bits (3403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/683 (91%), Positives = 663/683 (97%), Gaps = 1/683 (0%)

Query: 39  FSHKLDN-HQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQL 97
            S  LD  +QI +KKR NG+CASLSERGEYHSQRPPTPLLDTINYPIHMKNLS++ELKQL
Sbjct: 2   LSQSLDKINQIHVKKRANGICASLSERGEYHSQRPPTPLLDTINYPIHMKNLSVKELKQL 61

Query: 98  ADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGR 157
           ADELR+DVIFNVSKTGGHLGSSLGV+ELTVALHYVFNAP+D+ILWDVGHQ+YPHKILTGR
Sbjct: 62  ADELRSDVIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGR 121

Query: 158 RDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIG 217
           RDKMHT+RQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG  N VVAVIG
Sbjct: 122 RDKMHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGGTNKVVAVIG 181

Query: 218 DGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN 277
           DGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSN
Sbjct: 182 DGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSN 241

Query: 278 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 337
           RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+
Sbjct: 242 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNI 301

Query: 338 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 397
           DDL+AIL+EVK+TKTTGPVLIHVVTEKGRGYP+AE+AADKYHGVAKFDPATGKQFK+S  
Sbjct: 302 DDLIAILKEVKSTKTTGPVLIHVVTEKGRGYPFAERAADKYHGVAKFDPATGKQFKASPS 361

Query: 398 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 457
           TQSYTTYFAEAL AEAEVDKD+VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA
Sbjct: 362 TQSYTTYFAEALTAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 421

Query: 458 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 517
           AGLACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV
Sbjct: 422 AGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDV 481

Query: 518 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 577
           TFMACLPNMVVMAPSDEAELFHMVATA AIDDRPSCFRYPRGNG+GV+LPPGNKG+PLEV
Sbjct: 482 TFMACLPNMVVMAPSDEAELFHMVATATAIDDRPSCFRYPRGNGVGVQLPPGNKGVPLEV 541

Query: 578 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 637
           GKGR+LIEGERVALLGYGTAVQSCLAA++LLE +G+RLTVADARFCKPLDHALIRSLAKS
Sbjct: 542 GKGRMLIEGERVALLGYGTAVQSCLAAASLLERHGIRLTVADARFCKPLDHALIRSLAKS 601

Query: 638 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 697
           HE+LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHGSPADQL +AGLT
Sbjct: 602 HEILITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPVVLPDRYIDHGSPADQLVEAGLT 661

Query: 698 PSHIAATVFNILGQTREALEIMS 720
           PSHIAATVF+ILGQ REALEIMS
Sbjct: 662 PSHIAATVFSILGQRREALEIMS 684


>gi|164604984|dbj|BAF98288.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 720

 Score = 1314 bits (3400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/721 (88%), Positives = 676/721 (93%), Gaps = 3/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSH-FFGAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MALSA SFP +V KAT S   K   V S   +   L +    +L+  Q + KK P G+CA
Sbjct: 1   MALSACSFPAHVDKATISDLQKYGYVPSRSLWRTDLLAQSLGRLN--QAKSKKGPGGICA 58

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSERGEYHSQRPPTPLLDT NYPIHMKNLSI+ELKQLADELR+DVIFNVS+TGGHLGSS
Sbjct: 59  SLSERGEYHSQRPPTPLLDTTNYPIHMKNLSIKELKQLADELRSDVIFNVSRTGGHLGSS 118

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVF+AP+D+ILWDVGHQ+YPHKILTGRR+KM+T+RQT+GLSGFTKRSES
Sbjct: 119 LGVVELTVALHYVFSAPRDKILWDVGHQSYPHKILTGRREKMYTIRQTNGLSGFTKRSES 178

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYDCFGTGHSST+ISAGLGMAVGRDLKG+KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 179 EYDCFGTGHSSTTISAGLGMAVGRDLKGKKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 238

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH
Sbjct: 239 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 298

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           E AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+AIL+EVK+TKTTGPVLIH
Sbjct: 299 EWAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPVLIH 358

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQSYTTYFAEALIAEAEVDKD+
Sbjct: 359 VVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSAITQSYTTYFAEALIAEAEVDKDI 418

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA
Sbjct: 419 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 478

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELFH
Sbjct: 479 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFH 538

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNG+GV+LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ
Sbjct: 539 MVATAAAIDDRPSCFRYPRGNGVGVQLPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 598

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           SCLAA++L+E +GL +TVADARFCKPLDH LIRSLAKSHEVLITVEEGSIGGFGSHV  F
Sbjct: 599 SCLAAASLVEPHGLLITVADARFCKPLDHTLIRSLAKSHEVLITVEEGSIGGFGSHVAHF 658

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           LA DGLLDG +KWRPLVLPDRYIDHGSP+ QL +AGLTPSH+AATV NILG  REAL+IM
Sbjct: 659 LALDGLLDGKLKWRPLVLPDRYIDHGSPSVQLIEAGLTPSHVAATVLNILGNKREALQIM 718

Query: 720 S 720
           S
Sbjct: 719 S 719


>gi|343466207|gb|AEM42997.1| 1-deoxyxylulose-5-phosphate synthase [Siraitia grosvenorii]
          Length = 719

 Score = 1307 bits (3383), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/721 (87%), Positives = 673/721 (93%), Gaps = 3/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHF-FGAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MAL   +FP +VS+        SS V+S F +G  L   F  KL+  Q Q+ KRP G+ A
Sbjct: 1   MALCTLTFPAHVSRVAAKEHEGSSAVSSRFLWGTDLLFRFQKKLN--QRQVSKRPGGIYA 58

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSE GEY SQRPPTPLLDTINYPIHMKNLSI+EL QLADE+R+DVIFNVSKTGGHLGSS
Sbjct: 59  SLSETGEYPSQRPPTPLLDTINYPIHMKNLSIKELYQLADEVRSDVIFNVSKTGGHLGSS 118

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM T+RQT+GLSGFTKRSES
Sbjct: 119 LGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTIRQTNGLSGFTKRSES 178

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           E+DCFG GHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 179 EFDCFGAGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 238

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH
Sbjct: 239 MIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 298

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV+IL+EVK+T TTGPVLIH
Sbjct: 299 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVSILKEVKSTNTTGPVLIH 358

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAE+AADKYHGV KFDPATGKQ KS   TQSYTTYFAEAL+AEAEVDKD+
Sbjct: 359 VVTEKGRGYPYAERAADKYHGVTKFDPATGKQQKSKGATQSYTTYFAEALVAEAEVDKDI 418

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           +AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFMQRA
Sbjct: 419 IAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLASEGLKPFCAIYSSFMQRA 478

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA LF+
Sbjct: 479 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAGLFN 538

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG+P+EVGKGRIL+EGERVALLGYGTAVQ
Sbjct: 539 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGVPVEVGKGRILLEGERVALLGYGTAVQ 598

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           +CL A++L+E +GLR+TVAD RFCKPLD ALIRSLAKSHE+LITVEEGSIGGFGSHV+QF
Sbjct: 599 NCLTAASLVERHGLRITVADGRFCKPLDRALIRSLAKSHEILITVEEGSIGGFGSHVIQF 658

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           LA DGLLDG ++WRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQTREALEIM
Sbjct: 659 LALDGLLDGNLRWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNMLGQTREALEIM 718

Query: 720 S 720
           S
Sbjct: 719 S 719


>gi|449454454|ref|XP_004144970.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449473276|ref|XP_004153837.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449507648|ref|XP_004163093.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 718

 Score = 1307 bits (3382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/722 (87%), Positives = 677/722 (93%), Gaps = 6/722 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSS-PVTSHF-FGAALFSHFSHKLDNHQIQLKKRPNGVC 58
           MAL   +FP +VS+        SS  V+S F +G  L   F  +++    Q+KKRP G+C
Sbjct: 1   MALCMLTFPAHVSRVGLKEHDGSSVAVSSRFLWGTDLVFRFQKRVN----QVKKRPGGIC 56

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ASLSE GEY SQRPPTPLLDTINYPIHMKNLS++EL QLADE+R+DVIFNVSKTGGHLGS
Sbjct: 57  ASLSETGEYPSQRPPTPLLDTINYPIHMKNLSVKELYQLADEVRSDVIFNVSKTGGHLGS 116

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM T+RQT+GLSGFTKRSE
Sbjct: 117 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTIRQTNGLSGFTKRSE 176

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SE+D FG GHSST+ISAGLGMAVGRDLKGRKNNV+AVIGDGAMTAGQAYEAMNNAGYLDS
Sbjct: 177 SEFDSFGAGHSSTTISAGLGMAVGRDLKGRKNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 236

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           DMIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM
Sbjct: 237 DMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 296

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLV+IL+EVK+TKTTGPVLI
Sbjct: 297 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVSILKEVKSTKTTGPVLI 356

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYAEKAADKYHGV KFDPATGKQ K+ A TQSYTTYFAEALIAEAE DKD
Sbjct: 357 HVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQQKAKAPTQSYTTYFAEALIAEAERDKD 416

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           ++AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR
Sbjct: 417 IIAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 476

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE ELF
Sbjct: 477 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDETELF 536

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           +MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP+EVGKGRIL+EGERVALLGYGTAV
Sbjct: 537 NMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPIEVGKGRILLEGERVALLGYGTAV 596

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+CLAA++++E +GLR+TVAD RFCKPLD ALIRSLAKSHE+LITVEEGSIGGFGSHV+Q
Sbjct: 597 QNCLAAASMVERHGLRITVADGRFCKPLDRALIRSLAKSHEILITVEEGSIGGFGSHVIQ 656

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           FLA DGLLDG++KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQTREALEI
Sbjct: 657 FLALDGLLDGSLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNMLGQTREALEI 716

Query: 719 MS 720
           M+
Sbjct: 717 MT 718


>gi|408537471|gb|AFU75321.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Aquilaria sinensis]
          Length = 717

 Score = 1300 bits (3364), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/722 (87%), Positives = 670/722 (92%), Gaps = 7/722 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKS--SPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVC 58
           MALSAF F  + + AT+S P K   SP     FG+ L     H L  +Q ++ +     C
Sbjct: 1   MALSAFPFCAHANPATSSNPKKCAHSP-----FGSDLIFQSLHNLKLNQAKVGRWSGEAC 55

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ASLS R EYHSQR PTPLLDTINYPIHMKNLSI+ELKQLA+ELR+DVIFNVS+TGGHLGS
Sbjct: 56  ASLSGRAEYHSQRQPTPLLDTINYPIHMKNLSIKELKQLAEELRSDVIFNVSETGGHLGS 115

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALHYVFNAP+D+ILWDVGHQ+YPHKILTGRRD+MHTMRQT+GLSGFTKRSE
Sbjct: 116 SLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDRMHTMRQTNGLSGFTKRSE 175

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYDCFGTGHSST+ISAGLGMAVGRDLKG++NNVVAVIGDGAMTAGQAYEAMNNAGYLDS
Sbjct: 176 SEYDCFGTGHSSTTISAGLGMAVGRDLKGKRNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 235

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           DMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSNRPLRELREVAKGVTKQ+ GPM
Sbjct: 236 DMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSNRPLRELREVAKGVTKQLPGPM 295

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL+EVK+TKTTGPVLI
Sbjct: 296 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILKEVKSTKTTGPVLI 355

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYAEKAADKYHGV KFDPATGKQ K SA+TQSYTTYFAEALIAEAEVD+D
Sbjct: 356 HVVTEKGRGYPYAEKAADKYHGVVKFDPATGKQLKPSAKTQSYTTYFAEALIAEAEVDQD 415

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTGLN FL RFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR
Sbjct: 416 IVAIHAAMGGGTGLNHFLHRFPARCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 475

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELF
Sbjct: 476 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELF 535

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAI+DRPSCFRYPRGNG+GV+LPPGNKG PLE+GKGRILIEGER ALLGYGTAV
Sbjct: 536 HMVATAAAINDRPSCFRYPRGNGLGVQLPPGNKGTPLEIGKGRILIEGERAALLGYGTAV 595

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           QSC+AA++ +ES+GLR TVADARFCKPLDH LIR LAKSHEVLITVEEGS GGFGSHV Q
Sbjct: 596 QSCIAAASSVESHGLRPTVADARFCKPLDHGLIRKLAKSHEVLITVEEGSTGGFGSHVAQ 655

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           FLA DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ+GLTP+HIAAT+FNILG TREALE+
Sbjct: 656 FLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQSGLTPAHIAATLFNILGHTREALEV 715

Query: 719 MS 720
           MS
Sbjct: 716 MS 717


>gi|124558735|gb|ABN13970.1| 1-deoxy-D-xylulose 5-phosphate synthase [Gossypium barbadense]
          Length = 720

 Score = 1294 bits (3348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/724 (87%), Positives = 674/724 (93%), Gaps = 5/724 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAA-LFSHFSHKLDNHQIQLKKRPNGVCA 59
           MAL A SFP  ++    S P KS+P  SHF G + L      KL+    Q+KKRP G  A
Sbjct: 1   MALCASSFPAIINWGAASDPQKSTPFASHFLGGSDLVLQPLKKLN----QVKKRPGGAYA 56

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSE  EYHSQRP TPLLDTINY IHMKNLS++ELKQL++ELR+DV+FNVSKTGGHLGSS
Sbjct: 57  SLSEGAEYHSQRPATPLLDTINYLIHMKNLSVKELKQLSEELRSDVVFNVSKTGGHLGSS 116

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFNAP+D+ILWDVGHQ+YPHKILTGRR KMHTMRQT+GL+GFTKRSES
Sbjct: 117 LGVVELTVALHYVFNAPRDKILWDVGHQSYPHKILTGRRHKMHTMRQTNGLAGFTKRSES 176

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYDCFGTGHSST+ISAGLGMAVGRDLKG +N+VVAVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 177 EYDCFGTGHSSTTISAGLGMAVGRDLKGERNHVVAVIGDGAMTAGQAYEAMNNAGYLDSD 236

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH
Sbjct: 237 MIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 296

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV+IL+EVK TKTTGPVLIH
Sbjct: 297 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVSILKEVKTTKTTGPVLIH 356

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK ++ TQSYTTYFAEALIAEAE DK++
Sbjct: 357 VVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGNSATQSYTTYFAEALIAEAEADKNI 416

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTGLNLFLRRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA
Sbjct: 417 VAIHAAMGGGTGLNLFLRRFPQRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 476

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELFH
Sbjct: 477 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFH 536

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNGIGV+LPPG KG+PLEVGKGR+LIEGERVALLGYG+AVQ
Sbjct: 537 MVATAAAIDDRPSCFRYPRGNGIGVQLPPGKKGVPLEVGKGRVLIEGERVALLGYGSAVQ 596

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           SCLAA++LLES+GLRLTVADARFCKPLDHALIR LAKSHEVLITVEEGSIGGFGSHV QF
Sbjct: 597 SCLAAASLLESHGLRLTVADARFCKPLDHALIRKLAKSHEVLITVEEGSIGGFGSHVAQF 656

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           LA DGLLDG VKWRPLVLPDRYIDHGSP DQLA+AGLTPSHIAATVFN+L Q REALE+M
Sbjct: 657 LALDGLLDGKVKWRPLVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNVLEQKREALEVM 716

Query: 720 SFKS 723
           S ++
Sbjct: 717 SSRN 720


>gi|356546474|ref|XP_003541651.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 721

 Score = 1290 bits (3339), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/725 (87%), Positives = 683/725 (94%), Gaps = 9/725 (1%)

Query: 1   MALSAFSFPTYVSKATN-SGPHKSS---PVTSH-FFGAALFSHFSHKLDNHQIQLKKRPN 55
           M+LSAFSFP ++ + T  S P  SS   P++SH  +GA L +    KL+    Q+K+RP+
Sbjct: 1   MSLSAFSFPLHLRQTTPPSDPKTSSTPLPLSSHSHWGADLLTQSQRKLN----QVKRRPH 56

Query: 56  GVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGH 115
           GVCASLSE GEY+SQ+PPTPLLDTINYPIHMKNL+ ++LKQLADELR+DVIF+VS+TGGH
Sbjct: 57  GVCASLSEMGEYYSQKPPTPLLDTINYPIHMKNLATKKLKQLADELRSDVIFHVSRTGGH 116

Query: 116 LGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTK 175
           LGSSLGV+ELT+ALHYVFNAPKD+ILWDVGHQ+YPHKILTGRRDKMHTMRQTDGL+GFTK
Sbjct: 117 LGSSLGVVELTIALHYVFNAPKDKILWDVGHQSYPHKILTGRRDKMHTMRQTDGLAGFTK 176

Query: 176 RSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 235
           RSES+YDCFGTGHSST+ISAGLGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGY
Sbjct: 177 RSESDYDCFGTGHSSTTISAGLGMAVGRDLKGDKNNVVAVIGDGAMTAGQAYEAMNNAGY 236

Query: 236 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG 295
           LDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALS+LQSNRPLRELREVAKGVTKQIG
Sbjct: 237 LDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSKLQSNRPLRELREVAKGVTKQIG 296

Query: 296 GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGP 355
           GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV+IL EVK+TKTTGP
Sbjct: 297 GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVSILNEVKSTKTTGP 356

Query: 356 VLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEV 415
           VL+HVVTEKG GYPYAE+AADKYHGV KFDPATGKQFKS+A TQSYTTYFAEALIAEAE 
Sbjct: 357 VLLHVVTEKGHGYPYAERAADKYHGVTKFDPATGKQFKSNAATQSYTTYFAEALIAEAEA 416

Query: 416 DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 475
           DKD+V IHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF
Sbjct: 417 DKDIVGIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 476

Query: 476 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA 535
           MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEA
Sbjct: 477 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEA 536

Query: 536 ELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYG 595
           ELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLE+GKGRILIEGERVALLGYG
Sbjct: 537 ELFHMVATAAAIDDRPSCFRYPRGNGIGVELPLGNKGIPLEIGKGRILIEGERVALLGYG 596

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           +AVQSCLAA++LLE +GLR TVADARFCKPLD +LIRSLA+SHEVLITVEEGSIGGFGSH
Sbjct: 597 SAVQSCLAAASLLEHHGLRATVADARFCKPLDRSLIRSLAQSHEVLITVEEGSIGGFGSH 656

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           VVQF+A DGLLDG +KWRP+VLPD YIDHGSP DQL+ AGLTPSHIAATVFN+LGQTREA
Sbjct: 657 VVQFMALDGLLDGKLKWRPIVLPDCYIDHGSPVDQLSAAGLTPSHIAATVFNLLGQTREA 716

Query: 716 LEIMS 720
           LE+M+
Sbjct: 717 LEVMT 721


>gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var.
           lobata]
          Length = 717

 Score = 1290 bits (3338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/724 (87%), Positives = 677/724 (93%), Gaps = 11/724 (1%)

Query: 1   MALSAFS-FPTYVSKATNSGPHKSSPVTSHFFGAALF---SHFSHKLDNHQIQLKKRPNG 56
           M L A S +P +V   T S P +S P+ SH      F   S  +H+L+    Q+KKR +G
Sbjct: 1   MDLCALSSYPAFV---TPSDPRRSLPLPSHSQWGLDFLAQSQHTHRLN----QMKKRSSG 53

Query: 57  VCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHL 116
           VC SLSERGEY+SQRPPTPLLDTINYPIHMKNLS +ELKQLADELR+DVIF+VS+TGGHL
Sbjct: 54  VCTSLSERGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGHL 113

Query: 117 GSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           GSSLGV+ELTVALHYVFN P+D+ILWDVGHQ+YPHKILTGRRDKMHTMRQT+GLSGFTKR
Sbjct: 114 GSSLGVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKR 173

Query: 177 SESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL 236
           SESEYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEA+NNAGYL
Sbjct: 174 SESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEALNNAGYL 233

Query: 237 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 296
           DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK+IGG
Sbjct: 234 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRIGG 293

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
           PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLVAIL EVK+TKTTGPV
Sbjct: 294 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVAILNEVKSTKTTGPV 353

Query: 357 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           LIHV+TEKGRGYPYAEKAADKYHGV KFDP TGKQFKS A TQSYTTYFAEALIAEAE D
Sbjct: 354 LIHVITEKGRGYPYAEKAADKYHGVTKFDPPTGKQFKSKATTQSYTTYFAEALIAEAEAD 413

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
           KD+VAIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM
Sbjct: 414 KDIVAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 473

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE
Sbjct: 474 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 533

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           LFHMVATAAAI+DRPSCFRYPRGNGIGV+LP GNKG PLE+GKGRILIEGERVALLGYG+
Sbjct: 534 LFHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKGRILIEGERVALLGYGS 593

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
           AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGFGSHV
Sbjct: 594 AVQNCLAAASLVERHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHV 653

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL+ AGLTPSHIAATVFNILGQTREAL
Sbjct: 654 AQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSHIAATVFNILGQTREAL 713

Query: 717 EIMS 720
           E+MS
Sbjct: 714 EVMS 717


>gi|30315812|sp|O78328.1|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; AltName:
           Full=CapTKT2; Flags: Precursor
 gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum annuum]
          Length = 719

 Score = 1288 bits (3332), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/723 (86%), Positives = 681/723 (94%), Gaps = 7/723 (0%)

Query: 1   MALSAFSFPTYVSK--ATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGV 57
           MAL A++FP  +++  A  S   K +P+ S +  G  L   F  KL     Q+KKR   V
Sbjct: 1   MALCAYAFPGILNRTVAVASDASKPTPLFSEWIHGTDLQFQFHQKL----TQVKKRSRTV 56

Query: 58  CASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLG 117
            ASLSE GEY++QRPPTP++DTINYPIHMKNLS++ELKQLADELR+D IFNVSKTGGHLG
Sbjct: 57  QASLSESGEYYTQRPPTPIVDTINYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLG 116

Query: 118 SSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRS 177
           SSLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRR+KM T+RQT+GL+GFTKRS
Sbjct: 117 SSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRS 176

Query: 178 ESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 237
           ESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGAMTAGQAYEAMNNAGYLD
Sbjct: 177 ESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLD 236

Query: 238 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           SDMIVILNDN+QVSLPTATLDGP+PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP
Sbjct: 237 SDMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 296

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL++IL+EV++TKTTGPVL
Sbjct: 297 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVL 356

Query: 358 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 417
           IHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK SA+TQSYTTYFAEALIAEAE DK
Sbjct: 357 IHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAKTQSYTTYFAEALIAEAEADK 416

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
           D+VAIHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ
Sbjct: 417 DIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 476

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAEL
Sbjct: 477 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAEL 536

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           FH+VATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKGRIL+EGERVALLGYG+A
Sbjct: 537 FHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSA 596

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           VQ+CLAA+++LES GL++TVADARFCKPLD ALIRSLAKSHEVL+TVE+GSIGGFGSHVV
Sbjct: 597 VQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVV 656

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQTREALE
Sbjct: 657 QFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALE 716

Query: 718 IMS 720
           +M+
Sbjct: 717 VMT 719


>gi|386081792|gb|AFI98878.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
           somnifera]
 gi|386082787|gb|AFI98880.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
           somnifera]
          Length = 717

 Score = 1286 bits (3329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/721 (86%), Positives = 676/721 (93%), Gaps = 5/721 (0%)

Query: 1   MALSAFSFPTY-VSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MAL A++FP + +  A +  P +SS  +  F G  L   F HK      Q+KKR   V A
Sbjct: 1   MALCAYAFPGFLIRTAVSDSPKQSSLFSEWFHGTDLQFQFQHKF----TQVKKRSRVVQA 56

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSE GEY++QRPPTP+LDTINYPIHMKNLS++ELKQLA+ELR+D IFNVSKTGGHLGSS
Sbjct: 57  SLSETGEYYTQRPPTPILDTINYPIHMKNLSLKELKQLAEELRSDTIFNVSKTGGHLGSS 116

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRR+KM T+RQT+GL+GFTKRSES
Sbjct: 117 LGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSES 176

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 177 EYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSD 236

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPTATLDGP+PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH
Sbjct: 237 MIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 296

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL++IL+EVK+TKTTGPVLIH
Sbjct: 297 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVKSTKTTGPVLIH 356

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK  A+TQSYTTYFAEALIAEAE +KD+
Sbjct: 357 VVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGIAKTQSYTTYFAEALIAEAEANKDI 416

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTG+NLFL RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA
Sbjct: 417 VAIHAAMGGGTGMNLFLGRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 476

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELFH
Sbjct: 477 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFH 536

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNGIGVELP GN+G PLEVGKGRIL+EGERVALLGYG+AVQ
Sbjct: 537 MVATAAAIDDRPSCFRYPRGNGIGVELPAGNRGTPLEVGKGRILVEGERVALLGYGSAVQ 596

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           +CLAASA+LES+ L++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHV QF
Sbjct: 597 NCLAASAVLESHCLQVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVAQF 656

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQTREALE+M
Sbjct: 657 MALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVM 716

Query: 720 S 720
           +
Sbjct: 717 T 717


>gi|350539507|ref|NP_001234672.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
 gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
          Length = 719

 Score = 1286 bits (3328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/722 (86%), Positives = 680/722 (94%), Gaps = 5/722 (0%)

Query: 1   MALSAFSFPTYVSK-ATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGVC 58
           MAL A++FP  +++    S   K++P+ S +  G  L   F HKL +   ++KKR   V 
Sbjct: 1   MALCAYAFPGILNRTGVVSDSSKATPLFSGWIHGTDLQFLFQHKLTH---EVKKRSRVVQ 57

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ASLSE GEY++QRPPTP+LDT+NYPIHMKNLS++ELKQLADELR+D IFNVSKTGGHLGS
Sbjct: 58  ASLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM T+RQTDGL+GFTKRSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSE 177

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGAMTAGQAYEAMNNAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           DMIVILNDN+QVSLPTATLDGP+ PVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+AIL+EV++TKTTGPVLI
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLI 357

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK+SA+TQSYTTYFAEALIAEAE DKD
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKASAKTQSYTTYFAEALIAEAEADKD 417

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGLACEG+KPFCAIYSSFMQR
Sbjct: 418 IVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQR 477

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAELF
Sbjct: 478 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELF 537

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKGRILIEGERVALLGYG+AV
Sbjct: 538 HMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGYGSAV 597

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+CL A+ +LES GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ
Sbjct: 598 QNCLDAAIVLESRGLQVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 657

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           F+A DGLLDG +KWRP+VLPDRYIDHGSP DQLA+AGLTPSHIAATVFNILGQTREALE+
Sbjct: 658 FMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNILGQTREALEV 717

Query: 719 MS 720
           M+
Sbjct: 718 MT 719


>gi|194396283|gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana tabacum]
          Length = 717

 Score = 1286 bits (3327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/721 (86%), Positives = 674/721 (93%), Gaps = 5/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MAL A++ P  +++   S   K SP+ S  F G  L   F HKL     Q+KKR  GV A
Sbjct: 1   MALCAYAVPGILNRTVASDYSKQSPLFSELFHGTDLQYQFQHKL----TQVKKRSRGVQA 56

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSERGEY++QRPPTPLLDTINYPIHMKNLS++ELKQLA+ELR+D IFNVSKTGGHLGSS
Sbjct: 57  SLSERGEYYAQRPPTPLLDTINYPIHMKNLSVKELKQLAEELRSDTIFNVSKTGGHLGSS 116

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFN P+DRILWDVGHQ+YPHKILTGRR KM T+RQTDGL+GFTKRSES
Sbjct: 117 LGVVELTVALHYVFNTPQDRILWDVGHQSYPHKILTGRRGKMSTLRQTDGLAGFTKRSES 176

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
            YDCFGTGHSST+ISAGLGMAVGRDLKG+ NNV+AVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 177 VYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSD 236

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPTATLDGP PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH
Sbjct: 237 MIVILNDNRQVSLPTATLDGPAPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 296

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL++IL+EV++TKTTGPVLIH
Sbjct: 297 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLIH 356

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           V+TEKGRGYPYAE+AADKYHGVAKFDPATGKQFK SA+TQSYTTYFAEALIAEAE DKD+
Sbjct: 357 VITEKGRGYPYAERAADKYHGVAKFDPATGKQFKVSAKTQSYTTYFAEALIAEAEADKDI 416

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRA
Sbjct: 417 VAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRA 476

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDE ELFH
Sbjct: 477 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDETELFH 536

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNGIGVELP GNKG PLEVGKGRIL+EGERVALLGYG+AVQ
Sbjct: 537 MVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKGRILVEGERVALLGYGSAVQ 596

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           +CLAA+A+LE+ GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHV QF
Sbjct: 597 NCLAAAAVLETRGLQVTVADARFCKPLDGALIRSLAKSHEVLITVEEGSIGGFGSHVAQF 656

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQTREALE+M
Sbjct: 657 MALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVM 716

Query: 720 S 720
           +
Sbjct: 717 T 717


>gi|301341852|gb|ADK73609.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum tuberosum]
          Length = 719

 Score = 1285 bits (3325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/722 (86%), Positives = 680/722 (94%), Gaps = 5/722 (0%)

Query: 1   MALSAFSFPTYVSK-ATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGVC 58
           MAL A++FP  +++ A  S   K++P+ S +  G  L   F HKL +   ++KKR   V 
Sbjct: 1   MALCAYAFPGILNRTAVVSDSSKTAPLFSEWIHGTDLQFLFQHKLTH---EVKKRSRVVQ 57

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ASLSE GEY++QRPPTP+LDT+NYPIHMKNLS++ELKQLADELR+D IFNVSKTGGHLGS
Sbjct: 58  ASLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM T+RQTDGL+GFTKRSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSE 177

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGAMTAGQAYEAMNNAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           DMIVILNDN+QVSLPTATLDGP+ PVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+AIL+EV++TKTTGPVLI
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLI 357

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK++A+TQSYTTYFAEALIAEAE DKD
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKANAKTQSYTTYFAEALIAEAEADKD 417

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQ AVTFAAGLACEG+KPFCAIYSSFMQR
Sbjct: 418 IVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQRAVTFAAGLACEGIKPFCAIYSSFMQR 477

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAELF
Sbjct: 478 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELF 537

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKGRILIEGERVALLGYG+AV
Sbjct: 538 HMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGYGSAV 597

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+CL A+ +LES G+++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ
Sbjct: 598 QNCLDAAIVLESRGIQVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 657

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           F+A DGLLDG +KWRP+VLPDRYIDHGSP DQLA+AGLTPSHIAATVFNILGQTREALE+
Sbjct: 658 FMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNILGQTREALEV 717

Query: 719 MS 720
           M+
Sbjct: 718 MT 719


>gi|256619604|emb|CAZ66648.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 precursor [Solanum
           lycopersicum]
          Length = 719

 Score = 1283 bits (3320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/722 (86%), Positives = 679/722 (94%), Gaps = 5/722 (0%)

Query: 1   MALSAFSFPTYVSK-ATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGVC 58
           MAL A++FP  +++    S   K++P+ S +  G  L   F HK   H++  KKR   V 
Sbjct: 1   MALCAYAFPGILNRTGVVSDSSKATPLFSGWIHGTDLQFLFQHK-PTHEV--KKRSRVVQ 57

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ASLSE GEY++QRPPTP+LDT+NYPIHMKNLS++ELKQLADELR+D IFNVSKTGGHLGS
Sbjct: 58  ASLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM T+RQTDGL+GFTKRSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSE 177

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGAMTAGQAYEAMNNAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           DMIVILNDN+QVSLPTATLDGP+ PVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+AIL+EV++TKTTGPVLI
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVRSTKTTGPVLI 357

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK+SA+TQSYTTYFAEALIAEAE DKD
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKASAKTQSYTTYFAEALIAEAEADKD 417

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGLACEG+KPFCAIYSSFMQR
Sbjct: 418 IVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQR 477

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAELF
Sbjct: 478 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELF 537

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKGRILIEGERVALLGYG+AV
Sbjct: 538 HMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILIEGERVALLGYGSAV 597

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+CL A+ +LES GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ
Sbjct: 598 QNCLDAAIVLESRGLQVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 657

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           F+A DGLLDG +KWRP+VLPDRYIDHGSP DQLA+AGLTPSHIAATVFNILGQTREALE+
Sbjct: 658 FMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSHIAATVFNILGQTREALEV 717

Query: 719 MS 720
           M+
Sbjct: 718 MT 719


>gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis
           guineensis]
          Length = 707

 Score = 1279 bits (3309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/720 (85%), Positives = 665/720 (92%), Gaps = 13/720 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS FSFP+ +           S +  H+ G A     SH+     ++ +KRP  VCAS
Sbjct: 1   MALSTFSFPSQMP----------SLLCPHWLGGADL--HSHQHQYRLLKTRKRPC-VCAS 47

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           LSE GEYHSQRPPTPLLDTINYPIHMKNLSI+ELKQL DELR+D+IF+VSKTGGHLGSSL
Sbjct: 48  LSEHGEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLGDELRSDIIFHVSKTGGHLGSSL 107

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALH+VFNAP+D+ILWDVGHQ+YPHKILTGRRDKM T+RQT+GLSGFTKRSESE
Sbjct: 108 GVVELTVALHHVFNAPQDKILWDVGHQSYPHKILTGRRDKMPTLRQTNGLSGFTKRSESE 167

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YD FG GHSSTSISA LGMAVGRDLKGRKNNV+AVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 168 YDSFGAGHSSTSISAALGMAVGRDLKGRKNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDM 227

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQS+RPLRELREVAKGVTKQIGG MH+
Sbjct: 228 IVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSSRPLRELREVAKGVTKQIGGSMHK 287

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV IL+EVK+TKTTGPV IHV
Sbjct: 288 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVTILKEVKSTKTTGPVFIHV 347

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+AADKYHGVAKFDP+TGKQFKS ++TQSYT YFAEALI+EAEVDKD+V
Sbjct: 348 VTEKGRGYPYAERAADKYHGVAKFDPSTGKQFKSRSKTQSYTNYFAEALISEAEVDKDIV 407

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLN FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRAY
Sbjct: 408 AIHAAMGGGTGLNYFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAY 467

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT+MACLPNMVVM PSDEAELFHM
Sbjct: 468 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTYMACLPNMVVMTPSDEAELFHM 527

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRYPRGNG+GV LP GNKG+PLEVGKGRILIEGERVALLGYG AVQ 
Sbjct: 528 VATAAAIDDRPSCFRYPRGNGVGVPLPAGNKGVPLEVGKGRILIEGERVALLGYGAAVQG 587

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CLAA++LLE + L++TVADARFCKPLDHALIRSLA+SHE+LITVEEGSIGGFGSHV QF+
Sbjct: 588 CLAAASLLEEHSLKVTVADARFCKPLDHALIRSLARSHELLITVEEGSIGGFGSHVAQFM 647

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH+AATVFN+LGQ REALEIMS
Sbjct: 648 ALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHVAATVFNMLGQAREALEIMS 707


>gi|255068751|emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotiana tabacum]
          Length = 717

 Score = 1275 bits (3300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/721 (85%), Positives = 671/721 (93%), Gaps = 5/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MAL  ++ P  +++   S   K SP+ S  F G  L   F HKL     ++KKR  GV A
Sbjct: 1   MALCNYAVPGILNRTVASDYSKQSPLFSELFHGTDLQYQFQHKL----TRVKKRSRGVQA 56

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSE+GEY++QRPPTPLLDTINYPIHMKNLS++ELKQLA+ELR+D IFNVSKTGGHLGSS
Sbjct: 57  SLSEKGEYYAQRPPTPLLDTINYPIHMKNLSVKELKQLAEELRSDTIFNVSKTGGHLGSS 116

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFN P+DRILWDVGHQ+YPHKILTGRR KM T+RQTDGL+GFTKRSES
Sbjct: 117 LGVVELTVALHYVFNTPQDRILWDVGHQSYPHKILTGRRGKMSTLRQTDGLAGFTKRSES 176

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYDCFGTGHSST+ISAGLGMAVGRDLKG+ NNV+AVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 177 EYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSD 236

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPTATLDGP PPVGALS ALSRLQSNRPLRELREVAKGVTKQIGGPMH
Sbjct: 237 MIVILNDNRQVSLPTATLDGPAPPVGALSRALSRLQSNRPLRELREVAKGVTKQIGGPMH 296

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL++IL+EV++TKTTGPVLIH
Sbjct: 297 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLIH 356

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           V+TEKGRGYPYAE+AADKYHGVAKFDPATGKQFK SA+TQSYTTYFAEALIAEAE DKD+
Sbjct: 357 VITEKGRGYPYAERAADKYHGVAKFDPATGKQFKVSAKTQSYTTYFAEALIAEAEADKDI 416

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTG+N+F RRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRA
Sbjct: 417 VAIHAAMGGGTGMNIFHRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRA 476

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDE ELFH
Sbjct: 477 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDETELFH 536

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNGIGVELP GNKG PLEVGKGRIL+EGERVALLGYG+AVQ
Sbjct: 537 MVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKGRILVEGERVALLGYGSAVQ 596

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           +CLAA+A+L + GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHV QF
Sbjct: 597 NCLAAAAVLVTRGLQVTVADARFCKPLDGALIRSLAKSHEVLITVEEGSIGGFGSHVAQF 656

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQTREALE+M
Sbjct: 657 MALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVM 716

Query: 720 S 720
           +
Sbjct: 717 T 717


>gi|193792541|gb|ACF21004.1| 1-deoxy-D-xylulose 5-phosphate synthase [Salvia miltiorrhiza]
          Length = 714

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/672 (90%), Positives = 642/672 (95%)

Query: 49  QLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFN 108
           Q++K   G+CA+LSERGEY SQ+PPTPLLDTINYPIHMKNLS +EL+QLADELR+DVIFN
Sbjct: 43  QIRKSSTGICATLSERGEYFSQKPPTPLLDTINYPIHMKNLSTKELQQLADELRSDVIFN 102

Query: 109 VSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTD 168
           VSKTGGHLGSSLGVIELTVALHYVFNAP+DRILWDVGHQ YPHKILTGRRD+M ++RQT 
Sbjct: 103 VSKTGGHLGSSLGVIELTVALHYVFNAPQDRILWDVGHQAYPHKILTGRRDRMPSLRQTG 162

Query: 169 GLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYE 228
           GLSGFTKRSES+YDCFG GHSST+ISAGLGMAVGRDLKGRK+NVVAVIGDGAMTAGQAYE
Sbjct: 163 GLSGFTKRSESDYDCFGAGHSSTTISAGLGMAVGRDLKGRKDNVVAVIGDGAMTAGQAYE 222

Query: 229 AMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK 288
           AMNNAGYLDSDMIVILNDNKQVSLPTA LDGP  PVGALSSALSRLQSNRPLRELREVAK
Sbjct: 223 AMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTAPVGALSSALSRLQSNRPLRELREVAK 282

Query: 289 GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVK 348
           GVTKQIGGPMHELAAKVDEYARG+ISGSGSTLFEELGLYYIGPVDGHN+DDL AI  EVK
Sbjct: 283 GVTKQIGGPMHELAAKVDEYARGLISGSGSTLFEELGLYYIGPVDGHNLDDLTAIHREVK 342

Query: 349 NTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEA 408
           +TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSSA TQ YTTYFAEA
Sbjct: 343 STKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAPTQPYTTYFAEA 402

Query: 409 LIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 468
           LIAEAEVDKD+VAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEG+KPF
Sbjct: 403 LIAEAEVDKDIVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPF 462

Query: 469 CAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVV 528
           CAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVV
Sbjct: 463 CAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVV 522

Query: 529 MAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER 588
           MAPSDEAELF+MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG PLE+GKGRILIEGER
Sbjct: 523 MAPSDEAELFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGKPLEIGKGRILIEGER 582

Query: 589 VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS 648
           VALLGYG+AVQSCLAA+AL+E+ GL+LTVADARFC PLDHALIRSLAKSHEVLITVEEGS
Sbjct: 583 VALLGYGSAVQSCLAAAALVETRGLQLTVADARFCMPLDHALIRSLAKSHEVLITVEEGS 642

Query: 649 IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNI 708
           IGGFGSHV  F+A DGLLDG +KWRPLVLPDRYIDHG+P DQL +AGLTPSHIAATVFNI
Sbjct: 643 IGGFGSHVAHFMALDGLLDGNLKWRPLVLPDRYIDHGAPVDQLMEAGLTPSHIAATVFNI 702

Query: 709 LGQTREALEIMS 720
           LG+ REALEIMS
Sbjct: 703 LGKAREALEIMS 714


>gi|351725475|ref|NP_001236070.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
 gi|226536911|gb|ACO72582.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
          Length = 708

 Score = 1270 bits (3286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/696 (88%), Positives = 660/696 (94%), Gaps = 4/696 (0%)

Query: 25  PVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPI 84
           P+ SH      F   +H+L     Q+KKRP GV ASLSE GEY+S RPPTPLLDT+NYPI
Sbjct: 17  PLPSHSQWGLHFLAHAHRLH----QMKKRPCGVYASLSESGEYYSHRPPTPLLDTVNYPI 72

Query: 85  HMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDV 144
           HMKNLS +ELKQLADELR+DVIF+VS+TGGHLGSSLGV+ELTVALHYVFNAP+D+ILWDV
Sbjct: 73  HMKNLSAKELKQLADELRSDVIFSVSRTGGHLGSSLGVVELTVALHYVFNAPQDKILWDV 132

Query: 145 GHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRD 204
           GHQ+YPHKILTGRRD+MHTMRQT+GLSGFTKRSESE+DCFGTGHSST+ISAGLGMAVGRD
Sbjct: 133 GHQSYPHKILTGRRDQMHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRD 192

Query: 205 LKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPV 264
           LKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPV
Sbjct: 193 LKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPV 252

Query: 265 GALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEEL 324
           GALSSALSRLQSNRPLRELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGS+LFEEL
Sbjct: 253 GALSSALSRLQSNRPLRELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSSLFEEL 312

Query: 325 GLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKF 384
           GLYYIGPVDGHN+DDLVAIL EVK+TKTTGPVLIHV+TEKGRGYPYAEKAADKYHGV KF
Sbjct: 313 GLYYIGPVDGHNIDDLVAILNEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKF 372

Query: 385 DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCF 444
           DP TGKQFKS A TQSYTTYFAEALIAEAE DKDVVAIHAAMGGGTG+NLF RRFPTRCF
Sbjct: 373 DPPTGKQFKSKATTQSYTTYFAEALIAEAEADKDVVAIHAAMGGGTGMNLFHRRFPTRCF 432

Query: 445 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLV 504
           DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLV
Sbjct: 433 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLV 492

Query: 505 GADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV 564
           GADGPTHCGSFDVTFMACLPNMVVMAPSDEA+LFHMVATAAAI+DRPSCFRYPRGNGIGV
Sbjct: 493 GADGPTHCGSFDVTFMACLPNMVVMAPSDEADLFHMVATAAAINDRPSCFRYPRGNGIGV 552

Query: 565 ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 624
           +LP GNKG PLE+GKGRILIEGERVALLGYG+AVQ+CLAA++L+E +GLRLTVADARFCK
Sbjct: 553 QLPTGNKGTPLEIGKGRILIEGERVALLGYGSAVQNCLAAASLVECHGLRLTVADARFCK 612

Query: 625 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 684
           PLD +LIRSLAKSHEVLITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDH
Sbjct: 613 PLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDH 672

Query: 685 GSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           GSPADQL+ AGLTPSHIAATVFN+L QTREALE+MS
Sbjct: 673 GSPADQLSLAGLTPSHIAATVFNVLRQTREALEVMS 708


>gi|356563764|ref|XP_003550129.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 712

 Score = 1269 bits (3283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/723 (86%), Positives = 672/723 (92%), Gaps = 14/723 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTS-HFFGAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           M LS+ S    V   T S P KS P    HF        ++H+L+    Q+KKR +GV A
Sbjct: 1   MDLSSLSSYRTVG-VTPSDPRKSLPQWGLHFLS------YTHRLN----QIKKRSSGVYA 49

Query: 60  SLSER--GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLG 117
           SLSER  GEY+SQRPPTPLLDT+NYPIHMKNLS  ELKQLADELR+DVIF+VS+TGGHLG
Sbjct: 50  SLSERERGEYYSQRPPTPLLDTVNYPIHMKNLSTNELKQLADELRSDVIFSVSRTGGHLG 109

Query: 118 SSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRS 177
           SSLGV+ELTVALHYVFNAP+D+ILWDVGHQ+YPHKILTGRRDKMHTMRQT+GLSGFTKRS
Sbjct: 110 SSLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRS 169

Query: 178 ESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 237
           ESE+DCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD
Sbjct: 170 ESEFDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 229

Query: 238 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK+IGGP
Sbjct: 230 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKRIGGP 289

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           MHELAAKVDEYARGMISGSGS+LFEELGLYYIGPVDGHN++DLVAIL EVK+T TTGPVL
Sbjct: 290 MHELAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNINDLVAILNEVKSTNTTGPVL 349

Query: 358 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 417
           IHV+TEKGRGYPYAEKAADKYHGV KFDP TGKQFKS A T+SYTTYFAEALIAEAE DK
Sbjct: 350 IHVITEKGRGYPYAEKAADKYHGVTKFDPPTGKQFKSKATTRSYTTYFAEALIAEAEADK 409

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
           DVVAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ
Sbjct: 410 DVVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 469

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL
Sbjct: 470 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 529

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           FHMVATAAAI+DRPSCFRYPRGNGIGV+LP GNKG PLE+GKGRILIEGERVALLGYG+A
Sbjct: 530 FHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKGRILIEGERVALLGYGSA 589

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           VQ+CLAA++L+E +GLR+TVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGFGSHV 
Sbjct: 590 VQNCLAAASLVEHHGLRVTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSHVA 649

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           QF+A DGL+DG +KWRP+VLPDRYIDHGSPADQL+ AGLTPSHIAATVFNILGQTREALE
Sbjct: 650 QFMALDGLIDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSHIAATVFNILGQTREALE 709

Query: 718 IMS 720
           +MS
Sbjct: 710 VMS 712


>gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia annua]
          Length = 713

 Score = 1269 bits (3283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/721 (85%), Positives = 673/721 (93%), Gaps = 9/721 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSH-FFGAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MALSAF+FPT ++  + +    + P+  H  FG  L S  S K  N   Q+ KR NG+ +
Sbjct: 1   MALSAFAFPTQINHRSVT---SNQPLIQHCLFGTDLNS--SQKPFN---QIVKRSNGIRS 52

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           +LSERGEYHSQRPPTPLLDTINYPIHMKNLS++ELKQLADELR+DVIFNVSKTGGHLGSS
Sbjct: 53  TLSERGEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVIFNVSKTGGHLGSS 112

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFN P+D+ILWDVGHQ+YPHKILTGRRD+MHT+RQT+GL+GFTKRSES
Sbjct: 113 LGVVELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDQMHTIRQTNGLAGFTKRSES 172

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           E+DCFGTGHSST+ISAGLGMAVGRDLKG  N+VVA+IGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 173 EHDCFGTGHSSTTISAGLGMAVGRDLKGGTNDVVAIIGDGAMTAGQAYEAMNNAGYLDSD 232

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAK VTKQIGGPMH
Sbjct: 233 MIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKEVTKQIGGPMH 292

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH++DDLVAIL+EVK+TKTTGPVLIH
Sbjct: 293 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDLVAILKEVKSTKTTGPVLIH 352

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           V+TEKGRGYPYAEKAADKYHGV KFDPATGKQFKSSA TQSYTTYFAEALIAEAE DK +
Sbjct: 353 VITEKGRGYPYAEKAADKYHGVGKFDPATGKQFKSSAPTQSYTTYFAEALIAEAEADKKI 412

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           V IHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR 
Sbjct: 413 VGIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRG 472

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH GSFDVTFMACLPNMVVMAPSDEAELF+
Sbjct: 473 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSGSFDVTFMACLPNMVVMAPSDEAELFN 532

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNGIGV LPPGNKG+PLEVGKGRI++EG+RVALLGYGTAVQ
Sbjct: 533 MVATAAAIDDRPSCFRYPRGNGIGVPLPPGNKGVPLEVGKGRIMLEGQRVALLGYGTAVQ 592

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           SC+AA+ +++  GL +TVADARFCKPLDH+LIR+LAK+HEVLITVEEGSIGGFGSHV  F
Sbjct: 593 SCMAAATIVQERGLNITVADARFCKPLDHSLIRALAKTHEVLITVEEGSIGGFGSHVAHF 652

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           LA DGLLDG +KWRPLVLPDRYIDHG+PADQLA+AGLTPSHIAATVFN+LGQTREALE+M
Sbjct: 653 LALDGLLDGNLKWRPLVLPDRYIDHGAPADQLAEAGLTPSHIAATVFNVLGQTREALEVM 712

Query: 720 S 720
           S
Sbjct: 713 S 713


>gi|357478563|ref|XP_003609567.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355510622|gb|AES91764.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 717

 Score = 1266 bits (3276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/725 (84%), Positives = 666/725 (91%), Gaps = 13/725 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHF-----FGAALFSHFSHKLDNHQIQLKKRPN 55
           M L + + P++V   T   P ++ P+ S       +G   FSH          +LKK+  
Sbjct: 1   MDLCSLACPSFV---TPCDPRRTLPLPSSSSSHSQWGLHFFSH-----SQQHNKLKKKFG 52

Query: 56  GVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGH 115
            V ASLSE GEY+SQRPPTPLLDTINYPIHMKNLS +ELKQLADELR+DVIF+VS+TGGH
Sbjct: 53  VVHASLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGH 112

Query: 116 LGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTK 175
           LGSSLGV+ELT+ALHYVFN P+D+ILWDVGHQ+YPHKILTGRRDKMHTMRQT+GLSGFTK
Sbjct: 113 LGSSLGVVELTIALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTK 172

Query: 176 RSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 235
           RSESEYD FGTGHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGAMTAGQAYEAMNNAGY
Sbjct: 173 RSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGY 232

Query: 236 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG 295
           LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN+PLRELREVAKGVTK+IG
Sbjct: 233 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIG 292

Query: 296 GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGP 355
           GPMHELAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDLVAIL+EVK T +TGP
Sbjct: 293 GPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGP 352

Query: 356 VLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEV 415
           VLIHV+TEKGRGYPYAEKAADKYHGVAKFDP TGKQFK +A+TQSYTTYFAEALIAEA+ 
Sbjct: 353 VLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQSYTTYFAEALIAEAKA 412

Query: 416 DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 475
           DKD++AIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF
Sbjct: 413 DKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 472

Query: 476 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA 535
           +QRAYDQVVHDVDLQKLPVRFAMDRAGLVG+DGPTH GSFDVTFMACLPNMVVMAPSDEA
Sbjct: 473 LQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEA 532

Query: 536 ELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYG 595
           EL HMVATAAAIDDRPSCFRYPRGNGIGVELP   KGIPLE+GKGRILIEGERVALLGYG
Sbjct: 533 ELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYG 592

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           +AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGFGSH
Sbjct: 593 SAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSH 652

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           V QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL  AGLTPSHIAATVFNILGQTREA
Sbjct: 653 VAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREA 712

Query: 716 LEIMS 720
           LE+MS
Sbjct: 713 LEVMS 717


>gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula]
          Length = 717

 Score = 1265 bits (3273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/725 (84%), Positives = 666/725 (91%), Gaps = 13/725 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHF-----FGAALFSHFSHKLDNHQIQLKKRPN 55
           M L + + P++V   T   P ++ P+ S       +G   FSH          +LKK+  
Sbjct: 1   MDLCSLACPSFV---TPCDPRRTLPLPSSSSSHSQWGLHFFSH-----SQQHNKLKKKFG 52

Query: 56  GVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGH 115
            V ASLSE GEY+SQRPPTPLLDTINYPIHMKNLS +ELKQLADELR+DVIF+VS+TGGH
Sbjct: 53  VVHASLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGH 112

Query: 116 LGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTK 175
           LGSSLGV+ELT+ALHYVFN P+D+ILWDVGHQ+YPHKILTGRRDKMHTMRQT+GLSGFTK
Sbjct: 113 LGSSLGVVELTIALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTK 172

Query: 176 RSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 235
           RSESEYD FGTGHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGAMTAGQAYEAMNNAGY
Sbjct: 173 RSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGY 232

Query: 236 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG 295
           LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN+PLRELREVAKGVTK+IG
Sbjct: 233 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIG 292

Query: 296 GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGP 355
           GPMHELAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDLVAIL+EVK T +TGP
Sbjct: 293 GPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGP 352

Query: 356 VLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEV 415
           VLIHV+TEKGRGYPYA+KAADKYHGVAKFDP TGKQFK +A+TQSYTTYFAEALIAEA+ 
Sbjct: 353 VLIHVITEKGRGYPYAQKAADKYHGVAKFDPPTGKQFKVAAKTQSYTTYFAEALIAEAKA 412

Query: 416 DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 475
           DKD++AIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF
Sbjct: 413 DKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 472

Query: 476 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA 535
           +QRAYDQVVHDVDLQKLPVRFAMDRAGLVG+DGPTH GSFDVTFMACLPNMVVMAPSDEA
Sbjct: 473 LQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEA 532

Query: 536 ELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYG 595
           EL HMVATAAAIDDRPSCFRYPRGNGIGVELP   KGIPLE+GKGRILIEGERVALLGYG
Sbjct: 533 ELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYG 592

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           +AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGFGSH
Sbjct: 593 SAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSH 652

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           V QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL  AGLTPSHIAATVFNILGQTREA
Sbjct: 653 VAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREA 712

Query: 716 LEIMS 720
           LE+MS
Sbjct: 713 LEVMS 717


>gi|408833344|gb|AFU93068.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 712

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/723 (86%), Positives = 668/723 (92%), Gaps = 14/723 (1%)

Query: 1   MALSAFS-FPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQ--IQLKKRPNGV 57
           MAL  +S FP + ++A  +   +             F   S   D HQ   QLKKR  GV
Sbjct: 1   MALCTYSSFPGHFNRAVVASDLQKQ-----------FGFCSKGKDVHQKHTQLKKRSIGV 49

Query: 58  CASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLG 117
            ASLSE GEYHS+RPPTPLLDTINYPIHMKNLSI+ELKQLA+E+R+DVIFNVSKTGGHLG
Sbjct: 50  WASLSETGEYHSKRPPTPLLDTINYPIHMKNLSIKELKQLAEEVRSDVIFNVSKTGGHLG 109

Query: 118 SSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRS 177
           SSLGV+ELTVALHYVFNAPKDRILWDVGHQ+YPHKILTGRRDKMHT+RQT+GL+GFTKRS
Sbjct: 110 SSLGVVELTVALHYVFNAPKDRILWDVGHQSYPHKILTGRRDKMHTIRQTNGLAGFTKRS 169

Query: 178 ESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 237
           ESEYDCFGTGHSST+ISAGLGMAVGRDLK RKNNVV+VIGDGAMTAGQAYEAMNNAGYLD
Sbjct: 170 ESEYDCFGTGHSSTTISAGLGMAVGRDLKRRKNNVVSVIGDGAMTAGQAYEAMNNAGYLD 229

Query: 238 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           SDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG P
Sbjct: 230 SDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGWP 289

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           MH+LA+KVDEYARG+ISGSGSTLFEELGLYYIGPVDGH++DDLVAIL+EVK+T+TTGPVL
Sbjct: 290 MHDLASKVDEYARGLISGSGSTLFEELGLYYIGPVDGHSIDDLVAILKEVKSTRTTGPVL 349

Query: 358 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 417
           IHVVTEKGRGYPYAEKAADKYHGV KFDPATG+QFK+S +TQS+TTYFAEALIAEAE DK
Sbjct: 350 IHVVTEKGRGYPYAEKAADKYHGVVKFDPATGQQFKASVKTQSFTTYFAEALIAEAEADK 409

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
           DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ
Sbjct: 410 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 469

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAEL
Sbjct: 470 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAEL 529

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           FHMVATAAAIDDRPSCFRYPRGNGIGV+LPPGNKG+PLEVGKGRILIEGERVALLGYGTA
Sbjct: 530 FHMVATAAAIDDRPSCFRYPRGNGIGVDLPPGNKGVPLEVGKGRILIEGERVALLGYGTA 589

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           V+SCLAA+++++  GL LTV DARFCKPLD +LIRSLAKSHE LITVEEGSIGGFGSHV 
Sbjct: 590 VRSCLAAASIVKPRGLNLTVVDARFCKPLDCSLIRSLAKSHEFLITVEEGSIGGFGSHVA 649

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            FLA DGLLDG +KWRPLVLPDRYIDHGSPADQL +AGLTPSHIAATVFNILG+TR ALE
Sbjct: 650 HFLALDGLLDGNLKWRPLVLPDRYIDHGSPADQLTEAGLTPSHIAATVFNILGKTRGALE 709

Query: 718 IMS 720
           IMS
Sbjct: 710 IMS 712


>gi|237625980|gb|ACR02668.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Amomum
           villosum]
          Length = 715

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/721 (83%), Positives = 667/721 (92%), Gaps = 7/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQ-IQLKKRPNGVCA 59
           M+LS   FP ++   T +  H+ S  +S F      +   H+ ++ + ++ KKR + VCA
Sbjct: 1   MSLSTLPFPCHLF-GTAASNHQKSNTSSPFL-----TELHHRQEHSRSLKSKKRSSCVCA 54

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSE GEYHSQRPPTPLLDTINYPIHMKNLS+RELKQL++ELR+DVIFNVSKTGGHLGSS
Sbjct: 55  SLSEIGEYHSQRPPTPLLDTINYPIHMKNLSLRELKQLSEELRSDVIFNVSKTGGHLGSS 114

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVF+AP+D+ILWDVGHQ+YPHKILTGRRDKM T+RQTDGLSGFTKRSES
Sbjct: 115 LGVVELTVALHYVFSAPRDKILWDVGHQSYPHKILTGRRDKMQTLRQTDGLSGFTKRSES 174

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           +YD FG GHSSTSISA LGMAVGRDL GRKNNV+AVIGDG+MTAGQAYEAMNNAGYLDSD
Sbjct: 175 DYDAFGAGHSSTSISAALGMAVGRDLMGRKNNVIAVIGDGSMTAGQAYEAMNNAGYLDSD 234

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQS++PLRELREVAKGVTK+IGG MH
Sbjct: 235 MIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSSKPLRELREVAKGVTKKIGGSMH 294

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           E+AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV IL+EVK+TKTTGPVLIH
Sbjct: 295 EIAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVTILKEVKSTKTTGPVLIH 354

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSS++T+SYT YFA+AL+AEAEVDKD+
Sbjct: 355 VVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSSQTKSYTNYFADALVAEAEVDKDI 414

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTGLN FLR+FP RCFDVGIAEQHAVTFAAGL CEGLKPFCAIYSSF+QRA
Sbjct: 415 VAIHAAMGGGTGLNYFLRKFPDRCFDVGIAEQHAVTFAAGLTCEGLKPFCAIYSSFLQRA 474

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQV+HDVDLQKLPVRFA+DRAGLVGADGPTH G+FDV +MACLPNMVVMAPSDEAELFH
Sbjct: 475 YDQVIHDVDLQKLPVRFALDRAGLVGADGPTHSGAFDVAYMACLPNMVVMAPSDEAELFH 534

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNG+GV L PGNKG+PLE+GKGRILIEGERVALLGYGTAVQ
Sbjct: 535 MVATAAAIDDRPSCFRYPRGNGVGVPLLPGNKGVPLEIGKGRILIEGERVALLGYGTAVQ 594

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           SCLAA++++E  GL++TVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGF SHV QF
Sbjct: 595 SCLAAASMVELQGLKITVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFSSHVAQF 654

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +A DGLLDG +KWRPLVLPDRYIDHGSP DQLA+AGLTPSHIAA+VFN++GQTREAL++M
Sbjct: 655 MALDGLLDGKLKWRPLVLPDRYIDHGSPRDQLAEAGLTPSHIAASVFNVIGQTREALKMM 714

Query: 720 S 720
           S
Sbjct: 715 S 715


>gi|155369183|dbj|BAF75640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Croton stellatopilosus]
          Length = 720

 Score = 1262 bits (3265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/726 (84%), Positives = 661/726 (91%), Gaps = 13/726 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHF------FGAALFSHFSHKLDNHQIQLKKRP 54
           MALSAFSFP + +    S   K + V+ HF       G +L       L  +Q + KKRP
Sbjct: 1   MALSAFSFPAHANWDACSDLQKYTSVSPHFPWRTDLLGQSL-------LRINQAKGKKRP 53

Query: 55  NGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGG 114
            GV ASLSE  EYHS RP TPLLDTIN+PIHMKNLSI+ELKQLA+ELR+DVIFNVSKTGG
Sbjct: 54  GGVSASLSESAEYHSNRPATPLLDTINFPIHMKNLSIKELKQLAEELRSDVIFNVSKTGG 113

Query: 115 HLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFT 174
           HLGSSLGV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRRD+M T+RQT+GLSGFT
Sbjct: 114 HLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRDRMRTIRQTNGLSGFT 173

Query: 175 KRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG 234
           KR+ESE+DCFGTGHSST+ISAGLGMAVGRDLK RKNNVVAVIGDGAMTAGQAYEAMNNAG
Sbjct: 174 KRAESEHDCFGTGHSSTTISAGLGMAVGRDLKERKNNVVAVIGDGAMTAGQAYEAMNNAG 233

Query: 235 YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI 294
           YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELRE+AKGVTKQI
Sbjct: 234 YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREIAKGVTKQI 293

Query: 295 GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG 354
           GG MHELAAKVDEYARGMIS SGS+LFEELGLYYIGPVDGHN++DLV IL+EVK+TK+TG
Sbjct: 294 GGQMHELAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHNIEDLVDILKEVKSTKSTG 353

Query: 355 PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAE 414
           PVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFKS   TQSYTTYFAEALIAEAE
Sbjct: 354 PVLIHVVTEKGRGYPYAERAADKYHGVTKFDPATGKQFKSGGSTQSYTTYFAEALIAEAE 413

Query: 415 VDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 474
           VDKD+VAIHAAMGGGTGLNLF RRFP +CFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS
Sbjct: 414 VDKDIVAIHAAMGGGTGLNLFHRRFPNKCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 473

Query: 475 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE 534
           FMQRAYDQVVHDVDLQKLPVRFAMDRAGL+GADGPTHCG+FDVTFMAC PNMVVMAPS+E
Sbjct: 474 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLIGADGPTHCGAFDVTFMACPPNMVVMAPSNE 533

Query: 535 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGY 594
           AELF+MVATAAAIDDRPSCFRYPRGNGIGV LPPGNKGIP EVGKGRILIEGERVALLGY
Sbjct: 534 AELFNMVATAAAIDDRPSCFRYPRGNGIGVPLPPGNKGIPXEVGKGRILIEGERVALLGY 593

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           G AVQ+CLAA++L+E+ GLR+TVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGFGS
Sbjct: 594 GAAVQNCLAAASLVETPGLRVTVADARFCKPLDQSLIRSLAKSHEVLITVEEGSIGGFGS 653

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           HV  F+A +GLLDG +KWRPLV PDRYI+ GSPADQL +AGLTPS IAAT+FNILG  RE
Sbjct: 654 HVAHFMALNGLLDGXLKWRPLVXPDRYIEXGSPADQLIEAGLTPSXIAATIFNILGNKRE 713

Query: 715 ALEIMS 720
           AL+IMS
Sbjct: 714 ALQIMS 719


>gi|340764673|gb|AEK69518.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase 1 [Alpinia
           officinarum]
          Length = 715

 Score = 1259 bits (3258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/721 (83%), Positives = 664/721 (92%), Gaps = 7/721 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNH-QIQLKKRPNGVCA 59
           MAL AF FP ++   T +  H+ S  +S F      +   H+ ++   ++ KKR + VCA
Sbjct: 1   MALFAFPFPCHL-YGTAASNHQKSATSSPFL-----TELHHRQEHSGSLKPKKRSSCVCA 54

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           SLSE GEYHSQRPPTPLLDTINYPIHMKNLSI+ELKQL++ELR+DVIFNVSKTGGHLGSS
Sbjct: 55  SLSEIGEYHSQRPPTPLLDTINYPIHMKNLSIKELKQLSEELRSDVIFNVSKTGGHLGSS 114

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFNAP+D+I WDVGHQ+YPHKILTGRRDKM T+RQTDGLSGFTKRSES
Sbjct: 115 LGVVELTVALHYVFNAPRDKIPWDVGHQSYPHKILTGRRDKMQTLRQTDGLSGFTKRSES 174

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           +YD FG GHSSTSISA LGMAVGRDL GRKNNV+AVIGDGAMTAGQAYEAMNNAGYLDSD
Sbjct: 175 DYDAFGAGHSSTSISAALGMAVGRDLMGRKNNVIAVIGDGAMTAGQAYEAMNNAGYLDSD 234

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDNKQVSLPTATLDGP+PPVGALSS LSRLQS++PLRELREVAKG+TK+IGG MH
Sbjct: 235 MIVILNDNKQVSLPTATLDGPVPPVGALSSTLSRLQSSKPLRELREVAKGMTKRIGGSMH 294

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           E+AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV IL+EVK+TKTTGPVLIH
Sbjct: 295 EIAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVTILKEVKSTKTTGPVLIH 354

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGYPYAE+AADKYHGV +FDPATGKQFKSS++T+SYT YFA+AL+AEAEVDKD+
Sbjct: 355 VVTEKGRGYPYAERAADKYHGVTRFDPATGKQFKSSSQTKSYTNYFADALVAEAEVDKDI 414

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VAIHAAMGGGTGLN FLR+FP RCFDVGIAEQHAVTFAAGL CEGLKPFCAIYSSF+QRA
Sbjct: 415 VAIHAAMGGGTGLNHFLRKFPDRCFDVGIAEQHAVTFAAGLTCEGLKPFCAIYSSFLQRA 474

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTH G+FDV +MACLPNMVVMAPSDEAELFH
Sbjct: 475 YDQVVHDVDLQKLPVRFALDRAGLVGADGPTHSGAFDVAYMACLPNMVVMAPSDEAELFH 534

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           MVATAAAIDDRPSCFRYPRGNG+GV L PGNKG+PLE+GKGRILIEGERVALLGYGTAVQ
Sbjct: 535 MVATAAAIDDRPSCFRYPRGNGVGVPLLPGNKGVPLEIGKGRILIEGERVALLGYGTAVQ 594

Query: 600 SCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQF 659
           SCLAA +++E  GL++TVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGF SHV QF
Sbjct: 595 SCLAAXSMVELQGLKITVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFSSHVAQF 654

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +A DGLLDG +KWRPLVLPDRYIDHGSP DQLA+AGLTPSHIAA+VFNI+GQTREAL++M
Sbjct: 655 MALDGLLDGKLKWRPLVLPDRYIDHGSPRDQLAEAGLTPSHIAASVFNIIGQTREALKMM 714

Query: 720 S 720
           S
Sbjct: 715 S 715


>gi|15234642|ref|NP_193291.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
 gi|13124705|sp|Q38854.2|DXS_ARATH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; AltName:
           Full=Protein CLOROPLASTOS ALTERADOS 1; Flags: Precursor
 gi|5281019|emb|CAB45992.1| DEF (CLA1) protein [Arabidopsis thaliana]
 gi|7268304|emb|CAB78598.1| DEF (CLA1) protein [Arabidopsis thaliana]
 gi|26983842|gb|AAN86173.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
 gi|332658225|gb|AEE83625.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
 gi|392931109|gb|AFM91070.1| 1-deoxy-D-xylulose 5-phosphate synthase [synthetic construct]
          Length = 717

 Score = 1243 bits (3217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/716 (83%), Positives = 649/716 (90%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MA SAF+FP+Y+              +     + +    S  L  +      R   VCAS
Sbjct: 1   MASSAFAFPSYIITKGGLSTDSCKSTSLSSSRSLVTDLPSPCLKPNNNSHSNRRAKVCAS 60

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           L+E+GEY+S RPPTPLLDTINYPIHMKNLS++ELKQL+DELR+DVIFNVSKTGGHLGSSL
Sbjct: 61  LAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL 120

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM TMRQT+GLSGFTKR ESE
Sbjct: 121 GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE 180

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +DCFGTGHSST+ISAGLGMAVGRDLKG+ NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 181 HDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  LRELREVAKG+TKQIGGPMH+
Sbjct: 241 IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ 300

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHV
Sbjct: 301 LAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV 360

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++ +TQSYTTYFAEAL+AEAEVDKDVV
Sbjct: 361 VTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVV 420

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
Sbjct: 421 AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+M
Sbjct: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM 540

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQS
Sbjct: 541 VATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQS 600

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 601 CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           A DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 661 ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716


>gi|297804692|ref|XP_002870230.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316066|gb|EFH46489.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score = 1241 bits (3212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/716 (83%), Positives = 649/716 (90%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MA SAF+FP+Y+              +     + +    S  L  +      R   V AS
Sbjct: 1   MASSAFAFPSYIITKGGVSTDSCKSTSLSSSRSLVTDLSSPCLRPNNNSHTNRRAKVNAS 60

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           L+E+GEY++ RPPTPLLDTINYPIHMKNLS++ELKQL+DELR+DVIFNVSKTGGHLGSSL
Sbjct: 61  LAEKGEYYANRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL 120

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM TMRQT+GLSGFTKR ESE
Sbjct: 121 GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE 180

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +DCFGTGHSST+ISAGLGMAVGRDLKG+ NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 181 HDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  LRELREVAKG+TKQIGGPMH+
Sbjct: 241 IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ 300

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHV
Sbjct: 301 LAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV 360

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDPATGKQFKS+ +TQSYTTYFAEAL+AEAEVDKDVV
Sbjct: 361 VTEKGRGYPYAERADDKYHGVVKFDPATGKQFKSTNKTQSYTTYFAEALVAEAEVDKDVV 420

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
Sbjct: 421 AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+M
Sbjct: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM 540

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQS
Sbjct: 541 VATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEIGKGRILKEGERVALLGYGSAVQS 600

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 601 CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           A DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 661 ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716


>gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa]
          Length = 716

 Score = 1240 bits (3208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/719 (83%), Positives = 654/719 (90%), Gaps = 7/719 (0%)

Query: 1   MALSAFSFPTYVSKA---TNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGV 57
           MALSAF+FP+Y++     T+S    +S  +S    A L S       +H      R   V
Sbjct: 1   MALSAFAFPSYITTKGGLTDSCCKSNSLSSSRSLSADLPSPCLRPNTSHS----NRKAKV 56

Query: 58  CASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLG 117
            ASL+E+GEY+S RPPTPLLDTINYPIHMKNLS +ELKQL+DELR+DVIFNVSKTGGHLG
Sbjct: 57  NASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSTKELKQLSDELRSDVIFNVSKTGGHLG 116

Query: 118 SSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRS 177
           SSLGV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM TMRQT+GLSGFTKR 
Sbjct: 117 SSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRG 176

Query: 178 ESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD 237
           ESE+DCFGTGHSST+ISAGL MAVGRDLKG+ NNVVAVIGDGAMTAGQAYEAMNNAGYLD
Sbjct: 177 ESEHDCFGTGHSSTTISAGLRMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLD 236

Query: 238 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           SDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  LRELREVAKGVTKQIGGP
Sbjct: 237 SDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGVTKQIGGP 296

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           MH+LAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDLVAIL+EVK+ +TTGPVL
Sbjct: 297 MHQLAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSARTTGPVL 356

Query: 358 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 417
           IHV+TEKGRGYPYAE+A DKYHGV KFDPATGKQFK++ +TQSYTTYFAEAL+AEAEVDK
Sbjct: 357 IHVITEKGRGYPYAERADDKYHGVVKFDPATGKQFKTTNKTQSYTTYFAEALVAEAEVDK 416

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
           DVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ
Sbjct: 417 DVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 476

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEAEL
Sbjct: 477 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEAEL 536

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           F++VATAAAIDDRPSCFRYPRGNGIGV LPPGNKG+P+EVGKGRIL EGERVALLGYG+A
Sbjct: 537 FNIVATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEVGKGRILKEGERVALLGYGSA 596

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           VQSCL A+ +L+  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVV
Sbjct: 597 VQSCLGAAVMLQERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVV 656

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           QFLA DGLLDG +KWRP+VLPDRYIDHGSPADQ+A+AGL PSHIAAT  N++G  REAL
Sbjct: 657 QFLALDGLLDGKLKWRPMVLPDRYIDHGSPADQMAEAGLMPSHIAATALNLIGAPREAL 715


>gi|1399261|gb|AAC49368.1| DEF [Arabidopsis thaliana]
          Length = 717

 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/716 (82%), Positives = 647/716 (90%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MA SAF+FP+Y+              +     + +    S  L  +      R   VCAS
Sbjct: 1   MASSAFAFPSYIITKGGLSTDSCKSTSLSSSRSLVTDLPSPCLKPNNNSHSNRRAKVCAS 60

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           L+E+GEY+S RPPTPLLDTINYPIHMKNLS++ELKQL+DELR+DVIFNVSKTGGHLGSSL
Sbjct: 61  LAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL 120

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM TMRQT+GLSGFTKR ESE
Sbjct: 121 GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE 180

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +DCFGTGHSST+ISAGLGMAVGRDLKG+ NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 181 HDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  LRELREVAKG+TKQIGGPMH+
Sbjct: 241 IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ 300

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVD YARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHV
Sbjct: 301 LAAKVDVYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV 360

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++  TQSYTTYFAEAL+AEAEVDKDVV
Sbjct: 361 VTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNETQSYTTYFAEALVAEAEVDKDVV 420

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
Sbjct: 421 AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+M
Sbjct: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM 540

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQS
Sbjct: 541 VATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQS 600

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 601 CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           A DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 661 ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716


>gi|224102539|ref|XP_002312717.1| predicted protein [Populus trichocarpa]
 gi|222852537|gb|EEE90084.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score = 1236 bits (3199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/741 (83%), Positives = 657/741 (88%), Gaps = 50/741 (6%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALSAFS P +V+  T                              ++ +KKRPNGVCAS
Sbjct: 1   MALSAFSLPAHVNSVTR-----------------------------EVHVKKRPNGVCAS 31

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           LSE GE+ SQRPPTPLLDT+NYPIHMKNLSI+ELKQLA+ELR+DVIFNVSKTGGHLGSSL
Sbjct: 32  LSESGEFPSQRPPTPLLDTVNYPIHMKNLSIKELKQLAEELRSDVIFNVSKTGGHLGSSL 91

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHYVFN+P+D+ILWDVGHQ YPHKILTGRRDKMHT+RQT+GL+GFTKRSESE
Sbjct: 92  GVVELTVALHYVFNSPQDKILWDVGHQAYPHKILTGRRDKMHTIRQTNGLAGFTKRSESE 151

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YDCFGTGHSST+ISAGLGMAVGRDLKGR NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 152 YDCFGTGHSSTTISAGLGMAVGRDLKGRANNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 211

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE
Sbjct: 212 IVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 271

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+AIL+EVK+TKTTGPVLIHV
Sbjct: 272 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPVLIHV 331

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+AADKYHGV KFDPATGKQ K+SA TQSYTTYFAEALIAEAE DKDVV
Sbjct: 332 VTEKGRGYPYAERAADKYHGVNKFDPATGKQSKASASTQSYTTYFAEALIAEAEADKDVV 391

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ-RA 479
           AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS F+    
Sbjct: 392 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSFFLLILL 451

Query: 480 YDQ---------VVHDVD-----------LQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 519
           YD          ++ D D             KLPVRFAMDRAGLVGADGPTHCG+FDVT+
Sbjct: 452 YDNTQQYLVGIILLPDTDSSPHVDTIINVKMKLPVRFAMDRAGLVGADGPTHCGAFDVTY 511

Query: 520 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 579
           MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GV+LPP NKGIPLEVGK
Sbjct: 512 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVQLPPENKGIPLEVGK 571

Query: 580 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 639
           GRILIEGERVALLGYGTAVQSCLAA++L+E +G+ LTVADARFCKPLD+ALIRSLAKSHE
Sbjct: 572 GRILIEGERVALLGYGTAVQSCLAAASLVERHGIHLTVADARFCKPLDNALIRSLAKSHE 631

Query: 640 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 699
           VLITVEEGSIGGFGSHV  FLA DGLLDG +KWRP+VLPDRYIDHGSPADQL +AGLTPS
Sbjct: 632 VLITVEEGSIGGFGSHVAHFLALDGLLDGKLKWRPVVLPDRYIDHGSPADQLVEAGLTPS 691

Query: 700 HIAATVFNILGQTREALEIMS 720
           HIAATVFNILGQ R +LEIMS
Sbjct: 692 HIAATVFNILGQRRNSLEIMS 712


>gi|413945326|gb|AFW77975.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
          Length = 719

 Score = 1236 bits (3199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/724 (83%), Positives = 653/724 (90%), Gaps = 13/724 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLK--KRPNGVC 58
           MALS FS P               P     F +A+  H +  L    I LK  +RP  V 
Sbjct: 1   MALSTFSVPRGFLGV---------PAQDSHFASAVELHVNKLLQARPINLKPRRRPACVS 51

Query: 59  ASLS-ER-GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHL 116
           ASLS ER  EY+SQRPPTPLLDTINYP+HMKNLS++EL+QLADELR+DVIF+VSKTGGHL
Sbjct: 52  ASLSSEREAEYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGGHL 111

Query: 117 GSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           GSSLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM TMRQT+GL+GFTKR
Sbjct: 112 GSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFTKR 171

Query: 177 SESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL 236
           +ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYL
Sbjct: 172 AESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYL 231

Query: 237 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 296
           DSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG
Sbjct: 232 DSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGG 291

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
            +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPV
Sbjct: 292 SVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPV 351

Query: 357 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           LIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D
Sbjct: 352 LIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQD 411

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
             +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+
Sbjct: 412 SKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 471

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAE
Sbjct: 472 QRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAE 531

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           L HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+
Sbjct: 532 LCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGS 591

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
           AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV
Sbjct: 592 AVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 651

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL
Sbjct: 652 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREAL 711

Query: 717 EIMS 720
            IM+
Sbjct: 712 AIMA 715


>gi|2894445|emb|CAA74713.1| transketolase [Arabidopsis thaliana]
          Length = 739

 Score = 1236 bits (3198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/716 (82%), Positives = 647/716 (90%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MA SAF+FP+Y+              +     + +    S  L  +      R   VCAS
Sbjct: 23  MASSAFAFPSYIITKGGLSTDSCKSTSLSSSRSLVTDLPSPCLKPNNNSHSNRRAKVCAS 82

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           L+E+GEY+S RPPTPLLDTINYPIHMKNLS++ELKQL+DELR+DVIFNVSKTGGHLGSSL
Sbjct: 83  LAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL 142

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM TMRQT+GLSGFTKR ESE
Sbjct: 143 GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE 202

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +DCFGTGHSST+ISAGLGMA+GRDLKG+ NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 203 HDCFGTGHSSTTISAGLGMAIGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 262

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  LRELREVAKG+TKQIGGPMH+
Sbjct: 263 IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ 322

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           +AAKVD YARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHV
Sbjct: 323 VAAKVDVYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV 382

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++  TQSYTTYFAEAL+AEAEVDKDVV
Sbjct: 383 VTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNETQSYTTYFAEALVAEAEVDKDVV 442

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
Sbjct: 443 AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 502

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+M
Sbjct: 503 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM 562

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQS
Sbjct: 563 VATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQS 622

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 623 CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 682

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           A DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 683 ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 738


>gi|145652152|gb|ABP88134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 719

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/724 (83%), Positives = 653/724 (90%), Gaps = 13/724 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLK--KRPNGVC 58
           MALS FS P               P     F +A+  H +  L    I LK  +RP  V 
Sbjct: 1   MALSTFSVPRGFLGV---------PAQDSHFASAVELHVNKLLQARPINLKPRRRPACVS 51

Query: 59  ASLS-ER-GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHL 116
           ASLS ER  EY+SQRPPTPLLDTINYP+HMKNLS++EL+QLADELR+DVIF+VSKTGGHL
Sbjct: 52  ASLSSEREAEYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGGHL 111

Query: 117 GSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           GSSLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM TMRQT+GL+GFTKR
Sbjct: 112 GSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFTKR 171

Query: 177 SESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL 236
           +ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYL
Sbjct: 172 AESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYL 231

Query: 237 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 296
           DSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG
Sbjct: 232 DSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGG 291

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
            +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPV
Sbjct: 292 SVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPV 351

Query: 357 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           LIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D
Sbjct: 352 LIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQD 411

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
             +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+
Sbjct: 412 SKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 471

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAE
Sbjct: 472 QRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAE 531

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           L HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+
Sbjct: 532 LCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGS 591

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
           AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH+
Sbjct: 592 AVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHI 651

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL
Sbjct: 652 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREAL 711

Query: 717 EIMS 720
            IM+
Sbjct: 712 AIMA 715


>gi|256355109|ref|NP_001157805.1| deoxy xylulose synthase 1 [Zea mays]
 gi|253558917|gb|ACT32136.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 719

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/724 (83%), Positives = 652/724 (90%), Gaps = 13/724 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLK--KRPNGVC 58
           MALS FS P               P     F +A+  H +  L    I LK  +RP  V 
Sbjct: 1   MALSTFSVPRGFLGV---------PAQDSHFASAVELHVNKLLQARPINLKPRRRPACVS 51

Query: 59  ASLS-ER-GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHL 116
           ASLS ER  EY+SQRPPTPLLDTINYP+HMKNLS++EL+QLADELR+DVIF+VSKTGGHL
Sbjct: 52  ASLSSEREAEYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGGHL 111

Query: 117 GSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           GSSLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM TMRQT+GL+GFTKR
Sbjct: 112 GSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFTKR 171

Query: 177 SESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL 236
           +ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYL
Sbjct: 172 AESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYL 231

Query: 237 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 296
           DSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVT+QIGG
Sbjct: 232 DSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTRQIGG 291

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
            +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPV
Sbjct: 292 SVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPV 351

Query: 357 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           LIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D
Sbjct: 352 LIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQD 411

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
             +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+
Sbjct: 412 SKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 471

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAE
Sbjct: 472 QRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAE 531

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           L HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+
Sbjct: 532 LCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGS 591

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
           AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV
Sbjct: 592 AVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 651

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL
Sbjct: 652 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREAL 711

Query: 717 EIMS 720
            IM+
Sbjct: 712 AIMA 715


>gi|195612150|gb|ACG27905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zea mays]
          Length = 719

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/724 (83%), Positives = 651/724 (89%), Gaps = 13/724 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLK--KRPNGVC 58
           MALS FS P               P     F +A+  H    L    I LK  +RP  V 
Sbjct: 1   MALSTFSVPRGFLGV---------PAQDSHFASAVELHVHKLLQARPINLKPRRRPACVS 51

Query: 59  ASLS-ER-GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHL 116
           ASLS ER  EY+SQRPPTPLLDTINYP+HMKNLS++EL+QLADELR+DVIF+VSKTGGHL
Sbjct: 52  ASLSSEREAEYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGGHL 111

Query: 117 GSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           GSSLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM TMRQT+GL+GFTKR
Sbjct: 112 GSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFTKR 171

Query: 177 SESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL 236
           +ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYL
Sbjct: 172 AESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYL 231

Query: 237 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 296
           DSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG
Sbjct: 232 DSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGG 291

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
            +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPV
Sbjct: 292 SVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPV 351

Query: 357 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           LIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D
Sbjct: 352 LIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQD 411

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
             +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+
Sbjct: 412 SKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFL 471

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAE
Sbjct: 472 QRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAE 531

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           L HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+
Sbjct: 532 LCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGS 591

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
           AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV
Sbjct: 592 AVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 651

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL
Sbjct: 652 AQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREAL 711

Query: 717 EIMS 720
            IM+
Sbjct: 712 AIMA 715


>gi|30144404|gb|AAP14353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
          Length = 691

 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/662 (88%), Positives = 628/662 (94%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ASL+ERGEY S++PPTPLLDTI+YPIHMKNLS +ELKQLADE R+DVIFNVSKTGGHLGS
Sbjct: 30  ASLAERGEYFSEKPPTPLLDTIDYPIHMKNLSTKELKQLADEPRSDVIFNVSKTGGHLGS 89

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGVIELTVA+HYVFNAP+DRILWDVGHQ+YPHKILTGRR+ M T+RQTDGL GFTKRSE
Sbjct: 90  SLGVIELTVAIHYVFNAPQDRILWDVGHQSYPHKILTGRRNMMPTLRQTDGLCGFTKRSE 149

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           S YDCFG GHSST+ISAGLGMAVGRDL+GRKN+VVAVIGDGAM AGQAYEAMNNAGYLDS
Sbjct: 150 SNYDCFGAGHSSTTISAGLGMAVGRDLQGRKNHVVAVIGDGAMIAGQAYEAMNNAGYLDS 209

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           DMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG M
Sbjct: 210 DMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGSM 269

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARG+ISGSGSTLFEELGLYYIGPVDGHN+DDL AIL+EVK+TKTTGPV I
Sbjct: 270 HELAAKVDEYARGLISGSGSTLFEELGLYYIGPVDGHNIDDLTAILKEVKSTKTTGPVSI 329

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGY YAEKAADKYHGVAKFDPATGKQFKSS  TQ+YTTYFAEALIAEAE D  
Sbjct: 330 HVVTEKGRGYSYAEKAADKYHGVAKFDPATGKQFKSSTPTQAYTTYFAEALIAEAEQDNI 389

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR
Sbjct: 390 IVAIHAAMGGGTGLNLFDRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQR 449

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAP+DEAELF
Sbjct: 450 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPADEAELF 509

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE+GKGRIL+EGERVALLGYGTAV
Sbjct: 510 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEIGKGRILLEGERVALLGYGTAV 569

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           QSC+ A+AL+E +GL+LTVADARFCKPLD  LIR LA SHEVLITVEEG++GGF +HV Q
Sbjct: 570 QSCMTAAALMEPHGLQLTVADARFCKPLDQGLIRRLANSHEVLITVEEGAVGGFAAHVAQ 629

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           F+A DGLLDG +KWRPLVLPDRYIDHGSPADQL +AGLT  HIAATVFNILG+ REAL+I
Sbjct: 630 FMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLMEAGLTSHHIAATVFNILGKAREALQI 689

Query: 719 MS 720
           MS
Sbjct: 690 MS 691


>gi|357133711|ref|XP_003568467.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 706

 Score = 1231 bits (3184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/686 (86%), Positives = 637/686 (92%), Gaps = 3/686 (0%)

Query: 38  HFSHKLDNHQIQLKKRPNG-VCASLS-ER-GEYHSQRPPTPLLDTINYPIHMKNLSIREL 94
           HF+  L+     LK R    + ASLS ER  EYHSQRPPTPLLDT+NYPIHMKNLS++EL
Sbjct: 17  HFAPALELQTRSLKPRKRSCISASLSAEREAEYHSQRPPTPLLDTVNYPIHMKNLSLKEL 76

Query: 95  KQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKIL 154
           +QL+DELR+DVIF+VSKTGGHLGSSLGV+ELTVALHYVFN P+D+ILWDVGHQ+YPHKIL
Sbjct: 77  QQLSDELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKILWDVGHQSYPHKIL 136

Query: 155 TGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVA 214
           TGRRDKM TMRQT+GLSGF KRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVA
Sbjct: 137 TGRRDKMPTMRQTNGLSGFVKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGAKNNVVA 196

Query: 215 VIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRL 274
           VIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALS ALS+L
Sbjct: 197 VIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSGALSKL 256

Query: 275 QSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDG 334
           QS+RPLRELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGS+LFEELGLYYIGPVDG
Sbjct: 257 QSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSSLFEELGLYYIGPVDG 316

Query: 335 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 394
           HN+DDL+ IL EVK TKTTGPVLIHVVTEKGRGYPYAE+A+DKYHGVAKFDPATGKQFKS
Sbjct: 317 HNIDDLITILREVKGTKTTGPVLIHVVTEKGRGYPYAERASDKYHGVAKFDPATGKQFKS 376

Query: 395 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 454
            A+T SYT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAV
Sbjct: 377 PAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAV 436

Query: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 514
           TFAAGLACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+
Sbjct: 437 TFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 496

Query: 515 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 574
           FDVTFMACLPNMVVMAPSDEAEL +MVATAAAIDDRPSCFRYPRGNGIGV LPP  KGIP
Sbjct: 497 FDVTFMACLPNMVVMAPSDEAELLNMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGIP 556

Query: 575 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 634
           LEVGKGRIL+EGERVALLGYG+AVQ C+AAS+++E +GLR+TVADARFCKPLDHALIRSL
Sbjct: 557 LEVGKGRILMEGERVALLGYGSAVQYCVAASSIVEEHGLRVTVADARFCKPLDHALIRSL 616

Query: 635 AKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 694
           AKSHEV+ITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPD+YIDHGSPADQL +A
Sbjct: 617 AKSHEVIITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPVVLPDKYIDHGSPADQLVEA 676

Query: 695 GLTPSHIAATVFNILGQTREALEIMS 720
           GLTPSHIAATVFNILGQ REAL IM+
Sbjct: 677 GLTPSHIAATVFNILGQAREALAIMT 702


>gi|218196788|gb|EEC79215.1| hypothetical protein OsI_19939 [Oryza sativa Indica Group]
          Length = 720

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/658 (88%), Positives = 624/658 (94%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           E  EYHSQRPPTPLLDT+NYPIHMKNLS++EL+QLADELR+DVIF+VSKTGGHLGSSLGV
Sbjct: 59  EAAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGV 118

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           +ELTVALHYVFN P+D+ILWDVGHQ+YPHKILTGRRDKM TMRQT+GLSGFTKRSESEYD
Sbjct: 119 VELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYD 178

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
            FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV
Sbjct: 179 SFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 238

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG +HELA
Sbjct: 239 ILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELA 298

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+ IL EVK+TKTTGPVLIHVVT
Sbjct: 299 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVT 358

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           EKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  VVAI
Sbjct: 359 EKGRGYPYAERAADKYHGVAKFDPATGKQFKSLAKTLSYTNYFAEALIAEAEQDNRVVAI 418

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
           HAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQ
Sbjct: 419 HAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQ 478

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL HMVA
Sbjct: 479 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVA 538

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCL 602
           TAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKGR+L+EGERVALLGYG+AVQ CL
Sbjct: 539 TAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCL 598

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
           AA++L+E +GL++TVADARFCKPLD ALIR LA SHEVL+TVEEGSIGGFGSHV QF+A 
Sbjct: 599 AAASLVERHGLKVTVADARFCKPLDQALIRRLASSHEVLLTVEEGSIGGFGSHVAQFMAL 658

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQ REAL IM+
Sbjct: 659 DGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIMT 716


>gi|115463849|ref|NP_001055524.1| Os05g0408900 [Oryza sativa Japonica Group]
 gi|90110016|sp|O22567.2|DXS1_ORYSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; Flags:
           Precursor
 gi|49328155|gb|AAT58851.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|113579075|dbj|BAF17438.1| Os05g0408900 [Oryza sativa Japonica Group]
 gi|215694297|dbj|BAG89290.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740838|dbj|BAG96994.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222631568|gb|EEE63700.1| hypothetical protein OsJ_18518 [Oryza sativa Japonica Group]
          Length = 720

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/658 (88%), Positives = 623/658 (94%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           E  EYHSQRPPTPLLDT+NYPIHMKNLS++EL+QLADELR+DVIF+VSKTGGHLGSSLGV
Sbjct: 59  EAAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGV 118

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           +ELTVALHYVFN P+D+ILWDVGHQ+YPHKILTGRRDKM TMRQT+GLSGFTKRSESEYD
Sbjct: 119 VELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYD 178

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
            FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV
Sbjct: 179 SFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 238

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG +HELA
Sbjct: 239 ILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELA 298

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL+ IL EVK+TKTTGPVLIHVVT
Sbjct: 299 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVT 358

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           EKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  VVAI
Sbjct: 359 EKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAI 418

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
           HAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQ
Sbjct: 419 HAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQ 478

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL HMVA
Sbjct: 479 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVA 538

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCL 602
           TAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKGR+L+EGERVALLGYG+AVQ CL
Sbjct: 539 TAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCL 598

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
           AA++L+E +GL++TVADARFCKPLD  LIR LA SHEVL+TVEEGSIGGFGSHV QF+A 
Sbjct: 599 AAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMAL 658

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQ REAL IM+
Sbjct: 659 DGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIMT 716


>gi|242090511|ref|XP_002441088.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
 gi|241946373|gb|EES19518.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
          Length = 722

 Score = 1226 bits (3171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/666 (88%), Positives = 633/666 (95%), Gaps = 2/666 (0%)

Query: 57  VCASLS-ER-GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGG 114
           V ASLS ER  EY+SQRPPTPLLDTINYP+HMKNLS++EL+QLADELR+DVIF+VSKTGG
Sbjct: 53  VSASLSPEREAEYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGG 112

Query: 115 HLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFT 174
           HLGSSLGV+ELTVALHYVFNAP+DRILWDVGHQ+YPHKILTGRRDKM TMRQT+GL+GFT
Sbjct: 113 HLGSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFT 172

Query: 175 KRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG 234
           KR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAG
Sbjct: 173 KRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAG 232

Query: 235 YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI 294
           YLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVTKQI
Sbjct: 233 YLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQI 292

Query: 295 GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG 354
           GG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTG
Sbjct: 293 GGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTG 352

Query: 355 PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAE 414
           PVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAE+LIAEAE
Sbjct: 353 PVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAESLIAEAE 412

Query: 415 VDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 474
            D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS
Sbjct: 413 QDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 472

Query: 475 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE 534
           F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDE
Sbjct: 473 FLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDE 532

Query: 535 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGY 594
           AEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG PLEVGKGRIL+EG+RVALLGY
Sbjct: 533 AELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGTPLEVGKGRILMEGDRVALLGY 592

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           G+AVQ CLAA++L+E +GLR+TVADARFCKPLDHALIRSLA+SHEV+ITVEEGSIGGFGS
Sbjct: 593 GSAVQYCLAAASLVERHGLRVTVADARFCKPLDHALIRSLARSHEVIITVEEGSIGGFGS 652

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           HV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQ RE
Sbjct: 653 HVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQNRE 712

Query: 715 ALEIMS 720
           AL IM+
Sbjct: 713 ALAIMA 718


>gi|326491509|dbj|BAJ94232.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326510627|dbj|BAJ87530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 712

 Score = 1213 bits (3139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/674 (86%), Positives = 631/674 (93%), Gaps = 1/674 (0%)

Query: 51  KKRPNGVCASLSER-GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNV 109
           +KR + + ASLSER  EYHSQRPPTPLLDT+NYPIHMKNLS++EL+QL+DELR+DVIF+V
Sbjct: 38  RKRSSSISASLSEREAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLSDELRSDVIFHV 97

Query: 110 SKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDG 169
           SKTGGHLGSSLGV+ELTVALHYVFN P+D++LWDVGHQ+YPHKILTGRRDKM TMRQT+G
Sbjct: 98  SKTGGHLGSSLGVVELTVALHYVFNTPQDKLLWDVGHQSYPHKILTGRRDKMPTMRQTNG 157

Query: 170 LSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEA 229
           LSGF KRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGAMTAGQAYEA
Sbjct: 158 LSGFIKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGAKNNVVAVIGDGAMTAGQAYEA 217

Query: 230 MNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKG 289
           MNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALS ALS+LQS+RPLRELREVAKG
Sbjct: 218 MNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSGALSKLQSSRPLRELREVAKG 277

Query: 290 VTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN 349
           VTKQIGG +HE+AAKVDEYARGMISGSGS+LFEELGLYYIGPVDGHN+DDL+ IL EVK 
Sbjct: 278 VTKQIGGSVHEIAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDLITILREVKG 337

Query: 350 TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEAL 409
           TKTTGPVLIHV+TEKGRGYPYAE+A+DKYHGVAKFDPATGKQFK  A+T SYT YFAEAL
Sbjct: 338 TKTTGPVLIHVITEKGRGYPYAERASDKYHGVAKFDPATGKQFKVPAKTLSYTNYFAEAL 397

Query: 410 IAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 469
           IAEAE D  +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGLACEGLKPFC
Sbjct: 398 IAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFC 457

Query: 470 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVM 529
           AIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVM
Sbjct: 458 AIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 517

Query: 530 APSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERV 589
           APSDEAEL +MVATAAAIDDRPSCFRYPRGNGIGV LP   KG  +EVGKGRI+IEGERV
Sbjct: 518 APSDEAELLNMVATAAAIDDRPSCFRYPRGNGIGVPLPENYKGTAIEVGKGRIMIEGERV 577

Query: 590 ALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI 649
           ALLGYG+AVQ C+AAS+++  +GLR+TVADARFCKPLDHALIRSLAKSHEV+ITVEEGSI
Sbjct: 578 ALLGYGSAVQYCMAASSIVAQHGLRVTVADARFCKPLDHALIRSLAKSHEVIITVEEGSI 637

Query: 650 GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           GGFGSHV QF+A DGLLDG +KWRP+VLPD+YIDHGSPADQLA+AGLTPSHIAATVFNIL
Sbjct: 638 GGFGSHVAQFMALDGLLDGKLKWRPVVLPDKYIDHGSPADQLAEAGLTPSHIAATVFNIL 697

Query: 710 GQTREALEIMSFKS 723
           GQ REAL IM+ ++
Sbjct: 698 GQAREALAIMTVQN 711


>gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ginkgo biloba]
          Length = 717

 Score = 1198 bits (3100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/683 (84%), Positives = 630/683 (92%), Gaps = 4/683 (0%)

Query: 42  KLDNHQIQLKKRPNG--VCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLAD 99
           K  N + +  +R  G    A+LSE+GEY+S++PPTPLLDTINYPIHMKNLS+RELKQLAD
Sbjct: 35  KPGNLEFEQSRRKVGKAYAAALSEKGEYYSEKPPTPLLDTINYPIHMKNLSLRELKQLAD 94

Query: 100 ELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRD 159
           ELRAD+IF+VS+TGGHLGSSLGVIELTVA+HYVFNAP+D+I WDVGHQ YPHKILTGRRD
Sbjct: 95  ELRADLIFDVSRTGGHLGSSLGVIELTVAIHYVFNAPEDKIFWDVGHQAYPHKILTGRRD 154

Query: 160 KMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDG 219
           KM T+RQT+GLSGFTKRSESEYD FG GHSSTSISAGLGMAVGRDLKGR N+V++VIGDG
Sbjct: 155 KMPTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDG 214

Query: 220 AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 279
           AMTAGQAYEAMNNAGYLDS+MIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQS+RP
Sbjct: 215 AMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSSRP 274

Query: 280 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 339
           LRELREVAKGVTKQ+GG MHELAAKVDEYARGMISGS STLFEE+GLYYIGPVDGHN+DD
Sbjct: 275 LRELREVAKGVTKQLGGSMHELAAKVDEYARGMISGSRSTLFEEMGLYYIGPVDGHNIDD 334

Query: 340 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 399
           LV IL EVK T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK  A+TQ
Sbjct: 335 LVTILREVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAQTQ 394

Query: 400 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 459
           SYTTYFAEALIAEAEVDK++VAIHAAMGGGTGLN+FL+RFP+RCFDVGIAEQHAVTFAAG
Sbjct: 395 SYTTYFAEALIAEAEVDKNIVAIHAAMGGGTGLNMFLKRFPSRCFDVGIAEQHAVTFAAG 454

Query: 460 LACEGLKPFCAIYSSFMQRAY--DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 517
           LACEGLKPFCAIYSSF+QRAY       DVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV
Sbjct: 455 LACEGLKPFCAIYSSFLQRAYDQVVHDVDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDV 514

Query: 518 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 577
           T+++CLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LP GNKG+PLEV
Sbjct: 515 TYLSCLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPIGNKGVPLEV 574

Query: 578 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 637
           GKGRIL EG+RVALLGYGT VQ+CLAA ALLE  GL LTVADARFCKPLD  LIRSLA+ 
Sbjct: 575 GKGRILAEGDRVALLGYGTVVQNCLAAGALLEEQGLSLTVADARFCKPLDRDLIRSLARE 634

Query: 638 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 697
           HEVLITVEEGSIGGFGSHV QFL+ DGLLDG +KWRPLVLPDRYI+HG+P DQ+A AGLT
Sbjct: 635 HEVLITVEEGSIGGFGSHVSQFLSLDGLLDGKLKWRPLVLPDRYIEHGAPIDQMADAGLT 694

Query: 698 PSHIAATVFNILGQTREALEIMS 720
            SHIAA+V NILG+TR+A +IMS
Sbjct: 695 ASHIAASVLNILGRTRDAPQIMS 717


>gi|153799534|gb|ABS50518.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Picea abies]
          Length = 717

 Score = 1196 bits (3095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/662 (84%), Positives = 622/662 (93%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           A+LS++GEY+S++PPTPLLDTINYPIHMKNLSIRELKQL++ELR+D IF V++TGGHLGS
Sbjct: 56  AALSDQGEYYSEKPPTPLLDTINYPIHMKNLSIRELKQLSNELRSDTIFEVARTGGHLGS 115

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALHYVF+AP+D+ILWDVGH  YPHKILTGRRDKM T+RQT+GLSGFTKRSE
Sbjct: 116 SLGVVELTVALHYVFDAPEDKILWDVGHXAYPHKILTGRRDKMPTLRQTNGLSGFTKRSE 175

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYDCFG GHSSTSISAGLGMAVGRDLKGR N+V++VIGDGAMTAGQA+EAMNNAGYLDS
Sbjct: 176 SEYDCFGAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDGAMTAGQAFEAMNNAGYLDS 235

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           +MIVILNDNKQVSLPTA LDGP+PPVGALSSALS+LQS++PLRELREVAKGVTKQ+G PM
Sbjct: 236 NMIVILNDNKQVSLPTANLDGPMPPVGALSSALSKLQSSKPLRELREVAKGVTKQLGAPM 295

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HELAAKVDEYARGMISGS STLFEELGLYYIGPVDGHN+DDL+ IL++VK T TTGPVLI
Sbjct: 296 HELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDLLTILQDVKATHTTGPVLI 355

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYA +AADKYHGVAKFDPATGKQFK  A TQ+YT YFAEALI+EA++D  
Sbjct: 356 HVVTEKGRGYPYAXRAADKYHGVAKFDPATGKQFKGKAPTQTYTAYFAEALISEADIDNX 415

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           VVAIHAAMGGGTGLN+F +RFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR
Sbjct: 416 VVAIHAAMGGGTGLNMFSKRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQR 475

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQV+HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT++ACLPNMVVMAPSDEAELF
Sbjct: 476 AYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYLACLPNMVVMAPSDEAELF 535

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFR+PRGNG+G  LPPGNKG+PLEVGKGRIL+EG+RVALLGYGT V
Sbjct: 536 HMVATAAAIDDRPSCFRFPRGNGVGARLPPGNKGVPLEVGKGRILLEGDRVALLGYGTVV 595

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+CLAASALLE  GL LTVADARFCKPLD  LIRSLA+ HEV+ITVEEG+IGGFGSHV  
Sbjct: 596 QNCLAASALLEEQGLSLTVADARFCKPLDRDLIRSLAREHEVIITVEEGTIGGFGSHVAH 655

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           FLA DG LDG +KWRP+VLPD YI+HG+P DQ+ +AGLT SHIAA+V NILG+TREAL++
Sbjct: 656 FLALDGFLDGKLKWRPMVLPDHYIEHGAPNDQMVEAGLTASHIAASVLNILGRTREALQV 715

Query: 719 MS 720
           MS
Sbjct: 716 MS 717


>gi|357447515|ref|XP_003594033.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355483081|gb|AES64284.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 718

 Score = 1180 bits (3052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/726 (79%), Positives = 650/726 (89%), Gaps = 15/726 (2%)

Query: 1   MALSAFS-FPTYVSK-ATNSGPHKSSPV--TSHFFGAA-LFSHFSHKLDNHQIQLKKRPN 55
           MAL   S FP ++++ A +  P KS+P+  +++ +GA+ L SH  HKL+    Q++K P 
Sbjct: 1   MALMNTSPFPIHLNQSAKHFDPKKSTPLGGSNYQWGASDLISH--HKLN----QVRKIPY 54

Query: 56  GVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGH 115
           GVCAS+SE GEYH +R PTPLLDTINYPIHMKNLS +ELKQLA ELR+D+IF+VS+TGGH
Sbjct: 55  GVCASISETGEYHYERQPTPLLDTINYPIHMKNLSNKELKQLACELRSDIIFSVSQTGGH 114

Query: 116 LGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTK 175
           LGS+LGV+ELTVALHYVFNAP D+ILWDVGHQ+YPHKILTGRR+KMHT+RQ DGLSGFTK
Sbjct: 115 LGSNLGVVELTVALHYVFNAPIDKILWDVGHQSYPHKILTGRRNKMHTLRQKDGLSGFTK 174

Query: 176 RSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 235
           RSESE+D FGTGHSST+ISAGLGMAVGRDLKG K+NVV +IGDGAMTAGQA+EAMNNAGY
Sbjct: 175 RSESEFDIFGTGHSSTTISAGLGMAVGRDLKGEKHNVVTIIGDGAMTAGQAFEAMNNAGY 234

Query: 236 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG 295
           L+S+MIVILNDNKQVSLPTA LDGPIPPVGALS  LSRLQSN PLRELREVAKGVTKQ G
Sbjct: 235 LNSNMIVILNDNKQVSLPTADLDGPIPPVGALSRTLSRLQSNIPLRELREVAKGVTKQNG 294

Query: 296 GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGP 355
            P+    AKV+EYA GMISGSGSTLFEELGL YIGPVDGH++DDLVAIL++VK+ K TGP
Sbjct: 295 RPI----AKVEEYALGMISGSGSTLFEELGLDYIGPVDGHSIDDLVAILKQVKSPKKTGP 350

Query: 356 VLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEV 415
           VLIHVVTEKG GY YAEKAADKYHGVAKFDPATGKQFK+ A T   T+ F +ALIAEAE 
Sbjct: 351 VLIHVVTEKGLGYSYAEKAADKYHGVAKFDPATGKQFKTKAPTPVLTSCFVDALIAEAEA 410

Query: 416 DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 475
           DK +V IHAAMGGGTG+N FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF
Sbjct: 411 DKGIVGIHAAMGGGTGMNHFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 470

Query: 476 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA 535
           +QRAYDQVVHDVDLQKLPVRF +D+AG VG DGPTHCGSFDVT+MACLPNMVVMAPSDEA
Sbjct: 471 LQRAYDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTHCGSFDVTYMACLPNMVVMAPSDEA 530

Query: 536 ELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYG 595
           E+ HMVATA AI+DRPSCFR+PR NG GVELPPGN+GIP+E+GKGRILIEGERVALLG+G
Sbjct: 531 EIIHMVATAVAINDRPSCFRFPRANGTGVELPPGNRGIPMEIGKGRILIEGERVALLGFG 590

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           TAVQ+C+AA+++LE +GLR+TVADARFCKPLDH+LIRSLAKSHEVLITVEEGSIGGFGSH
Sbjct: 591 TAVQNCVAAASMLEDHGLRVTVADARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSH 650

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           V QF+A DGLLDG +KWRP+V PD YIDHGSPA+QLA AGLT SHIAATVFNILGQTREA
Sbjct: 651 VAQFMALDGLLDGKLKWRPMVFPDIYIDHGSPAEQLAVAGLTSSHIAATVFNILGQTREA 710

Query: 716 LEIMSF 721
           LE+M+ 
Sbjct: 711 LEVMTL 716


>gi|183206797|gb|ACC54557.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 1 [Pinus
           densiflora]
          Length = 707

 Score = 1179 bits (3051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 553/686 (80%), Positives = 627/686 (91%), Gaps = 8/686 (1%)

Query: 39  FSHKLDNHQIQLKKRPNGV----CASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIREL 94
             H++   +++ KK    V     ++LS++GEY+S++PPTPLLDTINYPIHMKNLSIREL
Sbjct: 26  LCHQIKPAKLESKKLGRRVGKAYASALSDQGEYYSEKPPTPLLDTINYPIHMKNLSIREL 85

Query: 95  KQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKIL 154
           KQL++ELR+D+IF VS+TGGHLGSSLGV+ELTVALHYVF+AP+D+ILWDVGHQ YPHKIL
Sbjct: 86  KQLSNELRSDIIFEVSRTGGHLGSSLGVVELTVALHYVFDAPEDKILWDVGHQAYPHKIL 145

Query: 155 TGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVA 214
           TGRRDKM T+RQT+GLSGFTKRSESEYDCFG GHSSTSISAGLGMA GRDLKG+ N+V++
Sbjct: 146 TGRRDKMPTLRQTNGLSGFTKRSESEYDCFGAGHSSTSISAGLGMAAGRDLKGKNNHVIS 205

Query: 215 VIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRL 274
           VIGDGAMTAGQA+EAMNNA YLDS+MIVILNDNKQVSLPTA LDGPIPPVGALS    +L
Sbjct: 206 VIGDGAMTAGQAFEAMNNARYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALS----KL 261

Query: 275 QSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDG 334
           QS++PLRELREVAKGVTKQ+G PMHELAAKVDEYARGMISGS STLFEELGLYYIGPVDG
Sbjct: 262 QSSKPLRELREVAKGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDG 321

Query: 335 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 394
           HN+DDL+ IL +VK T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK 
Sbjct: 322 HNIDDLLTILRDVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKG 381

Query: 395 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 454
            A TQ+YTTYFAEALI+EAE DK++VA+HAAMGGGTGLN+F +RFPTRCFDVGIAEQHAV
Sbjct: 382 KAPTQTYTTYFAEALISEAEADKNIVAVHAAMGGGTGLNMFSKRFPTRCFDVGIAEQHAV 441

Query: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 514
           TFAAGLACEGLKPFCAIYSSF+QRAYDQV+HDVDLQ LPVRFAMDRAGLVGADGPTHCG+
Sbjct: 442 TFAAGLACEGLKPFCAIYSSFLQRAYDQVIHDVDLQNLPVRFAMDRAGLVGADGPTHCGA 501

Query: 515 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 574
           FDVT++ACLPNMVVMAPS+EAELFHMVATAAAIDDRPSCF +PRGNG+G +LPPGNKG+P
Sbjct: 502 FDVTYLACLPNMVVMAPSNEAELFHMVATAAAIDDRPSCFGFPRGNGVGAQLPPGNKGVP 561

Query: 575 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 634
           LE+GKGRIL+EG+RVALLGYGT VQ+CLAASALLE   L +TVADARFCKPLD  L+RSL
Sbjct: 562 LEIGKGRILVEGDRVALLGYGTVVQNCLAASALLEEQDLSVTVADARFCKPLDRDLVRSL 621

Query: 635 AKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 694
           A+ HEVLITVEEG+IGGFGSHV  FLA DG LDG +KWRP+VLPD YI+HG+P+DQ+ +A
Sbjct: 622 AREHEVLITVEEGTIGGFGSHVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPSDQMIEA 681

Query: 695 GLTPSHIAATVFNILGQTREALEIMS 720
           GLT SHIAA+V N+LG+TREAL++MS
Sbjct: 682 GLTASHIAASVLNMLGRTREALQVMS 707


>gi|168007322|ref|XP_001756357.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
           patens]
 gi|162692396|gb|EDQ78753.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
           patens]
          Length = 729

 Score = 1177 bits (3045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/676 (82%), Positives = 614/676 (90%), Gaps = 5/676 (0%)

Query: 50  LKKRPNG---VCASL--SERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRAD 104
           L+ R NG   + AS       EY +++PPTPLLDTINYP+HMKNL++RELKQLA+E+RA+
Sbjct: 54  LRLRSNGKSRIAASAVPDSSAEYPAEKPPTPLLDTINYPMHMKNLTVRELKQLANEVRAE 113

Query: 105 VIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTM 164
            I  VSKTGGHLGSSLGV+ELTVALH+VFN P+D+ LWDVGHQTYPHKILTGRR KMHT+
Sbjct: 114 TIHTVSKTGGHLGSSLGVVELTVALHHVFNCPEDKFLWDVGHQTYPHKILTGRRGKMHTL 173

Query: 165 RQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAG 224
           RQTDGLSGF KR+ESEYD FG GHSSTSISAGLGMAVGRDLKG+KNNV+AVIGDGAMTAG
Sbjct: 174 RQTDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNVIAVIGDGAMTAG 233

Query: 225 QAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELR 284
           QAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS+RPLRELR
Sbjct: 234 QAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPLRELR 293

Query: 285 EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL 344
           EVAKGVTKQ+GGP H LA+KVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV IL
Sbjct: 294 EVAKGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVTIL 353

Query: 345 EEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTY 404
            EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KFDPATGKQ K  A TQ+YTTY
Sbjct: 354 REVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPATGKQNKVKAPTQAYTTY 413

Query: 405 FAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 464
           FAEALIAEAEVDKDVV IHAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGLACEG
Sbjct: 414 FAEALIAEAEVDKDVVGIHAAMGGGTGMNIFAKRFPERCFDVGIAEQHAVTFAAGLACEG 473

Query: 465 LKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLP 524
           LKPFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLP
Sbjct: 474 LKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLP 533

Query: 525 NMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI 584
           NMVVMAP+DEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LP  NKGIP+EVG+GRIL+
Sbjct: 534 NMVVMAPADEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPAKNKGIPIEVGRGRILL 593

Query: 585 EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITV 644
           EG  VALLGYGT VQ+CLAA  LL   G+  TVADARFCKPLD  LIR LAK+H+VLITV
Sbjct: 594 EGTEVALLGYGTMVQNCLAAHVLLADLGVSATVADARFCKPLDRDLIRQLAKNHQVLITV 653

Query: 645 EEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 704
           EEGSIGGFGSHVVQF+A DGLLDG +KWRPLVLPDRYI+HG+P DQ A+AGLT  HIAAT
Sbjct: 654 EEGSIGGFGSHVVQFMALDGLLDGKLKWRPLVLPDRYIEHGAPKDQYAEAGLTAGHIAAT 713

Query: 705 VFNILGQTREALEIMS 720
             N+LG+TREAL++M+
Sbjct: 714 ALNVLGKTREALQVMT 729


>gi|374639399|gb|AEZ55688.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 703

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/721 (80%), Positives = 638/721 (88%), Gaps = 23/721 (3%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MAL+  SF   + K   S  H     ++   G     HFS K        K+  +G+CAS
Sbjct: 1   MALNTLSFCGSLRKGVGSDAH-----SNRLHGVDQQCHFSFKA-------KRSSSGICAS 48

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
            S+RGEY S++PPTPLLD+INYP HMKNLS++EL+QLADELR+D+IFNVSKTGGHLGS L
Sbjct: 49  SSKRGEYFSEKPPTPLLDSINYPNHMKNLSLKELQQLADELRSDLIFNVSKTGGHLGSGL 108

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GVIELTVALHYVF AP+DRILWDVGHQ+YPHKILTGRRD+M T+RQTDGLSGFTKRSES+
Sbjct: 109 GVIELTVALHYVFEAPQDRILWDVGHQSYPHKILTGRRDRMPTLRQTDGLSGFTKRSESD 168

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YDCFG GHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 169 YDCFGAGHSSTTISAGLGMAVGRDLKGRKNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 228

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGP PPVGALS ALSRLQSNRPLREL E +KG      G MHE
Sbjct: 229 IVILNDNKQVSLPTATLDGPSPPVGALSRALSRLQSNRPLRELGEASKG------GSMHE 282

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAK   + RG++SGSGSTLFEELGLYYIGPVDGHN+ DL  IL  VKNTK TGPVLIHV
Sbjct: 283 LAAK---HGRGLMSGSGSTLFEELGLYYIGPVDGHNIHDLTTILARVKNTKITGPVLIHV 339

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKG+GYPYAE+AADKYHGV+KFDPATGKQFK++ARTQSYTT FA ALIAEAE D+DVV
Sbjct: 340 VTEKGKGYPYAERAADKYHGVSKFDPATGKQFKANARTQSYTTCFARALIAEAEADEDVV 399

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGL+LF  RFPTRCFDVGIAEQHAVTFAAGLACEG+KPFCAIYSSFMQRAY
Sbjct: 400 AIHAAMGGGTGLDLFNHRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAY 459

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV+FMACLPNMVVMAPSDEAEL HM
Sbjct: 460 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVSFMACLPNMVVMAPSDEAELCHM 519

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           V+TAAAIDDRP CFRYPRG+G+GVELPPGNKG+PLEVG+GRIL+EGERVALLGYG AVQS
Sbjct: 520 VSTAAAIDDRPCCFRYPRGDGVGVELPPGNKGVPLEVGRGRILVEGERVALLGYGAAVQS 579

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CLAA+ALLE +GLRLTVADARFCKPLD AL+R+LA++H+ LITVEEGS+GGFGSHV  FL
Sbjct: 580 CLAAAALLEPHGLRLTVADARFCKPLDRALVRNLARTHDALITVEEGSVGGFGSHVAHFL 639

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG--QTREALEI 718
           A DGLLDG +KWRPLVLPDRY+DHG+PADQL Q GLTPS IAAT+FNILG  ++REALEI
Sbjct: 640 ALDGLLDGNLKWRPLVLPDRYVDHGAPADQLTQVGLTPSCIAATIFNILGSWKSREALEI 699

Query: 719 M 719
           +
Sbjct: 700 I 700


>gi|374669414|gb|AEZ55865.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 1 [Mitragyna
           speciosa]
          Length = 669

 Score = 1172 bits (3032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/670 (86%), Positives = 619/670 (92%), Gaps = 3/670 (0%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MA SA +FP  +S+   S   K   + S++      +    +  +   Q+ K+ NGV AS
Sbjct: 1   MAFSALAFPGNLSRTVVSDSLKQRFLYSNWLYG---TDLQFQFQSQSSQVMKKSNGVRAS 57

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           LSERGEY+S RPPTPLLDTINYPIHMKNLS +ELKQLAD LR+D+IFNVSKTGGHLGSSL
Sbjct: 58  LSERGEYYSHRPPTPLLDTINYPIHMKNLSTKELKQLADVLRSDIIFNVSKTGGHLGSSL 117

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHYVFN P+D+ILWDVGHQ+YPHKILTGRR KM T+RQTDGLSGFTKRSESE
Sbjct: 118 GVVELTVALHYVFNCPQDKILWDVGHQSYPHKILTGRRYKMPTLRQTDGLSGFTKRSESE 177

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YDCFG GHSSTSISAGLGMAVGRDLKGRKN+VVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 178 YDCFGAGHSSTSISAGLGMAVGRDLKGRKNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 237

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG +HE
Sbjct: 238 IVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGSVHE 297

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARG+ISGSGSTLFEELG YYIGPVDGH++DDLVAIL+EVK+TKTTGPVLIHV
Sbjct: 298 LAAKVDEYARGLISGSGSTLFEELGFYYIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHV 357

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSS +TQSYTTYFAEAL+AEAE DKDVV
Sbjct: 358 VTEKGRGYPYAEKAADKYHGVVKFDPATGKQFKSSGKTQSYTTYFAEALVAEAEADKDVV 417

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLNLFL RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
Sbjct: 418 AIHAAMGGGTGLNLFLHRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 477

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV FMACLPNMVVMAPSDEAE+FHM
Sbjct: 478 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAFMACLPNMVVMAPSDEAEVFHM 537

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSC RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS
Sbjct: 538 VATAAAIDDRPSCLRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 597

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CLAA+AL+E +GLRLTVADARFCKPLDH+LIRSLAKSHEVLITVEEGSIGGFGSHV QF+
Sbjct: 598 CLAAAALVEPHGLRLTVADARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFM 657

Query: 661 AQDGLLDGTV 670
           A +GLLDG +
Sbjct: 658 ALNGLLDGNL 667


>gi|168002605|ref|XP_001754004.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694980|gb|EDQ81326.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 725

 Score = 1170 bits (3027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 558/695 (80%), Positives = 616/695 (88%), Gaps = 1/695 (0%)

Query: 27  TSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCASLSERG-EYHSQRPPTPLLDTINYPIH 85
           +S FFG    +    +  +  ++  ++   + A + E G EY S++PPTPLLDT+NYP+H
Sbjct: 31  SSGFFGIQKLNLLRGQHTSLCLRSNEKSKILAAKVPENGAEYPSEKPPTPLLDTVNYPVH 90

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MKNL+ RELKQLADELRA+ I  VSKTGGHLGSSLGV+ELTVALHYVFNAP D+ILWDVG
Sbjct: 91  MKNLTKRELKQLADELRAETIHTVSKTGGHLGSSLGVVELTVALHYVFNAPDDKILWDVG 150

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQTYPHKILTGRR KM T+RQTDGLSGF KR+ESEYD FG GHSSTSISAGLGMAVGRDL
Sbjct: 151 HQTYPHKILTGRRGKMQTLRQTDGLSGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRDL 210

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVG 265
           KG+KNNV++VIGDGAMTAGQAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPVG
Sbjct: 211 KGKKNNVISVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVG 270

Query: 266 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 325
           ALSSALSRLQS+RPLRELREVAKGVTKQ GG  H LA+KVDEYARGMISGSGSTLFEELG
Sbjct: 271 ALSSALSRLQSSRPLRELREVAKGVTKQFGGSAHILASKVDEYARGMISGSGSTLFEELG 330

Query: 326 LYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFD 385
           LYYIGPVDGHN+DDLV IL EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KFD
Sbjct: 331 LYYIGPVDGHNLDDLVTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFD 390

Query: 386 PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFD 445
           PATGKQ K    TQ+YTTYFAEALIAEAE+DK ++ IHAAMGGGTG+N+F +RFP RCFD
Sbjct: 391 PATGKQKKVKTATQAYTTYFAEALIAEAELDKSIIGIHAAMGGGTGMNMFAKRFPERCFD 450

Query: 446 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 505
           VGIAEQHAVTFAAGLACEGLKPFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVG
Sbjct: 451 VGIAEQHAVTFAAGLACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVG 510

Query: 506 ADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE 565
           ADGPTHCG+FDVT+MACLPNMVVMAPSDEAELF+MVATA  I+DRPSCFRYPRGNGIGVE
Sbjct: 511 ADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFNMVATAVTIEDRPSCFRYPRGNGIGVE 570

Query: 566 LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 625
           LP  NKG P+EVGKGRIL+EG +VALLGYGT VQ+CLAA +LL   G+  TVAD RFCKP
Sbjct: 571 LPANNKGAPIEVGKGRILLEGTQVALLGYGTMVQNCLAAHSLLAKLGISATVADGRFCKP 630

Query: 626 LDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 685
           LD  LIR LAK+H+VLITVEEGSIGGFGSHV QF+A DGLLDG ++WRPLVLPDRYI+HG
Sbjct: 631 LDRDLIRQLAKNHQVLITVEEGSIGGFGSHVAQFMALDGLLDGKLQWRPLVLPDRYIEHG 690

Query: 686 SPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           SP DQ A+AGLT  HIAATV N+LG+TREALE+MS
Sbjct: 691 SPKDQYAEAGLTAGHIAATVLNVLGKTREALELMS 725


>gi|357478565|ref|XP_003609568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355510623|gb|AES91765.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 672

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/725 (79%), Positives = 622/725 (85%), Gaps = 58/725 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHF-----FGAALFSHFSHKLDNHQIQLKKRPN 55
           M L + + P++V   T   P ++ P+ S       +G   FSH          +LKK+  
Sbjct: 1   MDLCSLACPSFV---TPCDPRRTLPLPSSSSSHSQWGLHFFSH-----SQQHNKLKKKFG 52

Query: 56  GVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGH 115
            V ASLSE GEY+SQRPPTPLLDTINYPIHMKNLS                         
Sbjct: 53  VVHASLSEMGEYYSQRPPTPLLDTINYPIHMKNLST------------------------ 88

Query: 116 LGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTK 175
                                KD+ILWDVGHQ+YPHKILTGRRDKMHTMRQT+GLSGFTK
Sbjct: 89  ---------------------KDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTK 127

Query: 176 RSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 235
           RSESEYD FGTGHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGAMTAGQAYEAMNNAGY
Sbjct: 128 RSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGY 187

Query: 236 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG 295
           LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN+PLRELREVAKGVTK+IG
Sbjct: 188 LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIG 247

Query: 296 GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGP 355
           GPMHELAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDLVAIL+EVK T +TGP
Sbjct: 248 GPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKTTNSTGP 307

Query: 356 VLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEV 415
           VLIHV+TEKGRGYPYAEKAADKYHGVAKFDP TGKQFK +A+TQSYTTYFAEALIAEA+ 
Sbjct: 308 VLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQSYTTYFAEALIAEAKA 367

Query: 416 DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 475
           DKD++AIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF
Sbjct: 368 DKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 427

Query: 476 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA 535
           +QRAYDQVVHDVDLQKLPVRFAMDRAGLVG+DGPTH GSFDVTFMACLPNMVVMAPSDEA
Sbjct: 428 LQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFMACLPNMVVMAPSDEA 487

Query: 536 ELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYG 595
           EL HMVATAAAIDDRPSCFRYPRGNGIGVELP   KGIPLE+GKGRILIEGERVALLGYG
Sbjct: 488 ELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKGRILIEGERVALLGYG 547

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           +AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEVLITVEEGSIGGFGSH
Sbjct: 548 SAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEVLITVEEGSIGGFGSH 607

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           V QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL  AGLTPSHIAATVFNILGQTREA
Sbjct: 608 VAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSHIAATVFNILGQTREA 667

Query: 716 LEIMS 720
           LE+MS
Sbjct: 668 LEVMS 672


>gi|215478268|gb|ACJ67021.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Pinus taeda]
          Length = 707

 Score = 1158 bits (2995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/674 (80%), Positives = 617/674 (91%), Gaps = 5/674 (0%)

Query: 48  IQLKKRPNGVCAS-LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVI 106
           ++L +R     AS LS++GEY+S++PPTPLLDTINYPIHMKNLSIRELKQL++ELR+D+I
Sbjct: 38  MKLGRRVGKAYASALSDQGEYYSEKPPTPLLDTINYPIHMKNLSIRELKQLSNELRSDII 97

Query: 107 FNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQ 166
           F+V++TGGHL ++LGV++LTVALHYVFN P D+I+WDVGHQ+YP+KILTGRR KM T+RQ
Sbjct: 98  FDVAETGGHLSANLGVVDLTVALHYVFNTPHDKIVWDVGHQSYPYKILTGRRSKMSTLRQ 157

Query: 167 TDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQA 226
           T G++GF +R ESE+D FG GHSSTSISA +GMAVGRDL G+ N+V+ VIGDGAMTAGQA
Sbjct: 158 TSGIAGFPRRVESEHDAFGAGHSSTSISAAVGMAVGRDLLGKHNHVIGVIGDGAMTAGQA 217

Query: 227 YEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREV 286
           YEAMNNAG+LDS+MIVILNDNKQVSLPTA LDGPIPPVGALS    +LQS++PLRELREV
Sbjct: 218 YEAMNNAGFLDSNMIVILNDNKQVSLPTANLDGPIPPVGALS----KLQSSKPLRELREV 273

Query: 287 AKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEE 346
           AKGVTKQ+G PMHELAAKVDEYARGMISGS STLFEELGLYYIGPVDGHN+DDL+ IL E
Sbjct: 274 AKGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDLLTILRE 333

Query: 347 VKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFA 406
           VK T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK  A TQ+YTTYFA
Sbjct: 334 VKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAPTQTYTTYFA 393

Query: 407 EALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLK 466
           EALI+EAE DK++VAIHAAMGGGTGLN+F +RFPTRCFDVGIAEQHAVTFAAGLACEGLK
Sbjct: 394 EALISEAEADKNIVAIHAAMGGGTGLNMFSKRFPTRCFDVGIAEQHAVTFAAGLACEGLK 453

Query: 467 PFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNM 526
           PFCAIYSSF+QRAYDQV+HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT++ACLPNM
Sbjct: 454 PFCAIYSSFLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYLACLPNM 513

Query: 527 VVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG 586
           VVMAPS+E ELFHMVATAAAIDDRPSCFR+PRGNG+G +LPPGNKG+PLE+GKGRIL+EG
Sbjct: 514 VVMAPSNETELFHMVATAAAIDDRPSCFRFPRGNGVGAQLPPGNKGVPLEIGKGRILVEG 573

Query: 587 ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 646
           +RVALLGYGT VQ+CLAASALLE   L +TVADARFCKPLD  LIRSLA+ HEVLITVEE
Sbjct: 574 DRVALLGYGTVVQNCLAASALLEEQDLSVTVADARFCKPLDRDLIRSLAREHEVLITVEE 633

Query: 647 GSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           G+IGGFGSHV  FLA DG LDG +KWRP+VLPD YI+HG+P+DQ+ +AGLT SHIAA+V 
Sbjct: 634 GTIGGFGSHVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPSDQMIEAGLTASHIAASVL 693

Query: 707 NILGQTREALEIMS 720
           N+LG+TREAL++MS
Sbjct: 694 NVLGRTREALQVMS 707


>gi|302805853|ref|XP_002984677.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
 gi|300147659|gb|EFJ14322.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
          Length = 636

 Score = 1157 bits (2993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/636 (86%), Positives = 595/636 (93%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MKNLS ++L+QLADELR+D+IF VSKTGGHLG+SLGVIELTVALH+VFN P+D+ILWDVG
Sbjct: 1   MKNLSTKDLRQLADELRSDIIFTVSKTGGHLGASLGVIELTVALHHVFNMPEDKILWDVG 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQ YPHKILTGRR +MHT+RQT+GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL
Sbjct: 61  HQAYPHKILTGRRSRMHTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDL 120

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVG 265
            G KN+V++VIGDGAMTAGQAYEAMNNAGYLDS+MIVILNDNKQVSLPTATLDGP PPVG
Sbjct: 121 MGNKNHVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVG 180

Query: 266 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 325
           ALSSALS+LQS+RPLRELREVAKGVTKQ+GGPMHELAAKVDEYARGMISGSGSTLFEELG
Sbjct: 181 ALSSALSKLQSSRPLRELREVAKGVTKQLGGPMHELAAKVDEYARGMISGSGSTLFEELG 240

Query: 326 LYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFD 385
           LYYIGPVDGH+++DLV IL+EVKNT+TTGPVLIH+VTEKGRGYPYAE+A+DKYHGV KFD
Sbjct: 241 LYYIGPVDGHSIEDLVTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFD 300

Query: 386 PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFD 445
           PATGKQFK    TQ+YTTYFAEALIAEAEVD  ++AIHAAMGGGTGLN+F +RFP RCFD
Sbjct: 301 PATGKQFKGKTATQAYTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQKRFPDRCFD 360

Query: 446 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 505
           VGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVG
Sbjct: 361 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 420

Query: 506 ADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE 565
           ADGPTHCG+FDVT+MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV 
Sbjct: 421 ADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVV 480

Query: 566 LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 625
           LPPGNKGIPLEVGKGRIL+EG +VALLGYGT VQSCLAA ALL S GL  TVADARFCKP
Sbjct: 481 LPPGNKGIPLEVGKGRILVEGSKVALLGYGTMVQSCLAAQALLASCGLPATVADARFCKP 540

Query: 626 LDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 685
           LD  LIR LA+ HEVLITVEEGSIGGFGSHV QF+A DGLLDGT+KWRPLVLPDRYIDHG
Sbjct: 541 LDRDLIRQLAREHEVLITVEEGSIGGFGSHVAQFMALDGLLDGTLKWRPLVLPDRYIDHG 600

Query: 686 SPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           SP DQ+ +AGLT +HIAAT  +I+G+TR+ALEIMS 
Sbjct: 601 SPNDQMTEAGLTAAHIAATALDIMGRTRDALEIMSL 636


>gi|302793999|ref|XP_002978764.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
 gi|300153573|gb|EFJ20211.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
          Length = 636

 Score = 1156 bits (2991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/636 (86%), Positives = 594/636 (93%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MKNLS ++L+QLADELR+D+IF VSKTGGHLG+SLGVIELTVALH+VFN P+D+ILWDVG
Sbjct: 1   MKNLSTKDLRQLADELRSDIIFTVSKTGGHLGASLGVIELTVALHHVFNMPEDKILWDVG 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQ YPHKILTGRR +MHTMRQT+GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL
Sbjct: 61  HQAYPHKILTGRRSRMHTMRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDL 120

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVG 265
            G KN+V++VIGDGAMTAGQAYEAMNNAGYLDS+MIVILNDNKQVSLPTATLDGP PPVG
Sbjct: 121 MGNKNHVISVIGDGAMTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVG 180

Query: 266 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 325
           ALSSALS+LQS+RPLRELREVAKGVTKQ+GG MHELAAKVDEYARGMISGSGSTLFEELG
Sbjct: 181 ALSSALSKLQSSRPLRELREVAKGVTKQLGGQMHELAAKVDEYARGMISGSGSTLFEELG 240

Query: 326 LYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFD 385
           LYYIGPVDGH+++DLV IL+EVKNT+TTGPVLIH+VTEKGRGYPYAE+A+DKYHGV KFD
Sbjct: 241 LYYIGPVDGHSIEDLVTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFD 300

Query: 386 PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFD 445
           PATGKQFK    TQ+YTTYFAEALIAEAEVD  ++AIHAAMGGGTGLN+F +RFP RCFD
Sbjct: 301 PATGKQFKGKTATQAYTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQKRFPDRCFD 360

Query: 446 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 505
           VGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVG
Sbjct: 361 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 420

Query: 506 ADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE 565
           ADGPTHCG+FDVT+MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV 
Sbjct: 421 ADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVV 480

Query: 566 LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 625
           LPPGNKGIPLEVGKGRIL+EG +VALLGYGT VQSCLAA ALL S GL  TVADARFCKP
Sbjct: 481 LPPGNKGIPLEVGKGRILVEGSKVALLGYGTMVQSCLAAQALLASCGLPATVADARFCKP 540

Query: 626 LDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 685
           LD  LIR LA+ HEVLITVEEGSIGGFGSHV QF+A DGLLDGT+KWRPLVLPDRYIDHG
Sbjct: 541 LDRDLIRQLAREHEVLITVEEGSIGGFGSHVAQFMALDGLLDGTLKWRPLVLPDRYIDHG 600

Query: 686 SPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           SP DQ+ +AGLT +HIAAT  +I+G+TR+ALEIMS 
Sbjct: 601 SPNDQMTEAGLTAAHIAATALDIMGRTRDALEIMSL 636


>gi|168038235|ref|XP_001771607.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677163|gb|EDQ63637.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 679

 Score = 1152 bits (2979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/660 (83%), Positives = 604/660 (91%), Gaps = 2/660 (0%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           + GEY +++PPTPLLDTINYPIHMKNL++RELKQLADE+RA+ I  VSKTGGHLGSSLGV
Sbjct: 20  QAGEYPAEKPPTPLLDTINYPIHMKNLTVRELKQLADEVRAETIHTVSKTGGHLGSSLGV 79

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           +ELTVALH+VFN P+D+ LWDVGHQ YPHKILTGRRD+MHT+RQTDGLSGF KR+ESEYD
Sbjct: 80  VELTVALHHVFNCPEDKFLWDVGHQAYPHKILTGRRDRMHTLRQTDGLSGFVKRAESEYD 139

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
            FG GHSSTSISAGLGMAVGRDLKG+KNNV+AVIGDGAMTAGQAYEAMNNAGYLD +MIV
Sbjct: 140 AFGAGHSSTSISAGLGMAVGRDLKGKKNNVIAVIGDGAMTAGQAYEAMNNAGYLDCNMIV 199

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDNKQVSLPTATLDGP PPVGALSSALSRLQS+RPLRELREVAKGVTKQ+GGP H LA
Sbjct: 200 ILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPLRELREVAKGVTKQLGGPAHVLA 259

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           +KVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDLV IL EVKNT TTGPVLIH+VT
Sbjct: 260 SKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDLVTILREVKNTSTTGPVLIHLVT 319

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           EKGRGYPYAE+AADKYHGV KFDPATGKQ K  A TQ+YTTYFAEALIAEAEVDKD++ I
Sbjct: 320 EKGRGYPYAERAADKYHGVVKFDPATGKQNKVKAATQAYTTYFAEALIAEAEVDKDIIGI 379

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
           HAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGLACEGLKPFC+IYSSF+QR YDQ
Sbjct: 380 HAAMGGGTGMNMFAKRFPERCFDVGIAEQHAVTFAAGLACEGLKPFCSIYSSFLQRGYDQ 439

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAP+DEAELFHMVA
Sbjct: 440 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELFHMVA 499

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCL 602
           TAA IDDRPSCFRYPRGNGIG +LP  NKGIP+E+GKGRIL+EG  VALLGYGT VQ+CL
Sbjct: 500 TAAQIDDRPSCFRYPRGNGIGAQLPENNKGIPVEIGKGRILLEGTEVALLGYGTMVQNCL 559

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
           AA ALL   G+  TVADARFCKPLD  LIR LAK+H+V+ITVEEGSIGGFGSHV QF+A 
Sbjct: 560 AARALLADLGVAATVADARFCKPLDRDLIRQLAKNHQVIITVEEGSIGGFGSHVAQFMAL 619

Query: 663 DGLLDGTVKWR--PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           DGLLDG +K    PLVLPDRYI+HG+P DQ A+AGLT  HIAAT  N+LG+TREAL++M+
Sbjct: 620 DGLLDGKLKASLLPLVLPDRYIEHGAPKDQYAEAGLTAGHIAATALNVLGKTREALQVMT 679


>gi|168015770|ref|XP_001760423.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688437|gb|EDQ74814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 736

 Score = 1151 bits (2977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/697 (78%), Positives = 612/697 (87%), Gaps = 3/697 (0%)

Query: 28  SHFFGAAL--FSHFSHKLDNHQIQLKKRPNGVCASLSER-GEYHSQRPPTPLLDTINYPI 84
           S FFG      S  S  +    + ++++   V  +++E   EY S++P TPLLDTINYPI
Sbjct: 36  SSFFGTQKMNLSKESQSVSIEYLGVQEKSRVVATAVTETDAEYPSEKPLTPLLDTINYPI 95

Query: 85  HMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDV 144
           HMKNL++RELKQL DELRA+ I  VSKTGGHLGSSLGV+ELTVALH+VFN P+D+ILWDV
Sbjct: 96  HMKNLTVRELKQLVDELRAETIHTVSKTGGHLGSSLGVVELTVALHHVFNTPEDKILWDV 155

Query: 145 GHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRD 204
           GHQTYPHKILTGRR KM T+RQT G+SGF KR+ESEYD FG GHSSTSISAGLGMAVGRD
Sbjct: 156 GHQTYPHKILTGRRGKMRTLRQTAGISGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRD 215

Query: 205 LKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPV 264
           LKGR NNV+AVIGDGAMTAGQAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPV
Sbjct: 216 LKGRTNNVIAVIGDGAMTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPV 275

Query: 265 GALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEEL 324
           GALSSALS+LQS+RPLRELREVAKGVTKQ+GG  H LAAKVDEYARGMISGSGSTLFEEL
Sbjct: 276 GALSSALSKLQSSRPLRELREVAKGVTKQLGGSAHVLAAKVDEYARGMISGSGSTLFEEL 335

Query: 325 GLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKF 384
           GLYYIGPV+GHN++DLV IL EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KF
Sbjct: 336 GLYYIGPVNGHNLEDLVTILREVKNTATTGPVLIHLVTEKGRGYPYAERAADKYHGVVKF 395

Query: 385 DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCF 444
           DPATGKQ K    TQ+YTTYFAEALIAEAE+DK +V IHAAMGGGTG+N+F +RFP RCF
Sbjct: 396 DPATGKQHKVKTATQAYTTYFAEALIAEAELDKSIVGIHAAMGGGTGMNMFAKRFPERCF 455

Query: 445 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLV 504
           DVGIAEQHAVTFAAGLACEGL+PFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLV
Sbjct: 456 DVGIAEQHAVTFAAGLACEGLRPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLV 515

Query: 505 GADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV 564
           GADGPTHCG+FDVT+MACLPNMVVMAP+DEAELF+MVATAA IDD PSCFRYPRGNGIGV
Sbjct: 516 GADGPTHCGAFDVTYMACLPNMVVMAPADEAELFNMVATAAVIDDSPSCFRYPRGNGIGV 575

Query: 565 ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 624
           +LP  NKG P+EVGKGRIL+EG  VALLGYGT VQ+CLAA +LL   G+  TVAD RFCK
Sbjct: 576 QLPANNKGTPIEVGKGRILLEGTDVALLGYGTMVQNCLAAHSLLADVGISATVADGRFCK 635

Query: 625 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 684
           PLD  LIR LA++H+VLITVEEG++GGFGSHV QF+A DGLLDG +KWRPLVLPDRYI+H
Sbjct: 636 PLDRGLIRQLAENHQVLITVEEGAVGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIEH 695

Query: 685 GSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           G+P DQ A+AGLT  HIAAT  N+LG+TR+AL+IMS 
Sbjct: 696 GAPNDQFAEAGLTAGHIAATALNVLGKTRQALQIMSL 732


>gi|302815172|ref|XP_002989268.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
 gi|300143011|gb|EFJ09706.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
          Length = 728

 Score = 1150 bits (2975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/662 (81%), Positives = 604/662 (91%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           ++LSE  EY S++PPTPLLDTINYP+HMKNL + +L+QLA+ELR + IF+VSKTGGHLGS
Sbjct: 66  SALSEAPEYFSEKPPTPLLDTINYPLHMKNLGVSDLEQLAEELRNETIFSVSKTGGHLGS 125

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+ELTVALH+VFN P+D+ILWDVGHQTYPHKILTGRR +MHT+RQTDG+ GFTKRSE
Sbjct: 126 SLGVVELTVALHHVFNTPEDKILWDVGHQTYPHKILTGRRSRMHTLRQTDGICGFTKRSE 185

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYD FG GHSST+ISAGLGMAV RDL+G+KNNV+AVIGDGAMTAGQAYEAMNNAGYLD+
Sbjct: 186 SEYDPFGAGHSSTTISAGLGMAVARDLQGKKNNVIAVIGDGAMTAGQAYEAMNNAGYLDT 245

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           ++IVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS++ LRELREVAKGVTKQIGG M
Sbjct: 246 NLIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSKKLRELREVAKGVTKQIGGHM 305

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           H+LAAKVDEYARGMISG+G+T FEELGLYYIGPVDGH +DDL+AIL+EVK  +T GPVLI
Sbjct: 306 HQLAAKVDEYARGMISGTGATFFEELGLYYIGPVDGHRIDDLIAILKEVKAAETIGPVLI 365

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVTEKGRGYPYAE+AADKYHGV KFDPATGKQ K    T++YTTYFAE+L+AEA+ D+ 
Sbjct: 366 HVVTEKGRGYPYAERAADKYHGVVKFDPATGKQQKGKPATKAYTTYFAESLVAEAQKDES 425

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTGLN+F ++FP RCFDVGIAEQHAVTFAAGLA EG+KPFCAIYSSF+QR
Sbjct: 426 IVAIHAAMGGGTGLNIFQKQFPERCFDVGIAEQHAVTFAAGLASEGIKPFCAIYSSFLQR 485

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
            YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAP+DEAEL 
Sbjct: 486 GYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELM 545

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HM+ATAAAIDDRPSCFRYPRGNGIG  LP GNKG P+E+GKGRIL+EG RVALLGYGT V
Sbjct: 546 HMIATAAAIDDRPSCFRYPRGNGIGALLPAGNKGTPVEIGKGRILVEGSRVALLGYGTMV 605

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+CL A  LL+ +GL +TVADARFCKPLD  L+R LAK HEVLITVEEGSIGGFGSHVV 
Sbjct: 606 QNCLGARNLLQEHGLSVTVADARFCKPLDQQLVRQLAKEHEVLITVEEGSIGGFGSHVVH 665

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           FLA DGLLDG +KWRP+VLPDRYIDHGSP DQ+A+AGLT SHIAAT  ++LG+TREAL +
Sbjct: 666 FLALDGLLDGKLKWRPIVLPDRYIDHGSPQDQMAEAGLTSSHIAATALSMLGKTREALHL 725

Query: 719 MS 720
            S
Sbjct: 726 KS 727


>gi|7446974|pir||D71420 hypothetical protein - Arabidopsis thaliana
          Length = 703

 Score = 1140 bits (2949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/745 (76%), Positives = 621/745 (83%), Gaps = 72/745 (9%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MA SAF+FP+Y+   T  G    S + S        SH              R   VCAS
Sbjct: 1   MASSAFAFPSYI--ITKGGLSTDSYLPSPCLKPNNNSH------------SNRRAKVCAS 46

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           L+E+GEY+S RPPTPLLDTINYPIHMKNLS++ELKQL+DELR+DVIFNVSKTGGHLGSSL
Sbjct: 47  LAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL 106

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM TMRQT+GLSGFTKR ESE
Sbjct: 107 GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE 166

Query: 181 YDCFGTGHSSTSISAGL--------GMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNN 232
           +DCFGTGHSST+ISAGL        GMAVGRDLKG+ NNVVAVIGDGAMTAGQAYEAMNN
Sbjct: 167 HDCFGTGHSSTTISAGLGNTINHSFGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNN 226

Query: 233 AGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK---- 288
           AGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  LRELREVAK    
Sbjct: 227 AGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKASLL 286

Query: 289 ------GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 342
                 G+TKQIGGPMH+LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVA
Sbjct: 287 HFFSRMGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVA 346

Query: 343 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHG---VAKFDPATGKQFKSSARTQ 399
           IL+EVK+T+TTGPVLIHVVTEKGRGYPYAE+A DKYHG   V KFDPATG+QFK++ +TQ
Sbjct: 347 ILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGKTSVVKFDPATGRQFKTTNKTQ 406

Query: 400 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 459
           SYTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHA      
Sbjct: 407 SYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHA------ 460

Query: 460 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 519
                                  VVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTF
Sbjct: 461 -----------------------VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTF 497

Query: 520 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE--- 576
           MACLPNM+VMAPSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E   
Sbjct: 498 MACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEKIS 557

Query: 577 -----VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALI 631
                +GKGRIL EGERVALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALI
Sbjct: 558 LGVFQIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALI 617

Query: 632 RSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 691
           RSLAKSHEVLITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQL
Sbjct: 618 RSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQL 677

Query: 692 AQAGLTPSHIAATVFNILGQTREAL 716
           A+AGL PSHIAAT  N++G  REAL
Sbjct: 678 AEAGLMPSHIAATALNLIGAPREAL 702


>gi|2612941|gb|AAB88295.1| CLA1 transketolase-like protein [Oryza sativa]
          Length = 594

 Score = 1107 bits (2862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/594 (88%), Positives = 563/594 (94%)

Query: 81  NYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRI 140
           NYPIHMKNLS++EL+QLADELR+DVIF+VSKTGGHLGSSLGV+ELTVALHYVFN P+D+I
Sbjct: 1   NYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVELTVALHYVFNTPQDKI 60

Query: 141 LWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMA 200
           LWDVGHQ+YPHKILTGRRDKM TMRQT+GLSGFTKRSESEYD FGTGHSST+ISA LGMA
Sbjct: 61  LWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMA 120

Query: 201 VGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP 260
           VGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP
Sbjct: 121 VGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP 180

Query: 261 IPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL 320
            PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGSTL
Sbjct: 181 APPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTL 240

Query: 321 FEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHG 380
           FEELGLYYIGPVDGHN+DDL+ IL EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHG
Sbjct: 241 FEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHG 300

Query: 381 VAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFP 440
           VAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  VVAIHAAMGGGTGLN FLRRFP
Sbjct: 301 VAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFP 360

Query: 441 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 500
            RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDR
Sbjct: 361 NRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDR 420

Query: 501 AGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGN 560
           AGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGN
Sbjct: 421 AGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGN 480

Query: 561 GIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADA 620
           GIGV LPP  KG+PLEVGKGR+L+EGERVALLGYG+AVQ CLAA++L+E +GL++TVADA
Sbjct: 481 GIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADA 540

Query: 621 RFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
           RFCKPLD  LIR LA SHEVL+TVEEGSIGGFGSHV QF+A DGLLDG +KWRP
Sbjct: 541 RFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRP 594


>gi|302764446|ref|XP_002965644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
           moellendorffii]
 gi|300166458|gb|EFJ33064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
           moellendorffii]
          Length = 636

 Score = 1102 bits (2849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/635 (81%), Positives = 578/635 (91%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MKNL + +L+QLA+ELR + IF+VSKTGGHLGSSLGV+ELTVALH+VFN P+D+ILWDVG
Sbjct: 1   MKNLGVSDLEQLAEELRNETIFSVSKTGGHLGSSLGVVELTVALHHVFNTPEDKILWDVG 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQTYPHKILTGRR +MHT+RQTDG+ GFTKRSESEYD FG GHSST+ISAGLGMAV RDL
Sbjct: 61  HQTYPHKILTGRRSRMHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGLGMAVARDL 120

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVG 265
           +G+KNNV+AVIGDGAMTAGQAYEAMNNAGYLD++MIVILNDNKQVSLPTATLDGP PPVG
Sbjct: 121 QGKKNNVIAVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPAPPVG 180

Query: 266 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 325
           ALSSALSRLQS++ LRELREVAKGVTKQIGG MH+LAAKVDEYARGMISG+G+T FEELG
Sbjct: 181 ALSSALSRLQSSKKLRELREVAKGVTKQIGGHMHQLAAKVDEYARGMISGTGATFFEELG 240

Query: 326 LYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFD 385
           LYYIGPVDGH +DDL+ IL+EVK  +T GPVLIHVVTEKG GYPYAE+AADKYHGV KFD
Sbjct: 241 LYYIGPVDGHRIDDLITILKEVKAAETIGPVLIHVVTEKGHGYPYAERAADKYHGVVKFD 300

Query: 386 PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFD 445
           PATGKQ K    T++YTTYFAE+L+AEA+ D+ +VAIHAAMGGGTGLN+F ++FP RCFD
Sbjct: 301 PATGKQQKGKPATKAYTTYFAESLVAEAQKDESIVAIHAAMGGGTGLNIFQKQFPERCFD 360

Query: 446 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 505
           VGIAEQHAVTFAAGLA EG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVG
Sbjct: 361 VGIAEQHAVTFAAGLASEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVG 420

Query: 506 ADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE 565
           ADGPTHCG+FDVT+MACLPNMVVMAP+DEAEL HM+ATAAAIDDRPSCFRYPRGNGIG  
Sbjct: 421 ADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMIATAAAIDDRPSCFRYPRGNGIGAL 480

Query: 566 LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 625
           LP GNKG P+E+GKGRIL+EG RVALLGYGT VQ+CL A  LL+ +GL +TVADARFCKP
Sbjct: 481 LPAGNKGTPVEIGKGRILVEGSRVALLGYGTMVQNCLGARNLLQEHGLSVTVADARFCKP 540

Query: 626 LDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 685
           LD  L+R LAK HEVLITVEEGSIGGFGSHVV FLA DGLLDG +KWRP+VLPDRYIDHG
Sbjct: 541 LDQQLVRQLAKEHEVLITVEEGSIGGFGSHVVHFLALDGLLDGKLKWRPIVLPDRYIDHG 600

Query: 686 SPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           SP DQ+A+AGLT SHIAAT  ++LG+TREAL + S
Sbjct: 601 SPQDQMAEAGLTSSHIAATALSMLGKTREALHLKS 635


>gi|297835124|ref|XP_002885444.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331284|gb|EFH61703.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 655

 Score = 1083 bits (2800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/716 (73%), Positives = 593/716 (82%), Gaps = 64/716 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+ +  +    K + ++S                        + + V A+
Sbjct: 1   MALSVFAFPSYIYRNPSIKYCKPTSMSS-----------------------TKTSKVRAT 37

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           ++E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 38  IAEKGEYYSSRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 97

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P+D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+T R ESE
Sbjct: 98  GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTNRRESE 157

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST+ISAGLGMAVGRDLKG  N+VVAVIGDGAMTAGQAYEAMNNAGYLDSDM
Sbjct: 158 HDSFGTGHSSTTISAGLGMAVGRDLKGMNNSVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 217

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP PPVGALS ALS                            
Sbjct: 218 IVILNDNKQVSLPTANLDGPTPPVGALSCALS---------------------------- 249

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                        SG+GSTLFEELG +Y+GPVDGHN+DDLV+ILE+VK+TK  GPVLIHV
Sbjct: 250 -------------SGTGSTLFEELGFHYVGPVDGHNIDDLVSILEKVKSTKPIGPVLIHV 296

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDPATGKQFK+ ++TQSYT+ F EAL AEAE DK++V
Sbjct: 297 VTEKGRGYPYAERADDKYHGVLKFDPATGKQFKNISKTQSYTSCFVEALTAEAEADKNIV 356

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 357 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 416

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+M
Sbjct: 417 DQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNM 476

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++GKGRIL EGERVALLGYG+AVQ 
Sbjct: 477 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGKGRILREGERVALLGYGSAVQR 536

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSL KSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 537 CLEAASMLSERGLKITVADARFCKPLDVALIRSLVKSHEVLITVEEGSIGGFGSHVVQFL 596

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           A DGLLDG +KWRP+VLPDRYI+HGSP DQLA+AGLT SHIAAT  N++G  REAL
Sbjct: 597 ALDGLLDGKLKWRPMVLPDRYIEHGSPMDQLAEAGLTASHIAATALNLMGTPREAL 652


>gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphate synthase [Morinda citrifolia]
          Length = 722

 Score = 1075 bits (2780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/725 (71%), Positives = 601/725 (82%), Gaps = 11/725 (1%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFF-GAALFSHFSHKLDNHQIQLKKRPNGVCA 59
           MAL+AF+FP  +S+   S   K S + S++  G  L   F  +  N+Q+    R   V A
Sbjct: 1   MALNAFAFPGNLSRVLVSNSIKQSLLHSNWLCGTDLQLQF--ECQNNQVMKNSRR--VRA 56

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLS------IRELKQLADELRADVIFNVSKTG 113
           SLSERGEY+SQRPPTPLLDTINYPIHMKNLS      I+ELKQLADELR+D+IFNVSKTG
Sbjct: 57  SLSERGEYYSQRPPTPLLDTINYPIHMKNLSTKSHYLIQELKQLADELRSDIIFNVSKTG 116

Query: 114 GHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGF 173
           GHLGSSLGV+ELTVALHY FN P+D+I+WDVGHQ YPHKILTGRR KM T+RQT G++GF
Sbjct: 117 GHLGSSLGVVELTVALHYAFNCPQDKIVWDVGHQAYPHKILTGRRSKMQTIRQTYGIAGF 176

Query: 174 TKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNA 233
            KR ES YD FG GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGAMTAGQAYEAMNNA
Sbjct: 177 PKRDESVYDAFGAGHSSTSISAGLGMAVGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNA 236

Query: 234 GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ 293
           G+LD+++IVILNDNKQVSLPT TLDGP  PVGALSSAL++LQ++   R+LRE AK +TKQ
Sbjct: 237 GFLDANLIVILNDNKQVSLPTGTLDGPATPVGALSSALTKLQASPKFRQLREAAKSITKQ 296

Query: 294 IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT 353
           IG   HE+AAKVDEYARG+IS SGST FEELGLYYIGPVDGHN++DL+ I ++VK     
Sbjct: 297 IGPQAHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNIEDLITIFDKVKTMPAP 356

Query: 354 GPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEA 413
           GPVLIH+VTEKG+GYP AE AAD+ HGV KFD A+GKQFKS + T SYT YFAEALI EA
Sbjct: 357 GPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVASGKQFKSKSPTLSYTQYFAEALIKEA 416

Query: 414 EVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS 473
           E+D  +VAIHAAMGGGTGLN F + FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS
Sbjct: 417 EIDNKIVAIHAAMGGGTGLNYFQKIFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYS 476

Query: 474 SFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSD 533
           SF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACL NM+VMAP+D
Sbjct: 477 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLSNMIVMAPAD 536

Query: 534 EAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLG 593
           EAEL HMVATAA IDDRP CFR+PRGNGIG +LPP NKG  + +GKGRIL EG RVA++G
Sbjct: 537 EAELMHMVATAATIDDRPCCFRFPRGNGIGAKLPPDNKGNLIGIGKGRILTEGSRVAIIG 596

Query: 594 YGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFG 653
           YG  VQ CL A+ +L+ + ++ T+ADARFCKPLD  LI+ LAK HE+LITVEEGSIGGFG
Sbjct: 597 YGAIVQQCLGAAEMLKLHNIKPTIADARFCKPLDGELIKRLAKEHEILITVEEGSIGGFG 656

Query: 654 SHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           SHV  FL+  GLLDG +K R +VLPDRYIDHGSPADQ+ QAGL+  HI ATV ++LG+ +
Sbjct: 657 SHVSHFLSLSGLLDGPIKLRSMVLPDRYIDHGSPADQIEQAGLSSRHICATVLSLLGKPK 716

Query: 714 EALEI 718
           EAL++
Sbjct: 717 EALQL 721


>gi|215478266|gb|ACJ67020.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Pinus taeda]
          Length = 740

 Score = 1070 bits (2768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/658 (75%), Positives = 585/658 (88%), Gaps = 2/658 (0%)

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           ++ +  + +++PPTPLLDT+NYP+H+KNLSI++L+QLA E+RA+++F V+KTGGHL ++L
Sbjct: 79  IASKSGFPAEKPPTPLLDTVNYPVHLKNLSIQDLEQLATEIRAELVFGVAKTGGHLSANL 138

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV++LTVALHYVFN P D+I+WDVGHQ+YP+KILTGRR KM T+RQT G++GF +R ESE
Sbjct: 139 GVVDLTVALHYVFNTPHDKIVWDVGHQSYPYKILTGRRSKMSTLRQTSGIAGFPRRVESE 198

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FG GHSSTSISA +GMAVGRDL G+ N+V+ VIGDGAMTAGQAYEAMNNAG+LDS+M
Sbjct: 199 HDAFGAGHSSTSISAAVGMAVGRDLLGKHNHVIGVIGDGAMTAGQAYEAMNNAGFLDSNM 258

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           I+ILNDNKQVSLPTA LDGPIPPVGALSSALS+LQS++PLRELREVAKGVTKQ+G PMHE
Sbjct: 259 IIILNDNKQVSLPTANLDGPIPPVGALSSALSKLQSSKPLRELREVAKGVTKQLGAPMHE 318

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           LAAKVDEYARGMISGS S+LF+ELGLYYIGPVDGHN++D+V ILE++K+   TGPVLIH+
Sbjct: 319 LAAKVDEYARGMISGSRSSLFDELGLYYIGPVDGHNIEDMVTILEKIKSMPATGPVLIHL 378

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKG+GYP AE+AADK HGV KFDP TGKQFKS +   SYT YFAEALIAEAEVD  +V
Sbjct: 379 VTEKGKGYPPAEEAADKLHGVVKFDPVTGKQFKSKSSVLSYTQYFAEALIAEAEVDSKIV 438

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QR Y
Sbjct: 439 AIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGY 498

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +MACLPNM+VMAPSDE EL H+
Sbjct: 499 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMIVMAPSDEVELMHI 558

Query: 541 VATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           VATAAAIDDRPSCFR+PRGNG+G+  LP  NKG+PLE+GKGRIL+EG RVA+LG+GT +Q
Sbjct: 559 VATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGVPLEIGKGRILVEGTRVAILGFGTIIQ 618

Query: 600 SCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           +CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK HE+L+TVEEGSIGGFGSHV  
Sbjct: 619 NCLAAGKILNEQAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHVSH 678

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGLTP HIAAT+ ++LG+  +AL
Sbjct: 679 FLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLTPEHIAATIMSLLGKPHDAL 736


>gi|153799538|gb|ABS50520.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
          Length = 746

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/648 (76%), Positives = 568/648 (87%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           ++PPTPLLDTINYPIHMKN +I+EL+QLA ELR ++IF+V++TGGHL +SLGV++LTVAL
Sbjct: 89  EKPPTPLLDTINYPIHMKNFNIKELRQLAKELREEIIFSVAETGGHLSASLGVVDLTVAL 148

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HYVFN P D+++WDVGHQ+YPHKILTGRR KM TMRQT GL+GF +R ESE+D FG GHS
Sbjct: 149 HYVFNTPHDKVVWDVGHQSYPHKILTGRRSKMGTMRQTSGLAGFPRRVESEHDAFGVGHS 208

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA +GMAVGRDL G+ N+V+AVIGDGAMTAGQAYEA+NNAG+LDS+MI+ILNDNKQ
Sbjct: 209 STSISAAIGMAVGRDLLGKHNHVIAVIGDGAMTAGQAYEALNNAGFLDSNMIIILNDNKQ 268

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           VSLPTAT+DGP PPVGALSSAL RLQ+++  R+LREVAK +T QIGG  H+LAAKVD+YA
Sbjct: 269 VSLPTATIDGPAPPVGALSSALCRLQASKKFRQLREVAKDITHQIGGATHQLAAKVDDYA 328

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RGM S  GS LFEELGLYYIGPVDGHN+ DLVAILE VK+  T GPVLIHVVTEKG+GYP
Sbjct: 329 RGMFSAPGSALFEELGLYYIGPVDGHNIQDLVAILENVKSMPTPGPVLIHVVTEKGKGYP 388

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AEKAADK HGV KFDPATGKQFK  + T SYT YFAE L+AEAE D+ +VAIHAAMGGG
Sbjct: 389 PAEKAADKLHGVVKFDPATGKQFKPKSSTLSYTQYFAEGLMAEAERDEKIVAIHAAMGGG 448

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDL
Sbjct: 449 TGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDL 508

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL HMVAT+AAIDD
Sbjct: 509 QKLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATSAAIDD 568

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPSCFR+PRGNG+GV LPP NKG PL++GKGRIL EG R+A+LGYG+ VQ+CLAA  +L 
Sbjct: 569 RPSCFRFPRGNGVGVPLPPNNKGTPLKIGKGRILAEGTRIAILGYGSIVQNCLAAREMLA 628

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
             G+ +TVADARFCKPLD  LIR L K HE+L+TVEEGSIGGFGSHV  FLA  GL DG 
Sbjct: 629 QQGISVTVADARFCKPLDGDLIRRLVKEHEILVTVEEGSIGGFGSHVSHFLALHGLFDGK 688

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           +KWRP+VLPDRYIDHGSP DQ+ +AGL+  HIAATV +++G+ + AL+
Sbjct: 689 LKWRPMVLPDRYIDHGSPKDQIEEAGLSSRHIAATVMSLIGKPQNALQ 736


>gi|40849969|gb|AAR95699.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Ginkgo biloba]
          Length = 738

 Score = 1060 bits (2740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/653 (75%), Positives = 578/653 (88%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++  ++P TPLLDTINYPIHMKNLS+ +L+QLA ELRA+++F VSKTGGHLG+SLGV++L
Sbjct: 84  DFSGEKPATPLLDTINYPIHMKNLSVEDLRQLASELRAEIVFGVSKTGGHLGASLGVVDL 143

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALH+VFN P+DRI+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR ESE+D FG
Sbjct: 144 TVALHHVFNTPEDRIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESEHDAFG 203

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G++N+VVAVIGDGAMTAGQAYEAMNN+GYLDS+MI+ILN
Sbjct: 204 AGHSSTSISAGLGMAVGRDLLGKRNHVVAVIGDGAMTAGQAYEAMNNSGYLDSNMIIILN 263

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDG  PPVGALSSAL++ QS++ LR+LRE AK +TKQIGG  HE+A+KV
Sbjct: 264 DNKQVSLPTATLDGAAPPVGALSSALTKPQSSKKLRKLREAAKSLTKQIGGQTHEIASKV 323

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS +GS+LFEELGLYYIGPVDGHN++D+V IL++VK+    GPVLIH+VT+KG
Sbjct: 324 DEYARGMISPAGSSLFEELGLYYIGPVDGHNMEDMVTILDKVKSMPAPGPVLIHLVTDKG 383

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AEKAADK HGV  FDPATGKQFKS + T SYT YFA+ALIAEAE D  +VAIHAA
Sbjct: 384 KGYPPAEKAADKLHGVVNFDPATGKQFKSKSSTLSYTQYFADALIAEAEEDSKIVAIHAA 443

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAG+A EGLKPFCAIYS+F+QR YDQVVH
Sbjct: 444 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQVVH 503

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAPSDEAEL HM+ATAA
Sbjct: 504 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMIATAA 563

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNG+GV LPPGN+GIPLE+GKG IL EG RVA+LG G  VQ+C+AA 
Sbjct: 564 AIDDRPSCFRFPRGNGVGVPLPPGNRGIPLEIGKGCILQEGSRVAILGCGAIVQNCVAAR 623

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            LL+ + + +T+ADARFCKPLD  LIR LAK HE+L+TVEEG+IGGFGSHV  FLA +GL
Sbjct: 624 MLLKEHDISITIADARFCKPLDGDLIRQLAKEHEILVTVEEGAIGGFGSHVPHFLALNGL 683

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LDG +KWR +VLPDRYI+HGSP DQ+ +AGL+  HIA+TV + LG+  +AL++
Sbjct: 684 LDGNLKWRAMVLPDRYIEHGSPKDQIEEAGLSSRHIASTVMSPLGRPHDALQL 736


>gi|113473649|gb|ABI35993.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Catharanthus roseus]
          Length = 740

 Score = 1058 bits (2736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/689 (72%), Positives = 580/689 (84%), Gaps = 11/689 (1%)

Query: 33  AALFSHFSHKLDNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIR 92
           AA   H  +  +N+Q+ +KK+P            +   +P TP+LDTINYP HMKNLS++
Sbjct: 63  AAAHGHAHNVDENYQVLVKKQPL----------NFSGDKPFTPILDTINYPTHMKNLSLQ 112

Query: 93  ELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHK 152
           EL+QLADELR +++++V+KTGGHL SSLGV ELTVALH+VF  P D+I+WDVGHQTY HK
Sbjct: 113 ELQQLADELREEIVYSVAKTGGHLSSSLGVAELTVALHHVFETPNDKIIWDVGHQTYGHK 172

Query: 153 ILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNV 212
           ILTGRR KMHTMRQT GL+GF KR ES +D FG GHSSTSISAGLGMA+GRDL G+KN+V
Sbjct: 173 ILTGRRSKMHTMRQTCGLAGFPKRDESAHDAFGVGHSSTSISAGLGMAIGRDLLGKKNHV 232

Query: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALS 272
           + VIGDGAMTAGQAYEAMNNAGYLDS++I+ILNDNKQVSLPTAT+DGP PP GALS+AL+
Sbjct: 233 ITVIGDGAMTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATIDGPAPPTGALSNALT 292

Query: 273 RLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPV 332
           RLQS+R  R LRE AKGVTKQ+GG +HE+AAKVD Y RGM S   S LFE+LG+YYIGP+
Sbjct: 293 RLQSSRKFRLLREAAKGVTKQLGGQVHEMAAKVDTYMRGMNSQRAS-LFEDLGMYYIGPL 351

Query: 333 DGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF 392
           DGHN++DLV ILE+VK+   TGPVLIH++TEKG+GYP AE AADK HGV KF+P TGKQF
Sbjct: 352 DGHNMEDLVDILEKVKSVPATGPVLIHIITEKGKGYPPAEAAADKMHGVVKFEPMTGKQF 411

Query: 393 KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQH 452
           KS ++T+SYT YFAE+LI+EA  D  ++AIHAAMGGGTGLNLF + FP RCFDVGIAEQH
Sbjct: 412 KSRSKTKSYTNYFAESLISEAREDDKIIAIHAAMGGGTGLNLFQKHFPERCFDVGIAEQH 471

Query: 453 AVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC 512
           AVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQK+PVRFAMDRAGLVGADGPTHC
Sbjct: 472 AVTFAAGLASEGLKPFCAIYSSFLQRGYDQVVHDVDLQKIPVRFAMDRAGLVGADGPTHC 531

Query: 513 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG 572
           G+FD TFMACLPNMVVMAPSDE EL HMVATAAAIDDRPSCFRYPRGNGIG  LPP NKG
Sbjct: 532 GTFDTTFMACLPNMVVMAPSDETELMHMVATAAAIDDRPSCFRYPRGNGIGAILPPNNKG 591

Query: 573 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 632
            PL++GKGRIL+EG RVA+LGYG  VQ+CL A+ LLE NG+  TV DARFCKPLD  LIR
Sbjct: 592 APLQIGKGRILLEGTRVAILGYGAMVQNCLMAAQLLEINGISATVVDARFCKPLDGDLIR 651

Query: 633 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 692
            LA+ HEVLITVEEGSIGGFGSHV QFLA +GLLDG +KWR ++LPDRYIDHG+  DQ+ 
Sbjct: 652 KLAQQHEVLITVEEGSIGGFGSHVAQFLALNGLLDGNLKWRAMMLPDRYIDHGAQNDQIE 711

Query: 693 QAGLTPSHIAATVFNILGQTREALEIMSF 721
           +AGLTP HIA TVF++L + +  L+++ F
Sbjct: 712 EAGLTPKHIAGTVFSLLSKNKNTLQVLQF 740


>gi|224284202|gb|ACN39837.1| unknown [Picea sitchensis]
          Length = 740

 Score = 1054 bits (2726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/658 (73%), Positives = 584/658 (88%), Gaps = 2/658 (0%)

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           ++ + ++ +++PPTPLLDTINYP+H+KNLS+++L+QLA E+RA+++F VSKTGGHLG SL
Sbjct: 79  IAPKKDFSAEKPPTPLLDTINYPVHLKNLSVQDLEQLATEIRAELVFGVSKTGGHLGGSL 138

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV++LTVALH+VF++P+DRI+WDVGHQ+YPHKILTGRR KMHT+RQT GL+GF KR ES+
Sbjct: 139 GVVDLTVALHHVFDSPEDRIIWDVGHQSYPHKILTGRRSKMHTIRQTSGLAGFPKRDESK 198

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YD FG GHSSTSISAGLGMAVGRDL  + N+VVAVIGDGAMTAGQAYEAMNN+GYL+S++
Sbjct: 199 YDAFGAGHSSTSISAGLGMAVGRDLLRKSNHVVAVIGDGAMTAGQAYEAMNNSGYLESNL 258

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           I+ILNDNKQVSLPTATLDG  PPVGAL+ AL++LQS++ LR+LRE AKG+TKQIGG  HE
Sbjct: 259 IIILNDNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKLRKLREAAKGLTKQIGGQTHE 318

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           +A+KVD+Y RG+I+ + S+LFEELGLYYIGPVDGHN++D+V ILE++K+   +GPVLIH+
Sbjct: 319 MASKVDKYTRGIINPAASSLFEELGLYYIGPVDGHNIEDMVTILEKIKSMPDSGPVLIHL 378

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKG+GYP AE+AADK HGV KFDPATGKQFKS +   SYT YFAE+LIAEAEVD  +V
Sbjct: 379 VTEKGKGYPPAEEAADKLHGVVKFDPATGKQFKSKSSVLSYTQYFAESLIAEAEVDSKIV 438

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QR Y
Sbjct: 439 AIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGY 498

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +MACLPNMVVMAPSDE EL HM
Sbjct: 499 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMVVMAPSDEVELMHM 558

Query: 541 VATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           VATAAAIDDRPSCFR+PRGNG+G+  LP  NKG+PLE+G+GRIL+EG RVA+LG+GT +Q
Sbjct: 559 VATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGLPLEIGRGRILVEGTRVAILGFGTIIQ 618

Query: 600 SCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           +CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK HE+L+TVEEGSIGGFGSHV  
Sbjct: 619 NCLAAGKMLNEQAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHVSH 678

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGL+P HIAAT+ ++LG+  +AL
Sbjct: 679 FLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLSPKHIAATIMSLLGKPHDAL 736


>gi|183206723|gb|ACC54554.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 2 [Pinus
           densiflora]
          Length = 740

 Score = 1053 bits (2724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/677 (72%), Positives = 588/677 (86%), Gaps = 3/677 (0%)

Query: 42  KLDNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADEL 101
           KL N   +  K         S+ G + +++PPTPLLDT+NYP+H+KNLSI++L+QLA E+
Sbjct: 61  KLSNSDGEKGKNVKAAVEVASKSG-FPAEKPPTPLLDTVNYPVHLKNLSIQDLEQLATEI 119

Query: 102 RADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKM 161
           RA+++F V+KTGGHLG SLGV++LTVALH+VF++P+D+I+WDVGHQ+YPHKILTGRR KM
Sbjct: 120 RAELVFGVAKTGGHLGGSLGVVDLTVALHHVFDSPEDKIIWDVGHQSYPHKILTGRRSKM 179

Query: 162 HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 221
           HT+RQT GL+GF KR ES+YD FG GHSSTSISAGLGMAVGRDL  +KN+VVAVIGDGAM
Sbjct: 180 HTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLKKKNHVVAVIGDGAM 239

Query: 222 TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLR 281
           TAGQAYEAMNN+GYL+S++I+ILNDNKQVSLPTATLDG  PPVGAL+ AL++LQS++ LR
Sbjct: 240 TAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKLR 299

Query: 282 ELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLV 341
           +LRE AKG+TKQIGGP HE+A+KVD+YARG+IS +GS+LF+ELGLYYIGPVDGHN++D+V
Sbjct: 300 KLREAAKGLTKQIGGPTHEVASKVDKYARGLISPAGSSLFDELGLYYIGPVDGHNIEDMV 359

Query: 342 AILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSY 401
            ILE++K+   TGPVLIH+VTEKG+GYP AE+AADK HGV KFDP TGKQFKS +   SY
Sbjct: 360 TILEKIKSMPATGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPVTGKQFKSKSSVLSY 419

Query: 402 TTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLA 461
           T YFAEALIAEAEVD  +V IHAAMGGGTGLN F ++FP RC DVGIAEQHAVTFAAGLA
Sbjct: 420 TQYFAEALIAEAEVDSKIVGIHAAMGGGTGLNFFQKKFPERCLDVGIAEQHAVTFAAGLA 479

Query: 462 CEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMA 521
            EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +MA
Sbjct: 480 TEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMA 539

Query: 522 CLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGKG 580
           CLPNM+VMAPSDE EL H+VATAAAIDDRP CFR+PRGNG+G+  LP  NKG+PLE+GKG
Sbjct: 540 CLPNMIVMAPSDEVELMHIVATAAAIDDRPCCFRFPRGNGVGLSNLPLNNKGVPLEIGKG 599

Query: 581 RILIEGERVALLGYGTAVQSCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSHE 639
           RIL+EG RVA+LG+GT +Q+CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK HE
Sbjct: 600 RILVEGTRVAILGFGTIIQNCLAAGKILNEQAGISVTIADARFCKPLDGDLIKRLAKEHE 659

Query: 640 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 699
           +L+TVEEGSIGGFGSHV  FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGLTP 
Sbjct: 660 ILLTVEEGSIGGFGSHVSHFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLTPE 719

Query: 700 HIAATVFNILGQTREAL 716
           HIAAT+ ++LG+  +AL
Sbjct: 720 HIAATIMSLLGKPHDAL 736


>gi|153799536|gb|ABS50519.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
          Length = 740

 Score = 1053 bits (2723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/658 (73%), Positives = 584/658 (88%), Gaps = 2/658 (0%)

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           ++ + ++ +++PPTPLLDTINYP+H+KNLS+++L+QLA E+RA+++F VSKTGGHLG SL
Sbjct: 79  IAPKKDFSAEKPPTPLLDTINYPVHLKNLSVQDLEQLATEIRAELVFGVSKTGGHLGGSL 138

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV++LTVALH+VF++P+DRI+WDVGHQ+YPHKILTGRR KMHT+RQT GL+GF KR ES+
Sbjct: 139 GVVDLTVALHHVFDSPEDRIIWDVGHQSYPHKILTGRRSKMHTIRQTSGLAGFPKRDESK 198

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           YD FG GHSSTSISAGLGMAVGRDL  + N+VVAVIGDGAMTAGQAYEAMNN+GYL+S++
Sbjct: 199 YDAFGAGHSSTSISAGLGMAVGRDLLRKSNHVVAVIGDGAMTAGQAYEAMNNSGYLESNL 258

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           I+ILNDNKQVSLPTATLDG  PPVGAL+ AL++LQS++ +R+LRE AKG+TKQIGG  HE
Sbjct: 259 IIILNDNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKIRKLREAAKGLTKQIGGQTHE 318

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           +A+KVD+Y RG+I+ + S+LFEELGLYYIGPVDGHN++D+V ILE++K+   +GPVLIH+
Sbjct: 319 MASKVDKYTRGIINPAASSLFEELGLYYIGPVDGHNIEDMVTILEKIKSMPDSGPVLIHL 378

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKG+GYP AE+AADK HGV KFDPATGKQFKS +   SYT YFAE+LIAEAEVD  +V
Sbjct: 379 VTEKGKGYPPAEEAADKLHGVVKFDPATGKQFKSKSSVLSYTQYFAESLIAEAEVDSKIV 438

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QR Y
Sbjct: 439 AIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGY 498

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +MACLPNMVVMAPSDE EL HM
Sbjct: 499 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYMACLPNMVVMAPSDEVELMHM 558

Query: 541 VATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQ 599
           VATAAAIDDRPSCFR+PRGNG+G+  LP  NKG+PLE+G+GRIL+EG RVA+LG+GT +Q
Sbjct: 559 VATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGLPLEIGRGRILVEGTRVAILGFGTIIQ 618

Query: 600 SCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           +CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK HE+L+TVEEGSIGGFGSHV  
Sbjct: 619 NCLAAGKMLNEQAGISVTIADARFCKPLDGDLIKRLAKEHEILLTVEEGSIGGFGSHVSH 678

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGL+P HIAAT+ ++LG+  +AL
Sbjct: 679 FLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLSPKHIAATIMSLLGKPHDAL 736


>gi|255586041|ref|XP_002533688.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223526414|gb|EEF28696.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 728

 Score = 1053 bits (2722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/655 (74%), Positives = 568/655 (86%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +   +P TP+LDT+NYPIHM NLS+++L+ LADELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 74  FSGTKPATPVLDTVNYPIHMNNLSVQDLEVLADELREEIVYVVSKTGGHLSSSLGVAELT 133

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P DRI+WDVGHQ YPHKILTGRR KM ++RQT GL+GF KR ESE+D FG 
Sbjct: 134 VALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMSSIRQTFGLAGFPKRDESEHDAFGA 193

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAVGRDL G+ N+V+AVIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 194 GHSSTSISAGLGMAVGRDLVGKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 253

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTAT+DGP PPVGALS AL++LQS+R +R+LRE AKG+TKQIGG  HE+AAKVD
Sbjct: 254 NKQVSLPTATVDGPAPPVGALSKALTKLQSSRKIRQLREAAKGITKQIGGQTHEIAAKVD 313

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
            Y RGM +GSG++LFEELGLYYIGPVDGH+V+DLV IL++VK+    GPVLIHV+TEKG+
Sbjct: 314 TYVRGMAAGSGASLFEELGLYYIGPVDGHSVEDLVTILKKVKSLPAPGPVLIHVITEKGK 373

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFDP +GKQ KS + T+SYT YFAE+LIAEAE D  +VAIHAAM
Sbjct: 374 GYSPAEVAADKMHGVVKFDPTSGKQLKSKSNTKSYTQYFAESLIAEAEQDDKIVAIHAAM 433

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF ++FP +CFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHD
Sbjct: 434 GGGTGLNLFQKQFPEKCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHD 493

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFA+DRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDE EL HMVATAAA
Sbjct: 494 VDLQKLPVRFAIDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDETELMHMVATAAA 553

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYPRGNGIG  LPP NKG PLE+GKGRIL EG RVALLGYGT VQSCLAA+ 
Sbjct: 554 IDDRPSCFRYPRGNGIGTILPPNNKGTPLEIGKGRILREGSRVALLGYGTMVQSCLAAAD 613

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+   +  TVADARFCKPLD  L+R LA+ HE+LITVEEGSIGGFGSHV  FL  +GLL
Sbjct: 614 LLKKFNITATVADARFCKPLDGQLVRQLAQEHEILITVEEGSIGGFGSHVANFLCLNGLL 673

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           DG +KWRP++LPDRYIDHGS  DQ+ +AGL+  HIAATV +++G  +++L +++ 
Sbjct: 674 DGNLKWRPMMLPDRYIDHGSQTDQIEEAGLSSKHIAATVVSLIGGQKDSLHLLNL 728


>gi|255583239|ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 714

 Score = 1051 bits (2719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/675 (73%), Positives = 575/675 (85%), Gaps = 6/675 (0%)

Query: 44  DNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRA 103
           D  ++ ++K  +G       + E+  ++P TPLLDTINYP+HMKNLS+++L+QLA ELRA
Sbjct: 45  DGKKMMIRKEKDGW------KIEFSKEKPATPLLDTINYPVHMKNLSVQDLEQLAAELRA 98

Query: 104 DVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHT 163
           D++ +VSKTGGHL SSLGV+EL+VALH+VFN P D+I+WDVGHQ YPHKILTGRR KMHT
Sbjct: 99  DIVHSVSKTGGHLSSSLGVVELSVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHT 158

Query: 164 MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 223
           MR+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N+V++VIGDGAMTA
Sbjct: 159 MRKTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGKNNHVISVIGDGAMTA 218

Query: 224 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 283
           GQAYEAMNNAGYLDS++IVILNDNKQVSLPTATLDGP  PVGALSSAL+++Q++   R+L
Sbjct: 219 GQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALTKIQASTKFRKL 278

Query: 284 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 343
           RE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGH+++DLV I
Sbjct: 279 REAAKSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHSIEDLVTI 338

Query: 344 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 403
            ++VK     GPVLIH+VTEKG+GYP AE AADK HGV KFD  TGKQFK  + T SYT 
Sbjct: 339 FQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVETGKQFKQKSSTLSYTQ 398

Query: 404 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 463
           YFAEALI EAEVD  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA E
Sbjct: 399 YFAEALIKEAEVDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATE 458

Query: 464 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 523
           GLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACL
Sbjct: 459 GLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACL 518

Query: 524 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 583
           PNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIGV LPP NKG  LE+GKGRIL
Sbjct: 519 PNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGVALPPNNKGTTLEIGKGRIL 578

Query: 584 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 643
           +EG RVA+LGYG+ VQ C+ A+ +L +  + +TVADARFCKPLD  LIR LAK HE LIT
Sbjct: 579 MEGNRVAILGYGSIVQQCVEAAGMLRTRDIYVTVADARFCKPLDTDLIRRLAKEHEFLIT 638

Query: 644 VEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 703
           VEEGSIGGF SHV  FL+ +G+LDG +K R +VLPDRYIDHGSP DQ+ +AGL+ +HIAA
Sbjct: 639 VEEGSIGGFCSHVSHFLSLNGILDGPLKLRSMVLPDRYIDHGSPLDQIQEAGLSSNHIAA 698

Query: 704 TVFNILGQTREALEI 718
           TV ++LG+ +EAL+ 
Sbjct: 699 TVLSLLGKPKEALQF 713


>gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Taxus x media]
          Length = 742

 Score = 1051 bits (2718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/653 (74%), Positives = 566/653 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           EY  ++PPTPLLDTINYP HMKNL++++LKQLA ELR ++IF VSKTGGHL +SLGV++L
Sbjct: 89  EYTGEKPPTPLLDTINYPKHMKNLNVQDLKQLAKELREEIIFGVSKTGGHLSASLGVVDL 148

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVFN P+D+I+WDVGHQ+YPHKILTGRR  M ++RQT G++GF KR+ESE+D FG
Sbjct: 149 TVALHYVFNTPQDKIVWDVGHQSYPHKILTGRRSNMSSIRQTSGIAGFPKRAESEHDAFG 208

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA GRDL G  N+ +AVIGDGAMTAGQAYEAMNNAG+LDS++I+ILN
Sbjct: 209 AGHSSTSISAALGMAAGRDLLGLPNHCIAVIGDGAMTAGQAYEAMNNAGFLDSNLIIILN 268

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTAT+DGP PPVGALS ALS++Q+++  R LRE AK +T+QIGGP HE+AAKV
Sbjct: 269 DNKQVSLPTATVDGPAPPVGALSKALSKIQASKKFRLLREAAKDITQQIGGPTHEIAAKV 328

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS   STL EELGLYYIGPVDGH++ DLVAILE VK     GPVLIHVVTEKG
Sbjct: 329 DEYARGMISAPRSTLLEELGLYYIGPVDGHSIQDLVAILENVKAMPAPGPVLIHVVTEKG 388

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AEKAAD+ HGV KFDP+TGKQFK+ + T SYT YFAE LIAEAE D  +V IHAA
Sbjct: 389 KGYPPAEKAADRLHGVVKFDPSTGKQFKAKSPTLSYTQYFAEGLIAEAEKDDKIVGIHAA 448

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN+F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 449 MGGGTGLNIFQKRFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 508

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNM+VMAP DEAEL HMVATAA
Sbjct: 509 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPCDEAELIHMVATAA 568

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIGV LPP NKG P+E+GKGRIL EG RVA+LG+G+ +Q+CL A 
Sbjct: 569 AIDDRPSCFRFPRGNGIGVPLPPNNKGTPVEIGKGRILAEGTRVAILGFGSIIQNCLGAR 628

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +LE  G+ +TVADARFCKPLD  L+R L K HE+LITVEEGS+GGFGSHV  FLA +GL
Sbjct: 629 EMLEKQGISVTVADARFCKPLDGDLLRRLVKEHEILITVEEGSVGGFGSHVSHFLALNGL 688

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LDG +KWRP+VLPDRYI+HG+P DQ+ +AGL+  HIAATV +++G+ + A ++
Sbjct: 689 LDGKLKWRPMVLPDRYIEHGAPKDQMDEAGLSSRHIAATVMSLMGKPQAAFDL 741


>gi|218199226|gb|EEC81653.1| hypothetical protein OsI_25196 [Oryza sativa Indica Group]
          Length = 713

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/660 (75%), Positives = 565/660 (85%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           AS + + +Y  ++P TPLLDT+NYP+HMKNLS  EL+QLA ELRA+++  VSKTGGHL S
Sbjct: 53  ASGAWKIDYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSS 112

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+EL VALH+VF+ P+D+I+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR E
Sbjct: 113 SLGVVELAVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDE 172

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           S +D FG GHSSTSISA LGMAV RDL G+KN+V++VIGDGAMTAGQAYEAMNN+GYLDS
Sbjct: 173 SAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDS 232

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           +MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+  LR LRE AK VTKQIGG  
Sbjct: 233 NMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQA 292

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HE+AAKVDEYARGM+S SGSTLFEELGLYYIGPVDGH+VDDLVAI  +VK+    GPVL+
Sbjct: 293 HEVAAKVDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLV 352

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           H+VTEKG+GYP AE AAD+ HGV KFDP TG+QFKS   T SYT YFAEALI EAE D  
Sbjct: 353 HIVTEKGKGYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDK 412

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           VV IHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR
Sbjct: 413 VVGIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR 472

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
            YDQVVHDVDLQ+LPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAP+DEAEL 
Sbjct: 473 GYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELM 532

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFR+PRGNGIG  LPP +KG PLEVGKGR+L+ G RVALLGYGT V
Sbjct: 533 HMVATAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMV 592

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+C+ A+  L+ +G+ +TVADARFCKPLD  LIR LA  HEVL+TVEEGSIGGFGSHV  
Sbjct: 593 QACMKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAH 652

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +L+  GLLDG +K R + LPDRYIDHG+P DQL +AGLTP HIAATV ++LG+  EAL++
Sbjct: 653 YLSLSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPMEALQL 712


>gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa Japonica Group]
 gi|75225072|sp|Q6YU51.1|DXS2_ORYSJ RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; Flags:
           Precursor
 gi|34394179|dbj|BAC84616.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|50509413|dbj|BAD31023.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|113610622|dbj|BAF21000.1| Os07g0190000 [Oryza sativa Japonica Group]
 gi|215704796|dbj|BAG94824.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222636586|gb|EEE66718.1| hypothetical protein OsJ_23394 [Oryza sativa Japonica Group]
          Length = 713

 Score = 1046 bits (2706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/660 (75%), Positives = 565/660 (85%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           AS + + +Y  ++P TPLLDT+NYP+HMKNLS  EL+QLA ELRA+++  VSKTGGHL S
Sbjct: 53  ASGAWKIDYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSS 112

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
           SLGV+EL VALH+VF+ P+D+I+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR E
Sbjct: 113 SLGVVELAVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDE 172

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           S +D FG GHSSTSISA LGMAV RDL G+KN+V++VIGDGAMTAGQAYEAMNN+GYLDS
Sbjct: 173 SAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDS 232

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           +MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+  LR LRE AK VTKQIGG  
Sbjct: 233 NMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQA 292

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HE+AAKVDEYARGM+S SGSTLFEELGLYYIGPVDGH+VDDLVAI  +VK+    GPVL+
Sbjct: 293 HEVAAKVDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLV 352

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           H+VTEKG+GYP AE AAD+ HGV KFDP TG+QFKS   T SYT YFAEALI EAE D  
Sbjct: 353 HIVTEKGKGYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDK 412

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           VV IHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR
Sbjct: 413 VVGIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQR 472

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
            YDQVVHDVDLQ+LPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAP+DEAEL 
Sbjct: 473 GYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELM 532

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           HMVATAAAIDDRPSCFR+PRGNGIG  LPP +KG PLEVGKGR+L+ G RVALLGYGT V
Sbjct: 533 HMVATAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMV 592

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           Q+C+ A+  L+ +G+ +TVADARFCKPLD  LIR LA  HEVL+TVEEGSIGGFGSHV  
Sbjct: 593 QACMKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAH 652

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +L+  GLLDG +K R + LPDRYIDHG+P DQL +AGLTP HIAATV ++LG+  EAL++
Sbjct: 653 YLSLSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPLEALQL 712


>gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score = 1045 bits (2701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/675 (72%), Positives = 575/675 (85%), Gaps = 6/675 (0%)

Query: 44  DNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRA 103
           +   I +KK  +G       + ++  ++PPTPLLDTINYP+HMKNLS  +L+QLA ELRA
Sbjct: 47  EGKMISIKKEKDG------WKIDFSGEKPPTPLLDTINYPVHMKNLSAHDLEQLAAELRA 100

Query: 104 DVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHT 163
           +++++V+KTGGHL +SLGV++LTVALH+VFN P+DRI+WDVGHQ YPHKILTGRR KMHT
Sbjct: 101 EIVYSVAKTGGHLSASLGVVDLTVALHHVFNTPEDRIIWDVGHQAYPHKILTGRRSKMHT 160

Query: 164 MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 223
           +RQT GL+GF KR ES YD FG GHSSTSISAGLGMAV RD+ G+ NNV++VIGDGAMTA
Sbjct: 161 IRQTSGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTA 220

Query: 224 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 283
           GQAYEAMNNAG+LD+++IV+LNDNKQVSLPTATLDGP  PVGALSSALS+LQ++   R+L
Sbjct: 221 GQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKFRQL 280

Query: 284 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 343
           RE AK +TKQIG   HE+AAKVDEYARGM+S +GSTLFEELGLYYIGPVDGH+++DLV I
Sbjct: 281 REAAKSITKQIGPQAHEVAAKVDEYARGMLSATGSTLFEELGLYYIGPVDGHSIEDLVTI 340

Query: 344 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 403
            ++VK     GPVLIH+VTEKG+GYP AE AADK HGV KFDP TGKQFKS + T SYT 
Sbjct: 341 FQKVKAMPAPGPVLIHIVTEKGKGYPPAEVAADKMHGVVKFDPKTGKQFKSKSPTLSYTQ 400

Query: 404 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 463
           YFAE+LI EAE+D  ++AIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA E
Sbjct: 401 YFAESLIKEAEIDNKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATE 460

Query: 464 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 523
           GLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACL
Sbjct: 461 GLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACL 520

Query: 524 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 583
           PNM+VMAPSDEAEL HMVATAA IDDRP CFR+PRGNGIGV LPP NKG PLE+GKGRIL
Sbjct: 521 PNMIVMAPSDEAELMHMVATAAKIDDRPCCFRFPRGNGIGVALPPNNKGTPLEIGKGRIL 580

Query: 584 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 643
           +EG RVA+LGYG+ VQ CL A+ +L+S+ +  TVADA+FCKPLD  LI++LAK HE+LIT
Sbjct: 581 VEGSRVAILGYGSIVQQCLGAAEMLKSHNVSPTVADAKFCKPLDGDLIKTLAKEHEILIT 640

Query: 644 VEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 703
           VEEGSIGGFGSHV  FL+  G+LDG +K R L LPDRYIDHG+P DQ+ +AGL+  HI A
Sbjct: 641 VEEGSIGGFGSHVTHFLSLTGILDGPIKVRSLFLPDRYIDHGAPVDQIEEAGLSSRHICA 700

Query: 704 TVFNILGQTREALEI 718
           T+ ++LG+ +EAL++
Sbjct: 701 TILSLLGKPKEALKL 715


>gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/653 (74%), Positives = 563/653 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++  ++PPTPLLDTINYP+H KNLS ++L+QLA ELRAD++++VSKTGGHL SSLGV+EL
Sbjct: 58  DFSGEKPPTPLLDTINYPVHTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVEL 117

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
            VALH+VF+ P D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES YD FG
Sbjct: 118 AVALHHVFSTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFG 177

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAV RDL G+ NNV++VIGDGAMTAGQAYEAMNNAG+LD+++IVILN
Sbjct: 178 AGHSSTSISAGLGMAVARDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVILN 237

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSSAL+++Q++   R+LRE AK +TKQIGG  H++AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKV 297

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGHN++DLV I ++VK     GPVLIH+VTEKG
Sbjct: 298 DEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKG 357

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV KFD  TGKQFK  + T SYT YFAEALI EAE D  +VAIHAA
Sbjct: 358 KGYPPAEAAADKMHGVVKFDVQTGKQFKPKSPTLSYTQYFAEALIKEAETDNKIVAIHAA 417

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 418 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 477

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +MACLPNMVVMAPSDEAEL HMVATAA
Sbjct: 478 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMVATAA 537

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKGRIL+EG RVA+LGYG+ VQ C+ A+
Sbjct: 538 AIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNRVAILGYGSIVQQCVEAA 597

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
           ++L + G+ +TVADARFCKPLD  LIR LAK HE LITVEEGSIGGF SHV  FL+  G+
Sbjct: 598 SMLRTQGISVTVADARFCKPLDTDLIRQLAKEHEFLITVEEGSIGGFSSHVSHFLSLSGI 657

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LDG +K R +VLPDRYIDHGSP DQ+ +AG++ +HI ATV ++LG+ +EAL+ 
Sbjct: 658 LDGPLKLRAMVLPDRYIDHGSPQDQIQEAGISSNHITATVLSLLGKPKEALQF 710


>gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 717

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/653 (75%), Positives = 566/653 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           EY  ++P TPLLDTINYP HMKNL+ +EL+QLA ELRAD++ +VSKTGGHL SSLGV+EL
Sbjct: 60  EYTKEKPQTPLLDTINYPPHMKNLNTQELEQLAAELRADIVHSVSKTGGHLSSSLGVVEL 119

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VF+ P+D+I+WDVGHQ YPHKILTGRR KMHT+RQT GL+GF KR ES++D FG
Sbjct: 120 SVALHHVFSTPEDKIIWDVGHQAYPHKILTGRRSKMHTIRQTSGLAGFPKRDESDHDAFG 179

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGAMTAGQAYEAMNNAG+LDS++IV+LN
Sbjct: 180 AGHSSTSISAGLGMAVGRDLLGKSNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVVLN 239

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSSALS+LQ++   R+LRE AK VTKQIGG   E+AAKV
Sbjct: 240 DNKQVSLPTATLDGPATPVGALSSALSKLQASSKFRKLREAAKKVTKQIGGQTQEIAAKV 299

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGM+S  GSTLFEELGLYYIGPVDGHNV+DLV I E+VK     GPVL+H+VTEKG
Sbjct: 300 DEYARGMMSAQGSTLFEELGLYYIGPVDGHNVEDLVTIFEKVKALPAPGPVLVHIVTEKG 359

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KFDP TGKQFKS A T SYT YFAEALI EAEVD  +VAIHAA
Sbjct: 360 KGYPPAEAAADRMHGVVKFDPETGKQFKSKAPTLSYTQYFAEALIKEAEVDSKIVAIHAA 419

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F ++FP R FDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 420 MGGGTGLNFFQKKFPERTFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 479

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFA+DRAGLVGADGPTHCG+FD+T+MACLPNM+VMAPSDE+EL HMVATAA
Sbjct: 480 DVDLQKLPVRFAVDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPSDESELIHMVATAA 539

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIGVELP   KG P+E+GKGRIL+EG RVA+LGYG+ VQ C+ A+
Sbjct: 540 AIDDRPSCFRFPRGNGIGVELPLNLKGTPVEIGKGRILMEGTRVAILGYGSIVQQCVDAA 599

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L+S  + +TVADARFCKPLD  LIR LAK HE LIT+EEGSIGGFGSHV  FL+  GL
Sbjct: 600 HMLKSRDIAVTVADARFCKPLDTELIRRLAKEHEYLITIEEGSIGGFGSHVAHFLSLSGL 659

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LDG +K R + LPDRYIDHG+P DQ+ +AGL+  HI+ATV ++LG+++EALE 
Sbjct: 660 LDGNLKLRAMALPDRYIDHGAPQDQIEEAGLSSWHISATVLSLLGRSKEALEF 712


>gi|225469658|ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|296090521|emb|CBI40852.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score = 1043 bits (2697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/653 (75%), Positives = 565/653 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E+  ++PPTPLLDTINYP+HMKNLS ++L+QLA ELRAD++ +VSKTGGHL SSLGV+EL
Sbjct: 61  EFTGEKPPTPLLDTINYPVHMKNLSTQDLEQLAAELRADIVQSVSKTGGHLSSSLGVVEL 120

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALH+VFN P+D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES +D FG
Sbjct: 121 TVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVHDAFG 180

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+ N+VVAVIGDGAMTAGQAYEAMNNAGYLD++MI+ILN
Sbjct: 181 VGHSSTSISAGLGMAVGRDLLGKTNSVVAVIGDGAMTAGQAYEAMNNAGYLDTNMIIILN 240

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALS  L++LQS+   R+LRE AK +TKQ+GG   E+AAKV
Sbjct: 241 DNKQVSLPTATLDGPAIPVGALSRTLTKLQSSTKFRKLREAAKSITKQLGGQTFEVAAKV 300

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG++S SGSTLFEELGLYYIGPVDGHNVDDLV I ++VK     GPVLIH+VTEKG
Sbjct: 301 DEYARGLLSASGSTLFEELGLYYIGPVDGHNVDDLVGIFQKVKAMPAPGPVLIHIVTEKG 360

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KFDP +G+QFKS + T  YT YFAE+LI EA+VD  +VAIHAA
Sbjct: 361 KGYPPAEAAADRMHGVVKFDPKSGQQFKSKSPTLPYTRYFAESLIGEAKVDDKIVAIHAA 420

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQV+H
Sbjct: 421 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVIH 480

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAPSDEAEL HMVATAA
Sbjct: 481 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAA 540

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKGRIL EG RVALLGYG+ VQ C+ A+
Sbjct: 541 AIDDRPSCFRFPRGNGIGAVLPPDNKGTPLEIGKGRILAEGHRVALLGYGSIVQQCVEAA 600

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
           ++L S  + +TV DARFCKPLD  LIR LAK HE+LITVEEGSIGGFGSHV  FL  +G+
Sbjct: 601 SILRSQNIFVTVVDARFCKPLDGDLIRRLAKEHEILITVEEGSIGGFGSHVSHFLCLNGI 660

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +DG +K R +VLPDRYIDHGSP DQ+ +AGL+  HI+ATV ++LG+ +EAL +
Sbjct: 661 MDGPLKLRAMVLPDRYIDHGSPEDQIQEAGLSSKHISATVLSLLGRQKEALTL 713


>gi|356529695|ref|XP_003533424.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 712

 Score = 1042 bits (2694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/651 (75%), Positives = 563/651 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++ SQ+P TPLLDTINYP HMKNLS+++L+QLA ELRADV+ +VS TGGHL SSLGV+EL
Sbjct: 59  KFSSQKPATPLLDTINYPAHMKNLSLQDLEQLAAELRADVVHSVSNTGGHLSSSLGVVEL 118

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALH+VFN P+D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES YD FG
Sbjct: 119 TVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVYDVFG 178

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
           TGHSSTSISAGLGMAV RDL G+KN++V+VIGDGAMTAGQAYEAMNNAG+LDS+MI+ILN
Sbjct: 179 TGHSSTSISAGLGMAVARDLLGKKNSIVSVIGDGAMTAGQAYEAMNNAGFLDSNMIIILN 238

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTAT+DGP  PVGALSSALS++Q++   R+LRE AKG+TKQIGG  H+LAAKV
Sbjct: 239 DNKQVSLPTATIDGPATPVGALSSALSKIQASTKFRKLREAAKGITKQIGGTTHQLAAKV 298

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMISGSGSTLFEELGLYYIGPVDGHN++DLV ILE+VK     GP LIHVVTEKG
Sbjct: 299 DEYARGMISGSGSTLFEELGLYYIGPVDGHNIEDLVTILEKVKEMPAPGPTLIHVVTEKG 358

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV KF P +G Q K  + T +YT YFAE+LI EAE+D  +VAIHAA
Sbjct: 359 KGYPPAEVAADKMHGVVKFVPTSGHQLKPKSSTLTYTQYFAESLIKEAEIDNKIVAIHAA 418

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 419 MGGGTGLNYFHKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVH 478

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAPSDEAEL HMVATAA
Sbjct: 479 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAA 538

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKGRIL +G RVA+LGYG+ VQ CL A+
Sbjct: 539 AIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILRQGSRVAILGYGSVVQQCLQAA 598

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L+   + +TVADARFCKPLD  LI+ L K HE L+TVEEGSIGGFGSHV  FL+  GL
Sbjct: 599 QMLKPLDISVTVADARFCKPLDTDLIKLLGKEHEFLLTVEEGSIGGFGSHVSHFLSIVGL 658

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           LDG +KWRP++LPDRYI+HGSP DQ  +AGL+  +IAATV ++L + +EAL
Sbjct: 659 LDGPLKWRPMMLPDRYIEHGSPQDQTEEAGLSSKNIAATVLSLLERPKEAL 709


>gi|164604986|dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score = 1039 bits (2686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/653 (74%), Positives = 562/653 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++  ++PPTPLLDTINYP+H KNLS ++L+QLA ELRAD++++VSKTGGHL SSLGV+EL
Sbjct: 58  DFSGEKPPTPLLDTINYPVHTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVEL 117

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
            VALH+VF+ P D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES YD FG
Sbjct: 118 AVALHHVFSTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFG 177

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAV RDL G+ NNV++VIGDGAMTAGQA+EAMNNAG+LD+++IVILN
Sbjct: 178 AGHSSTSISAGLGMAVARDLLGKNNNVISVIGDGAMTAGQAHEAMNNAGFLDANLIVILN 237

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSSAL+++Q++   R+LRE AK +TKQIGG  H++AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKV 297

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGHN++DLV I ++VK     GPVLIH+VTEKG
Sbjct: 298 DEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKG 357

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV KFD  TGKQFK  + T SYT YFAEALI EAE D  +VAIHAA
Sbjct: 358 KGYPPAEAAADKMHGVVKFDVQTGKQFKPKSPTLSYTQYFAEALIKEAETDNKIVAIHAA 417

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 418 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 477

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +MACLPNMVVMAPSDEAEL HMVATAA
Sbjct: 478 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMVATAA 537

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKGRIL+EG RVA+LGYG+ VQ C+ A+
Sbjct: 538 AIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKGRILMEGNRVAILGYGSIVQQCVEAA 597

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
           ++L + G+ +TVADARFCKPLD  LIR LAK HE LITVEEGSIGGF SHV  FL+  G+
Sbjct: 598 SMLRTQGISVTVADARFCKPLDTDLIRQLAKEHEFLITVEEGSIGGFSSHVSHFLSLSGI 657

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           L G +K R +VLPDRYIDHGSP DQ+ +AG++ +HI ATV ++LG+ +EAL+ 
Sbjct: 658 LAGPLKLRAMVLPDRYIDHGSPQDQIQEAGISSNHITATVLSLLGKPKEALQF 710


>gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synthase [Chrysanthemum x morifolium]
          Length = 669

 Score = 1038 bits (2685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/656 (74%), Positives = 566/656 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           +Y  ++P TPLLDTIN+P+HMKNLS ++L+QLA ELR D++++V+ TGGHL SSLGV+EL
Sbjct: 13  DYTGEKPMTPLLDTINFPVHMKNLSTQDLEQLAAELRVDIVYSVANTGGHLSSSLGVVEL 72

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
            VALH+VFN P DRI+WDVGHQ YPHKILTGRR KM+TMR+T GL+GF KR ES +D FG
Sbjct: 73  AVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMNTMRKTSGLAGFPKRDESVHDAFG 132

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGAMTAGQAYEAMNNAG+LDS++IV+LN
Sbjct: 133 AGHSSTSISAGLGMAVGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVVLN 192

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSS L++LQ++   R+LRE AK +TKQIG   HE+AAKV
Sbjct: 193 DNKQVSLPTATLDGPATPVGALSSTLAKLQASPKFRKLREAAKSITKQIGPQAHEVAAKV 252

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DLV I E+VK+    GPVLIH+VTEKG
Sbjct: 253 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVTIFEKVKSMPAPGPVLIHIVTEKG 312

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+P AE AAD+ HGV KFD  TGKQFK+ + T SYT YFAEALI EAEVD  VVAIHAA
Sbjct: 313 KGHPPAEAAADRMHGVVKFDVGTGKQFKTKSPTLSYTQYFAEALIKEAEVDNKVVAIHAA 372

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 373 MGGGTGLNYFQKKFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 432

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL +MVATAA
Sbjct: 433 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELINMVATAA 492

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIGV LP  NKG+P+EVGKGRIL+EG RVA+LGYG+ VQ CL A+
Sbjct: 493 AIDDRPSCFRFPRGNGIGVPLPLNNKGVPIEVGKGRILLEGTRVAILGYGSIVQQCLGAA 552

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
           +LL+++ +  TVADARFCKPLD  LI+ LA  HEVL+TVEEGSIGGFGSHV  FL+ +GL
Sbjct: 553 SLLQAHNISATVADARFCKPLDAELIKRLANEHEVLLTVEEGSIGGFGSHVAHFLSLNGL 612

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           LDG +K R + LPDRYIDHG+P DQL +AGL+  HI +T+ ++LG+ +EAL+  S 
Sbjct: 613 LDGKLKLRAMTLPDRYIDHGAPQDQLEEAGLSSKHICSTLLSLLGKPKEALQYKSI 668


>gi|449432964|ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/670 (73%), Positives = 574/670 (85%), Gaps = 7/670 (1%)

Query: 54  PNGVCASLSERG------EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIF 107
           PNG   +L ++       +Y  ++P TPLLDT+N+PIHMKNLS+++L++LA ELRA+++F
Sbjct: 40  PNGEGKNLPDKEKDGLKIDYSGEKPATPLLDTVNFPIHMKNLSMQDLEKLAAELRAEIVF 99

Query: 108 NVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQT 167
           +VSKTGGHL +SLGV+EL VALH+VFN P D+I+WDVGHQ YPHKILTGRR +MHT+RQT
Sbjct: 100 SVSKTGGHLSASLGVVELAVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTLRQT 159

Query: 168 DGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAY 227
            GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+KN+V++VIGDGAMTAGQAY
Sbjct: 160 SGLAGFPKRDESIHDAFGAGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTAGQAY 219

Query: 228 EAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVA 287
           EAMNNAGYLD++MIVILNDNKQVSLPTATLDGP  PVGALSSAL++LQ++   R+LRE A
Sbjct: 220 EAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKLREAA 279

Query: 288 KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEV 347
           K +TKQIG   H +AAKVDEYARGMISGSGST FEELGLYYIGPVDGHNV DLV ILE+V
Sbjct: 280 KTITKQIGKQTHGVAAKVDEYARGMISGSGSTFFEELGLYYIGPVDGHNVGDLVTILEKV 339

Query: 348 KNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAE 407
           K+    GPVLIH++TEKG+GYP AE AADK HGV KFDP TGKQFK+ + T SYT YFAE
Sbjct: 340 KSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKSPTLSYTQYFAE 399

Query: 408 ALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKP 467
           +LI EAE+D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EG+KP
Sbjct: 400 SLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQRCFDVGIAEQHAVTFAAGLATEGIKP 459

Query: 468 FCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMV 527
           FCAIYSSF+QR +DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNM+
Sbjct: 460 FCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMI 519

Query: 528 VMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE 587
           VMAP+DEAEL HMVATAA IDDRPSCFR+PRGNGIGV +PP  KG P+E+GKGRI++EG 
Sbjct: 520 VMAPADEAELIHMVATAAEIDDRPSCFRFPRGNGIGVVVPPNFKGTPIEIGKGRIVMEGT 579

Query: 588 RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG 647
           RVA+LGYG+ VQ C+ AS LL++ G+  TVADARFCKPLD  LIR LAK HE+LITVEEG
Sbjct: 580 RVAILGYGSIVQQCVEASELLKTRGITPTVADARFCKPLDTQLIRQLAKEHEILITVEEG 639

Query: 648 SIGGFGSHVVQFLAQDGLLDG-TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           SIGGFGSHV  FL+  G+LD   +K R +VLPDRYIDHGSP DQ+ +AGL+  HIAATV 
Sbjct: 640 SIGGFGSHVSYFLSVTGILDQHHLKLRSMVLPDRYIDHGSPGDQMEEAGLSSEHIAATVL 699

Query: 707 NILGQTREAL 716
            ++G+++EAL
Sbjct: 700 TLMGRSKEAL 709


>gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synthase; transketolase [Arabidopsis
           thaliana]
          Length = 604

 Score = 1037 bits (2681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/633 (78%), Positives = 552/633 (87%), Gaps = 32/633 (5%)

Query: 84  IHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWD 143
           +HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+LGV+ELTVALHY+FN P D+ILWD
Sbjct: 1   MHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELTVALHYIFNTPHDKILWD 60

Query: 144 VGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGR 203
           VGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGR
Sbjct: 61  VGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGR 120

Query: 204 DLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPP 263
           DLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  P
Sbjct: 121 DLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQP 180

Query: 264 VGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEE 323
           VGALS ALSRLQSN                                 GMI  + STLFEE
Sbjct: 181 VGALSCALSRLQSNC--------------------------------GMIRETSSTLFEE 208

Query: 324 LGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAK 383
           LG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYHGV K
Sbjct: 209 LGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLK 268

Query: 384 FDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRC 443
           FDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRC
Sbjct: 269 FDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRC 328

Query: 444 FDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGL 503
           FDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL
Sbjct: 329 FDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGL 388

Query: 504 VGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIG 563
           +GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIG
Sbjct: 389 MGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIG 448

Query: 564 VELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFC 623
           V LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFC
Sbjct: 449 VSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFC 508

Query: 624 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 683
           KPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYI+
Sbjct: 509 KPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIE 568

Query: 684 HGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           HGSP DQLA+AGLT SHIAAT  N++G  REAL
Sbjct: 569 HGSPMDQLAEAGLTASHIAATALNLMGTPREAL 601


>gi|209360747|gb|ACI43010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
          Length = 715

 Score = 1035 bits (2676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/656 (73%), Positives = 565/656 (86%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E+  ++P TPLLDTINYP+HMKNL+ ++L+QLA ELR D++++V+ TGGHL SSLGV+EL
Sbjct: 59  EFAGEKPVTPLLDTINYPVHMKNLTTQDLEQLAAELRQDIVYSVANTGGHLSSSLGVVEL 118

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VFN P D+I+WDVGHQ YPHKILTGRR KMHT+R+T GL+GF KR ES +D FG
Sbjct: 119 SVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESAHDAFG 178

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGAMTAG+AYEA+NNAG+LDS++IV+LN
Sbjct: 179 AGHSSTSISAGLGMAVGRDLLGKTNNVISVIGDGAMTAGRAYEAINNAGFLDSNLIVVLN 238

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALS ALS+LQ++   R+LRE AK +TKQIG   HE+AAKV
Sbjct: 239 DNKQVSLPTATLDGPATPVGALSGALSKLQASTKFRKLREAAKSITKQIGPQAHEVAAKV 298

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DLV I E+VK+    GPVLIH+VTEKG
Sbjct: 299 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVNIFEKVKSMPAPGPVLIHIVTEKG 358

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KFD  TGKQFK+ + T SYT YFAE+LI EAE D  +VAIHAA
Sbjct: 359 KGYPPAEAAADRMHGVVKFDVPTGKQFKTKSPTLSYTQYFAESLIKEAEADNKIVAIHAA 418

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F ++ P RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 419 MGGGTGLNYFQKKCPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 478

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAP+DEAEL HMVATAA
Sbjct: 479 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPADEAELMHMVATAA 538

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LPP NKGIP+EVGKGRIL+EG RVA+LGYG+ VQ CL A+
Sbjct: 539 AIDDRPSCFRFPRGNGIGAPLPPNNKGIPIEVGKGRILLEGTRVAILGYGSIVQECLGAA 598

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
           +LL+++ +  TVADARFCKPLD  LIR LA  HEVL+TVEEGSIGGFGSHV  FL+ +GL
Sbjct: 599 SLLQAHNVSATVADARFCKPLDTGLIRRLANEHEVLLTVEEGSIGGFGSHVAHFLSLNGL 658

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           LDG +K R + LPD+YIDHG+P DQL +AGL+  HI +++ ++LG+ +EAL+  S 
Sbjct: 659 LDGKLKLRAMTLPDKYIDHGAPQDQLEEAGLSSKHICSSLLSLLGKPKEALQYKSI 714


>gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
          Length = 715

 Score = 1033 bits (2672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/656 (73%), Positives = 564/656 (85%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E+  ++P TPLLDTINYP+HMKNL+ ++L+QLA ELR D++++V+ TGGHL SSLGV+EL
Sbjct: 59  EFAGEKPVTPLLDTINYPVHMKNLTTQDLEQLAAELRQDIVYSVANTGGHLSSSLGVVEL 118

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VFN P D+I+WDVGHQ YPHKILTGRR KMHT+R+T GL+GF KR ES +D FG
Sbjct: 119 SVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHTIRKTSGLAGFPKRDESAHDAFG 178

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGAMTAG+AYEA+NNAG+LDS++IV+LN
Sbjct: 179 AGHSSTSISAGLGMAVGRDLLGKTNNVISVIGDGAMTAGRAYEAINNAGFLDSNLIVVLN 238

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALS ALS+LQ++   R+LRE AK +TKQIG   HE+AAKV
Sbjct: 239 DNKQVSLPTATLDGPATPVGALSGALSKLQASTKFRKLREAAKSITKQIGPQAHEVAAKV 298

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DLV I E+VK+    GPVLIH+VTEKG
Sbjct: 299 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVNIFEKVKSMPAPGPVLIHIVTEKG 358

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KFD  TGKQFK+ + T SYT YFAE+LI EAE D  +VAIHAA
Sbjct: 359 KGYPPAEAAADRMHGVVKFDVPTGKQFKTKSPTLSYTQYFAESLIKEAEADNKIVAIHAA 418

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F ++ P RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 419 MGGGTGLNYFQKKCPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 478

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAP+DEAEL HMVATAA
Sbjct: 479 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPADEAELMHMVATAA 538

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LPP NKGIP+EVGKGRIL+EG RVA+LGYG+ VQ CL A+
Sbjct: 539 AIDDRPSCFRFPRGNGIGAPLPPNNKGIPIEVGKGRILLEGTRVAILGYGSIVQECLGAA 598

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
           +LL+++ +  TVADARFCKPLD  LIR LA  HEVL+TVEEGSIGGFGSHV  FL+ +GL
Sbjct: 599 SLLQAHNVSATVADARFCKPLDTGLIRRLANEHEVLLTVEEGSIGGFGSHVAHFLSINGL 658

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           LDG +K R + LPD+YIDHG+P DQL + GL+  HI +++ ++LG+ +EAL+  S 
Sbjct: 659 LDGKLKLRAMTLPDKYIDHGAPQDQLEETGLSSKHICSSLLSLLGKPKEALQYKSI 714


>gi|356523939|ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score = 1033 bits (2672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/673 (71%), Positives = 570/673 (84%), Gaps = 6/673 (0%)

Query: 44  DNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRA 103
           D  +  +KK  +G       +  Y  ++P TPLLDT+N+PIHMKNLS ++L+QLA ELRA
Sbjct: 45  DEERTIIKKEKDGW------KINYSGEKPATPLLDTVNHPIHMKNLSTQDLEQLAAELRA 98

Query: 104 DVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHT 163
           D++ +VS+TGGHL SSLGV+EL+VALH+VFN P+D+I+WDVGHQ YPHKILTGRR +MHT
Sbjct: 99  DIVHSVSETGGHLSSSLGVVELSVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHT 158

Query: 164 MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 223
           +R+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N++++VIGDGA+TA
Sbjct: 159 IRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGALTA 218

Query: 224 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 283
           GQAYEAMNNAG+LDS+MIV+LNDNKQVSLPTATLDGP  PVGALSSALS++Q++   R+L
Sbjct: 219 GQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSSALSKIQASSEFRKL 278

Query: 284 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 343
           RE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHN++DLV I
Sbjct: 279 REAAKTITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTI 338

Query: 344 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 403
            E+VK     GPVLIHVVTEKG+GYP AEKAAD+ HGV KFDP TG Q K+ + T SYT 
Sbjct: 339 FEKVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRMHGVVKFDPKTGHQLKAKSSTLSYTQ 398

Query: 404 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 463
           YFAE+LI EAE+D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA E
Sbjct: 399 YFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGLAAE 458

Query: 464 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 523
           GLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD+T+M+CL
Sbjct: 459 GLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMSCL 518

Query: 524 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 583
           PNMVVMAPSDE EL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKGRIL
Sbjct: 519 PNMVVMAPSDETELMHMVATAAAIDDRPSCFRFPRGNGIGATLPLNNKGTPLEIGKGRIL 578

Query: 584 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 643
           +EG RVA+LGYG+ VQ C  AS +L+  G+ +TVADARFCKPLD  LIR LAK HE+LIT
Sbjct: 579 VEGSRVAILGYGSVVQQCRQASEMLKELGIDVTVADARFCKPLDTGLIRLLAKEHEILIT 638

Query: 644 VEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 703
           VEEGSIGGFGSHV QFL+  G+LDG +KWR ++LPDRYI+HGSP  Q+ +AGL+   IAA
Sbjct: 639 VEEGSIGGFGSHVSQFLSLSGILDGPLKWRAMMLPDRYIEHGSPQVQIEEAGLSSKQIAA 698

Query: 704 TVFNILGQTREAL 716
           TV +++ + ++AL
Sbjct: 699 TVLSLMERPKQAL 711


>gi|224071349|ref|XP_002303416.1| predicted protein [Populus trichocarpa]
 gi|222840848|gb|EEE78395.1| predicted protein [Populus trichocarpa]
          Length = 692

 Score = 1033 bits (2671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/647 (74%), Positives = 559/647 (86%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           ++P TPLLDTI+YP HM NLS ++L+QLA ELRAD++++V+KTGGHL SSLGV+EL+VAL
Sbjct: 42  EKPSTPLLDTIDYPFHMDNLSTQDLEQLASELRADIVYSVAKTGGHLSSSLGVVELSVAL 101

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           H+VFN P+D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES YD FG GHS
Sbjct: 102 HHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHS 161

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISAGLGMAV RDL G+ N+V++VIGDGAMTAGQAYEAMNNAG+LDS++IVILNDNKQ
Sbjct: 162 STSISAGLGMAVARDLLGKSNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQ 221

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           VSLPTATLDGP  PVGALSS L++LQ++   R+L E AKG+TKQI G  H++AAKVDEYA
Sbjct: 222 VSLPTATLDGPATPVGALSSTLTKLQASAKFRKLHEAAKGITKQIDGQTHQVAAKVDEYA 281

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RGMIS SGSTLFEELGLYYIGPVDGH+++DLV I + VK     GPVLIH++TEKG+GYP
Sbjct: 282 RGMISASGSTLFEELGLYYIGPVDGHSIEDLVTIFQNVKAMPAPGPVLIHIITEKGKGYP 341

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE AADK HGV KFD  +G+QFK  + T SYT YFAE+LI EAEVD  +VAIHAAMGGG
Sbjct: 342 PAEAAADKMHGVVKFDVKSGQQFKLKSSTLSYTRYFAESLIKEAEVDNKIVAIHAAMGGG 401

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDL
Sbjct: 402 TGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDL 461

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNMVVMAPSDEAEL HMVATAAAIDD
Sbjct: 462 QKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDD 521

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPSCFR+PRGNGIG  LPP NKGI LE+GKGRIL+EG RVA++GYG+ VQ C  A+++L 
Sbjct: 522 RPSCFRFPRGNGIGTVLPPNNKGIALEIGKGRILMEGNRVAIMGYGSIVQQCAEAASMLR 581

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           +  + +TVADARFCKPLD  LIR LAK HE+LITVEEGSIGGFGSHV  FL+  G+LDG 
Sbjct: 582 TQDISVTVADARFCKPLDTNLIRQLAKEHEILITVEEGSIGGFGSHVSHFLSSTGILDGP 641

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           +K R +VLPDRYIDHGSP DQ+ +AGL+ +HI ATV ++LG+ +EAL
Sbjct: 642 LKLRAMVLPDRYIDHGSPQDQIQEAGLSSNHITATVLSMLGKPKEAL 688


>gi|242043226|ref|XP_002459484.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
 gi|241922861|gb|EER96005.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
          Length = 730

 Score = 1033 bits (2671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/649 (74%), Positives = 558/649 (85%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           ++P TPLLDT+NYP+HMKNLS  EL+QLA ELRA+++  VSKTGGHL SSLGV+EL+VAL
Sbjct: 81  EKPATPLLDTVNYPLHMKNLSTSELEQLAAELRAEIVHTVSKTGGHLSSSLGVVELSVAL 140

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           H+VF+ P D+I+WDVGHQ Y HKILTGRR +MHT+RQT GL+GF KR ES +D FG GHS
Sbjct: 141 HHVFDTPDDKIIWDVGHQAYGHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFGVGHS 200

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA LGMAV RDL GRKN+VV+VIGDGAMTAGQAYEAMNN+G+LD++MIV+LNDNKQ
Sbjct: 201 STSISAALGMAVARDLLGRKNHVVSVIGDGAMTAGQAYEAMNNSGFLDANMIVVLNDNKQ 260

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           VSLPTATLDGP  PVGALS AL++LQS+   R LRE AK VTKQIGGP HE+AAKVDEYA
Sbjct: 261 VSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKVDEYA 320

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RGM+S SGS+LFEELGLYYIGPVDGH+V+DLV I E+VK+    GPVLIHVVTEKG+GYP
Sbjct: 321 RGMMSASGSSLFEELGLYYIGPVDGHSVEDLVTIFEKVKSMPAPGPVLIHVVTEKGKGYP 380

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE AAD+ HGV KF+P+TGKQ KS + T SYT YFAE+LI EA+ D  VVAIHAAMGGG
Sbjct: 381 PAEAAADRMHGVVKFEPSTGKQLKSKSSTLSYTQYFAESLIREADADDKVVAIHAAMGGG 440

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDL
Sbjct: 441 TGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDL 500

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q+LPVRFA+DRAGLVGADGPTHCG+FDVT+MACLPNMVVMAP+DEAEL HMVATAAAIDD
Sbjct: 501 QRLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVATAAAIDD 560

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPSCFR+PRGNG+G  LP GNKG P+EVG+GR+L+ G RVALLGYGT VQ+CL A+  L+
Sbjct: 561 RPSCFRFPRGNGVGAVLPAGNKGTPMEVGRGRVLVGGNRVALLGYGTMVQACLKAAEALK 620

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
              + +TVADARFCKPLD  LIR LA  HEVLIT EEGSIGGFGSHV  +L+  GLLDG 
Sbjct: 621 EQDVYVTVADARFCKPLDTGLIRELAAEHEVLITAEEGSIGGFGSHVAHYLSLTGLLDGP 680

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +K R + LPDRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA+++
Sbjct: 681 LKLRSMFLPDRYIDHGAPQDQMEEAGLTPRHIAATVLSLLGRPMEAMQL 729


>gi|356523941|ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score = 1033 bits (2671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/650 (74%), Positives = 560/650 (86%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           Y  ++P TPLLDT+N+PIHMKNLS ++L+QLA ELRAD++ +VS TGGHL SSLGV+EL+
Sbjct: 62  YSGEKPATPLLDTVNHPIHMKNLSTQDLEQLAAELRADIVHSVSDTGGHLSSSLGVVELS 121

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P+D+I+WDVGHQ YPHKILTGRR +MHT+R++ GL+GF KR ES +D FG 
Sbjct: 122 VALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKSSGLAGFPKRDESVHDAFGV 181

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAV RDL G+ N++++VIGDGA+TAGQAYEAMNNAG+LDS+MIV+LND
Sbjct: 182 GHSSTSISAGLGMAVARDLLGKNNSIISVIGDGALTAGQAYEAMNNAGFLDSNMIVVLND 241

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTATLDGP  PVGALSSALS++Q++   R+LRE AK +TKQIGG  H++AAKVD
Sbjct: 242 NKQVSLPTATLDGPATPVGALSSALSKIQASSEFRKLREAAKTITKQIGGQTHQVAAKVD 301

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EYARGMIS SGSTLFEELGLYYIGPVDGHN++DLV I E+VK     GPVLIHVVTEKG+
Sbjct: 302 EYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFEKVKAMPAPGPVLIHVVTEKGK 361

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GYP AEKAAD+ HGV KFDP TG+QFK+   T SYT YFAE+LI EAE DK +VAIHAAM
Sbjct: 362 GYPPAEKAADRMHGVVKFDPKTGQQFKAKTSTLSYTQYFAESLIKEAENDKKIVAIHAAM 421

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHD
Sbjct: 422 GGGTGLNYFHKRFPKRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHD 481

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +MACLPNMVVMAPSDEAEL HMVATAAA
Sbjct: 482 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMVATAAA 541

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFR+PRGNGIG  LP  NKG  LE+GKGRIL+EG RVA+LGYG+ VQ C  AS 
Sbjct: 542 IDDRPSCFRFPRGNGIGATLPLNNKGTSLEIGKGRILVEGSRVAILGYGSVVQQCRQASE 601

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           +L+  G+ +TVADARFCKPLD  LIR LAK HE+LITVEEGSIGGFGSHV QFL+  G+L
Sbjct: 602 MLKELGIDVTVADARFCKPLDTGLIRLLAKEHEILITVEEGSIGGFGSHVSQFLSLSGIL 661

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           DG +KWR ++LPDRYI+HGSP  Q+ +AGL+   IAATV +++ +  EAL
Sbjct: 662 DGPLKWRAMMLPDRYIEHGSPQVQIEEAGLSSKQIAATVLSLMERPNEAL 711


>gi|194701502|gb|ACF84835.1| unknown [Zea mays]
          Length = 564

 Score = 1032 bits (2668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/560 (88%), Positives = 530/560 (94%)

Query: 161 MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 220
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 1   MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 60

Query: 221 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 280
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 120

Query: 281 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 340
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 121 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 180

Query: 341 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 400
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 181 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 240

Query: 401 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 460
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 241 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGL 300

Query: 461 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 520
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 301 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 360

Query: 521 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 580
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKG
Sbjct: 361 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKG 420

Query: 581 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 640
           RIL+EG+RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 421 RILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEV 480

Query: 641 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 700
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 481 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 540

Query: 701 IAATVFNILGQTREALEIMS 720
           IAA+VFNILGQ REAL IM+
Sbjct: 541 IAASVFNILGQNREALAIMA 560


>gi|224117606|ref|XP_002331678.1| predicted protein [Populus trichocarpa]
 gi|222874097|gb|EEF11228.1| predicted protein [Populus trichocarpa]
          Length = 646

 Score = 1032 bits (2668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/644 (75%), Positives = 550/644 (85%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +   +P TP+LDTIN+PIHMKNLS++EL  L DELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 3   FTGNKPSTPVLDTINHPIHMKNLSVQELDNLVDELREEIVYTVSKTGGHLSSSLGVAELT 62

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P+D+I+WDVGHQTYPHKILTGRR +MHT+RQT GL+GF KR ESE+D FG 
Sbjct: 63  VALHHVFNTPEDKIIWDVGHQTYPHKILTGRRSRMHTIRQTFGLAGFPKREESEHDAFGA 122

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISA LGMAVGRDL G+ N+V+AVIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 123 GHSSTSISAALGMAVGRDLLGKDNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 182

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N+QVSLPTAT+DGP PPVGALS AL+RL S+R  R+LRE AKG+TKQIGG   E+AAKVD
Sbjct: 183 NRQVSLPTATVDGPAPPVGALSRALTRLHSSRKFRQLREAAKGITKQIGGQTQEIAAKVD 242

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
            Y RGM   SG+ LFEELGLYYIGPVDGHNV+DLV +L++VK     GPVLIHV+TEKG+
Sbjct: 243 SYMRGMTGASGACLFEELGLYYIGPVDGHNVEDLVDLLKKVKAMPAPGPVLIHVITEKGK 302

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFD  TGKQ KS + T SYT YFAE+LIAEAE D  +VAIHAAM
Sbjct: 303 GYTPAEVAADKMHGVVKFDTKTGKQLKSKSNTLSYTQYFAESLIAEAEKDDKIVAIHAAM 362

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHD
Sbjct: 363 GGGTGLNLFQKRFPYRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHD 422

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFMA LPNMVVMAPSDE EL HMVATAAA
Sbjct: 423 VDLQKLPVRFALDRAGLVGADGPTHCGAFDTTFMASLPNMVVMAPSDETELIHMVATAAA 482

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSC RYPRGNGIG  +PP NKG PLEVGKGR+L EG RVA+LGYGT VQSC+ A+ 
Sbjct: 483 IDDRPSCLRYPRGNGIGSIIPPNNKGTPLEVGKGRVLREGSRVAILGYGTIVQSCMQAAK 542

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LLE  G+  TVADARFCKPLD  LIR LA+ HEVLITVEEGSIGGF SHV  FL+ +GLL
Sbjct: 543 LLEETGISATVADARFCKPLDGELIRQLAQEHEVLITVEEGSIGGFSSHVSHFLSLNGLL 602

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           DG +KWRP++LPDRYIDHGS  DQ+ +AGL+P HIA+T  +++G
Sbjct: 603 DGNIKWRPMMLPDRYIDHGSQTDQIEEAGLSPKHIASTAMSLVG 646


>gi|408833346|gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 713

 Score = 1031 bits (2665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/710 (68%), Positives = 579/710 (81%), Gaps = 13/710 (1%)

Query: 9   PTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCASLSERGEYH 68
           P ++S      P K       FF  A  S  S   D  ++ ++K  +G       + ++ 
Sbjct: 16  PCFLSPKLKHFPQK------QFFARASVSK-SDGGDEGKLMIRKENDG------WKIDFS 62

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
            ++PPTPLLDTIN+P+HMKNLS+++L+QLA ELRAD+++ V+K GGHL +SLGV++L VA
Sbjct: 63  GEKPPTPLLDTINFPVHMKNLSVQDLEQLAAELRADIVYTVAKIGGHLSASLGVVDLAVA 122

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VFN P D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES YD FG GH
Sbjct: 123 LHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESTYDAFGAGH 182

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+ RDL G+ NNV++VIGDGAMTAGQAYEA+NNAG+LDS++IV+LNDNK
Sbjct: 183 SSTSISAGLGMAIARDLLGKNNNVISVIGDGAMTAGQAYEALNNAGFLDSNLIVVLNDNK 242

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           QVSLPTAT+DGP  PVGALSSALS+LQ++   R+LRE AK +TKQIG   HE+AAKVDEY
Sbjct: 243 QVSLPTATIDGPATPVGALSSALSKLQASPKFRQLREAAKTITKQIGPQAHEVAAKVDEY 302

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM S +GSTLFEELGLYYIGPVDGHN++DLV I ++VK     GPVLIH+VTEKG+GY
Sbjct: 303 ARGMFSATGSTLFEELGLYYIGPVDGHNIEDLVTIFQKVKEMPAPGPVLIHIVTEKGKGY 362

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE A DK HGV KFDPATGKQFK  A T SYT YFAE+LI EAE D  +VAIHAAMGG
Sbjct: 363 PPAESAPDKMHGVVKFDPATGKQFKVKAPTLSYTQYFAESLIKEAEADSKIVAIHAAMGG 422

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVD
Sbjct: 423 GTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVD 482

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFAMDRAGLVGADGPTHCG+FD+ +MACLPNMVVMAP+DEAEL HMVATAA ID
Sbjct: 483 LQKLPVRFAMDRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPADEAELMHMVATAAVID 542

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           DRPSCFR+PRGNG+G  LP  NKG P+E+GKGRILIEG RVA+LGYG+ VQ CL A+ALL
Sbjct: 543 DRPSCFRFPRGNGVGAVLPLNNKGTPMEIGKGRILIEGSRVAILGYGSIVQQCLGAAALL 602

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           +   + +TVADARFCKPLD  LI+ L   HE+L+TVEEGS+GGFGSHV  FL+ +G+LDG
Sbjct: 603 KDRNVSVTVADARFCKPLDADLIKRLTHEHEILLTVEEGSVGGFGSHVSHFLSLNGILDG 662

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
            +K R +VLPDRYIDHGSP DQ+ +AGL+  HI  T+ ++LG+ +EAL++
Sbjct: 663 PLKLRAMVLPDRYIDHGSPQDQIEEAGLSSRHICGTILSLLGRPKEALQL 712


>gi|225446170|ref|XP_002271585.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|297735326|emb|CBI17766.3| unnamed protein product [Vitis vinifera]
          Length = 735

 Score = 1029 bits (2661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/655 (73%), Positives = 559/655 (85%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++P TP+LDTINYPIH KNLSI EL+ LA ELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 81  FSGEKPSTPVLDTINYPIHTKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAELT 140

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           +ALH+VFN P DRI+WDVGHQ Y HKILTGRR +MHT+RQT GL+GF KR ES YD FG 
Sbjct: 141 IALHHVFNTPDDRIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFGA 200

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 201 GHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 260

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N QVSLPTAT+DGP PPVGALS AL+ LQS+R  R+LRE AKG TKQ+GG  HE+AAKVD
Sbjct: 261 NGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKQVGGQAHEIAAKVD 320

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EY RGM+ GS + LFEELGLYYIGPVDGHNV+DLV IL++V+     GPVL+HV+TEKG+
Sbjct: 321 EYMRGMVGGSNACLFEELGLYYIGPVDGHNVEDLVHILKKVRAMPAPGPVLVHVITEKGK 380

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFD  +GKQ K+ ++T+SYT YFAE+LIAEAE D++++AIHAAM
Sbjct: 381 GYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTRSYTQYFAESLIAEAERDENIIAIHAAM 440

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF + FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HD
Sbjct: 441 GGGTGLNLFQKHFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGFDQVAHD 500

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS E+EL HMVATAAA
Sbjct: 501 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVATAAA 560

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYPRGNGIG  LP  NKG PLE+GKGR+L EG RVA+LGYGT VQ+CLAAS 
Sbjct: 561 IDDRPSCFRYPRGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTVVQNCLAASK 620

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+  G+  TVADARFCKPLD  LIR LA+ HEVLITVEEGSIGGF SHV  FL  +GLL
Sbjct: 621 LLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGLNGLL 680

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           DGT+KWRP++LPDRYI+HGS  +Q+ +AGL+  HIAATV +++G+ +++L ++  
Sbjct: 681 DGTLKWRPMMLPDRYINHGSQTEQVEEAGLSSRHIAATVLSLIGENKDSLHLLKL 735


>gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 2 [Solanum
           habrochaites]
          Length = 714

 Score = 1028 bits (2658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/704 (70%), Positives = 578/704 (82%), Gaps = 10/704 (1%)

Query: 21  HKSSPVTSHFFGAALFSHFSHK--LDNHQIQLKKRPNGVCASLSERG----EYHSQRPPT 74
           H SSP    +     F +F+ K  L    +      NG      E+     ++  ++PPT
Sbjct: 14  HPSSP----YMKTPRFYNFTKKKFLVKASVNGSDEINGKIVRKEEKDSLQIDFSGEKPPT 69

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LDTINYP HMKNLS  +L+QLA ELRA+++++V+ TGGHL SSLGV++LTVALH+VF+
Sbjct: 70  PFLDTINYPKHMKNLSKMDLEQLAAELRAEIVYSVANTGGHLSSSLGVVDLTVALHHVFD 129

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+D+I+WDVGHQ Y HKILTGRR KMHTMR+T GL+ F KR ES +D FG GHSSTSIS
Sbjct: 130 TPEDKIIWDVGHQAYAHKILTGRRSKMHTMRKTSGLAPFPKRDESAHDAFGAGHSSTSIS 189

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMAV RDL G  N+V++VIGDGAMTAGQAYEAMNNAG+LDS++IVILNDNKQVSLPT
Sbjct: 190 AGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPT 249

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
           ATLDGP  PVGALSSALS+LQ++   R+LRE AK +TKQIG   HE+AAKVDEYARGM+S
Sbjct: 250 ATLDGPATPVGALSSALSKLQASLKFRQLREAAKTITKQIGPQAHEVAAKVDEYARGMLS 309

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            SGSTLFEELGLYYIGPVDGHN++DL+ ILE+VK     GPVLIH+VTEKG+GY  AE A
Sbjct: 310 ASGSTLFEELGLYYIGPVDGHNIEDLITILEKVKEMPAPGPVLIHIVTEKGKGYLPAEAA 369

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
            DK HGVA+FDP TGKQFK+ + T SYT YFAE+LI EAE D  +VAIHAAMGGGTGLN 
Sbjct: 370 DDKMHGVAQFDPKTGKQFKAKSPTLSYTRYFAESLIKEAENDNKIVAIHAAMGGGTGLNY 429

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPV
Sbjct: 430 FQKQFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPV 489

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
           RFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCF
Sbjct: 490 RFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCF 549

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           R+PRGNGIG  LP  NKGIP+EVGKGRIL EGERVA+LGYG+ +Q CL A+ +L S+ +R
Sbjct: 550 RFPRGNGIGAILPLNNKGIPIEVGKGRILREGERVAILGYGSIIQQCLGAADILNSHNVR 609

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
           +TVADARFCKPLD  LIRSLAK HE+LITVEEGSIGGFGSHV  FL+ + +LDG +K R 
Sbjct: 610 VTVADARFCKPLDADLIRSLAKEHEILITVEEGSIGGFGSHVSHFLSLNSILDGPLKLRS 669

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           ++LPDRYIDHGSP DQ+  AGL+  HI++TV  +LG+ +EA+ +
Sbjct: 670 MLLPDRYIDHGSPVDQIEAAGLSSRHISSTVLTLLGRPKEAMVV 713


>gi|357111282|ref|XP_003557443.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 713

 Score = 1028 bits (2658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/672 (70%), Positives = 570/672 (84%)

Query: 47  QIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVI 106
           ++ ++K P    A    + +Y  ++P TPLLDTIN+P+HMKNLS  +L+QL+ ELRA+++
Sbjct: 41  KVMMRKEPTVAAAPAPRKIDYSLEKPETPLLDTINFPVHMKNLSTPDLEQLSSELRAEIV 100

Query: 107 FNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQ 166
             VSKTGGHL +SLGV+EL+VALH+VF+ P D+I+WDVGHQ+YPHKILTGRR +MHT+R+
Sbjct: 101 HTVSKTGGHLSASLGVVELSVALHHVFDTPDDKIIWDVGHQSYPHKILTGRRSRMHTIRK 160

Query: 167 TDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQA 226
           T GL+GF KR ES +D FG GHSSTSISA LGMAV RDL+G+KN+V++VIGDGAMTAGQA
Sbjct: 161 TSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLQGKKNHVISVIGDGAMTAGQA 220

Query: 227 YEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREV 286
           YEAMNN+GYLDS+MIV+LNDNKQVSLPTAT+DGP  PVGALS AL++LQS+   R+LRE 
Sbjct: 221 YEAMNNSGYLDSNMIVVLNDNKQVSLPTATMDGPAKPVGALSKALTKLQSSTKFRKLREA 280

Query: 287 AKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEE 346
           AK +TKQIGG  HE+AAKVDEYARGMIS +GS+LFEELGLYYIGPVDGH+++DLV I ++
Sbjct: 281 AKTITKQIGGSTHEVAAKVDEYARGMISATGSSLFEELGLYYIGPVDGHSLEDLVTIFQK 340

Query: 347 VKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFA 406
           VK+    GPVLIH+VTEKG+GYP AE AADK HGV KFDP TGKQFK+ + T SYT YFA
Sbjct: 341 VKSMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPVTGKQFKTKSPTLSYTQYFA 400

Query: 407 EALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLK 466
           E+LI EAE D+ VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAG+A EG+K
Sbjct: 401 ESLIREAEADEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGMAAEGMK 460

Query: 467 PFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNM 526
           PFCAIYSSF+QR YDQVVHDVDLQ+LPVRFAMDRAGLVGADGPTHCG+FDVT+MACLPNM
Sbjct: 461 PFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNM 520

Query: 527 VVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG 586
           VVMAP+DEAEL HMVATA AIDDRPSCFR+PRGNG+G  LP  NKGI +++GKGR+L+ G
Sbjct: 521 VVMAPADEAELMHMVATANAIDDRPSCFRFPRGNGVGAVLPANNKGIAVQIGKGRVLVGG 580

Query: 587 ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 646
            RVALLGYGT VQ+C+ A+ +L+ + + +TVADARFCKPLD  LIR LA  HE+LIT EE
Sbjct: 581 NRVALLGYGTMVQACVKAAEMLKEHDVFVTVADARFCKPLDTQLIRDLAAEHEILITAEE 640

Query: 647 GSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           GSIGGFGSHV  +L   GLLDG +K R + LPDRYIDHG+  DQ+ +AGLTP HIAATV 
Sbjct: 641 GSIGGFGSHVAHYLGLSGLLDGHLKLRSMFLPDRYIDHGAAEDQMEEAGLTPRHIAATVL 700

Query: 707 NILGQTREALEI 718
           ++LG+  EAL++
Sbjct: 701 SLLGRPLEALQL 712


>gi|356567757|ref|XP_003552082.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/673 (71%), Positives = 564/673 (83%), Gaps = 6/673 (0%)

Query: 44  DNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRA 103
           D  +  +KK  +G       +  Y  ++P T LLDTINYPIHMKNLS ++L+QLA ELRA
Sbjct: 45  DEERTIIKKEKDGW------KINYAGEKPATLLLDTINYPIHMKNLSTQDLEQLAAELRA 98

Query: 104 DVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHT 163
           D++  VS TGGHL SSLGV+EL VALH+VFN P+D+I+WDVGHQ YPHKILTGRR +MHT
Sbjct: 99  DIVHTVSNTGGHLSSSLGVVELAVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHT 158

Query: 164 MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 223
           +R+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N++++VIGDGA+TA
Sbjct: 159 IRKTSGLAGFPKRDESIHDAFGVGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGALTA 218

Query: 224 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 283
           GQAYEAMNNAG+LDS+MIV+LNDNKQVSLPTATLDGP  PVGALSSALS++Q++   R+L
Sbjct: 219 GQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPASPVGALSSALSKIQASAEFRKL 278

Query: 284 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 343
           RE AK +TKQIG   H++AAKVDEYARG+ISGS  T FEELGLYYIGPVDGH ++DLV I
Sbjct: 279 REAAKSITKQIGKQTHQVAAKVDEYARGIISGSACTFFEELGLYYIGPVDGHKIEDLVTI 338

Query: 344 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 403
            E+VK     GPVLIH VTEKG+GYP AEKA+DK HGV KFDP TG+QFK+ + T SYT 
Sbjct: 339 FEKVKAMPAPGPVLIHCVTEKGKGYPPAEKASDKMHGVVKFDPKTGEQFKAKSSTLSYTQ 398

Query: 404 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 463
           YFAE+LI EAE DK +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA E
Sbjct: 399 YFAESLIKEAENDKKIVAIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAE 458

Query: 464 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 523
           GLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD+T+MACL
Sbjct: 459 GLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYMACL 518

Query: 524 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 583
           PNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKGRIL
Sbjct: 519 PNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGATLPLNNKGTPLEIGKGRIL 578

Query: 584 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 643
           +EG R+A+LGYG+ VQ C  AS +L+  G+ +TVADARFCKPLD  LIR LAK HE+LIT
Sbjct: 579 VEGSRIAILGYGSVVQQCRQASEMLKELGVDVTVADARFCKPLDTGLIRLLAKEHEILIT 638

Query: 644 VEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 703
           VEEGSIGGFGSHV QFL+  G+LDG +KWR ++LPDRYI+HGSP  Q+  AGL+  HIAA
Sbjct: 639 VEEGSIGGFGSHVSQFLSLSGILDGPLKWRAMMLPDRYIEHGSPQAQVEDAGLSSKHIAA 698

Query: 704 TVFNILGQTREAL 716
           TV +++ + ++AL
Sbjct: 699 TVLSLMERPKQAL 711


>gi|326501314|dbj|BAJ98888.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 714

 Score = 1023 bits (2645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/653 (73%), Positives = 558/653 (85%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           EY S +P TPLLDTINYP+HMKNLS  +L+QL+ ELR +++  VSKTGGHL +SLGV+EL
Sbjct: 61  EYSSDKPETPLLDTINYPVHMKNLSTTDLEQLSAELRQEIVHTVSKTGGHLSASLGVVEL 120

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VF+ P+D+I+WDVGHQ+YPHKILTGRR +MHT+R+T GL+GF KR ES +D FG
Sbjct: 121 SVALHHVFDTPEDKIIWDVGHQSYPHKILTGRRSRMHTIRKTSGLAGFPKRDESAHDAFG 180

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMAV RDL+G+KN+V++VIGDGAMTAGQAYEAMNN+G+LDS+MIV+LN
Sbjct: 181 VGHSSTSISAALGMAVARDLQGKKNHVISVIGDGAMTAGQAYEAMNNSGFLDSNMIVVLN 240

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALS AL++LQS+   R LRE AK +TKQIGG  HE+AAKV
Sbjct: 241 DNKQVSLPTATLDGPSKPVGALSKALTKLQSSTKFRRLREAAKTITKQIGGSTHEVAAKV 300

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGH+++DLV I E+VK+    GPVLIH+VTEKG
Sbjct: 301 DEYARGMISASGSTLFEELGLYYIGPVDGHSLEDLVTIFEKVKSMPAPGPVLIHIVTEKG 360

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV KFDP TGKQFK+ + T SYT YFAE+LI EAE D  VVAIHAA
Sbjct: 361 KGYPPAEAAADKMHGVVKFDPTTGKQFKTKSPTLSYTQYFAESLIREAEGDDKVVAIHAA 420

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EG+KPFCAIYSSF+QR YDQVVH
Sbjct: 421 MGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGMKPFCAIYSSFLQRGYDQVVH 480

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDVT+MACLPNMVVMAP+DEAEL HMVATA 
Sbjct: 481 DVDLQRLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVATAN 540

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNG+G  LP  N+G P+EVGKGR+L+ G RVAL+GYGT VQ+CL A+
Sbjct: 541 AIDDRPSCFRFPRGNGVGAVLPLNNRGTPIEVGKGRVLVRGNRVALVGYGTMVQACLKAA 600

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
             L+ + L +TV DARFCKPLD  LIR LA  HE+LIT EEGSIGGFGSHV  +L+ +GL
Sbjct: 601 EALKEHDLSITVVDARFCKPLDTELIRELAAEHEILITAEEGSIGGFGSHVAHYLSLNGL 660

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LDG +K R + LPDRYIDHG+  DQ+  AGLTP HIAATV +++G+  EAL +
Sbjct: 661 LDGPLKLRSMFLPDRYIDHGAADDQMEAAGLTPRHIAATVLSLVGRPLEALHL 713


>gi|256619606|emb|CAZ66649.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum
           lycopersicum]
          Length = 714

 Score = 1023 bits (2645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/704 (70%), Positives = 577/704 (81%), Gaps = 10/704 (1%)

Query: 21  HKSSPVTSHFFGAALFSHFSHK--LDNHQIQLKKRPNGVCASLSERG----EYHSQRPPT 74
           H SSP    +     F +F+ K  L    +      NG      E+     ++  ++PPT
Sbjct: 14  HPSSP----YMKTPRFYNFTKKKFLVKASVNGSDEINGKIVRKEEKDSLQIDFSGEKPPT 69

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LDTINYP HMKNLS  +L+QLA ELRA+++++V+KTGGHL SSLGV++LTVALH+VF+
Sbjct: 70  PFLDTINYPKHMKNLSKMDLEQLAAELRAEIVYSVAKTGGHLSSSLGVVDLTVALHHVFD 129

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+D+I+WDVGHQ Y HKILTGRR KMHTMR+T GL+ F KR ES +D FG GHSSTSIS
Sbjct: 130 TPEDKIIWDVGHQAYAHKILTGRRSKMHTMRKTSGLAPFPKRDESVHDAFGAGHSSTSIS 189

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMAV RDL G  N+V++VIGDGAMTAGQAYEAMNNAG+LDS++IVILNDNKQVSLPT
Sbjct: 190 AGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPT 249

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
           ATLDGP  PVGALSSALS+LQ++   R+LRE AK +TKQIG   HE+AAKVDEYARGM+S
Sbjct: 250 ATLDGPATPVGALSSALSKLQASLKFRQLREAAKTITKQIGPQAHEVAAKVDEYARGMLS 309

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            SGSTLFEELGLYYIGPVDGHN++DL+ ILE+VK     GPVLIH+VTEKG+GY  AE A
Sbjct: 310 ASGSTLFEELGLYYIGPVDGHNIEDLITILEKVKALPAPGPVLIHIVTEKGKGYLPAEAA 369

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
            DK HGVA+FDP TGKQFK+ + T +YT YFAE+LI EAE D  +VAIHAAMGGGTGLN 
Sbjct: 370 DDKMHGVAQFDPKTGKQFKAKSPTLTYTQYFAESLIKEAENDNKIVAIHAAMGGGTGLNY 429

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPV
Sbjct: 430 FQKQFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPV 489

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
           RFAMDRAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCF
Sbjct: 490 RFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCF 549

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           R+PRGNGIG  L   NKGIP+EVGKGRIL EGERVA+LGYG+ +Q CL A+ +L S+ +R
Sbjct: 550 RFPRGNGIGAILSLNNKGIPIEVGKGRILREGERVAILGYGSIIQQCLGAADILNSHDIR 609

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
           + VADARFCKPLD  LIRSLAK HE+LITVEEGSIGGFGSHV  FL+ + +LDG +K R 
Sbjct: 610 VAVADARFCKPLDADLIRSLAKEHEILITVEEGSIGGFGSHVSHFLSLNSILDGPLKLRS 669

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           ++LPDRYIDHGSP DQ+  AGL+  HI++TV  +LG+ +EA+ +
Sbjct: 670 MLLPDRYIDHGSPVDQIEAAGLSSRHISSTVLTLLGRPKEAMVV 713


>gi|414883878|tpg|DAA59892.1| TPA: 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 727

 Score = 1022 bits (2643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/654 (74%), Positives = 565/654 (86%), Gaps = 1/654 (0%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++  ++PPTPLLDT+NYP+HMKNLSI EL+QLA ELRA+V+  VSKTGGHL SSLGV+EL
Sbjct: 73  DFSGEKPPTPLLDTVNYPLHMKNLSILELEQLAAELRAEVVHTVSKTGGHLSSSLGVVEL 132

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VF+ P+D+I+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR ES +D FG
Sbjct: 133 SVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 192

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMAV RDL GRKN+V++VIGDGAMTAGQAYEAMNN+GYLD++MIV+LN
Sbjct: 193 VGHSSTSISAALGMAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLN 252

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALS AL++LQS+   R LRE AK VTKQIGGP HE+AAKV
Sbjct: 253 DNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKV 312

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGS+LFEELGLYYIGPVDGH V+DLV I E+VK+    GPVLIH+VTEKG
Sbjct: 313 DEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTEKG 372

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KF+PATG+Q KS + T SYT YFAE+LI EAE D+ VVAIHAA
Sbjct: 373 KGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAIHAA 432

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 433 MGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVH 492

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDV +MACLPNMVVMAP+DEAEL HMVATAA
Sbjct: 493 DVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAA 552

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAA 604
           AIDDRPSCFR+PRGNG+G  LPPGNKG+ LEVG+GR+L+ G  RVALLGYG  VQ+CL A
Sbjct: 553 AIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGYGAMVQACLKA 612

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L+ + + +TVADARFCKPLD ALIR LA  HEVLIT EEGSIGGFGSHV  +L+  G
Sbjct: 613 AEALKEHDVYVTVADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGSHVAHYLSLTG 672

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LLDG +K R + LPDRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA+++
Sbjct: 673 LLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLEAMQL 726


>gi|145652154|gb|ABP88135.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 705

 Score = 1019 bits (2635), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/654 (74%), Positives = 565/654 (86%), Gaps = 1/654 (0%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++  ++PPTPLLDT+NYP+HMKNLSI EL+QLA ELRA+V+  VSKTGGHL SSLGV+EL
Sbjct: 51  DFSGEKPPTPLLDTVNYPLHMKNLSILELEQLAAELRAEVVHTVSKTGGHLSSSLGVVEL 110

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VF+ P+D+I+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR ES +D FG
Sbjct: 111 SVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 170

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMAV RDL GRKN+V++VIGDGAMTAGQAYEAMNN+GYLD++MIV+LN
Sbjct: 171 VGHSSTSISAALGMAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGYLDANMIVVLN 230

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALS AL++LQS+   R LRE AK VTKQIGGP HE+AAKV
Sbjct: 231 DNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKV 290

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGS+LFEELGLYYIGPVDGH V+DLV I E+VK+    GPVLIH+VTEKG
Sbjct: 291 DEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPVLIHIVTEKG 350

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KF+PATG+Q KS + T SYT YFAE+LI EAE D+ VVAIHAA
Sbjct: 351 KGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESDEKVVAIHAA 410

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 411 MGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVH 470

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDV +MACLPNMVVMAP+DEAEL HMVATAA
Sbjct: 471 DVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAA 530

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAA 604
           AIDDRPSCFR+PRGNG+G  LPPGNKG+ LEVG+GR+L+ G  RVALLGYG  VQ+CL A
Sbjct: 531 AIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGYGAMVQACLKA 590

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L+ + + +TVADARFCKPLD ALIR LA  HEVLIT EEGSIGGFGSHV  +L+  G
Sbjct: 591 AEALKEHDVYVTVADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGSHVAHYLSLTG 650

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LLDG +K R + LPDRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA+++
Sbjct: 651 LLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLEAMQL 704


>gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhinum majus]
          Length = 733

 Score = 1018 bits (2633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/671 (70%), Positives = 563/671 (83%)

Query: 51  KKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVS 110
           K+  NG    ++    +  ++P TP+LDTINYPIHMKNLS+ EL+ LADELR +++++VS
Sbjct: 63  KENLNGKNGRVARTLNFTGEKPSTPILDTINYPIHMKNLSLEELEILADELREELVYSVS 122

Query: 111 KTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGL 170
           KTGGHL SSLGV ELTVALH+VF+ P+D+I+WDVGHQ YPHKILTGRR KMHTMR+T GL
Sbjct: 123 KTGGHLSSSLGVAELTVALHHVFSTPEDKIIWDVGHQAYPHKILTGRRSKMHTMRKTFGL 182

Query: 171 SGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAM 230
           +GF KR ES +D FG GHSSTSISAGLGMAV RDL G  N+V++VIGDGAMTAGQAYEAM
Sbjct: 183 AGFPKREESVHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTAGQAYEAM 242

Query: 231 NNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV 290
           NNAGYLDS++I+ILNDNKQVSLPTAT+DGP PPVGAL+ AL+RLQ++R  R+LREVAK +
Sbjct: 243 NNAGYLDSNLIIILNDNKQVSLPTATVDGPAPPVGALTKALTRLQTSRKFRQLREVAKEL 302

Query: 291 TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT 350
           TKQIG   HE+AAKVD + RG+    G+ LFEELG+YYIGPVDGH+++DLV I +++K  
Sbjct: 303 TKQIGTEAHEVAAKVDSFVRGVAGSPGACLFEELGIYYIGPVDGHSIEDLVFIFKKIKEM 362

Query: 351 KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALI 410
              GPV+IH++TEKG+GYP AE AADK HGV KFDP TG+Q KS + T SYT YFAE+LI
Sbjct: 363 PAPGPVMIHIITEKGKGYPPAEVAADKMHGVVKFDPRTGQQKKSKSETLSYTQYFAESLI 422

Query: 411 AEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 470
           AEAE D  VVAIHAAMGGGTGLN+F +RFP R FDVGIAEQHAVTFAAGLA EGLKPFCA
Sbjct: 423 AEAEQDDKVVAIHAAMGGGTGLNIFQKRFPGRTFDVGIAEQHAVTFAAGLATEGLKPFCA 482

Query: 471 IYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMA 530
           IYSSF+QR YDQV HDVDLQKLPVRF MDRAGLVGADGPTHCG+FD T+MACLPNMVVMA
Sbjct: 483 IYSSFLQRGYDQVAHDVDLQKLPVRFIMDRAGLVGADGPTHCGAFDTTYMACLPNMVVMA 542

Query: 531 PSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVA 590
           PSDEAEL HM+ATAA IDDRPSC RYPRGNGIG  LPP NKG P+E+GKGRIL EG RVA
Sbjct: 543 PSDEAELMHMIATAAIIDDRPSCLRYPRGNGIGAVLPPNNKGTPMEIGKGRILREGSRVA 602

Query: 591 LLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIG 650
           +LG+GT +Q+CLAA+ LL+ + + +TVADARFCKPLD  LIR L K HEVLIT+EEGSIG
Sbjct: 603 ILGFGTIIQNCLAAADLLQEHRVSITVADARFCKPLDGDLIRQLVKEHEVLITIEEGSIG 662

Query: 651 GFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           GF SHV  FL  +GLLDG +KWR +VLPDRYIDHG+ +DQ+ +AGL+P HIAATV +++G
Sbjct: 663 GFSSHVSHFLCLNGLLDGNLKWRAMVLPDRYIDHGAQSDQIEEAGLSPRHIAATVLSLIG 722

Query: 711 QTREALEIMSF 721
           + +++L +M  
Sbjct: 723 EGKDSLHLMDL 733


>gi|449532138|ref|XP_004173040.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 694

 Score = 1017 bits (2630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/637 (75%), Positives = 554/637 (86%), Gaps = 1/637 (0%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           +Y  ++P TPLLDT+N+PIHMKNLS+++L++LA ELRA+++F+VSKTGGHL +SLGV+EL
Sbjct: 58  DYSGEKPATPLLDTVNFPIHMKNLSMQDLEKLAAELRAEIVFSVSKTGGHLSASLGVVEL 117

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
            VALH+VFN P D+I+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR ES +D FG
Sbjct: 118 AVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTLRQTSGLAGFPKRDESIHDAFG 177

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+KN+V++VIGDGAMTAGQAYEAMNNAGYLD++MIVILN
Sbjct: 178 AGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILN 237

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSSAL++LQ++   R+LRE AK +TKQIG   H +AAKV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKLREAAKTITKQIGKQTHGVAAKV 297

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMISGSGST FEELGLYYIGPVDGHNV DLV ILE+VK+    GPVLIH++TEKG
Sbjct: 298 DEYARGMISGSGSTFFEELGLYYIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTEKG 357

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV KFDP TGKQFK+ + T SYT YFAE+LI EAE+D  +VAIHAA
Sbjct: 358 KGYPPAEAAADKMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAIHAA 417

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EG+KPFCAIYSSF+QR +DQVVH
Sbjct: 418 MGGGTGLNYFQKKFPQRCFDVGIAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQVVH 477

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+MACLPNM+VMAP+DEAEL HMVATAA
Sbjct: 478 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPADEAELIHMVATAA 537

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            IDDRPSCFR+PRGNGIGV +PP  KG P+E+GKGRI++EG RVA+LGYG+ VQ C+ AS
Sbjct: 538 EIDDRPSCFRFPRGNGIGVVVPPNFKGTPIEIGKGRIVMEGTRVAILGYGSIVQQCVEAS 597

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            LL++ G+  TVADARFCKPLD  LIR LAK HE+LITVEEGSIGGFGSHV  FL+  G+
Sbjct: 598 ELLKTRGITPTVADARFCKPLDTQLIRQLAKEHEILITVEEGSIGGFGSHVSYFLSVTGI 657

Query: 666 LDG-TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
           LD   +K R +VLPDRYIDHGSP DQ+ +AGL+  HI
Sbjct: 658 LDQHHLKLRSMVLPDRYIDHGSPGDQMEEAGLSSEHI 694


>gi|374639395|gb|AEZ55686.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 713

 Score = 1015 bits (2625), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/653 (73%), Positives = 556/653 (85%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++  ++P TP+LDTIN+PIHMKNLS +EL+QLA ELR +++  V+KTGGHL SSLGV+EL
Sbjct: 60  DFSGEKPATPMLDTINHPIHMKNLSKKELEQLAAELRVEIVHTVAKTGGHLSSSLGVVEL 119

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALH+VFN P D+++WDVGHQ Y HKILTGRR KMHT+RQT GL+GF KR ES +D FG
Sbjct: 120 TVALHHVFNTPHDKLIWDVGHQAYGHKILTGRRSKMHTIRQTSGLAGFPKRDESVHDAFG 179

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAV RDL G+ N+VV+VIGDGAMTAGQAYEAMNNAG+LDS++I++LN
Sbjct: 180 VGHSSTSISAGLGMAVARDLLGKDNSVVSVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLN 239

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSSAL++LQ++   R+LRE AK +TKQIG   HE+AAKV
Sbjct: 240 DNKQVSLPTATLDGPATPVGALSSALTKLQASPKFRQLREAAKSITKQIGPQAHEVAAKV 299

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGM+S SGST FEELGLYYIGPVDGHN+DDLV I ++VK+    GPVLIH+VTEKG
Sbjct: 300 DEYARGMLSASGSTFFEELGLYYIGPVDGHNIDDLVTIFQKVKSMPAPGPVLIHIVTEKG 359

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AAD+ HGV KFDP TGKQ K+ + T SYT YFAE+LI EAE D  +VAIHAA
Sbjct: 360 KGYPPAEAAADRMHGVVKFDPCTGKQNKAKSSTLSYTQYFAESLIREAEADSKIVAIHAA 419

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR YDQVVH
Sbjct: 420 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQVVH 479

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT+MACLPNMVVMAPSDEAEL HMVATAA
Sbjct: 480 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTYMACLPNMVVMAPSDEAELIHMVATAA 539

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNG+G  LP  NKG P+E+GKGRI++EG RVA+LGYG AVQ C+ A+
Sbjct: 540 AIDDRPSCFRFPRGNGVGAPLPYNNKGTPIEIGKGRIVMEGSRVAILGYGAAVQQCIGAA 599

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L+S  +  T+ DARFCKPLD  LI  LAK HE+LITVEEGSIGGFGSHV  FL+ +GL
Sbjct: 600 EMLKSYDIAPTLVDARFCKPLDTHLITRLAKEHEILITVEEGSIGGFGSHVSHFLSLNGL 659

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           LDG +K R ++LPDRYI+HG+P DQ+ +AGLT  HI  TV +++G+  EAL++
Sbjct: 660 LDGHLKLRSMMLPDRYIEHGAPQDQIEEAGLTSRHICGTVLSLVGRPMEALKL 712


>gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate synthase (DXS) [Narcissus
           pseudonarcissus]
          Length = 709

 Score = 1014 bits (2623), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/652 (72%), Positives = 553/652 (84%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           Y  ++P  PLLDTIN P HMKNLS ++L+QLA ELR D++ +VSKTGGHL +SLGV++LT
Sbjct: 57  YSGEKPAVPLLDTINDPAHMKNLSTQDLEQLASELRLDIVHSVSKTGGHLSASLGVVDLT 116

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           V LH+VF+ P D+I+WDVGHQ Y HKILTGRR +MHT+RQT GL+GF KR ES +D FG 
Sbjct: 117 VVLHHVFDTPDDKIIWDVGHQAYAHKILTGRRSRMHTLRQTSGLAGFPKRDESVHDAFGA 176

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAV RDL G+ N+V++VIGDG MTAGQAYEAMNN GYLDS++IV+LND
Sbjct: 177 GHSSTSISAGLGMAVARDLLGKSNHVISVIGDGVMTAGQAYEAMNNVGYLDSNLIVVLND 236

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTATL+GP  PVGALS AL++LQ++   R+LRE AK +TKQIGG  HE+AAKVD
Sbjct: 237 NKQVSLPTATLNGPATPVGALSGALAKLQASAKFRQLREAAKCITKQIGGQAHEVAAKVD 296

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EYARGMIS SG++LFEELGLYYIGPVDGHNV+DLVAI ++VK   + GPVL+H+VTEKG+
Sbjct: 297 EYARGMISASGASLFEELGLYYIGPVDGHNVEDLVAIFKKVKAMPSPGPVLVHIVTEKGK 356

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GYP AE AADK HGV KFDP TGKQFK+   T SYT YFAE+L+ EAEVD+ +VAIHAAM
Sbjct: 357 GYPPAEAAADKMHGVVKFDPKTGKQFKTKFPTLSYTQYFAESLVKEAEVDEKIVAIHAAM 416

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHD
Sbjct: 417 GGGTGLNFFQKKFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHD 476

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFA+DRAGLVGADGPTHCG+FDVT+MACLPNM+VMAPSDEAEL HMVATAAA
Sbjct: 477 VDLQKLPVRFALDRAGLVGADGPTHCGAFDVTYMACLPNMIVMAPSDEAELMHMVATAAA 536

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFR+PRGNG+GV LP   KG PLE+GKGRIL+EG++VA+LGYG+ VQSCL A+ 
Sbjct: 537 IDDRPSCFRFPRGNGVGVALPSDYKGTPLEIGKGRILMEGDKVAILGYGSIVQSCLKAAG 596

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            L   G+  TVAD RFCKPLD  LIR L   HE+LITVEEGSIGGF SHV  FL+ +GLL
Sbjct: 597 SLRERGISATVADGRFCKPLDSELIRRLVNEHEILITVEEGSIGGFASHVSHFLSLNGLL 656

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           DG +K R +VLPDRYIDHG+P DQ+ +AGL+  HIA TV ++LG+  EA ++
Sbjct: 657 DGHLKLRSMVLPDRYIDHGAPKDQIEEAGLSSKHIAGTVLSLLGRPMEAFQL 708


>gi|186510290|ref|NP_850620.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
 gi|332642995|gb|AEE76516.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
          Length = 641

 Score = 1013 bits (2620), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/671 (73%), Positives = 556/671 (82%), Gaps = 54/671 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+++  +    K S ++S  +     + FS                    
Sbjct: 13  MALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFS-------------------- 52

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
             E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 53  --EKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 110

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE
Sbjct: 111 GVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESE 170

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+M
Sbjct: 171 HDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNM 230

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN                       
Sbjct: 231 IVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC---------------------- 268

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                     GMI  + STLFEELG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHV
Sbjct: 269 ----------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 318

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+V
Sbjct: 319 VTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 378

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 379 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 438

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+M
Sbjct: 439 DQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNM 498

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ 
Sbjct: 499 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQR 558

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 559 CLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 618

Query: 661 AQDGLLDGTVK 671
           A DGLLDG +K
Sbjct: 619 ALDGLLDGKLK 629


>gi|359485061|ref|XP_002271782.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 815

 Score = 1013 bits (2618), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/655 (72%), Positives = 552/655 (84%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++P TP+LDTINYPIHMKNLSI EL+ LA ELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 161 FSGEKPSTPVLDTINYPIHMKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAELT 220

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           +ALH+VF+ P+D+I+WDVGHQ Y HKILTGRR +MHT+RQT GL+GF KR ES YD FG 
Sbjct: 221 IALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFGA 280

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMA GRDL G+ NNV++VIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 281 GHSSTSISAGLGMAAGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 340

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N QVSLPTAT+DGP PPVGALS AL+ LQS+R  R+LRE AKG TK +GG  HE+AAKVD
Sbjct: 341 NGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKHVGGQAHEIAAKVD 400

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EY RG++ GS + LFEELGL YIGPVDGHNV+DLV IL +V+     GPVL+HV+TEKG+
Sbjct: 401 EYMRGIVGGSHACLFEELGLSYIGPVDGHNVEDLVHILTKVRVMPAPGPVLVHVITEKGK 460

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFD  +GKQ K+ ++T S+T YFAE+LIAEAE D+++VAIHAAM
Sbjct: 461 GYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTLSHTQYFAESLIAEAERDENIVAIHAAM 520

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL  EGLKPFCAIYSSF+QR +DQV HD
Sbjct: 521 GGGTGLNLFQKRFPDRCFDVGIAEQHAVTFAAGLDTEGLKPFCAIYSSFLQRGFDQVAHD 580

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS E+EL HMVATAAA
Sbjct: 581 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVATAAA 640

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYP GNGIG  LP  NKG PLE+GKGR+L EG RVA+LGYGT VQ+CLAA  
Sbjct: 641 IDDRPSCFRYPGGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTIVQNCLAAGK 700

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+  G+  TVADARFCKPLD  LIR LA+ HEVLITVEEGSIGGF SHV  FL  +GLL
Sbjct: 701 LLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGLNGLL 760

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           DG +KWRP++LPDRYI+HGS  +Q  +AGL+  HIAATV +++G+ +++L ++  
Sbjct: 761 DGKLKWRPMMLPDRYINHGSQTEQFEEAGLSSRHIAATVLSVMGENKDSLHLLKL 815


>gi|209529759|gb|ACI49774.1| At3g21500 [Arabidopsis thaliana]
          Length = 629

 Score = 1013 bits (2618), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/671 (73%), Positives = 556/671 (82%), Gaps = 54/671 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+++  +    K S ++S  +     + FS                    
Sbjct: 1   MALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFS-------------------- 40

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
             E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 41  --EKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 98

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE
Sbjct: 99  GVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESE 158

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+M
Sbjct: 159 HDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNM 218

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN                       
Sbjct: 219 IVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC---------------------- 256

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                     GMI  + STLFEELG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHV
Sbjct: 257 ----------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 306

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+V
Sbjct: 307 VTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 366

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 367 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 426

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+M
Sbjct: 427 DQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNM 486

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ 
Sbjct: 487 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQR 546

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 547 CLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 606

Query: 661 AQDGLLDGTVK 671
           A DGLLDG +K
Sbjct: 607 ALDGLLDGKLK 617


>gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [Mentha x piperita]
          Length = 724

 Score = 1012 bits (2616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/654 (70%), Positives = 559/654 (85%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++PP P+LDTINYP HMKNLS+ EL  LADELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 69  FTGEKPPIPILDTINYPNHMKNLSVEELANLADELREEIVYTVSKTGGHLSSSLGVSELT 128

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P D+I+WDVGHQ YPHKILTGRR +MHT+RQT GL+GF KR ES +D FG 
Sbjct: 129 VALHHVFNTPDDKIIWDVGHQAYPHKILTGRRARMHTIRQTFGLAGFPKRDESAHDAFGA 188

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAV RDL  + N+V++VIGDGAMTAGQAYEA+NNAG+LDS++I++LND
Sbjct: 189 GHSSTSISAGLGMAVARDLLQKNNHVISVIGDGAMTAGQAYEALNNAGFLDSNLIIVLND 248

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTAT+DGP PPVGALS AL++LQ++R  R+LRE AK +TKQ+G P HE+A+K+ 
Sbjct: 249 NKQVSLPTATVDGPAPPVGALSKALTKLQASRKFRQLREAAKSMTKQMGAPAHEIASKLT 308

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           +Y +GM+   G++LFEELG+YYIGPVDGHNV+DLV I ++VK     GPVLIH++TEKG+
Sbjct: 309 QYVKGMMGKPGASLFEELGIYYIGPVDGHNVEDLVYIFKKVKEMPAPGPVLIHIITEKGK 368

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GYP AE AADK HGV KFD  TGKQ K+  +T+SYT YFAE+L+AEAE D  +VAIHAAM
Sbjct: 369 GYPPAEIAADKMHGVVKFDAKTGKQMKTKNKTKSYTQYFAESLVAEAEHDDKIVAIHAAM 428

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLN+F ++FP RCFDVGIAEQHAVTFAAG+A EGLKPFCAIYSSF+QR YDQVVHD
Sbjct: 429 GGGTGLNIFQKQFPDRCFDVGIAEQHAVTFAAGMAAEGLKPFCAIYSSFLQRGYDQVVHD 488

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRF MDRAG+VGADGPTHCG+FD T+MACLPNMVVMAPSDEAEL +M+ATAA 
Sbjct: 489 VDLQKLPVRFMMDRAGVVGADGPTHCGAFDTTYMACLPNMVVMAPSDEAELMNMIATAAI 548

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSC RYPRGNGIGV LP  NKG PLE+GKGRIL EG +VA+LG+GT VQ+C+AA+ 
Sbjct: 549 IDDRPSCVRYPRGNGIGVALPSNNKGTPLEIGKGRILKEGSKVAILGFGTIVQNCMAAAN 608

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LLE +G+ +TVADARFCKPLD  LI+ L + HEVLITVEEGSIGGF +H+  FL+ +GLL
Sbjct: 609 LLEQHGISVTVADARFCKPLDGDLIKKLVQEHEVLITVEEGSIGGFSAHISHFLSLNGLL 668

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           DG +KWRP+VLPDRYIDHG+ +DQ+ +AGL+P HIA TV +++G  +++L +++
Sbjct: 669 DGNLKWRPMVLPDRYIDHGAQSDQIEEAGLSPKHIAGTVVSLIGGGKDSLHLIN 722


>gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
           thaliana]
          Length = 629

 Score = 1011 bits (2615), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/671 (73%), Positives = 556/671 (82%), Gaps = 54/671 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+++  +    K S ++S  +     + FS                    
Sbjct: 1   MALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFS-------------------- 40

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
             E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 41  --EKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 98

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE
Sbjct: 99  GVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESE 158

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+M
Sbjct: 159 HDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNM 218

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN                       
Sbjct: 219 IVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC---------------------- 256

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                     GMI  + STLFEELG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHV
Sbjct: 257 ----------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 306

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+V
Sbjct: 307 VTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 366

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 367 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 426

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FD+TFMACLPNM+VMAPSDEAELF+M
Sbjct: 427 DQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDMTFMACLPNMIVMAPSDEAELFNM 486

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ 
Sbjct: 487 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQR 546

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 547 CLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 606

Query: 661 AQDGLLDGTVK 671
           A DGLLDG +K
Sbjct: 607 ALDGLLDGKLK 617


>gi|147803271|emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera]
          Length = 1638

 Score = 1011 bits (2615), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/645 (74%), Positives = 548/645 (84%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++P TP+LDTINYPIH KNLSI EL+ LA ELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 81  FSGEKPSTPVLDTINYPIHTKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAELT 140

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           +ALH+VFN P DRI+WDVGHQ Y HKILTGRR +MHT+RQT GL+GF KR ES YD FG 
Sbjct: 141 IALHHVFNTPDDRIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFGA 200

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 201 GHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 260

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N QVSLPTAT+DGP PPVGALS AL+ LQS+R  R+LRE AKG TKQ+GG  HE+AAKVD
Sbjct: 261 NGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKQVGGQAHEIAAKVD 320

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EY RGM+ GS + LFEELGLYYIGPVDGHNV+DLV IL++V+     GPVL+HV+TEKG+
Sbjct: 321 EYMRGMVGGSNACLFEELGLYYIGPVDGHNVEDLVHILKKVRAMPAPGPVLVHVITEKGK 380

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFD  +GKQ K+ ++T+SYT YFAE+LIAEAE D++++AIHAAM
Sbjct: 381 GYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTRSYTQYFAESLIAEAERDENIIAIHAAM 440

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF + FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV HD
Sbjct: 441 GGGTGLNLFQKHFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGFDQVAHD 500

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS E+EL HMVATAAA
Sbjct: 501 VDLQKLPVRFAVDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVATAAA 560

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYPRGNGIG  LP  NKG PLE+GKGR+L EG RVA+LGYGT VQ+CLAAS 
Sbjct: 561 IDDRPSCFRYPRGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTVVQNCLAASK 620

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+  G+  TVADARFCKPLD  LIR LA+ HEVLITVEEGSIGGF SHV  FL  +GLL
Sbjct: 621 LLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGLNGLL 680

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           DG +KWRP++LPDRYI+HGS  +Q+ +AGL+  HIAAT   +  Q
Sbjct: 681 DGKLKWRPMMLPDRYINHGSQTEQVEEAGLSSRHIAATCCRLAYQ 725


>gi|154815951|emb|CAN89181.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
           truncatula]
          Length = 710

 Score = 1011 bits (2615), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/650 (72%), Positives = 559/650 (86%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           + +++PPTPLLDT+N+P+HMKNL+  +L+QLA ELRAD++ +VS TGGHL SSLGV+EL+
Sbjct: 59  FSAEKPPTPLLDTVNFPVHMKNLTTEDLEQLAAELRADIVHSVSDTGGHLSSSLGVVELS 118

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VF+ P D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES +D FG 
Sbjct: 119 VALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFGV 178

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMA+ RDL G+KN+V++VIGDGAMTAGQAYEA+NNAG+LDS++IVILND
Sbjct: 179 GHSSTSISAGLGMAIARDLLGKKNSVISVIGDGAMTAGQAYEALNNAGFLDSNLIVILND 238

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTATLDGP  PVGALSS LS++Q++R  R+LRE  K +TKQIGG  H +A+KVD
Sbjct: 239 NKQVSLPTATLDGPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKVD 298

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           +YAR  ISGSGS+LFEELG+YYIGP+DGHN++DLV I E+VK T  +GPVLIH+VTEKG+
Sbjct: 299 KYARDFISGSGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKATPASGPVLIHIVTEKGK 358

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GYP A  AAD+ HGV KFDP TG QFK    T +YT YFA++LI EAE+D  +VAIHAAM
Sbjct: 359 GYPPAVAAADRMHGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAM 418

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QR YDQVVHD
Sbjct: 419 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHD 478

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD+TFMACLPNM+VMAPSDEAEL +MVATAAA
Sbjct: 479 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAAA 538

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFR+PRGNGIG +LP  NKG PLE+GKGRIL+EG RVA+LGYG  VQ C+ A+ 
Sbjct: 539 IDDRPSCFRFPRGNGIGADLPLHNKGTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAAE 598

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           +L + G+ +TV+DARFCKPLD  LIR LA+ HE+LITVEEGSIGGFGSHV QFL+  GLL
Sbjct: 599 MLRAVGVYVTVSDARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQFLSLAGLL 658

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           DG +K R ++LPDRYIDHG+P DQ+ +AGL+  HI ATV ++L   +EAL
Sbjct: 659 DGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLEMPKEAL 708


>gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
           thaliana]
          Length = 629

 Score = 1011 bits (2615), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/671 (73%), Positives = 556/671 (82%), Gaps = 54/671 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+++  +    K S ++S  +     + FS                    
Sbjct: 1   MALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFS-------------------- 40

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
             E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 41  --EKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 98

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE
Sbjct: 99  GVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESE 158

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+M
Sbjct: 159 HDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNM 218

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN                       
Sbjct: 219 IVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC---------------------- 256

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                     GMI  + STLFEELG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHV
Sbjct: 257 ----------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 306

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+V
Sbjct: 307 VTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 366

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 367 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 426

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQ+LPVRFA+DRAGL+GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+M
Sbjct: 427 DQVVHDVDLQELPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNM 486

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ 
Sbjct: 487 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQR 546

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 547 CLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 606

Query: 661 AQDGLLDGTVK 671
           A DGLLDG +K
Sbjct: 607 ALDGLLDGKLK 617


>gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Medicago truncatula]
 gi|154815950|emb|CAN89180.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
           truncatula]
          Length = 711

 Score = 1011 bits (2613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/651 (72%), Positives = 556/651 (85%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
            + +++PPTPLLDT+N+P+HMKNL+  +L+QLA ELRAD++ +VS TGGHL SSLGV+EL
Sbjct: 58  NFSAEKPPTPLLDTVNFPVHMKNLTTEDLEQLAAELRADIVHSVSDTGGHLSSSLGVVEL 117

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VF+ P D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES +D FG
Sbjct: 118 SVALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFG 177

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAV RDL G+KN+V++VIGDGAMTAGQAYEAMNNAG++DS++IVILN
Sbjct: 178 VGHSSTSISAGLGMAVARDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILN 237

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNKQVSLPTATLDGP  PVGALSS LS++Q++R  R+LRE  K +TKQIGG  H +A+KV
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKV 297

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           D+YAR  ISGSGS+LFEELG+YYIGP+DGHN++DLV I E+VK     GPVLIH+VTEKG
Sbjct: 298 DKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKG 357

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP A  AAD+ HGV KFDP TG QFK    T +YT YFA++LI EAE+D  +VAIHAA
Sbjct: 358 KGYPPALAAADRMHGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAA 417

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 418 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVH 477

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+TFMACLPNM+VMAPSDEAEL +MVATAA
Sbjct: 478 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAA 537

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKGRIL+EG RVA+LGYG  VQ C+ A+
Sbjct: 538 AIDDRPSCFRFPRGNGIGANLPLNNKGTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAA 597

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L + G+ +TVADARFCKPLD  LIR LA+ HE+LITVEEGSIGGFGSHV QFL+  GL
Sbjct: 598 EMLRAVGVYVTVADARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQFLSLAGL 657

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           LDG +K R ++LPDRYIDHG+P DQ+ +AGL+  HI ATV ++L   +EAL
Sbjct: 658 LDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLDMPKEAL 708


>gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synthase, putative [Arabidopsis
           thaliana]
          Length = 628

 Score = 1010 bits (2612), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/671 (73%), Positives = 556/671 (82%), Gaps = 55/671 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+++  +    K S ++S  +     + FS                    
Sbjct: 1   MALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFS-------------------- 40

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
             E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 41  --EKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 98

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE
Sbjct: 99  GVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESE 158

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+M
Sbjct: 159 HDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNM 218

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSNR                      
Sbjct: 219 IVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNR---------------------- 256

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                     GMI  + STLFEELG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHV
Sbjct: 257 ----------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 306

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYH V KFDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+V
Sbjct: 307 VTEKGRGYPYAERADDKYH-VLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 365

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 366 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 425

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+M
Sbjct: 426 DQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNM 485

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ 
Sbjct: 486 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQR 545

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 546 CLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 605

Query: 661 AQDGLLDGTVK 671
           A DGLLDG +K
Sbjct: 606 ALDGLLDGKLK 616


>gi|297735323|emb|CBI17763.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score = 1010 bits (2611), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/655 (72%), Positives = 552/655 (84%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++P TP+LDTINYPIHMKNLSI EL+ LA ELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 36  FSGEKPSTPVLDTINYPIHMKNLSIGELETLAAELREEIVYTVSKTGGHLSSSLGVAELT 95

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           +ALH+VF+ P+D+I+WDVGHQ Y HKILTGRR +MHT+RQT GL+GF KR ES YD FG 
Sbjct: 96  IALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSRMHTIRQTCGLAGFPKRDESIYDAFGA 155

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMA GRDL G+ NNV++VIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 156 GHSSTSISAGLGMAAGRDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 215

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N QVSLPTAT+DGP PPVGALS AL+ LQS+R  R+LRE AKG TK +GG  HE+AAKVD
Sbjct: 216 NGQVSLPTATVDGPAPPVGALSKALTNLQSSRKFRQLREAAKGFTKHVGGQAHEIAAKVD 275

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EY RG++ GS + LFEELGL YIGPVDGHNV+DLV IL +V+     GPVL+HV+TEKG+
Sbjct: 276 EYMRGIVGGSHACLFEELGLSYIGPVDGHNVEDLVHILTKVRVMPAPGPVLVHVITEKGK 335

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFD  +GKQ K+ ++T S+T YFAE+LIAEAE D+++VAIHAAM
Sbjct: 336 GYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTLSHTQYFAESLIAEAERDENIVAIHAAM 395

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL  EGLKPFCAIYSSF+QR +DQV HD
Sbjct: 396 GGGTGLNLFQKRFPDRCFDVGIAEQHAVTFAAGLDTEGLKPFCAIYSSFLQRGFDQVAHD 455

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS E+EL HMVATAAA
Sbjct: 456 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCESELMHMVATAAA 515

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYP GNGIG  LP  NKG PLE+GKGR+L EG RVA+LGYGT VQ+CLAA  
Sbjct: 516 IDDRPSCFRYPGGNGIGSILPQNNKGTPLEIGKGRVLKEGSRVAILGYGTIVQNCLAAGK 575

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+  G+  TVADARFCKPLD  LIR LA+ HEVLITVEEGSIGGF SHV  FL  +GLL
Sbjct: 576 LLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEVLITVEEGSIGGFSSHVSHFLGLNGLL 635

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           DG +KWRP++LPDRYI+HGS  +Q  +AGL+  HIAATV +++G+ +++L ++  
Sbjct: 636 DGKLKWRPMMLPDRYINHGSQTEQFEEAGLSSRHIAATVLSVMGENKDSLHLLKL 690


>gi|186510292|ref|NP_566686.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
 gi|332642996|gb|AEE76517.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
          Length = 640

 Score = 1007 bits (2604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/671 (73%), Positives = 555/671 (82%), Gaps = 55/671 (8%)

Query: 1   MALSAFSFPTYVSKATNSGPHKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCAS 60
           MALS F+FP+Y+++  +    K S ++S  +     + FS                    
Sbjct: 13  MALSVFAFPSYINRNPSLKYLKPSSMSSTKYSKVRATTFS-------------------- 52

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
             E+GEY+S RPPTPLLDTIN+P+HMKNLSI+ELK L+DELR+DVIFNVSKTGGHLGS+L
Sbjct: 53  --EKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNL 110

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELTVALHY+FN P D+ILWDVGHQ+YPHKILTGRR KM T+RQT+GLSG+TKR ESE
Sbjct: 111 GVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESE 170

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGAMTAGQAYEAMNNAGYL S+M
Sbjct: 171 HDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNM 230

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN                       
Sbjct: 231 IVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC---------------------- 268

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
                     GMI  + STLFEELG +Y+GPVDGHN+DDLV+ILE +K+TKT GPVLIHV
Sbjct: 269 ----------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHV 318

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           VTEKGRGYPYAE+A DKYH V KFDP TGKQFK+ ++TQSYT+ F EALIAEAE DKD+V
Sbjct: 319 VTEKGRGYPYAERADDKYH-VLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 377

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC IYSSFMQRAY
Sbjct: 378 AIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAY 437

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFMACLPNM+VMAPSDEAELF+M
Sbjct: 438 DQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNM 497

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           VATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+GRIL +GERVALLGYG+AVQ 
Sbjct: 498 VATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQR 557

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
Sbjct: 558 CLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 617

Query: 661 AQDGLLDGTVK 671
           A DGLLDG +K
Sbjct: 618 ALDGLLDGKLK 628


>gi|356564868|ref|XP_003550669.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 728

 Score = 1007 bits (2604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/685 (68%), Positives = 564/685 (82%), Gaps = 3/685 (0%)

Query: 38  HFSHKLDNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQL 97
           +F  ++++  ++    PN     L     +  ++P TP+LDTINYPIHMKNLSI+EL++L
Sbjct: 46  NFCEEMNSTMMKKSYEPN---QQLRRSLNFSGEKPSTPVLDTINYPIHMKNLSIQELEEL 102

Query: 98  ADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGR 157
           ADELR ++++ +SKTGGHL SSLGV ELTVALH+VFN P+D+I+WDVGH+TY HKILTGR
Sbjct: 103 ADELREEIVYTLSKTGGHLSSSLGVAELTVALHHVFNTPQDKIVWDVGHRTYAHKILTGR 162

Query: 158 RDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIG 217
           R KMHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL G+ N+V++VIG
Sbjct: 163 RSKMHTIRQTGGLAGFPKRDESLHDAFGVGHSSTSISASLGMAVARDLIGKDNHVISVIG 222

Query: 218 DGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN 277
           DGAMT GQAYEAMNNAG+LD+++I+ILNDN+QVSLPTAT+DGP PPVGALS AL+RL ++
Sbjct: 223 DGAMTGGQAYEAMNNAGFLDTNLIIILNDNEQVSLPTATIDGPAPPVGALSRALARLNTS 282

Query: 278 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 337
               +LR++AKG+TKQIG   +E  +K+D Y RGM+ G+G+ LFEELGL+YIGPVDGH++
Sbjct: 283 SKFHQLRDLAKGITKQIGSRAYEFTSKLDSYLRGMVGGAGACLFEELGLFYIGPVDGHDI 342

Query: 338 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 397
           +DLV IL+ VK   T GPVLIHV+TEKG+GY  AE A DK HGV KFDP +GKQ KS A 
Sbjct: 343 EDLVHILKSVKGMPTLGPVLIHVITEKGKGYHPAEVAPDKMHGVVKFDPKSGKQLKSKAS 402

Query: 398 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 457
           T+SYT YFAE+L AEAEVD+ +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFA
Sbjct: 403 TRSYTQYFAESLTAEAEVDEKIVAIHAAMGGGTGLNLFQKRFPERCFDVGIAEQHAVTFA 462

Query: 458 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 517
           AGLA EGLKPFCAIYSSF+QR YDQV HDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD 
Sbjct: 463 AGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDT 522

Query: 518 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 577
           TFMACLPNMVVMAPSDE EL HM+ATAAAIDDRPSCFRYPRGNGIG  LPP NKG PLEV
Sbjct: 523 TFMACLPNMVVMAPSDETELMHMIATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPLEV 582

Query: 578 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 637
           GKGR+L EG RVAL+GYGT VQSC+ A+ +LE++G+  TV DARFCKPLD  L+R LA+ 
Sbjct: 583 GKGRVLKEGSRVALVGYGTMVQSCMEAAKVLEAHGISTTVVDARFCKPLDGDLMRRLARE 642

Query: 638 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 697
           HE+LITVEEGSIGGFGSHV  FL  +GLLDG +KWR L LPDRYI+HGS  DQ+  AGL+
Sbjct: 643 HEILITVEEGSIGGFGSHVSHFLGLNGLLDGNLKWRALTLPDRYINHGSQTDQIQMAGLS 702

Query: 698 PSHIAATVFNILGQTREALEIMSFK 722
            +HIA T  ++     ++  ++S +
Sbjct: 703 SNHIAVTALSLTNVHWDSRLLLSLQ 727


>gi|297735368|emb|CBI17808.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/656 (72%), Positives = 550/656 (83%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++P T +LDTIN+P HMKNLSI EL+ LADELR ++++ VSKTGGHL +SLGV ELT
Sbjct: 153 FSGEKPSTSILDTINHPKHMKNLSIEELEMLADELREELVYVVSKTGGHLSASLGVAELT 212

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P D+I+WDVGHQ YPHKILT RR +MHT+RQT GL+GF KR ES +D FG 
Sbjct: 213 VALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGLAGFPKRDESVHDAFGA 272

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAV RDL  + N+V+AVIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 273 GHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 332

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N QVSLPTAT DGP PPVGALS AL RLQS+R  ++L + AK +T+++GG  HE+AAKVD
Sbjct: 333 NNQVSLPTATADGPAPPVGALSKALKRLQSSRKFQQLHQTAKAITERVGGQAHEIAAKVD 392

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
            Y RGMI+G G+  FEELGL+YIGPVDGHN+++LV IL+ VK     G VLIH+VTEKG+
Sbjct: 393 LYLRGMINGLGACFFEELGLHYIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTEKGK 452

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE A DK HGV KFDP +GKQ KS + T SYT YFAE+LIAEAE D  +VAIHAAM
Sbjct: 453 GYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAIHAAM 512

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QRA+DQVVHD
Sbjct: 513 GGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQVVHD 572

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS E EL +MVATAAA
Sbjct: 573 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCERELMNMVATAAA 632

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYPRGNGIG  +PP NKG PLEVGKGR+L EG RVA+LGYGT VQSC+AAS 
Sbjct: 633 IDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKGRVLEEGTRVAILGYGTIVQSCVAASH 692

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+  G+  TV DARFCKPLD  LIR LA+ HEVL+TVEEGSIGGFGSHV  FLA +GLL
Sbjct: 693 LLQRFGISATVVDARFCKPLDGDLIRQLAREHEVLLTVEEGSIGGFGSHVSHFLALNGLL 752

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFK 722
           DGT+KWR ++LPDRYIDHGS  +Q+ +AGLT  HIAATV  ++G+ ++AL  +  K
Sbjct: 753 DGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKHIAATVLALIGENKDALHQLKLK 808


>gi|225446107|ref|XP_002270336.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 731

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/656 (72%), Positives = 550/656 (83%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++P T +LDTIN+P HMKNLSI EL+ LADELR ++++ VSKTGGHL +SLGV ELT
Sbjct: 76  FSGEKPSTSILDTINHPKHMKNLSIEELEMLADELREELVYVVSKTGGHLSASLGVAELT 135

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P D+I+WDVGHQ YPHKILT RR +MHT+RQT GL+GF KR ES +D FG 
Sbjct: 136 VALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGLAGFPKRDESVHDAFGA 195

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAV RDL  + N+V+AVIGDGAMTAGQAYEAMNNAGYLDS++I+ILND
Sbjct: 196 GHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIILND 255

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N QVSLPTAT DGP PPVGALS AL RLQS+R  ++L + AK +T+++GG  HE+AAKVD
Sbjct: 256 NNQVSLPTATADGPAPPVGALSKALKRLQSSRKFQQLHQTAKAITERVGGQAHEIAAKVD 315

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
            Y RGMI+G G+  FEELGL+YIGPVDGHN+++LV IL+ VK     G VLIH+VTEKG+
Sbjct: 316 LYLRGMINGLGACFFEELGLHYIGPVDGHNMEELVHILKVVKAIPGQGAVLIHIVTEKGK 375

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE A DK HGV KFDP +GKQ KS + T SYT YFAE+LIAEAE D  +VAIHAAM
Sbjct: 376 GYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLSYTQYFAESLIAEAERDDKIVAIHAAM 435

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QRA+DQVVHD
Sbjct: 436 GGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAFDQVVHD 495

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS E EL +MVATAAA
Sbjct: 496 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCERELMNMVATAAA 555

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPSCFRYPRGNGIG  +PP NKG PLEVGKGR+L EG RVA+LGYGT VQSC+AAS 
Sbjct: 556 IDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKGRVLEEGTRVAILGYGTIVQSCVAASH 615

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+  G+  TV DARFCKPLD  LIR LA+ HEVL+TVEEGSIGGFGSHV  FLA +GLL
Sbjct: 616 LLQRFGISATVVDARFCKPLDGDLIRQLAREHEVLLTVEEGSIGGFGSHVSHFLALNGLL 675

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFK 722
           DGT+KWR ++LPDRYIDHGS  +Q+ +AGLT  HIAATV  ++G+ ++AL  +  K
Sbjct: 676 DGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKHIAATVLALIGENKDALHQLKLK 731


>gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes erecta]
          Length = 725

 Score = 1004 bits (2595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/655 (70%), Positives = 554/655 (84%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           +Y   +P TP+LDTINYPIHMKNL + EL +LADELR ++++ VSKTGGHL SSLGV+EL
Sbjct: 70  KYSGDKPKTPILDTINYPIHMKNLCVEELVKLADELREEIVYTVSKTGGHLSSSLGVVEL 129

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TV+LH+VFN P+D+I+WDVGHQ YPHKILTGRR +M T+RQT GL+GF KR ES +D FG
Sbjct: 130 TVSLHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMRTIRQTFGLAGFPKRDESNHDAFG 189

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRDL G+ N+V+AVIGDGAMTAGQAYEAMNNAGYLDS++I++LN
Sbjct: 190 AGHSSTSISAGLGMAVGRDLLGKNNHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIIVLN 249

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN+QVSLPTAT+DGP PPVGALS +L+RLQ+++  R+LRE AK VTKQ+G   HE+AAK+
Sbjct: 250 DNRQVSLPTATIDGPAPPVGALSRSLTRLQTSQKFRQLREAAKEVTKQLGDKTHEVAAKM 309

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           D   +GM+ G G+++FEELGLYY+GPVDGHN++DLV + +++K+    GPVL+H+VTEKG
Sbjct: 310 DSLVKGMVGGQGASMFEELGLYYVGPVDGHNLEDLVYVFDKIKSMTAPGPVLVHIVTEKG 369

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV KFD  TGKQ K+  +T SYT YF ++L+AEA+ D  +VAIHAA
Sbjct: 370 KGYPPAEVAADKMHGVVKFDTQTGKQKKNKTKTLSYTQYFVDSLVAEAKEDDKIVAIHAA 429

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F + FP RCFDVGIAEQHA+TFAAGLA EGLKPFCAIYSSF+QR YDQVVH
Sbjct: 430 MGGGTGLNTFQKEFPARCFDVGIAEQHAITFAAGLATEGLKPFCAIYSSFLQRGYDQVVH 489

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS EAEL +MVATA 
Sbjct: 490 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSCEAELMNMVATAV 549

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFRYPRGNGIG  LP  NKG  +EVG GR++ EG RVALLGYGT VQSCLAAS
Sbjct: 550 AIDDRPSCFRYPRGNGIGSILPANNKGTLIEVGTGRVIKEGNRVALLGYGTIVQSCLAAS 609

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L+  G+ +TVADARFCKPLD  LI+ LA  HEVLITVEEGSIGGF SHV  FLA +GL
Sbjct: 610 EVLKKIGISVTVADARFCKPLDGNLIKQLANEHEVLITVEEGSIGGFSSHVSHFLALNGL 669

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           LDG +KWR ++LPDRYI+HG+ +DQ+ +AGL+  HIAATV +++G ++E L  ++
Sbjct: 670 LDGHLKWRAMMLPDRYIEHGAQSDQIEEAGLSSKHIAATVLSLIGGSKETLHALN 724


>gi|449457233|ref|XP_004146353.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/656 (71%), Positives = 557/656 (84%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++   +P TP+LDTINYPIHMKNLSI EL++L++E+R ++++ VSKTGGHL SSLGV EL
Sbjct: 66  KFTGDKPSTPILDTINYPIHMKNLSIEELQELSNEIREEIVYTVSKTGGHLSSSLGVAEL 125

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALH+VF  P+D+I+WDVGHQ Y HK+LTGRR +MHT+RQT GL+GF KR ES +D FG
Sbjct: 126 TVALHHVFATPEDKIIWDVGHQAYAHKMLTGRRGRMHTIRQTFGLAGFPKREESVHDAFG 185

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAVGRD+ G+ N+VV+VIGDGAMT G AYEA+NNAGYLDS++IVILN
Sbjct: 186 VGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGAMTGGMAYEALNNAGYLDSNLIVILN 245

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN+QVSLPTAT+DGP  PVGAL+ AL++LQ+++ LR+LRE AK V+KQ+GG  H +AAKV
Sbjct: 246 DNRQVSLPTATIDGPATPVGALNKALTKLQASKKLRQLREAAKAVSKQMGGETHGIAAKV 305

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +   RGM+ G+G++LFEELG+YYIGPVDGHNV+DLV IL++VK    +GPVLIHV+TEKG
Sbjct: 306 EHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDLVYILKQVKAMPASGPVLIHVITEKG 365

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GYP AE AADK HGV  FDP +GKQ K    T SYT YFA++LIAEAE D  +VAIHAA
Sbjct: 366 KGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLSYTQYFADSLIAEAERDDKIVAIHAA 425

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QRAYDQV H
Sbjct: 426 MGGGTGLNYFQKQFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAYDQVAH 485

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS+EAEL +MVATAA
Sbjct: 486 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNEAELMNMVATAA 545

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRPSCFRYPRGNGIG  LP  NKG PLEVGKGRIL EG RVA+LGYGT VQSCLAA+
Sbjct: 546 AIDDRPSCFRYPRGNGIGCVLPLNNKGTPLEVGKGRILREGNRVAILGYGTIVQSCLAAA 605

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L+  G+++TVADARFCKPLD  L++ LA+ HE+L+TVEEGSIGGF SHV  FL  +GL
Sbjct: 606 NVLQEYGIQITVADARFCKPLDGELVKQLARQHEILLTVEEGSIGGFSSHVSHFLGLNGL 665

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           LDG +KWR LVLPDRYIDHGS  DQ  +AGL+   IAATV +++G+ ++  ++++ 
Sbjct: 666 LDGNLKWRALVLPDRYIDHGSQKDQTQEAGLSWKDIAATVLSLIGKGKDCFQLVNL 721


>gi|357517205|ref|XP_003628891.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355522913|gb|AET03367.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 736

 Score =  996 bits (2576), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/677 (69%), Positives = 559/677 (82%), Gaps = 26/677 (3%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
            + +++PPTPLLDT+N+P+HMKNL+  +L+QLA ELRAD++ +VS TGGHL SSLGV+EL
Sbjct: 58  NFSAEKPPTPLLDTVNFPVHMKNLTTEDLEQLAAELRADIVHSVSDTGGHLSSSLGVVEL 117

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           +VALH+VF+ P D+I+WDVGHQ YPHKILTGRR +MHT+R+T GL+GF KR ES +D FG
Sbjct: 118 SVALHHVFDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVHDAFG 177

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMA+ RDL G+KN+V++VIGDGAMTAGQAYEA+NNAG+LDS++IVILN
Sbjct: 178 VGHSSTSISAGLGMAIARDLLGKKNSVISVIGDGAMTAGQAYEALNNAGFLDSNLIVILN 237

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK----------------- 288
           DNKQVSLPTATLDGP  PVGALSS LS++Q++R  R+LRE  K                 
Sbjct: 238 DNKQVSLPTATLDGPATPVGALSSTLSKIQASRKFRKLREATKVSPFRPLYYSKTSIPFW 297

Query: 289 ---------GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 339
                     +TKQIGG  H +A+KVD+YAR  ISGSGS+LFEELG+YYIGP+DGHN++D
Sbjct: 298 NLTLIYLLQNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMYYIGPMDGHNIED 357

Query: 340 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 399
           LV I E+VK T  +GPVLIH+VTEKG+GYP A  AAD+ HGV KFDP TG QFK    T 
Sbjct: 358 LVNIFEKVKATPASGPVLIHIVTEKGKGYPPAVAAADRMHGVVKFDPKTGHQFKPKPSTL 417

Query: 400 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 459
           +YT YFA++LI EAE+D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAG
Sbjct: 418 AYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAG 477

Query: 460 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 519
           LA EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+TF
Sbjct: 478 LATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITF 537

Query: 520 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 579
           MACLPNM+VMAPSDEAEL +MVATAAAIDDRPSCFR+PRGNGIG +LP  NKG PLE+GK
Sbjct: 538 MACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPRGNGIGADLPLHNKGTPLEIGK 597

Query: 580 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 639
           GRIL+EG RVA+LGYG  VQ C+ A+ +L + G+ +TV+DARFCKPLD  LIR LA+ HE
Sbjct: 598 GRILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVSDARFCKPLDTDLIRLLAREHE 657

Query: 640 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 699
           +LITVEEGSIGGFGSHV QFL+  GLLDG +K R ++LPDRYIDHG+P DQ+ +AGL+  
Sbjct: 658 ILITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSK 717

Query: 700 HIAATVFNILGQTREAL 716
           HI ATV ++L   +EAL
Sbjct: 718 HILATVLSLLEMPKEAL 734


>gi|291170708|gb|ADD82535.1| 1-deoxyxylulose-5-phosphate synthase [Narcissus tazetta var.
           chinensis]
          Length = 634

 Score =  993 bits (2567), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/633 (74%), Positives = 540/633 (85%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MKNLS ++L+QLA ELR D++ +VSKTGGHL +SLGV++LTVALH+VFN P D+I+WDVG
Sbjct: 1   MKNLSTQDLEQLASELRLDIVHSVSKTGGHLSASLGVVDLTVALHHVFNTPDDKIIWDVG 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQ Y HKILTGRR +MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL
Sbjct: 61  HQAYAHKILTGRRSRMHTLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDL 120

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVG 265
            G+ N+V++VIGDGAMTAGQAYEAMNNAGYLDS++IV+LNDNKQVSLPTATLDGP  PVG
Sbjct: 121 LGKGNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIVVLNDNKQVSLPTATLDGPATPVG 180

Query: 266 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 325
           ALS AL++LQ++   R+LRE AK +TKQIGG  HE+AAKVDEYARGMIS SG+ LFEELG
Sbjct: 181 ALSGALAKLQASTKFRQLREAAKSITKQIGGQAHEVAAKVDEYARGMISASGACLFEELG 240

Query: 326 LYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFD 385
           LYYIGPVDGHNV+DLVAI ++VK   + GPVLIH+VTEKG+GYP AE AADK HGV KFD
Sbjct: 241 LYYIGPVDGHNVEDLVAIFKKVKAMPSRGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFD 300

Query: 386 PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFD 445
           P TGKQFK+   T SYT YFAE+L+ EAEVD  ++AIHAAMGGGTGLN F ++FP RCFD
Sbjct: 301 PKTGKQFKTKFPTLSYTQYFAESLVKEAEVDDKIIAIHAAMGGGTGLNFFQKKFPDRCFD 360

Query: 446 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 505
           VGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVG
Sbjct: 361 VGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVG 420

Query: 506 ADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE 565
           ADGPTHCG+FDVT+MACLPNM+VMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNG+GV 
Sbjct: 421 ADGPTHCGAFDVTYMACLPNMIVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGVGVA 480

Query: 566 LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 625
           LP   KG PLE+GKGRIL EGERVA+LGYG+ VQSCL A+ LL  +G+  TVAD RFCKP
Sbjct: 481 LPSDYKGTPLEIGKGRILREGERVAILGYGSIVQSCLKAADLLREHGISATVADGRFCKP 540

Query: 626 LDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 685
           LD  LIR L   HE+LIT EEGSIGGF SHV  FL+ +GLLDG +K R +VLPDRYIDHG
Sbjct: 541 LDSELIRRLVNEHEILITAEEGSIGGFASHVSHFLSLNGLLDGHLKLRSMVLPDRYIDHG 600

Query: 686 SPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +  DQ+ +AGL+  HIA TV ++LG+  EA ++
Sbjct: 601 ALKDQIEEAGLSSKHIAGTVLSLLGRPMEAFQL 633


>gi|147855372|emb|CAN83878.1| hypothetical protein VITISV_003880 [Vitis vinifera]
          Length = 713

 Score =  988 bits (2555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/684 (71%), Positives = 558/684 (81%), Gaps = 9/684 (1%)

Query: 48  IQLKKRPNGVCASLSER---------GEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLA 98
           +  KKR   V AS  +          G   S++P T +LDTIN+P HMKNLSI EL+ LA
Sbjct: 30  LHCKKRKLNVVASAQDHXADEDKNNPGAMSSEKPSTSILDTINHPKHMKNLSIEELEMLA 89

Query: 99  DELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRR 158
           DELR ++++ VSKTGGHL +SLGV ELTVALH+VFN P D+I+WDVGHQ YPHKILT RR
Sbjct: 90  DELREELVYVVSKTGGHLSASLGVAELTVALHHVFNTPDDKIIWDVGHQAYPHKILTARR 149

Query: 159 DKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGD 218
            +MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL  + N+V+AVIGD
Sbjct: 150 SRMHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLRKNNHVIAVIGD 209

Query: 219 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 278
           GAMTAGQAYEAMNNAGYLDS+ I+ILNDN QVSLPTAT DGP PPVGALS AL RLQS+R
Sbjct: 210 GAMTAGQAYEAMNNAGYLDSNXIIILNDNNQVSLPTATADGPAPPVGALSKALKRLQSSR 269

Query: 279 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 338
             ++L + AK +T+++GG  HE+AAKVD Y RGMI+G G+  FEELGL+YIGPVDGHN++
Sbjct: 270 KFQQLHQTAKAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLHYIGPVDGHNME 329

Query: 339 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 398
           +LV IL+ VK     G VLIH+VTEKG+GY  AE A DK HGV KFDP +GKQ KS + T
Sbjct: 330 ELVHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSST 389

Query: 399 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 458
            SYT YFAE+LIAEAE D  +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAA
Sbjct: 390 LSYTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAA 449

Query: 459 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 518
           GLA EGLKPFCAIYSSF+QRA+DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD T
Sbjct: 450 GLATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTT 509

Query: 519 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 578
           FMACLPNMVVMAPS E EL +MVATAAAIDDRPSCFRYPRGNGIG  +PP NKGIPLEVG
Sbjct: 510 FMACLPNMVVMAPSCERELMNMVATAAAIDDRPSCFRYPRGNGIGSIIPPFNKGIPLEVG 569

Query: 579 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 638
           KGR+L EG RVA+LGYGT VQSC+AAS LL+  G+  TV DARFCKPLD  LIR LA  H
Sbjct: 570 KGRVLEEGTRVAILGYGTIVQSCVAASHLLQRFGISATVVDARFCKPLDGDLIRQLALEH 629

Query: 639 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 698
           EVL+TVEEGSIGGFGSHV  FLA +GLLDGT+KWR ++LPDRYIDHGS  +Q+ +AGLT 
Sbjct: 630 EVLLTVEEGSIGGFGSHVSHFLALNGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTS 689

Query: 699 SHIAATVFNILGQTREALEIMSFK 722
            HIAATV  ++G+ ++AL  +  K
Sbjct: 690 KHIAATVLALIGENKDALHQLKLK 713


>gi|449500270|ref|XP_004161053.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 724

 Score =  987 bits (2552), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/659 (70%), Positives = 554/659 (84%), Gaps = 3/659 (0%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           ++   +P TP+LDTINYPIHMKNLSI EL++L++E+R ++++ VSKTGGHL SSLGV EL
Sbjct: 66  KFTGDKPSTPILDTINYPIHMKNLSIEELQELSNEIREEIVYTVSKTGGHLSSSLGVAEL 125

Query: 126 TVALHYVFNAPKDRILWDVGH---QTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           TVALH+VF  P+D+I+WD  +     Y HK+LTGRR +MHT+RQT GL+GF KR ES +D
Sbjct: 126 TVALHHVFATPEDKIIWDFSYLYLXAYAHKMLTGRRGRMHTIRQTFGLAGFPKREESVHD 185

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
            FG GHSSTSISAGLGMAVGRD+ G+ N+VV+VIGDGAMT G AYEA+NNAGYLDS++IV
Sbjct: 186 AFGVGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGAMTGGMAYEALNNAGYLDSNLIV 245

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN+QVSLPTAT+DGP  PVGAL+ AL++LQ+++ LR+LRE AK V+KQ+GG  H +A
Sbjct: 246 ILNDNRQVSLPTATIDGPATPVGALNKALTKLQASKKLRQLREAAKAVSKQMGGETHGIA 305

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           AKV+   RGM+ G+G++LFEELG+YYIGPVDGHNV+DLV IL++VK    +GPVLIHV+T
Sbjct: 306 AKVEHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDLVYILKQVKAMPASGPVLIHVIT 365

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           EKG+GYP AE AADK HGV  FDP +GKQ K    T SYT YFA++LIAEAE D  +VAI
Sbjct: 366 EKGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLSYTQYFADSLIAEAERDDKIVAI 425

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
           HAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QRAYDQ
Sbjct: 426 HAAMGGGTGLNYFQKQFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAYDQ 485

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           V HDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFMACLPNMVVMAPS+EAEL +MVA
Sbjct: 486 VAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNEAELMNMVA 545

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCL 602
           TAAAIDDRPSCFRYPRGNGIG  LP  NKG PLEVGKGRIL EG RVA+LGYGT VQSCL
Sbjct: 546 TAAAIDDRPSCFRYPRGNGIGCVLPLNNKGTPLEVGKGRILREGNRVAILGYGTIVQSCL 605

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
           AA+ +L+  G+++TVADARFCKPLD  L++ LA+ HE+L+TVEEGSIGGF SHV  FL  
Sbjct: 606 AAANVLQEYGIQITVADARFCKPLDGELVKQLARQHEILLTVEEGSIGGFSSHVSHFLGL 665

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           +GLLDG +KWR LVLPDRYIDHGS  DQ  +AGL+   IAATV +++G+ ++  ++++ 
Sbjct: 666 NGLLDGNLKWRALVLPDRYIDHGSQKDQTQEAGLSWKDIAATVLSLIGKGKDCFQLVNL 724


>gi|374498909|gb|AEZ53173.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rosa rugosa]
          Length = 523

 Score =  985 bits (2546), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/523 (91%), Positives = 506/523 (96%)

Query: 199 MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD 258
           MAVGRDLKG+ N+VVAVIGDGAMTAGQAYEAMNNAGYLDSDMI+ILNDNKQVSLPTA LD
Sbjct: 1   MAVGRDLKGKNNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIIILNDNKQVSLPTANLD 60

Query: 259 GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS 318
           GPIPPVGALSSALS+LQSNRPLRELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGS
Sbjct: 61  GPIPPVGALSSALSKLQSNRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGS 120

Query: 319 TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKY 378
           TLFEELGLYYIGPVDGHNVDDL+AIL+EVK T+TTGPVLIH++TEKGRGYPYAEKAADKY
Sbjct: 121 TLFEELGLYYIGPVDGHNVDDLIAILQEVKTTQTTGPVLIHLITEKGRGYPYAEKAADKY 180

Query: 379 HGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 438
           HGVAKFDPATGKQFK++A TQSYTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLFLRR
Sbjct: 181 HGVAKFDPATGKQFKANASTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRR 240

Query: 439 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAM 498
           FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAM
Sbjct: 241 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAM 300

Query: 499 DRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 558
           DRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR
Sbjct: 301 DRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 360

Query: 559 GNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVA 618
           GNG+GVELP GNKG PLEVGKGRILIEGERVALLGYG+AVQ+CLAA+ L+E  GLRLTVA
Sbjct: 361 GNGVGVELPTGNKGTPLEVGKGRILIEGERVALLGYGSAVQTCLAAATLVEPLGLRLTVA 420

Query: 619 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 678
           DARFCKPLDHAL+R LAKSHE LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRPLVLP
Sbjct: 421 DARFCKPLDHALVRKLAKSHEFLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPLVLP 480

Query: 679 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           DRYIDHG+PADQLA AGLTP H+AATVFNILGQTREALE+MSF
Sbjct: 481 DRYIDHGAPADQLADAGLTPCHLAATVFNILGQTREALEVMSF 523


>gi|229463110|gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia miltiorrhiza]
          Length = 724

 Score =  983 bits (2542), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/654 (69%), Positives = 548/654 (83%), Gaps = 1/654 (0%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +   +PPTP+LDTINYP HMKNLS+ EL+ LADELR ++++ VSKTGGHL SSLGV ELT
Sbjct: 70  FTGDKPPTPILDTINYPNHMKNLSVEELEGLADELREEIVYTVSKTGGHLSSSLGVSELT 129

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P+D+I+WDVGHQ YPH+ILTGRR +MHT+RQT GL+GF KR ES +D FG 
Sbjct: 130 VALHHVFNTPEDKIIWDVGHQAYPHEILTGRRSRMHTIRQTFGLAGFPKRDESAHDAFGA 189

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAVGRDL  + N+V++VIGDGAMTAGQAYEA+NNAG+LDS++I++LND
Sbjct: 190 GHSSTSISAGLGMAVGRDLLHKNNHVISVIGDGAMTAGQAYEALNNAGFLDSNLIIVLND 249

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTAT+DGP PPVGALS AL+RLQ++R  R+LRE AKG+T+Q+G   HE+A+KVD
Sbjct: 250 NKQVSLPTATIDGPAPPVGALSKALTRLQASRKFRQLREAAKGMTRQMGEQAHEIASKVD 309

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
            Y +GM+   G++LFEELG+YYIGPVDGHNV+D V I ++VK     GPVLIH++TEKG+
Sbjct: 310 TYMKGMMGKPGASLFEELGIYYIGPVDGHNVEDPVYIFKKVKEMPAPGPVLIHIITEKGK 369

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE AADK HGV KFDP TGKQ KS   T+SYT YFAE+L+AEAE D  +VAIHAAM
Sbjct: 370 GYSPAEVAADKMHGVVKFDPTTGKQLKSKTNTKSYTQYFAESLVAEAEHDDRIVAIHAAM 429

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           GGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR YDQVVHD
Sbjct: 430 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCTIYSSFLQRGYDQVVHD 489

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VDLQKLPVRF MDRAG+VGADGPTHCG+FD T+MACLPNM VMA SD+ +L HM+ATAAA
Sbjct: 490 VDLQKLPVRFMMDRAGVVGADGPTHCGAFDTTYMACLPNMFVMASSDKLDLMHMIATAAA 549

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDR SC  YP G      LPP NKG PLE+GKGRIL EG RVA+LG+GT VQ+CLAA+ 
Sbjct: 550 IDDRLSCVIYPEGTR-RAPLPPNNKGTPLEIGKGRILKEGSRVAILGFGTIVQNCLAAAQ 608

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
           LL+ +G+ +TVADARFCKPLD  LI+ L + HEVLITVEEGSIGGF +H+  FL+ +GLL
Sbjct: 609 LLQEHGISVTVADARFCKPLDGDLIKKLVQEHEVLITVEEGSIGGFSAHISHFLSLNGLL 668

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           DG +KWRP+VLPDRYIDHG+  DQ+ +AGL+P HIA TV +++G  +++L +++
Sbjct: 669 DGNLKWRPMVLPDRYIDHGAQTDQIEEAGLSPKHIAGTVVSLIGGGKDSLHLIN 722


>gi|340764675|gb|AEK69519.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Alpinia officinarum]
          Length = 711

 Score =  982 bits (2539), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/652 (71%), Positives = 543/652 (83%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           +Y  ++P TP+LDTINYPIHMKNLS ++L+QLA ELRA+++F V+ TGGHL SSLGV++L
Sbjct: 58  DYSGEKPATPILDTINYPIHMKNLSNQDLEQLAAELRAEIVFTVADTGGHLSSSLGVVDL 117

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
            VALH+VF+ P D+I+WDVGHQ YPHKILTGRR +MHT+R+TDGL+GF KR ESE+D FG
Sbjct: 118 AVALHHVFDTPADKIIWDVGHQAYPHKILTGRRSQMHTIRRTDGLAGFPKREESEHDAFG 177

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISAGLGMAV RDL+G+K++V+AVIGDGAMTAGQAYEAMNNAGYLDS++IV+LN
Sbjct: 178 VGHSSTSISAGLGMAVARDLQGKKSHVIAVIGDGAMTAGQAYEAMNNAGYLDSNLIVVLN 237

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN+  SLPTA LD P  PVGALS AL+ LQS+  LR LRE AK +TKQIGG  +ELA+KV
Sbjct: 238 DNRHGSLPTAALDEPATPVGALSKALTTLQSSPKLRMLREAAKSLTKQIGGQTYELASKV 297

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DLV I ++VK     GPVLIH+VTEK 
Sbjct: 298 DEYARGMISASGSTLFEELGLYYIGPVDGHNVEDLVTIFDKVKALPAPGPVLIHIVTEKE 357

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           + YP  E AADK HGV K DP TGKQFK+ + + SYT  FAE+LI EAEVD  +VA+HAA
Sbjct: 358 KEYPPIEAAADKMHGVMKIDPKTGKQFKTKSPSLSYTQCFAESLIKEAEVDDRIVAVHAA 417

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MG G GL+ F  +FP +CFDVGIAEQHAVTFAAGLA EGLKPFCAI+SSF+QR YDQVV 
Sbjct: 418 MGSGIGLDYFQNKFPEKCFDVGIAEQHAVTFAAGLATEGLKPFCAIHSSFLQRGYDQVVR 477

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DVDLQKLPVRFA+D AGLVG DGPTH G FD+ +MACLPNMVVMAPSDEAEL HMVATA 
Sbjct: 478 DVDLQKLPVRFALDWAGLVGGDGPTHSGVFDIAYMACLPNMVVMAPSDEAELMHMVATAV 537

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           AIDDRP CFR+P+G G+GV LPP +KG PLE+GKG++L+EG RVA+LGYG+ VQ+CL A+
Sbjct: 538 AIDDRPCCFRFPKGTGVGVPLPPNHKGTPLEIGKGKVLMEGNRVAILGYGSIVQTCLKAA 597

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
             L + G+  TVADARFCKPLD  LIR LA  HE+LITVEEGSIGGFGSHV+QFL+  G 
Sbjct: 598 DSLTACGIFATVADARFCKPLDAVLIRKLANEHEILITVEEGSIGGFGSHVMQFLSLRGF 657

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           LDG VK R LVLPDRYIDHGSP DQ   AGLT  HIA TV  +LG+ +EAL+
Sbjct: 658 LDGRVKMRSLVLPDRYIDHGSPEDQFESAGLTFKHIAGTVLQMLGRPKEALQ 709


>gi|412990479|emb|CCO19797.1| 1-deoxy-D-xylulose-5-phosphate (DXP) synthase, plastid precursor
           [Bathycoccus prasinos]
          Length = 727

 Score =  973 bits (2516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/660 (70%), Positives = 551/660 (83%), Gaps = 8/660 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLDTIN+P H+KNLS  +L+Q+A ELRAD+I+NVS+TGGHLGSSLGVIELTVA
Sbjct: 67  SSKPTTPLLDTINFPSHLKNLSADQLEQVAKELRADLIYNVSQTGGHLGSSLGVIELTVA 126

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           L+YVF+ P D+I+WDVGHQ YPHKILTGRRD+M+T+RQTDGLS FTKRSES +DCFG GH
Sbjct: 127 LNYVFDQPTDKIIWDVGHQAYPHKILTGRRDRMNTIRQTDGLSPFTKRSESPFDCFGAGH 186

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RD++G+ N V+AVIGDGA+T G AYEAMNNAGYLD++MI+ILNDN+
Sbjct: 187 SSTSISAGLGMAVARDMQGKSNQVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQ 246

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           QVSLPT        PVGALSS  +RLQS++PLRELRE AK +TKQ+  P+ E+ AKVDEY
Sbjct: 247 QVSLPTQYNSLNQDPVGALSSTFARLQSSKPLRELRESAKAITKQMPTPVQEVTAKVDEY 306

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGMISGSG+TLFEELGLYYIG VDGHN++DLVAIL+EVK TK+ GPVLIHVVTEKGRGY
Sbjct: 307 ARGMISGSGATLFEELGLYYIGTVDGHNLNDLVAILQEVKETKSVGPVLIHVVTEKGRGY 366

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            +AE A DKYHGV+KFD A+G+Q K+S    +YT  FA+A++ EA +D  +VA+HAAMGG
Sbjct: 367 SFAESAQDKYHGVSKFDLASGEQKKASTTIPTYTQVFADAMVGEAMLDDSIVAVHAAMGG 426

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+N F + F  R FDVGIAEQHAVTFAAGLA EGLKP C IYS+F+QR +DQVVHDV 
Sbjct: 427 GTGINHFEKYFAERTFDVGIAEQHAVTFAAGLAAEGLKPMCTIYSTFLQRGFDQVVHDVA 486

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFAMDRAGLVGADGPTH G++D+TFMACLP+MVVMAP +EAEL HM+AT+ AID
Sbjct: 487 LQKLPVRFAMDRAGLVGADGPTHAGAYDITFMACLPDMVVMAPRNEAELCHMIATSFAID 546

Query: 549 DRPSCFRYPRGNGIGVELP--------PGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           D PSCFRYPRG GIG++L         PG KG+PLEVGKG++L EG    LLGYGT   +
Sbjct: 547 DCPSCFRYPRGPGIGLDLELEGVKVGNPGYKGVPLEVGKGQVLREGTHACLLGYGTPTNN 606

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ LLE  G+ +TVADARFCKPLD  LIR LAK H +L+TVEEGS+GGF SHV+QFL
Sbjct: 607 CLKAAKLLEEYGISVTVADARFCKPLDEKLIRRLAKEHPILVTVEEGSVGGFASHVLQFL 666

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A DGLLDG +K RPL+LPD  I+HGS   QL QAGLTP+HIA+TV ++ G+T E+L+I++
Sbjct: 667 ALDGLLDGNLKVRPLLLPDVPIEHGSDQFQLEQAGLTPAHIASTVLSLQGKTAESLQILA 726


>gi|255070459|ref|XP_002507311.1| predicted protein [Micromonas sp. RCC299]
 gi|226522586|gb|ACO68569.1| predicted protein [Micromonas sp. RCC299]
          Length = 738

 Score =  972 bits (2513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/660 (70%), Positives = 554/660 (83%), Gaps = 8/660 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLDT+N+P+H+KNL++ +L+Q+A ELRAD+I+NVS+TGGHLGSSLGVIELTVA
Sbjct: 78  STKPATPLLDTVNFPVHLKNLAVDQLQQVAKELRADLIYNVSQTGGHLGSSLGVIELTVA 137

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           L+YVF+ P DRI+WDVGHQ YPHK+LTGRRD+M TMRQT+GLS FTKRSES +DCFG GH
Sbjct: 138 LNYVFDQPNDRIIWDVGHQAYPHKMLTGRRDRMSTMRQTNGLSPFTKRSESPFDCFGAGH 197

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RD++GR N+V+AVIGDGA+T G AYEAMNNAGYLD++MI+ILNDN+
Sbjct: 198 SSTSISAGLGMAVARDMQGRSNHVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQ 257

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           QVSLPT        PVGALSS  +RLQS++PLRELRE AK +TKQ+  P+ E+ AKVDEY
Sbjct: 258 QVSLPTQYNSLNQDPVGALSSTFARLQSSKPLRELRESAKAITKQMPVPVQEVTAKVDEY 317

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGMISGSGSTLFEELGLYYIG VDGHN+ DLVAILEEVK+T++ GPVLIH+VTEKGRGY
Sbjct: 318 ARGMISGSGSTLFEELGLYYIGTVDGHNLQDLVAILEEVKSTRSVGPVLIHIVTEKGRGY 377

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            YAE A DKYHGV+ FD A+GKQ KS++   +YT +FA+AL+ EA +D++VVA+HAAMGG
Sbjct: 378 SYAEAAQDKYHGVSTFDVASGKQKKSASGIPTYTQFFADALVGEAGLDENVVAVHAAMGG 437

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLN F + F  R FDVGIAEQHAVTF+AGLA EGLKP CA+YS+F+QR +DQVVHDV 
Sbjct: 438 GTGLNHFEKFFADRTFDVGIAEQHAVTFSAGLAVEGLKPVCAVYSTFLQRGFDQVVHDVA 497

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFAMDRAGLVG DGPTH G++DVTFMACLP+MVVMAP +EAEL HMVAT+ ++D
Sbjct: 498 LQKLPVRFAMDRAGLVGEDGPTHAGAYDVTFMACLPDMVVMAPMNEAELCHMVATSISVD 557

Query: 549 DRPSCFRYPRGNGIGVE--------LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           DRPSCFRYPRG G+G++        L PG KG  LE+GKGRI+ EG  V LLGYGT    
Sbjct: 558 DRPSCFRYPRGTGVGLDLIGEGVEMLRPGYKGGILEIGKGRIIREGIDVCLLGYGTCTNR 617

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           C+ A+ +L   G+ +TVADARFCKPLD  +IR LAKSH  +ITVE+GSIGGF SHV+QFL
Sbjct: 618 CIEAAEVLREFGISVTVADARFCKPLDTKMIRQLAKSHAAIITVEDGSIGGFASHVLQFL 677

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A DGLLDG +K RPL LPDR I+HGS +DQL  AGL+ SHIA+T  ++LGQ ++ALE++S
Sbjct: 678 ALDGLLDGNLKVRPLTLPDRPIEHGSLSDQLQDAGLSSSHIASTALSVLGQKQQALEVLS 737


>gi|145342439|ref|XP_001416190.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
           [Ostreococcus lucimarinus CCE9901]
 gi|144576415|gb|ABO94483.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
           [Ostreococcus lucimarinus CCE9901]
          Length = 746

 Score =  969 bits (2504), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/660 (70%), Positives = 548/660 (83%), Gaps = 8/660 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLDT+ +P H+K L++ +LKQ+A ELRAD+I+NVS+TGGHLGSSLGVIELTVA
Sbjct: 85  SSKPTTPLLDTVQFPSHLKGLNMDQLKQVAKELRADLIYNVSQTGGHLGSSLGVIELTVA 144

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           L+YVF+ P D+I+WDVGHQ YPHKILTGRRD+M+TMRQT GLS FTKRSES YDCFG GH
Sbjct: 145 LNYVFDQPNDKIIWDVGHQAYPHKILTGRRDQMNTMRQTGGLSPFTKRSESPYDCFGAGH 204

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RD++G  N+V+++IGDGA+T G AYEAMNNAG+LD++MI+ILNDN+
Sbjct: 205 SSTSISAGLGMAVARDMQGGDNHVISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQ 264

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           QVSLPT        PVGALSS  +RLQS+RPLRELRE AK +TKQ+  P+ E+ AKVDEY
Sbjct: 265 QVSLPTQYNSMNQDPVGALSSTFARLQSSRPLRELRESAKAITKQMPTPVQEVTAKVDEY 324

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGMISGSGSTLFEELGLYYIG VDGHN++DLVAIL+EVK TK+ GPVLIH+VTEKGRGY
Sbjct: 325 ARGMISGSGSTLFEELGLYYIGTVDGHNLEDLVAILQEVKETKSVGPVLIHIVTEKGRGY 384

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            YAE A DKYHGV+KFD A+G+Q KS+    +YT  FA+ALI EA  D+ VVA+HAAMGG
Sbjct: 385 SYAEDAQDKYHGVSKFDLASGEQSKSTDTIPTYTKVFADALIGEAMADEKVVAVHAAMGG 444

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLN F + F  R +DVGIAEQHAVTFAAGLACEGLKP C IYS+F+QR +DQVVHDV 
Sbjct: 445 GTGLNHFEKYFADRTYDVGIAEQHAVTFAAGLACEGLKPMCTIYSTFLQRGWDQVVHDVA 504

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFAMDRAGLVGADGPTH G++DVTFMACLP+MVVMAP DEAEL HMVAT+ AID
Sbjct: 505 LQKLPVRFAMDRAGLVGADGPTHAGAYDVTFMACLPDMVVMAPMDEAELCHMVATSLAID 564

Query: 549 DRPSCFRYPRGNGIGVE--------LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           DRPSCFRYPRG G+GV         L PG KG+ L++GKGR+L EG  V LLGYGT   +
Sbjct: 565 DRPSCFRYPRGAGVGVNMENESVKVLNPGYKGMVLDIGKGRVLREGTDVVLLGYGTPTNN 624

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +L+  G+  TVADARFCKPLD  LIR LAKSH V ITVEEGSIGGF SHV+ FL
Sbjct: 625 CLLAAQMLQEFGVSATVADARFCKPLDVELIRRLAKSHPVFITVEEGSIGGFASHVLHFL 684

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A DGLLDG +K RP+VLPDR IDHGS A QL +AGL+ SHIA+T  +++G+  E+LE+++
Sbjct: 685 ATDGLLDGGLKVRPMVLPDRPIDHGSYAFQLNEAGLSVSHIASTALSLVGKQNESLEVLA 744


>gi|308800422|ref|XP_003074992.1| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
           [Ostreococcus tauri]
 gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
           [Ostreococcus tauri]
          Length = 741

 Score =  958 bits (2476), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/660 (69%), Positives = 548/660 (83%), Gaps = 8/660 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLDTIN+P H+K+L++ +L Q+A ELRAD+I+NVS+TGGHLGSSLGVIELTVA
Sbjct: 80  STKPATPLLDTINFPSHLKSLTMGQLNQVAKELRADLIYNVSQTGGHLGSSLGVIELTVA 139

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           L+YVF+ P+D+I+WDVGHQ YPHKILTGRRDKM+TMRQT GLS FTKRSES YDCFG GH
Sbjct: 140 LNYVFDQPEDKIIWDVGHQAYPHKILTGRRDKMNTMRQTGGLSPFTKRSESPYDCFGAGH 199

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RD++G   +V+++IGDGA+T G AYEAMNNAG+LD++MI+ILNDN+
Sbjct: 200 SSTSISAGLGMAVARDMQGEDFHVISIIGDGAITGGMAYEAMNNAGFLDTNMIIILNDNQ 259

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           QVSLPT        PVGALSS  +RLQS+RPLRELRE AK +TKQ+  P+ E+ AKVDEY
Sbjct: 260 QVSLPTQYNSLNQDPVGALSSTFARLQSSRPLRELRESAKAITKQMPTPVQEVTAKVDEY 319

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGMISGSGSTLFEELGLYYIG VDGHN++DLVAIL+EVK T++ GPVLIH+VTEKGRGY
Sbjct: 320 ARGMISGSGSTLFEELGLYYIGTVDGHNLEDLVAILQEVKETRSVGPVLIHIVTEKGRGY 379

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            YAE A DKYHGV+KFD A+G+Q +      SYT  FA+ALI EA +D  VVA+HAAMGG
Sbjct: 380 SYAEDAQDKYHGVSKFDLASGRQSQLKENAPSYTKVFADALIGEAMMDDKVVAVHAAMGG 439

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLN F + F  R +DVGIAEQHAVTFAAGLACEGLKP C IYS+F+QR +DQVVHDV 
Sbjct: 440 GTGLNHFEKYFADRTYDVGIAEQHAVTFAAGLACEGLKPMCTIYSTFLQRGWDQVVHDVA 499

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFAMDRAGLVGADGPTH G++DVTFMACLP+MVVMAP +EAEL HMVAT+ AID
Sbjct: 500 LQKLPVRFAMDRAGLVGADGPTHAGAYDVTFMACLPDMVVMAPMNEAELCHMVATSLAID 559

Query: 549 DRPSCFRYPRGNGIGVELP--------PGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           DRPSCFRYPRG G+G+ +         PG KG+ L++GKGR+L EG  V LLGYGT   +
Sbjct: 560 DRPSCFRYPRGAGVGLNMEDESVKLVNPGYKGMVLDIGKGRVLQEGTDVVLLGYGTPTNN 619

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +L+  G+ +TVADARFCKPLD  LIR LAKSH + ITVEEG+IGGF SHV+ FL
Sbjct: 620 CLQAAQMLQKFGVSVTVADARFCKPLDGELIRRLAKSHPIFITVEEGAIGGFASHVMHFL 679

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A DGLLD  +K+RP++LPDR IDHGS + Q+ +AGL+ SHIA+T  +++G+  E+LE+++
Sbjct: 680 ATDGLLDSGLKFRPMILPDRPIDHGSYSFQVNEAGLSASHIASTALSLVGKQHESLEVLA 739


>gi|159488107|ref|XP_001702062.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
 gi|158271436|gb|EDO97255.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
          Length = 708

 Score =  956 bits (2471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/661 (68%), Positives = 540/661 (81%), Gaps = 5/661 (0%)

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           S+ E  E+    P TPLLDT+NYP+H+KN +  +LKQL  ELR+D++  VS+TGGHL SS
Sbjct: 38  SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 97

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVA+HYVFN P+D+I+WDVGHQ Y HKILTGRR  M T+RQT+GLSGFTKR ES
Sbjct: 98  LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 157

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYD FG GHSSTSISA LGMAVGRD+KG+KN+V+AVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 158 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 217

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPT   +    PVGALSSAL+RLQ+NRPLRELRE+AKGVTKQ+   + 
Sbjct: 218 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 277

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           +  AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL+A+L EV++ +T GPVL+H
Sbjct: 278 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEVRSAETVGPVLVH 337

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGY  AE A DK HGV KFDP TGKQ ++  +  SYT YFA+AL AEAE D  +
Sbjct: 338 VVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQVQAKTKAMSYTNYFADALTAEAERDSRI 397

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VA+HAAM GGTGL  F ++FP R FDVGIAEQHAVTFAAGLACEGL PFC IYS+FMQR 
Sbjct: 398 VAVHAAMAGGTGLYRFEKKFPDRTFDVGIAEQHAVTFAAGLACEGLVPFCTIYSTFMQRG 457

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQ+VHDV LQKLPVRFAMDRAGLVGADG THCG+FDVTFMA LP+M+ MAPS+EAEL +
Sbjct: 458 YDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPSNEAELIN 517

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPLEVGKGRILIEGERVALLGY 594
           MVAT AAIDD PSCFR+PRGNG+G++L         KG+PLEVGKG +  +G+ V L+ Y
Sbjct: 518 MVATCAAIDDAPSCFRFPRGNGLGLDLAAYGISKDLKGVPLEVGKGVVRRQGKDVCLVAY 577

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           G++V   LAA+ +LE +G+  TV DARFCKPLD  LIRS AK H V+IT+EEGS+GGF +
Sbjct: 578 GSSVNEALAAADMLERDGVSTTVIDARFCKPLDTKLIRSAAKEHPVMITIEEGSVGGFAA 637

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           HV+QFLA +GLLDG +K+RP+ LPDRYIDHG   DQLA AGLT  HIA+T    LG+ ++
Sbjct: 638 HVMQFLALEGLLDGGLKFRPMTLPDRYIDHGDYRDQLAMAGLTSQHIASTALTTLGRAKD 697

Query: 715 A 715
           A
Sbjct: 698 A 698


>gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas reinhardtii]
          Length = 735

 Score =  956 bits (2470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/661 (68%), Positives = 540/661 (81%), Gaps = 5/661 (0%)

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           S+ E  E+    P TPLLDT+NYP+H+KN +  +LKQL  ELR+D++  VS+TGGHL SS
Sbjct: 65  SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 124

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVA+HYVFN P+D+I+WDVGHQ Y HKILTGRR  M T+RQT+GLSGFTKR ES
Sbjct: 125 LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 184

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYD FG GHSSTSISA LGMAVGRD+KG+KN+V+AVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 185 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 244

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPT   +    PVGALSSAL+RLQ+NRPLRELRE+AKGVTKQ+   + 
Sbjct: 245 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 304

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           +  AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL+A+L EV++ +T GPVL+H
Sbjct: 305 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEVRSAETVGPVLVH 364

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGY  AE A DK HGV KFDP TGKQ ++  +  SYT YFA+AL AEAE D  +
Sbjct: 365 VVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQVQAKTKAMSYTNYFADALTAEAERDSRI 424

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VA+HAAM GGTGL  F ++FP R FDVGIAEQHAVTFAAGLACEGL PFC IYS+FMQR 
Sbjct: 425 VAVHAAMAGGTGLYRFEKKFPDRTFDVGIAEQHAVTFAAGLACEGLVPFCTIYSTFMQRG 484

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQ+VHDV LQKLPVRFAMDRAGLVGADG THCG+FDVTFMA LP+M+ MAPS+EAEL +
Sbjct: 485 YDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPSNEAELIN 544

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPLEVGKGRILIEGERVALLGY 594
           MVAT AAIDD PSCFR+PRGNG+G++L         KG+PLEVGKG +  +G+ V L+ Y
Sbjct: 545 MVATCAAIDDAPSCFRFPRGNGLGLDLAAYGISKDLKGVPLEVGKGVVRRQGKDVCLVAY 604

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           G++V   LAA+ +LE +G+  TV DARFCKPLD  LIRS AK H V+IT+EEGS+GGF +
Sbjct: 605 GSSVNEALAAADMLERDGVSTTVIDARFCKPLDTKLIRSAAKEHPVMITIEEGSVGGFAA 664

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           HV+QFLA +GLLDG +K+RP+ LPDRYIDHG   DQLA AGLT  HIA+T    LG+ ++
Sbjct: 665 HVMQFLALEGLLDGGLKFRPMTLPDRYIDHGDYRDQLAMAGLTSQHIASTALTTLGRAKD 724

Query: 715 A 715
           A
Sbjct: 725 A 725


>gi|303274126|ref|XP_003056386.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462470|gb|EEH59762.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 739

 Score =  954 bits (2465), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/662 (69%), Positives = 541/662 (81%), Gaps = 8/662 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLDT+NYP+H+KNLS+ +LKQ+A ELRAD+I+NVS+TGGHLGSSLGV+ELTVA
Sbjct: 71  STKPATPLLDTVNYPVHLKNLSMEQLKQVAKELRADLIYNVSQTGGHLGSSLGVVELTVA 130

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           L+YVF+ P+DRI+WDVGHQ YPHK+LTGRR +M+TMR+T GLS FTKRSES +DCFG GH
Sbjct: 131 LNYVFDQPEDRIIWDVGHQAYPHKMLTGRRKQMNTMRRTRGLSPFTKRSESPFDCFGAGH 190

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RD++GR N+V+AVIGDGA+T G AYEAMNNAGYLD++MI+ILNDN+
Sbjct: 191 SSTSISAGLGMAVARDMQGRSNHVIAVIGDGAITGGMAYEAMNNAGYLDTNMIIILNDNQ 250

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           QVSLPT        PVGALSS  +RLQS++PLRELRE AK +TKQ+  P+ E+ AKVDEY
Sbjct: 251 QVSLPTQYNSLNQDPVGALSSTFARLQSSKPLRELRESAKAITKQMPVPVQEVTAKVDEY 310

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGMISGSGSTLFEELGLYYIG VDGHN+ DLVAILEEVK+T++ GPVLIH VTEKGRGY
Sbjct: 311 ARGMISGSGSTLFEELGLYYIGTVDGHNLQDLVAILEEVKSTRSVGPVLIHTVTEKGRGY 370

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            YAE A DKYHGV+ FD A+GKQ KSS    SYT  FA+ALI EA  D+ VVA+HAAMGG
Sbjct: 371 SYAEAAQDKYHGVSTFDVASGKQKKSSGGIPSYTQVFADALIGEASRDESVVAVHAAMGG 430

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLN F R F  R FDVGIAEQHAVTFAAGLA EGLKP C IYS+F+QR +DQVVHDV 
Sbjct: 431 GTGLNHFERFFADRTFDVGIAEQHAVTFAAGLAVEGLKPVCTIYSTFLQRGFDQVVHDVA 490

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFAMDRAGLVG DGPTH G++DV FMACLP+MVVMAP +EAEL HMVAT+ AID
Sbjct: 491 LQKLPVRFAMDRAGLVGEDGPTHAGAYDVAFMACLPDMVVMAPMNEAELCHMVATSIAID 550

Query: 549 DRPSCFRYPRGNGIGVELP--------PGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           DRPSCFRYPRG G+G++L         PG +G  +EVGKG+IL EG  + LLGYGT    
Sbjct: 551 DRPSCFRYPRGAGVGIDLEEEGVTMGNPGYRGKVIEVGKGQILQEGTDLCLLGYGTCTNR 610

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
           CL A+ +LE   + +TVADARFCKPLD +LIR LAK+H  +ITVEEGSIGGF SHV+QFL
Sbjct: 611 CLEAAKMLEELDISVTVADARFCKPLDTSLIRQLAKNHAAMITVEEGSIGGFASHVLQFL 670

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A DGLLDG +K RPL LPDR I+HG+   QL +AGL+ S IA++  ++LG   E+  I  
Sbjct: 671 ALDGLLDGNLKVRPLTLPDRPIEHGAFEMQLLEAGLSSSQIASSALSLLGHELESGTIPR 730

Query: 721 FK 722
           F 
Sbjct: 731 FN 732


>gi|307103505|gb|EFN51764.1| hypothetical protein CHLNCDRAFT_59788 [Chlorella variabilis]
          Length = 720

 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/656 (68%), Positives = 539/656 (82%), Gaps = 5/656 (0%)

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           S+ E  ++    PPTPLLDTINYP+H+KNL + +LK+L  ELRAD+I +V+KTGGHLGSS
Sbjct: 58  SIDELQQWEETGPPTPLLDTINYPVHLKNLGLNDLKKLCKELRADLIHSVAKTGGHLGSS 117

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELT+ALHYVFN P+D+I++DVGHQ Y HK+LTGRR KMHT+RQ  GLSGFTKRSES
Sbjct: 118 LGVVELTLALHYVFNTPEDKIIYDVGHQAYIHKMLTGRRSKMHTIRQQGGLSGFTKRSES 177

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
            YD FG GHSSTSISA LGMAVGRD+KGRKNNVVAVIGDGA+T G AYEAMN+AG+LD++
Sbjct: 178 PYDPFGAGHSSTSISAALGMAVGRDVKGRKNNVVAVIGDGAITGGMAYEAMNHAGFLDTN 237

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPT        PVGALSS L+RLQ+NR LRELRE+AKGVTKQ+ G + 
Sbjct: 238 MIVILNDNQQVSLPTQYNGKNQEPVGALSSTLARLQANRQLRELREIAKGVTKQLPGVIQ 297

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
              AK+DEYARGMISG+GSTLFEELG YYIGPVDGHN+ DL+ +L E+K T+T GPVL+H
Sbjct: 298 NATAKIDEYARGMISGTGSTLFEELGFYYIGPVDGHNLQDLIDVLSEIKTTETVGPVLLH 357

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGY  AE A+DK HGV ++D  TGKQ K+ ++ QS+T YFA+AL+AEA+ D  +
Sbjct: 358 VVTEKGRGYLPAESASDKMHGVVQYDTVTGKQVKAKSQAQSFTNYFADALVAEAKKDSRI 417

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           V IHAAMGGGTG+N F + FP R +DVGIAEQHAVTFAAGLACEGL PF AIYSSF+QR 
Sbjct: 418 VGIHAAMGGGTGMNRFEKVFPERVYDVGIAEQHAVTFAAGLACEGLAPFVAIYSSFLQRG 477

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDV LQ LPVRFAMDRAGLVGADG THCG+FDV +MACLPNMVVMAPS+EAEL +
Sbjct: 478 YDQVVHDVSLQNLPVRFAMDRAGLVGADGATHCGAFDVAYMACLPNMVVMAPSNEAELIN 537

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELP-----PGNKGIPLEVGKGRILIEGERVALLGY 594
           MVAT AAIDDRPSCFR+PRG+G+G++L      P  KG P+ +GK R+   G  +AL+GY
Sbjct: 538 MVATCAAIDDRPSCFRFPRGSGVGIDLASEGITPDLKGTPMPIGKMRLRRSGADIALVGY 597

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           G  V  CLAA+ LL+  G+  TV DARFCKPLD  ++R LAK H +++TVEEGSIGGF +
Sbjct: 598 GNPVNDCLAAAELLQQAGVSATVVDARFCKPLDTDMLRKLAKEHPLMVTVEEGSIGGFAA 657

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           HV+QFL  +GL+DG  K+RP+ LPDRYI+HG+ A+QLA+AGL+ SHIAAT   +LG
Sbjct: 658 HVMQFLCLEGLMDGNFKFRPMTLPDRYIEHGTQAEQLAEAGLSASHIAATALAVLG 713


>gi|302850873|ref|XP_002956962.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
           nagariensis]
 gi|300257680|gb|EFJ41925.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
           nagariensis]
          Length = 728

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/661 (68%), Positives = 533/661 (80%), Gaps = 13/661 (1%)

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           S+ E  E+  + P TPLLDT+NYP+H+KN ++ +LKQL  ELR+D++  VS+TGGHL SS
Sbjct: 64  SVEEIDEWQDRGPKTPLLDTVNYPVHIKNFNLDQLKQLCKELRSDIVHTVSRTGGHLSSS 123

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVALHYVFN P+D+I+WDVGHQ Y HKILTGRR  M T+RQT+GLSGFTKR ES
Sbjct: 124 LGVVELTVALHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMGTIRQTNGLSGFTKREES 183

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYD FG GHSSTSISA LGMAVGRD+K +KNNV+AVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 184 EYDPFGAGHSSTSISAALGMAVGRDVKSKKNNVIAVIGDGAITGGMAYEAMNHAGFLDKN 243

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIV        SLPT   +    PVGALSSAL+RLQ+NRPLRELRE+AKGVTKQ+   + 
Sbjct: 244 MIV--------SLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 295

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           +  AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHNVDDLVA+L EVK+ +T GPVL+H
Sbjct: 296 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNVDDLVAVLNEVKSAETVGPVLVH 355

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           VVTEKGRGY  AE A DK HGV KFDP TGKQ ++  +  SYT YFA+AL AEAE D  +
Sbjct: 356 VVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQQQAKTKAMSYTNYFADALTAEAERDSRI 415

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           VA+HAAM GGTGL  F +RFP R FDVGIAEQHAVTFAAGLACEGL PFC IYS+FMQR 
Sbjct: 416 VAVHAAMAGGTGLYRFEKRFPERVFDVGIAEQHAVTFAAGLACEGLVPFCTIYSTFMQRG 475

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQ+VHDV LQKLPVRFAMDRAGLVGADG THCG+FDVTFMA LP+M+ MAPS+EAEL +
Sbjct: 476 YDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFMASLPHMITMAPSNEAELVN 535

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPLEVGKGRILIEGERVALLGY 594
           MVATAAAIDD PSCFR+PRGNG+G++L         KG PLE+GKG +  +G+ V LL Y
Sbjct: 536 MVATAAAIDDAPSCFRFPRGNGLGLDLSQYGITKDLKGTPLEIGKGVVRRQGKDVCLLAY 595

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           G++V   LAA+ +LE +G+  TV DARFCKPLD AL+R  A+ H V+I++EEGSIGGF +
Sbjct: 596 GSSVNEALAAAEMLERDGVSATVIDARFCKPLDTALVRMAAREHPVMISIEEGSIGGFAA 655

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           HV+QFLA +GLLDG +K+RP+ LPDRYI+HG   DQLA AGLT  HIA+T    LG+ ++
Sbjct: 656 HVMQFLALEGLLDGGLKFRPMTLPDRYIEHGDYRDQLAMAGLTAQHIASTALTTLGRAKD 715

Query: 715 A 715
           A
Sbjct: 716 A 716


>gi|251826344|gb|ACT21080.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dunaliella salina]
          Length = 753

 Score =  922 bits (2383), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/656 (66%), Positives = 526/656 (80%), Gaps = 4/656 (0%)

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           S  E   + +Q  PTPLLDT+NYP+H+KN ++ +L+QL  ELRA+++  VSKTGGHL +S
Sbjct: 81  SFEEIDAWDTQGLPTPLLDTVNYPVHIKNFNMPQLRQLCKELRAEIVHGVSKTGGHLSAS 140

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELTVA+HYVF+AP D+ +WDVGHQ Y HKI+TGRRDKM T+R+T GLSGFTKR+ES
Sbjct: 141 LGVVELTVAMHYVFSAPDDKFIWDVGHQAYVHKIMTGRRDKMQTIRKTGGLSGFTKRAES 200

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYD FG GHSSTSISAGLGMAVGRD K R N VVAVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 201 EYDPFGAGHSSTSISAGLGMAVGRDTKNRNNQVVAVIGDGAITGGMAYEAMNHAGFLDKN 260

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           MIVILNDN+QVSLPT        PVGA++  L+R+Q+NRPLRELREVAKG+TKQ+   + 
Sbjct: 261 MIVILNDNQQVSLPTQYNSKNQAPVGAMAGTLARIQANRPLRELREVAKGMTKQLPTAVQ 320

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
              AK+DEYARGMISG+GSTLFEELGLYYIGP+DGHN+DDL+++L EV++ +T GPVLIH
Sbjct: 321 NATAKIDEYARGMISGTGSTLFEELGLYYIGPLDGHNLDDLISVLSEVRSAETIGPVLIH 380

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           V+TEKG GY  AE + DK HGV KFDP TGKQF S  +T SYT YFA++LIAEA+ D  +
Sbjct: 381 VITEKGHGYEPAEASQDKMHGVVKFDPKTGKQFASKPKTMSYTNYFADSLIAEAKRDSRI 440

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           +AIHAAM GGTGL  F    P R FDVGIAEQHAVTF+AGLACEGL PFC IYS+F+QR 
Sbjct: 441 MAIHAAMAGGTGLTRFENALPDRVFDVGIAEQHAVTFSAGLACEGLVPFCTIYSTFLQRG 500

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDV LQ LPVRFAMDRAG+VGADG THCG+FD+T+MA LPNMV MAPS+EAEL +
Sbjct: 501 YDQVVHDVALQNLPVRFAMDRAGMVGADGATHCGAFDITYMASLPNMVCMAPSNEAELIN 560

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGN----KGIPLEVGKGRILIEGERVALLGYG 595
           MVATAAAIDDRPSCFR+PRGNGIGV+L        KG PLE+GKG +  +G  V LL YG
Sbjct: 561 MVATAAAIDDRPSCFRFPRGNGIGVDLEAAGIKDMKGTPLEIGKGVVRRQGTDVCLLAYG 620

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           ++V   +AA+  L+ +G+  TV DARFCKPLD  LIR  A+ H V++++EEG+IGGF +H
Sbjct: 621 SSVNEAMAAAEALQLDGVSATVIDARFCKPLDTDLIRKAAQEHPVMVSIEEGAIGGFAAH 680

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           V+QFL  +GLLDG +K+RP+ +PDR+I+HG   DQL  AGLTP HIA T   ILG+
Sbjct: 681 VMQFLTLEGLLDGGLKFRPMCMPDRFIEHGDYRDQLNLAGLTPGHIAGTALQILGR 736


>gi|384248886|gb|EIE22369.1| 1-deoxy-D-xylulose 5-phosphate synthase [Coccomyxa subellipsoidea
           C-169]
          Length = 732

 Score =  907 bits (2345), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/666 (65%), Positives = 531/666 (79%), Gaps = 18/666 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           PPTPLLDT+N+P+H+KN ++ +L+QL  ELR+D++  VSKTGGHLG+SLGV+ELTVALHY
Sbjct: 59  PPTPLLDTVNFPVHLKNFNMGQLRQLCKELRSDIVHTVSKTGGHLGASLGVVELTVALHY 118

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           V N P D+I+WDVGHQ Y HKILTGRR +M T+RQT GLSGFT R+ESEYD FG GHSST
Sbjct: 119 VMNTPDDKIVWDVGHQAYGHKILTGRRSRMPTIRQTGGLSGFTNRAESEYDPFGAGHSST 178

Query: 192 SISAGLGMAVGRDLK-------------GRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SISA LGMAV RD K             GRKN+ VAVIGDGA+T G AYEAMN+AG+LD 
Sbjct: 179 SISAALGMAVARDFKASTTSHDSNKYLCGRKNHCVAVIGDGAITGGMAYEAMNHAGFLDK 238

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           +MIV+LNDN+QVSLPT        PVGALS AL+RLQ+NRPLRELRE+AKGVTKQ+  P+
Sbjct: 239 NMIVVLNDNQQVSLPTQYNGKNQDPVGALSGALARLQANRPLRELREIAKGVTKQLPEPI 298

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
            E  AK+DEYARGMISGSGSTLFEELGLYYIGP+DGHN++ L+ +L+EVK+T+T GPVLI
Sbjct: 299 QEATAKIDEYARGMISGSGSTLFEELGLYYIGPIDGHNLELLITMLQEVKSTETVGPVLI 358

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           H++TEKG GY  A  A+DK HGVAK+D ATGKQ K  A++ SYT YFA+ALIAEAE+D  
Sbjct: 359 HIITEKGHGYEPAVLASDKMHGVAKYDIATGKQSKPKAKSGSYTNYFADALIAEAELDSR 418

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           VV IHAAMGGGTG+N F +R+P R FDVGIAEQHAVTFAAGLA EG+ P CAIYSSF+QR
Sbjct: 419 VVGIHAAMGGGTGMNRFEQRYPERTFDVGIAEQHAVTFAAGLAAEGMIPMCAIYSSFLQR 478

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
            YDQ+VHDV LQKLPVRFAMDRAGLVGADG TH G  DVT+M  LPNM++MAPS+EAEL 
Sbjct: 479 GYDQIVHDVALQKLPVRFAMDRAGLVGADGATHSGFADVTYMGVLPNMIIMAPSNEAELC 538

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPLEVGKGRILIEGERVALLG 593
           + VAT+ AIDD+PSC R+PRGNG+GV+          KG P ++GKG +   G+ VAL+ 
Sbjct: 539 NAVATSVAIDDQPSCLRFPRGNGLGVDFAAYGVSEKLKGTPWQIGKGVVRKGGKDVALVC 598

Query: 594 YGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFG 653
           YGT   + LAA+ +LE +G+  TVAD RFCKPLD  L+R +A+ H V+ITVEE  IGGFG
Sbjct: 599 YGTMTNNGLAAAEMLEKSGVTATVADMRFCKPLDMPLLRQMAREHPVMITVEENGIGGFG 658

Query: 654 SHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           SHV+  LA +GLLDG +K+RP+ LPDR+I+HGS  DQLA+AGL+ SHIAAT   +LG+ +
Sbjct: 659 SHVMHNLALEGLLDGNLKFRPMTLPDRFIEHGSQTDQLAEAGLSASHIAATALTLLGRKK 718

Query: 714 EALEIM 719
           +++ ++
Sbjct: 719 DSVALL 724


>gi|171850410|gb|ACB55417.1| 1-deoxy-D-xylulose 5-phosphate synthase [Picrorhiza kurrooa]
          Length = 687

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/669 (65%), Positives = 527/669 (78%), Gaps = 26/669 (3%)

Query: 61  LSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           +  +  +  ++P TPLLDTIN P HMKNLS+            ++++ VSKTGGHL SSL
Sbjct: 37  IKRKLNFSGEKPWTPLLDTINCPAHMKNLSV------------EIVYVVSKTGGHLSSSL 84

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQT----YPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           GV ELTVALH+ FN P+D+I+WDVGHQ     Y HKILTGRR KM T+RQT GL+GF KR
Sbjct: 85  GVTELTVALHHEFNTPEDKIIWDVGHQVTQQAYMHKILTGRRSKMSTIRQTFGLAGFPKR 144

Query: 177 SESEYDCFGTGHSSTSISAGLG-MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY 235
            ES +D FG GHSSTSISA LG MAVGRDL G+ N+V++VIGDGAMTAGQAYEAMNNAG+
Sbjct: 145 EESAHDAFGVGHSSTSISAALGGMAVGRDLLGKDNHVISVIGDGAMTAGQAYEAMNNAGF 204

Query: 236 LDSDMIVILNDN-KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI 294
           LDS++I++LN+  KQVSLPTAT+DGP PPVGAL+ AL++LQ     R+L E AKG+ KQ+
Sbjct: 205 LDSNLIIVLNEQTKQVSLPTATIDGPAPPVGALTKALTKLQLGTSFRQLPEAAKGIAKQV 264

Query: 295 GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG 354
           GG   E AAK+D +A G++   G++LFEELG+YYIGP DGH+++  V   +++K     G
Sbjct: 265 GG---EGAAKLDTFASGLMGSPGASLFEELGIYYIGPGDGHSINYFVYFFKQIKEMPAPG 321

Query: 355 PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAE 414
           PV++H+VTEKG+G P AE AA+K  GV KF+P+TGKQ KS  +T SYT YFAE+LIA+A 
Sbjct: 322 PVMVHIVTEKGKGSPPAEAAANKMRGVVKFEPSTGKQIKSKPKTLSYTQYFAESLIAKAA 381

Query: 415 VDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 474
           V+K +VA+HAAMGGGTGLN F + FP RCFDVGIA+QHAVTFAAGLA EGLKPFCAIYSS
Sbjct: 382 VNKKIVAVHAAMGGGTGLNFFQKHFPERCFDVGIAKQHAVTFAAGLATEGLKPFCAIYSS 441

Query: 475 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE 534
           F+QR YDQVVHDVDLQKLPVRF MDRAGLVGADGPTHCG+FD TFMACLPNMVVMAPSDE
Sbjct: 442 FLQRGYDQVVHDVDLQKLPVRFLMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSDE 501

Query: 535 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGY 594
           AEL HM+ATAA IDDRPSC RYPRGNG+G  LP  NKG PLEVGKGRIL EG RVA+LG+
Sbjct: 502 AELMHMIATAAKIDDRPSCIRYPRGNGVGAILPKNNKGTPLEVGKGRILREGSRVAILGF 561

Query: 595 GTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
           GT VQ+CLAAS LL+  G+ +TVADARFCKPLD  LIR LAK HEVLIT+E+G  GGF S
Sbjct: 562 GTIVQTCLAASQLLQDQGVDVTVADARFCKPLDGELIRQLAKEHEVLITIEDGQFGGFSS 621

Query: 655 HVVQFLAQDGLLDG--TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           HV  FL    L D    +KWR + LPDRYI+HGS  DQ+ +AGL+  HIAATV +++G  
Sbjct: 622 HVGHFLC---LTDTRRNLKWRAMGLPDRYIEHGSQDDQIEEAGLSSRHIAATVLSLIGDG 678

Query: 713 REALEIMSF 721
           +++L +M+ 
Sbjct: 679 KDSLHLMNL 687


>gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
          Length = 585

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/585 (71%), Positives = 490/585 (83%), Gaps = 4/585 (0%)

Query: 141 LWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMA 200
           +WDVGHQ YPHKILTGRR +MHT+RQ  GL+GF KR ES YD FG GHSSTSISA LGMA
Sbjct: 1   IWDVGHQAYPHKILTGRRPRMHTIRQGFGLAGFPKRDESPYDAFGAGHSSTSISAALGMA 60

Query: 201 VGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP 260
           VGRDL G+ N+V++VIGDGAMTAGQAYEAMNNAG+LDS++I++LNDN QVSLPTAT+DGP
Sbjct: 61  VGRDLLGKSNHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLNDNNQVSLPTATVDGP 120

Query: 261 IPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL 320
            PPVGALS AL+RLQ++R  R LRE AK +TKQ+G  +HE AAKVD Y RGM     +TL
Sbjct: 121 APPVGALSEALTRLQASRKFRLLREAAKSMTKQMGEHVHETAAKVDTYVRGMAGPPRATL 180

Query: 321 FEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHG 380
           FEELGLYYIGPVDGH+++DLV IL++VK     GPVLIH++TEKG+GY  AE AADK HG
Sbjct: 181 FEELGLYYIGPVDGHSIEDLVHILKKVKEMPAPGPVLIHILTEKGKGYSPAEAAADKMHG 240

Query: 381 VAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFP 440
           V KFD  TGKQ KS ++T+SYT YFAE+L+AEA+ D  +VAIHAAMGGGTGLN+F ++FP
Sbjct: 241 VVKFDVRTGKQAKSKSKTKSYTQYFAESLVAEAKQDDKIVAIHAAMGGGTGLNIFQKQFP 300

Query: 441 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 500
            RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRF MDR
Sbjct: 301 DRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFIMDR 360

Query: 501 AGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGN 560
           AGLVGADGPTHCG+FD T+MACLPNMVVMAPSDEAEL HM+ATAA IDD+PS  RYPRGN
Sbjct: 361 AGLVGADGPTHCGAFDTTYMACLPNMVVMAPSDEAELMHMIATAATIDDQPSSIRYPRGN 420

Query: 561 GIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADA 620
           GIG +LP  NKG PL++GKGRIL EG RVA++G+G  VQ+C+AA+A+L+ +G+ +TVADA
Sbjct: 421 GIGADLPADNKGTPLQIGKGRILREGSRVAIMGFGAVVQNCMAAAAILDQHGVHVTVADA 480

Query: 621 RFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDR 680
           RFCKPLD  LIR LAK HEVL+TVEEGS+GGF SHV QFL+ +G LDG +KWRP+VLPDR
Sbjct: 481 RFCKPLDGGLIRQLAKEHEVLVTVEEGSVGGFSSHVAQFLSLNGFLDGKLKWRPMVLPDR 540

Query: 681 YIDHGSPADQLAQAGLTPSHIAATVFNIL----GQTREALEIMSF 721
           YIDHG+  DQ+ +AGL+P HIA TV  ++    G+ R  L  + F
Sbjct: 541 YIDHGAQVDQIEEAGLSPKHIACTVMAMVSGDGGKDRLKLIQLEF 585


>gi|61656097|gb|AAX49359.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
          Length = 481

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/477 (87%), Positives = 451/477 (94%)

Query: 244 LNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAA 303
           LNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG +HELAA
Sbjct: 1   LNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAA 60

Query: 304 KVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTE 363
           KVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPVLIHVVTE
Sbjct: 61  KVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTE 120

Query: 364 KGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 423
           KGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  +VAIH
Sbjct: 121 KGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIH 180

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
           AAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQV
Sbjct: 181 AAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQV 240

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           VHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAEL HMVAT
Sbjct: 241 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVAT 300

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLA 603
           AAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+AVQ CL 
Sbjct: 301 AAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLT 360

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQD 663
           A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH+ QF+A D
Sbjct: 361 AASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHIAQFMALD 420

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           GLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL IM+
Sbjct: 421 GLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 477


>gi|399966672|gb|AFP65821.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Eriobotrya
           japonica]
          Length = 483

 Score =  879 bits (2272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/483 (91%), Positives = 465/483 (96%)

Query: 238 SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           SDMI+ILNDNKQVSLPTA+LDGPIPPVGALSSALSRL SNRPLRELREVAKGVTKQIGG 
Sbjct: 1   SDMIIILNDNKQVSLPTASLDGPIPPVGALSSALSRLLSNRPLRELREVAKGVTKQIGGS 60

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           +H LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDL++IL+EVK TKTTGPVL
Sbjct: 61  VHNLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLISILKEVKITKTTGPVL 120

Query: 358 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 417
           I +VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK+SA TQSYTTYFAEALIAEAE DK
Sbjct: 121 IRLVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKASASTQSYTTYFAEALIAEAEADK 180

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
           D+VAIHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+Q
Sbjct: 181 DIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQ 240

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH GSFDVTFMACLPNMVVMAPSDEAEL
Sbjct: 241 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSGSFDVTFMACLPNMVVMAPSDEAEL 300

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           F MVATAAAIDDRPSCFRYPRGNG+GVELP GNKG PLEVGKGRILIEGERVALLGYG A
Sbjct: 301 FDMVATAAAIDDRPSCFRYPRGNGVGVELPLGNKGTPLEVGKGRILIEGERVALLGYGAA 360

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           VQSCLAAS+L+ES+GLRLTVADARFCKPLD ALIRSLAKSHE LITVEEGS+GGFGSHV 
Sbjct: 361 VQSCLAASSLVESHGLRLTVADARFCKPLDRALIRSLAKSHEFLITVEEGSVGGFGSHVA 420

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            FLA DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQTREALE
Sbjct: 421 HFLALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNMLGQTREALE 480

Query: 718 IMS 720
           IMS
Sbjct: 481 IMS 483


>gi|374341518|gb|AEZ35187.1| 1-deoxy-D-xylulose 5-phosphate synthase-III [Botryococcus braunii]
          Length = 730

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/664 (62%), Positives = 511/664 (76%), Gaps = 6/664 (0%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           + G    ++P TPLLDT+  P+H+KN + ++L+QL +ELR D+I +VS TGGHLGSSLGV
Sbjct: 64  QNGNKDWRKPKTPLLDTVQNPMHLKNFNKQQLRQLCEELRQDIISSVSTTGGHLGSSLGV 123

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           +ELTVALHYVFNAP DRI+WDVGHQ Y HKILTGRRD+M+T+RQ+ GLSGFT RSES+YD
Sbjct: 124 VELTVALHYVFNAPYDRIIWDVGHQAYGHKILTGRRDRMNTIRQSGGLSGFTNRSESDYD 183

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD-SDMI 241
            FG GHSSTSISA +GMA+G D+KG +N+ +AVIGDGA+T G AYEAMN+AG+ +  ++I
Sbjct: 184 AFGAGHSSTSISAAVGMAIGLDIKGMRNHSIAVIGDGAITGGMAYEAMNHAGFENVKNLI 243

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           +ILNDN+QVSLPT        PVGALS+ L++LQ+N+ L ELRE  K  TK +  P+ + 
Sbjct: 244 IILNDNQQVSLPTHYNGQQQSPVGALSATLAKLQTNKGLLELRERVKAFTKTLPAPLQDA 303

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
            AK+DEYARGMISG  STLFEELG +Y+GP+DGH+V  LV IL ++K T   GPVL+HV 
Sbjct: 304 TAKMDEYARGMISGVASTLFEELGCFYVGPIDGHDVSQLVDILRDLKETPVQGPVLLHVR 363

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           T+KG+GY +AE+A+D+ HGV K+DP TG+QFK + +T SYT +FA+ALIAEAE+D  V  
Sbjct: 364 TQKGQGYKFAEEASDRMHGVGKYDPETGEQFKGAEKTPSYTHFFADALIAEAELDSRVQG 423

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           IHAAMGGGTG+N F +RF +R +DVGIAEQHAVTFAAGLACEGL P  AIYSSF+QR YD
Sbjct: 424 IHAAMGGGTGMNRFAKRFQSRTYDVGIAEQHAVTFAAGLACEGLVPVVAIYSSFLQRGYD 483

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           QV+HDV LQ LPVRFAMDRAGLVGADG TH G  DVTFM CLPNMVVMAPS+EAEL + +
Sbjct: 484 QVIHDVALQSLPVRFAMDRAGLVGADGATHSGFADVTFMGCLPNMVVMAPSNEAELCNAL 543

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVEL-----PPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           ATA A D+ PSCFR+PRGNGIGV+L      P  KG P  +GK  I   G+ VA L YGT
Sbjct: 544 ATAIAYDEGPSCFRFPRGNGIGVDLAEFGVAPNYKGRPWVLGKASIRRSGKDVAFLAYGT 603

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
            V  CLAA+ +L +NG+  TV D RFCKPLD  +++  AK H V+ITVEE +IGGFGSHV
Sbjct: 604 VVNDCLAAAEMLAANGVSATVVDMRFCKPLDKEIVKRCAKEHPVVITVEENAIGGFGSHV 663

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           +  LA +GLLD  VK RP+VLPDR+I+H +  +QLA AGL  +HI AT    LG    A 
Sbjct: 664 LHCLALEGLLDTNVKVRPMVLPDRFIEHATQQEQLATAGLDAAHIFATAIKTLGLPYNAP 723

Query: 717 EIMS 720
            +++
Sbjct: 724 AVLA 727


>gi|224177807|gb|ACN38875.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase [Linum
           usitatissimum]
          Length = 443

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/443 (93%), Positives = 433/443 (97%)

Query: 231 NNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV 290
           NNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAKGV
Sbjct: 1   NNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV 60

Query: 291 TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT 350
           TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH++DD+VAIL+EVK+T
Sbjct: 61  TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDIVAILKEVKST 120

Query: 351 KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALI 410
           K TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG+QFKSSA TQSYTTYFAEALI
Sbjct: 121 KATGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGQQFKSSAPTQSYTTYFAEALI 180

Query: 411 AEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 470
           AEAE DKDVVAIHAAMGGGTGLN FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA
Sbjct: 181 AEAEADKDVVAIHAAMGGGTGLNQFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 240

Query: 471 IYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMA 530
           IYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMA
Sbjct: 241 IYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMA 300

Query: 531 PSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVA 590
           PSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GVELPPGNKG+PLEVG+GRILIEGERVA
Sbjct: 301 PSDEAELFHMVATAAAIDDRPSCFRYPRGNGLGVELPPGNKGVPLEVGQGRILIEGERVA 360

Query: 591 LLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIG 650
           LLGYG AVQSCLAA++L+E +GL++TVADARFCKPLD ALIRSLAK+HEVLITVEEGSIG
Sbjct: 361 LLGYGAAVQSCLAAASLVEPHGLKVTVADARFCKPLDQALIRSLAKTHEVLITVEEGSIG 420

Query: 651 GFGSHVVQFLAQDGLLDGTVKWR 673
           GFGSHVVQFLA DGLLDG +KWR
Sbjct: 421 GFGSHVVQFLALDGLLDGKLKWR 443


>gi|359476100|ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
 gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/691 (59%), Positives = 512/691 (74%), Gaps = 14/691 (2%)

Query: 38  HFSHKLDNHQIQL---------KKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKN 88
           +F  KLD+ ++ L          KR  G   SL E G++   R PTP+LD +  P+ +KN
Sbjct: 33  NFPPKLDSSRMNLYPCSSSTTSSKRYVGQICSLPEFGDFFWDRIPTPMLDMVESPMCLKN 92

Query: 89  LSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQT 148
           L+ +ELKQLADE+R ++   +SK      +SL V+ELTVA+HY+F+AP D+ILWDVG  T
Sbjct: 93  LTPKELKQLADEIRVELFCIMSKMQKPFKASLAVVELTVAIHYIFHAPMDKILWDVGEVT 152

Query: 149 YPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR 208
           Y HKILTGRR  MHT+R+  GLSGFT RSESEYD FG GH  +SISAGLGMAV RDLKG+
Sbjct: 153 YAHKILTGRRALMHTLRERGGLSGFTSRSESEYDPFGAGHGCSSISAGLGMAVARDLKGK 212

Query: 209 KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALS 268
           +  +V VIG+G   AGQ YEAM NAGYLD++M+VILND++  SL     DG   P+ ALS
Sbjct: 213 RERIVTVIGNGTTMAGQVYEAMGNAGYLDTNMVVILNDSRH-SLHPKLEDGQATPINALS 271

Query: 269 SALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYY 328
           S L++LQS++  R+ RE AKGVTK+IG  MHELAAKVDEYARGM+   G+TLFEELGLYY
Sbjct: 272 STLTKLQSSKSFRKFREAAKGVTKRIGKGMHELAAKVDEYARGMVGPLGATLFEELGLYY 331

Query: 329 IGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPAT 388
           IGPVDGHN++DL+++L+ V +   TGPVL+HV+T++ +G   ++K+      +  F  + 
Sbjct: 332 IGPVDGHNIEDLISVLQGVASLDPTGPVLVHVITKEYQGVEASQKSMISNGHLKGFYTS- 390

Query: 389 GKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGI 448
             +       + Y+  F EAL+ EAE DKD+V +HA MG    L LF  +FP + FDVG+
Sbjct: 391 --ELSPYPLPRMYSDCFVEALVNEAEKDKDIVVVHAGMGMEPPLQLFQEKFPYKFFDVGM 448

Query: 449 AEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADG 508
           AEQHAVTF+AGLAC GLKPFC I S+F+QRAYDQVVHDVD Q++PVRFA+  AGLVG+DG
Sbjct: 449 AEQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQVVHDVDRQRIPVRFAITSAGLVGSDG 508

Query: 509 PTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPP 568
           PT CG+FD+TFM+CLPNM+VMAPSDE EL HMVATAA +DDRP CFRYPRG   G+    
Sbjct: 509 PTRCGAFDITFMSCLPNMIVMAPSDENELMHMVATAAHVDDRPICFRYPRGATAGMSNSI 568

Query: 569 GNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 628
            N GIP+E+GKG++LIEG+ VALLGYG  VQ+CL A +LL   G+R+TVADARFCKPLD 
Sbjct: 569 WN-GIPIEIGKGKVLIEGKDVALLGYGVMVQNCLKAWSLLSELGIRVTVADARFCKPLDI 627

Query: 629 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPA 688
            L+R L ++H  LITVEEGS+GGFGSHV QF+A DG LDG +KWRP+ LPD YI+  SP 
Sbjct: 628 QLVRELCENHAFLITVEEGSVGGFGSHVAQFIALDGKLDGRIKWRPIALPDNYIEQASPE 687

Query: 689 DQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +QLA AGLT  HIAATV ++LG+ REAL +M
Sbjct: 688 EQLAIAGLTGHHIAATVLSLLGRNREALLLM 718


>gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 717

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/702 (58%), Positives = 508/702 (72%), Gaps = 10/702 (1%)

Query: 21  HKSSPVTSHFFGAALFSHFSHKLDNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTI 80
           HK   ++S F     FS  +    +  I   K   G   S+ +  +   ++ PTP+LD +
Sbjct: 22  HKLDTLSSSFPNKVGFSSVNLYQGSASITNSKGFVGRICSVPDLDDIFWEKVPTPILDVV 81

Query: 81  NYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRI 140
             PIH+ NL+++ELK+LADE+R ++   +S+T     +SL V+ELTVA+H+VF+AP D+I
Sbjct: 82  ENPIHLNNLTLQELKELADEIREELSSIMSRTQKAFKASLAVVELTVAIHHVFHAPVDKI 141

Query: 141 LWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMA 200
           LWDVG QTY HKILTGRR  MHT+RQ +GLSGFT +SESEYD FG GH   S+SAGLGMA
Sbjct: 142 LWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFTSQSESEYDPFGAGHGCNSVSAGLGMA 201

Query: 201 VGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP 260
           V RD+KG++  VV VI +G   AGQ YEAM+NAGY+DS+MIVILND++  SL     +GP
Sbjct: 202 VARDMKGKRERVVTVISNGTTMAGQVYEAMSNAGYIDSNMIVILNDSRH-SLHPKIEEGP 260

Query: 261 IPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL 320
              + ALSS LSRLQS++  R+ RE AKGVTK+IG  MHELAAKVDEYARGMI   GSTL
Sbjct: 261 KTSLNALSSTLSRLQSSKSFRKFREAAKGVTKRIGRGMHELAAKVDEYARGMIGPLGSTL 320

Query: 321 FEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA---ADK 377
           FEELGLYYIGPVDGHN++DLV +L+EV +  + GPVLIHVVTE+ R     +K     + 
Sbjct: 321 FEELGLYYIGPVDGHNIEDLVCVLQEVASLDSMGPVLIHVVTEENRRRDNKQKIDTLENL 380

Query: 378 YHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLR 437
             G +  DP     F  S  T++Y+  F EALI EAE DKD+V +HA M   T   L   
Sbjct: 381 QEGSSNSDP-----FLYSIHTRTYSDCFVEALIMEAEKDKDIVIVHAGMEMETAFQLIQE 435

Query: 438 RFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFA 497
           R+P R FDVG+AEQHAVTF+AGL+C GLKPFC I S+F+QRAYDQVVHDVD Q++PVRF 
Sbjct: 436 RYPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSTFLQRAYDQVVHDVDQQRIPVRFV 495

Query: 498 MDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYP 557
           +  AGLVG+DGP  CG+FD+TFM+CLPNM+VMAPSDE EL  MVATA  IDD P CFRYP
Sbjct: 496 ITSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATAVQIDDHPVCFRYP 555

Query: 558 RGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTV 617
           RG  +G +      GIP+E+GKG++LIEG+ VALLGYG  VQ+CL A  LL   G+ +TV
Sbjct: 556 RGAIVGTD-HYMRIGIPIEIGKGKVLIEGKDVALLGYGAMVQNCLKARHLLSKLGIEVTV 614

Query: 618 ADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVL 677
           ADARFCKPLD  L+R L ++H  L+TVEEGS+GGFGSHV QFL+ DG LDG VKWRP+VL
Sbjct: 615 ADARFCKPLDMKLLRQLCENHAFLVTVEEGSVGGFGSHVAQFLSLDGQLDGKVKWRPIVL 674

Query: 678 PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           PD YI+H  P +QL  AGLT  HIAATV  +LG+TREAL +M
Sbjct: 675 PDTYIEHALPKEQLNLAGLTGHHIAATVLRLLGRTREALLLM 716


>gi|163797802|ref|ZP_02191748.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
 gi|159176924|gb|EDP61490.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
          Length = 638

 Score =  819 bits (2115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/642 (63%), Positives = 489/642 (76%), Gaps = 13/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+  P  +K L +  LKQ+ADELR + I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 6   TPLLDTVRIPSDLKGLGVDALKQVADELRTETIDAVSMTGGHLGAGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +AP D+I+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFT+RSESEYD FG  HSSTSI
Sbjct: 66  DAPNDKIIWDVGHQAYPHKILTDRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDLKG + NVVAVIGDGAM+AG AYEAMNNAG +DS +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVARDLKGERFNVVAVIGDGAMSAGMAYEAMNNAGSMDSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LS++ S+R  R LR +AK V + +   +   A + +E+ARGM+
Sbjct: 185 --------PPVGAMSAYLSQIVSSRSYRSLRHMAKQVAQHLPKAIERTAKRAEEFARGMV 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG  Y+GPVDGHN+D L+ +L+ +++T   GPVL+HVVTEKGRG+P+AE 
Sbjct: 237 TGG--TLFEELGFLYVGPVDGHNLDHLLPVLKNLRDTPGHGPVLLHVVTEKGRGHPFAET 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH VAKFD  TG Q K  A   SYT  FA++LIAEAE D  VVAI AAM  GTGL+
Sbjct: 295 SADKYHAVAKFDVVTGTQAKPKANAPSYTNVFADSLIAEAEADDRVVAITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QR YDQVVHDV +Q LP
Sbjct: 355 RFEKRFPERLFDVGIAEQHAVTFAAGLAAEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ ++ CLP  V+MAPSDEAEL HMVATAAAIDDRPS 
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDLAYLGCLPGFVIMAPSDEAELVHMVATAAAIDDRPSA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GVELP   +G PLE+G+GR++ EG  VALL  G  +Q CL+A+  L + GL
Sbjct: 475 VRYPRGEGVGVELPA--RGQPLEIGRGRVVREGTSVALLSLGGRLQECLSAADDLAARGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D AL+R LA  H VLITVEEGSIGGF S V+ +LA +GLLD  +  R
Sbjct: 533 STTVADARFAKPIDTALLRRLAAEHAVLITVEEGSIGGFSSQVLHYLATEGLLDRGLVVR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           PLVLPDR+IDH  P  Q AQAGL  + I AT    LG+  EA
Sbjct: 593 PLVLPDRFIDHDKPEVQYAQAGLDAAGIVATALAALGKDAEA 634


>gi|357466311|ref|XP_003603440.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
 gi|355492488|gb|AES73691.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
          Length = 708

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/658 (60%), Positives = 499/658 (75%), Gaps = 8/658 (1%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           +++ ++ PTP+LDT+  P+ +KNLS +ELKQLA E+R ++   +S T   L  S+ V++L
Sbjct: 57  DFYWEKVPTPILDTVQNPLCLKNLSQQELKQLAAEIRLELSSILSGTQILLNPSMAVVDL 116

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVA+H+VF+AP D+ILWDVG QTY HKILTGRR  M T+R+ +GLSGFT R ESEYD FG
Sbjct: 117 TVAIHHVFHAPVDKILWDVGDQTYAHKILTGRRSLMKTIRKKNGLSGFTSRFESEYDAFG 176

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GH   SISAGLGMAV RD+KGR+  VVAVI +    +GQ YEAM+NAGYLDS+++VILN
Sbjct: 177 AGHGCNSISAGLGMAVARDIKGRRERVVAVISNWTTMSGQVYEAMSNAGYLDSNLVVILN 236

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           D++   LP    DG    V ALSS LSRLQS++  R+ RE AKGVTK+IG  MHELAAKV
Sbjct: 237 DSRHSLLPKIE-DGSKTSVNALSSTLSRLQSSKSFRKFREAAKGVTKRIGRGMHELAAKV 295

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGM+   GSTLFEELGLYYIGPVDGHN++DL+++L+EV +  + GPVLIHV+T + 
Sbjct: 296 DEYARGMMGPPGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLDSMGPVLIHVITNEN 355

Query: 366 RGYPYAEKA--ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 423
           +   + +K+   DK       +  +     ++ R Q+Y   F E+L+AEAE DKD+V +H
Sbjct: 356 QVEEHNKKSYMTDKQQD----ESVSFDLLDNAGRLQTYGDCFVESLVAEAEKDKDIVVVH 411

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
           A +     L LF+ +FP R F+VGIAEQHAVTFA+GL+C GLKPFC I SSF+QRAYDQV
Sbjct: 412 AGITTEPSLKLFMEKFPDRIFNVGIAEQHAVTFASGLSCGGLKPFCIIPSSFLQRAYDQV 471

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           VHDVD QK+PVRF +  AGLVG+DGP  CG+FD+TFM+CLPNM+VMAPSDEAEL HMVAT
Sbjct: 472 VHDVDQQKVPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEAELVHMVAT 531

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLA 603
           AA I+D+P CFRYPRG  +G +    + GIP+E+GKGRIL+EG+ VALLGYG+ VQ+CL 
Sbjct: 532 AAHINDQPVCFRYPRGALVGKDEAILD-GIPIEIGKGRILVEGKDVALLGYGSMVQNCLK 590

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQD 663
           A +LL + G+ +TVADARFCKPLD  L+R L K H  LITVEEGSIGGFGSHV QF+A D
Sbjct: 591 AYSLLANLGIEVTVADARFCKPLDIELLRQLCKHHSFLITVEEGSIGGFGSHVAQFIALD 650

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
           GLLD  +KWRP+VLPD YI+H SP  QL QAGLT  HIAAT  ++LG+TREAL  M  
Sbjct: 651 GLLDRRIKWRPIVLPDSYIEHASPNQQLNQAGLTGHHIAATALSLLGRTREALSFMCL 708


>gi|356518258|ref|XP_003527796.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 716

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/658 (60%), Positives = 495/658 (75%), Gaps = 11/658 (1%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           +YH ++ PTP+LD +  P+ +KNLS++ELKQLA E+R+D+   +S T     +S+ V+EL
Sbjct: 64  DYHREKVPTPILDMVENPLCLKNLSLKELKQLAVEIRSDLSSIMSGTQISPKASMAVVEL 123

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVA+H+VFNAP D+ILWDVG QTY HKILTGRR  M TMR+ +GLSGFT R ESEYD FG
Sbjct: 124 TVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTSRFESEYDAFG 183

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GH   SISAGLGMAV RD+KGR+  VVAVI +    AGQAYEAM+NAGYLDS+M+VILN
Sbjct: 184 AGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILN 243

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           D++   LP    +GP   V ALSS LS+LQS++  R  RE AKGVTK+IG  MHELAAKV
Sbjct: 244 DSRHSLLPKIE-EGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKV 302

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGM+   GSTLFEELGLYYIGPVDGHN++DL+ +L+EV +  + GPVL+HV+T++ 
Sbjct: 303 DEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDEN 362

Query: 366 RGYPYAEKA----ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           +G   ++K+      K  G  K D        +    Q+Y   F   L+AEAE DKD++ 
Sbjct: 363 QGDDNSQKSDMSDEQKNEGFVKSD-----LLDNPVWPQTYGNCFVATLVAEAEKDKDIIV 417

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           +HA +     L LF  +FP R FDVG+AEQHAVTFA+GLAC GLKPFC I SSF+QRAYD
Sbjct: 418 VHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIPSSFLQRAYD 477

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           QVVHDVD Q++PVRF +  AGLVG+DGP  CG+FD+ FM+CLPNM+VMAPSDE EL HMV
Sbjct: 478 QVVHDVDQQRIPVRFVITSAGLVGSDGPLRCGAFDINFMSCLPNMIVMAPSDELELMHMV 537

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
           ATA  I+++P CFRYPRG  +G     G+ GIP+++G+GR+L+EG+ VA LGYG+ VQ+C
Sbjct: 538 ATATRINNQPICFRYPRGALVGEGYTIGD-GIPIKIGRGRVLVEGKDVAFLGYGSMVQNC 596

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA 661
           L A +LL   G+ +TVADARFCKPLD  L+R L K H  L+TVEEGSIGGFGSHV QF+A
Sbjct: 597 LKAHSLLAKLGIEVTVADARFCKPLDIMLLRQLCKHHSFLVTVEEGSIGGFGSHVAQFIA 656

Query: 662 QDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
            +GLLDG +KWRP+VLPDRYI+H SP +QL QAGL+  HIAAT  ++LG+TREAL  M
Sbjct: 657 VNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFM 714


>gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa]
 gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa]
          Length = 657

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/650 (62%), Positives = 492/650 (75%), Gaps = 11/650 (1%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +  PIH+KNL+I+ELK LA E+R+++   +SKT   L +SL V+ELTVA+H+VF
Sbjct: 15  TPLLDVVENPIHLKNLTIKELKLLASEIRSELSSIMSKTQNDLKASLAVVELTVAIHHVF 74

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +AP D+ILWDVG QTY HKILTGRR  MHT+RQ DGLSGFT RSESEYD FG GH   SI
Sbjct: 75  HAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKDGLSGFTSRSESEYDPFGAGHGCNSI 134

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAG+GMA+ RD+KG++  +V VIG+G   AGQ YEAM NAGYLD++MIVILND++  SL 
Sbjct: 135 SAGIGMAIARDIKGKRERIVTVIGNGTTMAGQVYEAMGNAGYLDTNMIVILNDSRH-SLH 193

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
               +G    + ALSS LS+LQS++  R LREVAKGVTK+IG  MHELAAKVDEYARGM+
Sbjct: 194 PKIEEGSKTSITALSSTLSKLQSSKSFRRLREVAKGVTKRIG--MHELAAKVDEYARGMM 251

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY--- 370
              GSTLFEELGLYYIGPVDGHN+ +LV +L+EV +  + GPVLIHV+TE+ +   Y   
Sbjct: 252 GPLGSTLFEELGLYYIGPVDGHNIGELVCVLQEVSSLDSMGPVLIHVITEENQCTEYKQP 311

Query: 371 AEKAADKYHGV-AKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           +E   ++  G+ + FD     +   S   ++Y+  F EALI EAE DKD+V +HA M   
Sbjct: 312 SEAMENQQEGILSSFD---SNELLYSMHARTYSDCFVEALIMEAEKDKDIVIVHAGMEMD 368

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
               LF  RFP R FD+G+AEQHAVTF+AGL+C GLKPFC I S+FMQRAYDQVVHDVD 
Sbjct: 369 PSFQLFRERFPDRFFDLGMAEQHAVTFSAGLSCGGLKPFCIIPSAFMQRAYDQVVHDVDR 428

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q++PVRF +  AGLVG+DGPT CG+FD+TFM+CLPNM+VMAPSDE EL  MVATA   DD
Sbjct: 429 QRIPVRFVITSAGLVGSDGPTMCGAFDITFMSCLPNMIVMAPSDEDELVDMVATAVHSDD 488

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P CFRYPRG  +G +      GIP+E+GKG+ILIEG+ VALLGYG  VQ+CL A ALL 
Sbjct: 489 HPICFRYPRGAIVGTD-HYTRSGIPIEIGKGKILIEGKDVALLGYGEMVQNCLRARALLS 547

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
             G+ +TVADARFCKPLD  L+R L ++H  L+TVEEGSIGGFGSHV QF+A DG LDG 
Sbjct: 548 KLGIEVTVADARFCKPLDMKLLRQLCENHAFLVTVEEGSIGGFGSHVSQFIALDGQLDGR 607

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
            KWRP+VLPD+YI+H  P +QLA AGLT  HIAATV  +LG+TREAL +M
Sbjct: 608 TKWRPIVLPDKYIEHALPKEQLALAGLTGHHIAATVLRLLGRTREALLLM 657


>gi|374341514|gb|AEZ35185.1| 1-deoxy-D-xylulose 5-phosphate synthase-I [Botryococcus braunii]
          Length = 770

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/661 (60%), Positives = 496/661 (75%), Gaps = 28/661 (4%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TP LD +  P H+K+    ELK +  ELRA++I  VS TGGHLGSSLGV+ELTVA+HY
Sbjct: 81  PETPYLDKVKVPAHLKSFRKDELKTVCRELRAEIINAVSATGGHLGSSLGVVELTVAIHY 140

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P+D+++WDVGHQ Y HKILTGRRDKMHT+RQ DGLSGFT RSESEYD FG GHSST
Sbjct: 141 VFDCPEDKLVWDVGHQAYGHKILTGRRDKMHTIRQRDGLSGFTNRSESEYDAFGAGHSST 200

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD-----------M 240
           SISA LGMAVGRDL G+ N+ +AVIGDGA+T G AYEA+N+AG+L S+            
Sbjct: 201 SISAALGMAVGRDLLGKDNHCIAVIGDGAITGGMAYEALNHAGFLGSEKIQGKGNNIGRT 260

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE 300
           IVILNDN+QVSLPT        PVGAL+ ALS++ S    ++L   AK + KQ+  P+  
Sbjct: 261 IVILNDNQQVSLPTQFNGEKQKPVGALADALSQVAS----KQLSNSAKEIVKQLPEPLQA 316

Query: 301 LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           +  ++++    +  G  +T F+ELG+ ++GP+DGHNV+DLV +LE +K+ K  GPV++H+
Sbjct: 317 VGGQLEKVVSTI--GGNNTFFDELGVAHVGPIDGHNVEDLVNVLEWIKSQKDGGPVIVHI 374

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           +TEKG GY +AEKA+D+ HGVAK+D  +GKQ KSS++  SYTTYFA++LIAEAE D  V+
Sbjct: 375 LTEKGYGYEFAEKASDRMHGVAKYDVTSGKQVKSSSKVASYTTYFADSLIAEAERDGRVI 434

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
            IHAAMGGGTG+N F +RFP R FDVGIAEQHAVTFAAGLACEGL P CAIYSSF+QRAY
Sbjct: 435 GIHAAMGGGTGMNRFAKRFPKRTFDVGIAEQHAVTFAAGLACEGLIPMCAIYSSFLQRAY 494

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQV+HDV LQ LPVRFAMDRAGLVGADG TH G  DVT+MAC+PNM+VMAPS+EAEL + 
Sbjct: 495 DQVIHDVALQNLPVRFAMDRAGLVGADGATHSGFADVTYMACVPNMIVMAPSNEAELCNA 554

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELP-----PGNKGIPLEVGKGRILIEGER------V 589
           VAT+ AID  PSCFR+PRGNGIGV+L      P  KG P E+GKG+I   G        V
Sbjct: 555 VATSIAIDFAPSCFRFPRGNGIGVDLAEYGVQPNFKGTPWEIGKGKIRRNGSNNKPEGDV 614

Query: 590 ALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI 649
           ALLGYGT V  CLAA+ +LE+ G++ TVAD RFCKPLD  LI  LAK+H V+ITVEE ++
Sbjct: 615 ALLGYGTVVNDCLAAAEMLEAQGIKTTVADMRFCKPLDEELIVQLAKNHPVVITVEENTV 674

Query: 650 GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           GGF SHV+ F+ + G LDG +K R L+LPDR+I+HG+   QL +A LT + I  T  N L
Sbjct: 675 GGFASHVLHFMTEQGFLDGKMKLRTLLLPDRFIEHGTQQQQLEEALLTANDIVETAVNAL 734

Query: 710 G 710
           G
Sbjct: 735 G 735


>gi|414163144|ref|ZP_11419391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
 gi|410880924|gb|EKS28764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
          Length = 638

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/641 (62%), Positives = 492/641 (76%), Gaps = 14/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD IN P  ++ L   EL Q+A ELRA+ I  V+ TGGHLGS LGV+ELTVALH+VF
Sbjct: 5   TPLLDQINCPADLRKLKESELLQVAQELRAETINTVAVTGGHLGSGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKR+ESEYDCFGT HSSTSI
Sbjct: 65  NTPDDRIIWDVGHQAYPHKILTSRRDRIRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG +DS +IVILNDN ++S+ 
Sbjct: 125 SAGLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS LSRL S+   R LRE+ K V K++   + + A + +EYARGM+
Sbjct: 184 --------PPVGAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   TLFEELG YY+GP+DGHN+D L+ +L+ V+++K  GP LIHVVTEKG+GY +AE 
Sbjct: 236 SGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDSKV-GPTLIHVVTEKGKGYSHAET 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYHGV KFD ATGKQ K+ A   SYT+ F  AL+  AE D+ ++ I AAM  GTG++
Sbjct: 293 AKDKYHGVVKFDVATGKQDKAKANAPSYTSVFGNALVKLAEKDEKIIGITAAMPSGTGVD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + +P R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QRAYDQVVHDV +QKLP
Sbjct: 353 IFQKVYPERTFDVGIAEQHAVTFAAGLATEGMKPFVAIYSTFLQRAYDQVVHDVAIQKLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADGPTH GSFD+ ++ CLP+MV+MA SDEAEL HMVATAAAI+DRPS 
Sbjct: 413 VRFVIDRAGLVGADGPTHAGSFDLAYLGCLPDMVIMAASDEAELVHMVATAAAINDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG+G+GV+LP   +G+PLE+GKGRI+ EG  VA+L  GT +   L A+ +L+S+GL
Sbjct: 473 FRFPRGDGVGVDLPA--EGVPLEIGKGRIVREGSSVAILSLGTRLNESLKAADILKSHGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D  L+  LA+ H+VLIT+EEG+IGGFG+ V+  LA+ G LD  +K R
Sbjct: 531 TTTVADARFAKPIDTDLVLQLARDHDVLITIEEGAIGGFGAQVLHTLAEAGALDKGLKVR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +VLPD +ID  SPA   A+AGL    I   VF  LG+  E
Sbjct: 591 SMVLPDVFIDQDSPAAMYAKAGLDAKGIVKRVFEALGRENE 631


>gi|299133455|ref|ZP_07026649.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
 gi|298591291|gb|EFI51492.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
          Length = 638

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/641 (62%), Positives = 493/641 (76%), Gaps = 14/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD IN P  ++ L   EL Q+A ELRA+ I  V+ TGGHLGS LGV+ELTVALH+VF
Sbjct: 5   TPLLDQINCPSDLRKLKESELAQVAQELRAETINTVAVTGGHLGSGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKR+ESEYDCFGT HSSTSI
Sbjct: 65  NTPEDRIIWDVGHQAYPHKILTSRRDRIRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG +DS +IVILNDN ++S+ 
Sbjct: 125 SAGLGMAVARDLSGANNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS LSRL S+   R LRE+ K V K++   + + A + +EYARGM+
Sbjct: 184 --------PPVGAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   TLFEELG YY+GP+DGHN+D L+ +L+ V+++K  GP LIHVVT+KG+GY +AE 
Sbjct: 236 SGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDSKV-GPTLIHVVTQKGKGYSHAET 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYHGV KFD ATGKQ K+ A   SYT+ F  AL+  AE D+ ++ I AAM  GTG++
Sbjct: 293 AKDKYHGVVKFDVATGKQNKAKANAPSYTSVFGNALVKLAEKDEKIIGITAAMPSGTGID 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + +P R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QRAYDQVVHDV +QKLP
Sbjct: 353 IFQKVYPERTFDVGIAEQHAVTFAAGLATEGMKPFVAIYSTFLQRAYDQVVHDVAIQKLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADGPTH GSFD+ ++ CLP+MV+MA SDEAEL HMVATAA I+DRPS 
Sbjct: 413 VRFVIDRAGLVGADGPTHAGSFDLAYLGCLPDMVIMAASDEAELVHMVATAAGINDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG+G+GV+LP  ++G+PLE+GKGRI+ EG  VA+L  GT +   L A+ +L+S+GL
Sbjct: 473 FRFPRGDGVGVDLP--SEGVPLEIGKGRIVREGSSVAILSLGTRLNESLKAADILKSHGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D  L+  LA+ H+VLIT+EEG+IGGFG+ V+  LA+ G LD  +K R
Sbjct: 531 TTTVADARFAKPIDTDLVLQLARDHDVLITIEEGAIGGFGAQVLHTLAEAGALDKGLKVR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +VLPD +ID  SPA   A+AGL    I   VF  LG+  E
Sbjct: 591 SMVLPDVFIDQDSPAAMYAKAGLDAKGIVKRVFEALGRENE 631


>gi|154251237|ref|YP_001412061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvibaculum
           lavamentivorans DS-1]
 gi|154155187|gb|ABS62404.1| deoxyxylulose-5-phosphate synthase [Parvibaculum lavamentivorans
           DS-1]
          Length = 650

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/646 (62%), Positives = 488/646 (75%), Gaps = 14/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + +PPTPLLD +  P  ++ L   +L+QLA+ELRA+++  VS+TGGHLG+ LGV+ELTVA
Sbjct: 3   NSKPPTPLLDRVTVPADLRALGEGDLRQLAEELRAEMVDAVSQTGGHLGAGLGVVELTVA 62

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P+DRI+WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKR+ESEYD FG  H
Sbjct: 63  LHYVFNTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQGDGLSGFTKRAESEYDPFGAAH 122

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSIS+GLGMAV RDLKG  NNVVAVIGDGAM+AG AYEAMNNAG ++S +I+ILNDN 
Sbjct: 123 SSTSISSGLGMAVARDLKGGTNNVVAVIGDGAMSAGMAYEAMNNAGSMNSRLIIILNDN- 181

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L+RL S    R +R +AK + + +   + E A + +EY
Sbjct: 182 DMSIA--------PPVGAMSAYLARLLSGGAYRSMRHLAKQLAQLLPKRLEESARRAEEY 233

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM   +G TLFEELGLYY+GP+DGHN D L+ +L+ V++    GP+L+HVVT+KG+GY
Sbjct: 234 ARGM--ATGGTLFEELGLYYVGPIDGHNFDHLLPVLKNVRDAGE-GPILVHVVTQKGKGY 290

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV+KFD  TG Q K+ A   SYT  FAE+LIA AE D  +VAI AAM G
Sbjct: 291 APAEAAEDKYHGVSKFDVVTGTQAKAQANAPSYTKVFAESLIAHAEEDDKIVAITAAMPG 350

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+LF +RFP R FDVGIAEQHAVTFAAGLA EG KPF  IYS+F+QRAYDQVVHDV 
Sbjct: 351 GTGLDLFAQRFPGRTFDVGIAEQHAVTFAAGLATEGFKPFATIYSTFLQRAYDQVVHDVA 410

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADGPTH GSFDVT++ACLP  VVMA +DE EL HMVATA AID
Sbjct: 411 IQRLPVRFAIDRAGLVGADGPTHAGSFDVTYLACLPGFVVMAAADEVELKHMVATAVAID 470

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           DRPS  RYPRG G+G+E+P    G PLE+GKGRIL +G +VA+L  GT +   L A+  L
Sbjct: 471 DRPSSLRYPRGEGVGIEMPA--IGTPLEIGKGRILRQGTKVAILSLGTRLAEALKAAEQL 528

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TV DARF KPLD  LI  LA+ HE+LITVEEGSIGGFGSHV+ FLA  G LD 
Sbjct: 529 GALGLSTTVVDARFAKPLDEDLIARLAREHELLITVEEGSIGGFGSHVLDFLAHSGALDR 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +K RP+ LPD +ID   P      AGL  + I  T  ++LGQ R+
Sbjct: 589 GLKVRPMALPDIFIDQDKPEKMYDIAGLNAAQIVETALSVLGQERQ 634


>gi|209402473|gb|ACI45959.1| putative plastid 1-deoxy-D-xylulose 5-phosphate synthase precursor
           [Pyropia yezoensis]
          Length = 660

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/654 (62%), Positives = 489/654 (74%), Gaps = 22/654 (3%)

Query: 83  PIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILW 142
           P   ++ S+ ++K+LA ELR D I +VSKTGGHLG+SLGV+ELTVALH+VFN P DRI+W
Sbjct: 3   PADYRSWSLPQIKRLAHELRWDTIRSVSKTGGHLGASLGVVELTVALHFVFNTPHDRIVW 62

Query: 143 DVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG 202
           DV HQ Y HKILTGRRD M TMRQ+ GLSGFTKR+ESEYD FG GHSSTSISA LGMAV 
Sbjct: 63  DVAHQAYCHKILTGRRDSMGTMRQSGGLSGFTKRTESEYDPFGAGHSSTSISAALGMAVA 122

Query: 203 RDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP-I 261
           RDL G+ N  +AVIGDGA+T G AYEAMNNAGYL + +IV+LNDN QVSLPT T     +
Sbjct: 123 RDLAGKNNECIAVIGDGAITGGMAYEAMNNAGYLKNRVIVVLNDNGQVSLPTGTQTAAGV 182

Query: 262 PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS-GSGSTL 320
            P GALS+  SRL S++P  ++R  AK  ++     +  +AAKVDEYARG++S G G TL
Sbjct: 183 VPSGALSNYTSRLLSSKPFSDVRSAAKDFSRLFPEEVQGIAAKVDEYARGIVSPGGGGTL 242

Query: 321 FEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHG 380
           FEELG YYIGP+DGHN+D L+ ILE V++     PV++HV TEKGRGY  AE A D+YHG
Sbjct: 243 FEELGFYYIGPIDGHNLDTLIPILENVRDLPGNKPVMLHVKTEKGRGYAPAEGAFDRYHG 302

Query: 381 VAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFP 440
           VAKFD ATGKQ KS A T SYT  FA ALIAEAE D+ VVAI AAM GGTGLNLF  RFP
Sbjct: 303 VAKFDVATGKQAKSVAPTPSYTGVFARALIAEAERDRKVVAITAAMPGGTGLNLFGERFP 362

Query: 441 TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDR 500
            RC+DVGIAEQHAVT AAG+A EG KP C IYS+F+QR YDQVVHDV LQ+LPVRF +DR
Sbjct: 363 NRCYDVGIAEQHAVTLAAGMATEGAKPVCCIYSTFLQRGYDQVVHDVALQRLPVRFILDR 422

Query: 501 AGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGN 560
           AGLVG DG TH GSFD+ ++ CLPNM +MAPSDE EL HM+ATA A DD P+  RYPRGN
Sbjct: 423 AGLVGNDGATHAGSFDLAYLGCLPNMTIMAPSDEVELQHMIATAIAFDDGPTVVRYPRGN 482

Query: 561 GIGV------------ELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLA 603
           G+G+            E+P   + +P  +GKGRIL       G +VALL  GT +  C+ 
Sbjct: 483 GLGLETLRSKLGYRGAEMPARGRALP--IGKGRILRHASGNGGRKVALLSIGTRLLECVN 540

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQD 663
           A+  LE+ G+ +TVADARF KPLD  L+RSLA  HEVL+TVEEGSIGGFG HV+ FLA +
Sbjct: 541 AADALEAAGVAVTVADARFMKPLDTELVRSLAADHEVLVTVEEGSIGGFGDHVLHFLALE 600

Query: 664 GLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           GLLD G ++ RP+VLPDRYIDHGS ++Q  +AGL  SHI AT   +LG++ E L
Sbjct: 601 GLLDGGDLRVRPMVLPDRYIDHGSQSEQYEEAGLNASHIEATALRLLGRSAEVL 654


>gi|356509936|ref|XP_003523698.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 716

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/657 (59%), Positives = 492/657 (74%), Gaps = 3/657 (0%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           +  +Y+ ++ PTP+LD +  P+ +KNLS++ELKQLA E+R+D+   +S T     +S+ V
Sbjct: 61  DNDDYYREKVPTPILDMVENPLCLKNLSLQELKQLAVEIRSDLSSIMSGTQISPKASMAV 120

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           +ELTVA+H+VFNAP D+ILWDVG QTY HKILTGRR  M TMR+ +GLSG T R ESEYD
Sbjct: 121 VELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGVTSRFESEYD 180

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
            FG GH  +SISAGLGMAV RD+KGR+  V+AVI +    AGQAYEAM+NAGYLDS+M+V
Sbjct: 181 AFGAGHGCSSISAGLGMAVARDIKGRRERVIAVISNWTTMAGQAYEAMSNAGYLDSNMVV 240

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILND++   LP    +GP   V ALSS LS+LQS++  R  RE AKGVTK+IG  MHELA
Sbjct: 241 ILNDSRHSLLPKIE-EGPKTFVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELA 299

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           AKVDEYARGM+   GSTLFEELGLYYIGPVDGHN++DL+ +L+EV +  + GPVL+HV+T
Sbjct: 300 AKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVIT 359

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           ++ +G   ++K+ D   G             +  R Q+Y   F E L+ EAE DKD+V +
Sbjct: 360 DENQGDENSQKS-DISDGQQDEGSVKSDSLDNPVRPQTYGNCFVETLVVEAEKDKDIVVV 418

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
           HA +     L LF  +FP R FDVG+AEQHAVTFA+GLAC GLKPFC I SSF+QRAYDQ
Sbjct: 419 HAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIASSFLQRAYDQ 478

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDVD Q++PVRF +  AGLVG+DGP  CG+FD+ FM+CLPNM+VMAPSDE EL HMVA
Sbjct: 479 VVHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDINFMSCLPNMIVMAPSDEVELMHMVA 538

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCL 602
           TA  I+ +P CFRYPRG  +G      + GIP+++G+GR+L+EG+ VA LGYG+ VQ+CL
Sbjct: 539 TATRINSQPICFRYPRGALVGRGYTISD-GIPIKIGRGRVLVEGKDVAFLGYGSMVQNCL 597

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A +LL   G+ +TVADARFCKPLD  L+R L K H  L+TVEEGSIGGFGS V QF+A 
Sbjct: 598 KAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSFLVTVEEGSIGGFGSQVAQFIAV 657

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +GLLDG ++WRP+VLPDRYI+H SP +QL QAGL+  HIAAT  ++LG+TREAL  M
Sbjct: 658 NGLLDGRIQWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFM 714


>gi|402850980|ref|ZP_10899163.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
 gi|402498749|gb|EJW10478.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
          Length = 641

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/642 (62%), Positives = 490/642 (76%), Gaps = 12/642 (1%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           Q   TPLLD +N P  ++ L   EL+QLADELR ++I  VS+TGGHLG+ LGV+ELTVAL
Sbjct: 3   QPSKTPLLDRVNTPDDLRRLEPGELRQLADELRQEMISAVSQTGGHLGAGLGVVELTVAL 62

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HYVF+ P+DR++WDVGHQ YPHKI+TGRRD++ T+RQ  GLSGFTKRSESEYD FG  HS
Sbjct: 63  HYVFSTPEDRLIWDVGHQAYPHKIITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 122

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISAGLGMA+ RDL  + NNVV VIGDGAM+AG AYEA+NNAG +DS++IV+LNDN  
Sbjct: 123 STSISAGLGMAIARDLDEKANNVVCVIGDGAMSAGMAYEALNNAGAMDSNLIVVLNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PPVGALS+ L+RL + RP   LRE+ K   +++   +HE A + +E+A
Sbjct: 182 MSIA--------PPVGALSAYLARLMTGRPYLSLREIGKQFAQRLPRRIHEQAVRAEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R MI+  G TLFEELG YY+GP+DGHN+D L+ +L+ V++ K  GP+L+HVVT+KG+GY 
Sbjct: 234 RNMIT-HGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDAKRRGPILVHVVTQKGKGYA 292

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE +ADKYHGV KFD ATG Q KS+A+  SYT  F+EAL+ EA+ D  VVAI AAM  G
Sbjct: 293 PAEVSADKYHGVVKFDVATGAQVKSNAKAPSYTKVFSEALVQEAKKDSKVVAITAAMPAG 352

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TG++LF   FP R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV L
Sbjct: 353 TGVDLFGELFPDRFFDVGIAEQHAVTFAAGLATEGYKPFVAIYSTFLQRAYDQVVHDVAL 412

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRF MDRAGLVGADGPTH GSFD+ F+ C+PNMV+MA +DEA+L HMVAT AA DD
Sbjct: 413 QKLPVRFCMDRAGLVGADGPTHAGSFDIAFLGCIPNMVLMAAADEADLVHMVATQAATDD 472

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G GV +P   +G+PLE+GKGRIL EG +VAL  YGT +  CLAA+  L 
Sbjct: 473 APTALRYPRGEGTGVTVP--LEGVPLEIGKGRILREGHKVALFSYGTRLGECLAAADELA 530

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           ++GL  TVADARF KPLD  L+  LA+ HEVLITVEEGS+GGFGS  +Q LA+ GLLD  
Sbjct: 531 AHGLATTVADARFAKPLDIDLLTRLAREHEVLITVEEGSVGGFGSFCLQALAEAGLLDRG 590

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K RPLVLPD YIDH +     A+AGL    I A VF  LG+
Sbjct: 591 LKVRPLVLPDCYIDHDTQPAMYAKAGLDRRGIVAKVFEALGK 632


>gi|407782057|ref|ZP_11129272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
 gi|407206530|gb|EKE76481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
          Length = 639

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/640 (61%), Positives = 484/640 (75%), Gaps = 13/640 (2%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           PTP+LD +  P  MK+ SI +L  LA +LR + I  VS+TGGHLG+ LGV+ELTVA+H+V
Sbjct: 5   PTPVLDKVTTPADMKDFSIDQLTALAGDLRRETIDAVSRTGGHLGAGLGVVELTVAIHHV 64

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           F+ P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSSTS
Sbjct: 65  FDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTS 124

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           ISAGLGMAV RDL+G  NNV+AVIGDG+M+AG AYEAMNNAG +DS +IVILNDN  +S+
Sbjct: 125 ISAGLGMAVARDLQGGDNNVIAVIGDGSMSAGMAYEAMNNAGSMDSRLIVILNDN-DMSI 183

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ LSRL +++  R LRE  K +  +   P+   A + +EYARGM
Sbjct: 184 A--------PPTGAMSNYLSRLIASKSYRGLREAMKQMASRFPKPLENAARRAEEYARGM 235

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           ++G   TLFEE+G  YIGPVDGH++  LV IL+ +++    GPVL+HVVTEKGRG+P+++
Sbjct: 236 VTGG--TLFEEMGFLYIGPVDGHDISHLVPILKSLRDRPEAGPVLLHVVTEKGRGHPFSK 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            + +KYH V KFD  TG Q K+ A   SYT  FA+ALI EAE D+ +VAI AAM GGTGL
Sbjct: 294 DSPEKYHAVQKFDLVTGAQVKAKANAPSYTNVFAQALIQEAEADERIVAITAAMPGGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  RFP R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QR YDQVVHDV +Q+L
Sbjct: 354 DKFAERFPDRSFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQRL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAGLVGADG TH GSFDV ++ CLP+ V+MA +DEAEL HMVATAAAIDDRPS
Sbjct: 414 PVRFAIDRAGLVGADGATHAGSFDVAYLGCLPDFVLMAAADEAELVHMVATAAAIDDRPS 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GVELP   +G PLE+GKGR++ EG  VA+L YG  +Q CLAA+  L   G
Sbjct: 474 AVRYPRGEGTGVELPA--RGQPLEIGKGRVMREGTAVAILSYGARLQECLAAAEELAGYG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+  LA+ HEVLIT+EEGS+GGFGS V+Q LA  G+LD  ++ 
Sbjct: 532 LSATVADARFAKPLDTGLVERLARGHEVLITIEEGSVGGFGSFVLQHLATSGMLDAGLRV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           RP+VLPDR+IDH SP  Q A+AGL    I  T    LG++
Sbjct: 592 RPMVLPDRFIDHDSPEKQYAEAGLNADGIVRTALAALGRS 631


>gi|357517201|ref|XP_003628889.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355522911|gb|AET03365.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 521

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/518 (73%), Positives = 441/518 (85%)

Query: 199 MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD 258
           MAV RDL G+KN+V++VIGDGAMTAGQAYEAMNNAG++DS++IVILNDNKQVSLPTATLD
Sbjct: 1   MAVARDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLD 60

Query: 259 GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS 318
           GP  PVGALSS LS++Q++R  R+LRE  K +TKQIGG  H +A+KVD+YAR  ISGSGS
Sbjct: 61  GPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGS 120

Query: 319 TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKY 378
           +LFEELG+YYIGP+DGHN++DLV I E+VK     GPVLIH+VTEKG+GYP A  AAD+ 
Sbjct: 121 SLFEELGMYYIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAADRM 180

Query: 379 HGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 438
           HGV KFDP TG QFK    T +YT YFA++LI EAE+D  +VAIHAAMGGGTGLN F +R
Sbjct: 181 HGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKR 240

Query: 439 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAM 498
           FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAM
Sbjct: 241 FPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAM 300

Query: 499 DRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 558
           DRAGLVGADGPTHCG+FD+TFMACLPNM+VMAPSDEAEL +MVATAAAIDDRPSCFR+PR
Sbjct: 301 DRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPR 360

Query: 559 GNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVA 618
           GNGIG  LP  NKG PLE+GKGRIL+EG RVA+LGYG  VQ C+ A+ +L + G+ +TVA
Sbjct: 361 GNGIGANLPLNNKGTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVA 420

Query: 619 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 678
           DARFCKPLD  LIR LA+ HE+LITVEEGSIGGFGSHV QFL+  GLLDG +K R ++LP
Sbjct: 421 DARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLP 480

Query: 679 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           DRYIDHG+P DQ+ +AGL+  HI ATV ++L   +EAL
Sbjct: 481 DRYIDHGAPNDQIDEAGLSSKHILATVLSLLDMPKEAL 518


>gi|209885785|ref|YP_002289642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|337740631|ref|YP_004632359.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
 gi|386029648|ref|YP_005950423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM4]
 gi|209873981|gb|ACI93777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|336094716|gb|AEI02542.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM4]
 gi|336098295|gb|AEI06118.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
          Length = 638

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/641 (62%), Positives = 486/641 (75%), Gaps = 14/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD IN P  ++ L   EL QLA ELRA+ I  V+ TGGHLGS LGV+ELTVALH+VF
Sbjct: 5   TPLLDQINCPSDLRKLKESELTQLAQELRAETINTVAVTGGHLGSGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKR+ESEYDCFGT HSSTSI
Sbjct: 65  NTPDDRIIWDVGHQAYPHKILTSRRDRIRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G   +VVAVIGDGAM+AG AYEAMNNAG +DS +IVILNDN ++S+ 
Sbjct: 125 SAGLGMAVARDLAGENRSVVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS L+RL S+   R LRE+ K V +++   M + A + +EYARGMI
Sbjct: 184 --------PPVGAMSSYLTRLTSSNAYRSLREIGKQVARRLPKFMEKGAQRAEEYARGMI 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   TLFEELG YY+GP+DGHN+D L+ +L+ V+++K  GP L+HVVT+KG+GY +AE 
Sbjct: 236 SGG--TLFEELGFYYVGPIDGHNLDQLLPVLKNVRDSKV-GPTLVHVVTQKGKGYSHAET 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYHGV KFD ATGKQ K+ A   SYT+ F   L   AE D  +V I AAM  GTG++
Sbjct: 293 AKDKYHGVVKFDVATGKQNKAKANAPSYTSVFGSTLARLAETDDKIVGITAAMPSGTGID 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF +  P R FDVGIAEQHAVTFAAGLA EG+KPF A+YS+F+QRAYDQVVHDV +Q+LP
Sbjct: 353 LFQKVHPERTFDVGIAEQHAVTFAAGLATEGMKPFVALYSTFLQRAYDQVVHDVAIQRLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADGPTH GSFD+ ++ CLP+MV+MA +DEAEL HMVATAAAI+DRPS 
Sbjct: 413 VRFVIDRAGLVGADGPTHAGSFDIAYLGCLPDMVIMAAADEAELVHMVATAAAINDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG+G+G++LP   +  PLE+GKGRI+ EG  VA+L  GT +   L A+ +L+S+GL
Sbjct: 473 FRFPRGDGVGIDLP--TEPTPLEIGKGRIVREGSSVAILSLGTRLAESLKAADILKSHGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA  HEVLIT+EEGSIGGFG+HV+  LA+ G+LD  +K R
Sbjct: 531 TTTVADARFAKPLDTDLVLKLAHEHEVLITIEEGSIGGFGAHVLHLLAEHGVLDKGLKVR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +VLPD +ID  SPA   A+AGL    I   VF  LG+  E
Sbjct: 591 SMVLPDVFIDQDSPAAMYAKAGLDAKGIVTRVFEALGRENE 631


>gi|55733939|gb|AAV59446.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
          Length = 885

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/440 (86%), Positives = 408/440 (92%)

Query: 281 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 340
           R L  +  GVTKQIGG +HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 442 RVLHRLRHGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 501

Query: 341 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 400
           + IL EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 502 ITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 561

Query: 401 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 460
           YT YFAEALIAEAE D  VVAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 562 YTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 621

Query: 461 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 520
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 622 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 681

Query: 521 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 580
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKG
Sbjct: 682 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKG 741

Query: 581 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 640
           R+L+EGERVALLGYG+AVQ CLAA++L+E +GL++TVADARFCKPLD  LIR LA SHEV
Sbjct: 742 RVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEV 801

Query: 641 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 700
           L+TVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 802 LLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 861

Query: 701 IAATVFNILGQTREALEIMS 720
           IAATVFN+LGQ REAL IM+
Sbjct: 862 IAATVFNVLGQAREALAIMT 881



 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/247 (82%), Positives = 218/247 (88%), Gaps = 21/247 (8%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           E  EYHSQRPPTPLLDT+NYPIHMKNLS++EL+QLADELR+DVIF+VSKTGGHLGSSLGV
Sbjct: 59  EAAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGV 118

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           +ELTVALHYVFN P+D+ILWDVGHQ+YPHKILTGRRDKM TMRQT+GLSGFTKRSESEYD
Sbjct: 119 VELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYD 178

Query: 183 CFGTGHSSTSISAGL---------------------GMAVGRDLKGRKNNVVAVIGDGAM 221
            FGTGHSST+ISA L                     GMAVGRDLKG KNNVVAVIGDGAM
Sbjct: 179 SFGTGHSSTTISAALGNLLFFLQSLCIELPAYVRLAGMAVGRDLKGGKNNVVAVIGDGAM 238

Query: 222 TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLR 281
           TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPLR
Sbjct: 239 TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLR 298

Query: 282 ELREVAK 288
           ELREVAK
Sbjct: 299 ELREVAK 305


>gi|389697003|ref|ZP_10184645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
 gi|388585809|gb|EIM26104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
          Length = 635

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/639 (62%), Positives = 485/639 (75%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD+I  P  ++ L   +L+Q+ADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 3   TPLLDSIKTPDDLRQLPENQLRQVADELRTETISAVSVTGGHLGAGLGVVELTVALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKRSESEYD FG  HSSTSI
Sbjct: 63  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRQADGLSGFTKRSESEYDPFGAAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL+G++NNV+AVIGDGAM+AG AYEAMNNAG + S +IVILNDN  +S+ 
Sbjct: 123 SAGLGMAVARDLEGKRNNVIAVIGDGAMSAGMAYEAMNNAGAMHSRLIVILNDN-DMSIA 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+SS L+RL S    R +RE AK + K++   +++ AAK +E+ARG  
Sbjct: 182 --------PPTGAMSSYLARLVSGGTYRGIRETAKQLAKKLPKFIYDKAAKAEEFARGFW 233

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T+FEELG YY+GP+DGHN+D L+ IL+ V++T T GP+L+HVVT+KG+GY  AE 
Sbjct: 234 TGG--TMFEELGFYYVGPIDGHNLDHLLPILKNVRDTGT-GPILVHVVTKKGKGYAPAEA 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGV  FD  TG Q K+ A   SYT  F E+LI EA+ D  +VA+ AAM  GTG++
Sbjct: 291 AADKYHGVVTFDVVTGAQTKAKANAPSYTKVFGESLIKEAQADDKIVAVTAAMPSGTGID 350

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + FP R FDVGIAEQHAVTFAAG+A EG KPFCAIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 351 LFGKEFPARTFDVGIAEQHAVTFAAGMATEGYKPFCAIYSTFLQRAYDQVVHDVAIQNLP 410

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDV ++ CLPNMVVMA +DEAEL HMVATAAA D  P  
Sbjct: 411 VRFALDRAGLVGADGATHAGSFDVAYLGCLPNMVVMAAADEAELVHMVATAAAHDSGPIA 470

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+GV++P   KGIPL +GKGR++ EG R+ALL  GT +   L A+  LE+ GL
Sbjct: 471 FRYPRGEGVGVDMP--EKGIPLAIGKGRVVKEGSRIALLSLGTRLAESLKAAEELEARGL 528

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             TVADARF KPLD  LI +LA+ HEVL+TVEEGSIGGFGS+V+Q LA  G LD G++K 
Sbjct: 529 STTVADARFAKPLDEELILALARDHEVLVTVEEGSIGGFGSYVLQLLADKGALDRGSLKV 588

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R +VLPD Y D   P    A+AGL  + I   VF  LGQ
Sbjct: 589 RSMVLPDIYQDQDKPERMYAKAGLDAAGIVTKVFEALGQ 627


>gi|374341516|gb|AEZ35186.1| 1-deoxy-D-xylulose 5-phosphate synthase-II [Botryococcus braunii]
          Length = 771

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/652 (60%), Positives = 492/652 (75%), Gaps = 8/652 (1%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  +  P TPLLDTI  P+ +KN S+ EL+ L  ELRAD+I  VS+TGGHLGSSLGV EL
Sbjct: 97  EEWNNGPETPLLDTIKSPLGLKNYSMPELRALCKELRADIIHTVSQTGGHLGSSLGVAEL 156

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVFN P D+I+WDVGHQ Y HKILTGRR +M T+RQ  GLSGFTKRSESEYD FG
Sbjct: 157 TVALHYVFNCPYDKIIWDVGHQAYGHKILTGRRAQMPTIRQYKGLSGFTKRSESEYDAFG 216

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD-MIVIL 244
            GHSSTSISA LGMAVGRD K + N+ +AVIGDGA+T G AYEA+N+AG++ +D MIVIL
Sbjct: 217 AGHSSTSISAALGMAVGRDFKNQNNHAIAVIGDGAITGGMAYEALNHAGFMKTDKMIVIL 276

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDNKQVSLPT    G   PVGAL++ L+ +Q++  LRE+RE  K   +Q+  P+ + A  
Sbjct: 277 NDNKQVSLPTQYNAGDQKPVGALAATLAEIQADPNLREIRETIKNFAEQMPAPIRDFAKA 336

Query: 305 VDEYARGMIS-GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTE 363
           VD+    ++S  SG+ LF++L L+YIGPVDGH+V  LV +L++VK     GPVLIH++TE
Sbjct: 337 VDDVGHDILSQNSGAKLFKDLKLWYIGPVDGHDVGLLVKVLQDVKKRPDMGPVLIHILTE 396

Query: 364 KGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 423
           KGRGY  AE + D+ HGV K+D  TGK   S+++++SYT  +A++L AEA +D  ++A+H
Sbjct: 397 KGRGYEPAETSMDRMHGVGKYDTKTGKALPSTSKSKSYTNVYADSLAAEAALDPKILAVH 456

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
           AAMGGGTG+N F +RF +R FDVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QRA+DQ+
Sbjct: 457 AAMGGGTGMNRFEKRFASRTFDVGIAEQHAVTFAAGLASEGLKPFCAIYSTFLQRAFDQI 516

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           +HDV LQ LPVRFA+DR GLVGADG TH G  DVT+MAC+PNMVVMAPS+EAEL H VAT
Sbjct: 517 IHDVALQNLPVRFAIDRGGLVGADGATHGGFADVTYMACVPNMVVMAPSNEAELCHAVAT 576

Query: 544 AAAIDDRPSCFRYPRGNGIGVEL------PPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
           AAA +D PSCFR+PRG+GIGV++      P   KG P E+GKG I   G+  ALLGYGT 
Sbjct: 577 AAAYNDGPSCFRFPRGDGIGVDMEAEGVDPKSFKGQPWEIGKGVIRRLGKHAALLGYGTM 636

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           V  CLAA+  L   G+ + V D RFCKPLD  L+   AK++ ++ITVEE +IGGFGSHV 
Sbjct: 637 VNDCLAAAEELAKKGIDVAVMDMRFCKPLDTQLVEQAAKNYPIVITVEENAIGGFGSHVA 696

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
             L + GLLD  VK+R ++LPDRYIDHG+ A Q  +AGL  + I A V +++
Sbjct: 697 NHLVKTGLLDTAVKFRSMILPDRYIDHGTQAQQREEAGLNTTTIVAKVESLM 748


>gi|338973838|ref|ZP_08629200.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|338232565|gb|EGP07693.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 638

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/641 (62%), Positives = 489/641 (76%), Gaps = 14/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L   +L Q+A E+RA+ I  V+ TGGHLGS LGV+ELTVA+H+VF
Sbjct: 5   TPLLDAIKSPADLRKLKESDLPQVAAEVRAETINAVAVTGGHLGSGLGVVELTVAIHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKR+ESEYDCFG  HSSTSI
Sbjct: 65  NTPADRVIWDVGHQAYPHKILTERRDRIRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG +DS +IVILNDN ++S+ 
Sbjct: 125 SAGLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS LSRL S+   R LRE+ K V K++   + + A + +EYARGM+
Sbjct: 184 --------PPVGAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   TLFEELG YY+GP+DGHN+D L+ +L+ V+++K  GP LIHVVTEKG+GY  AE 
Sbjct: 236 SGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDSKV-GPTLIHVVTEKGKGYTPAEA 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV KFD ATGKQ K+ A   +YT  F  +L+ EAE D  +VAI AAM  GTG++
Sbjct: 293 SADKYHGVVKFDVATGKQAKAQANAPAYTKVFGNSLVQEAEKDNKIVAITAAMPSGTGVD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EGLKPF AIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 353 IFNKAFPDRTFDVGIAEQHAVTFAAGLASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADGPTH GSFD+T++ CLP MV+MA +DEAEL HMVATAAAIDDRPS 
Sbjct: 413 VRFIIDRAGLVGADGPTHAGSFDITYLGCLPGMVLMAAADEAELVHMVATAAAIDDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            R+PRG+G+GV+LP  + G+PLE+GKGRI+ EG  VALL  GT +   L A+ +L+++GL
Sbjct: 473 IRFPRGDGVGVDLP--SVGVPLEIGKGRIVREGSSVALLSLGTRLGEALKAADILKTHGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D  L+  LA+ H+VL+T+EEGSIGGFG+ V+  LA++G LD  +K R
Sbjct: 531 TATVADARFAKPIDTDLVLRLARDHDVLVTIEEGSIGGFGAQVLHTLAENGALDKGLKVR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +VLPD +ID  SPA   A+AGL    I   VF  LG+  E
Sbjct: 591 SMVLPDTFIDQDSPAAMYAKAGLDAKGIVTRVFEALGREGE 631


>gi|414166173|ref|ZP_11422407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
 gi|410894933|gb|EKS42719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
          Length = 638

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/641 (62%), Positives = 489/641 (76%), Gaps = 14/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L   +L Q+A E+RA+ I  V+ TGGHLGS LGV+ELTVA+H+VF
Sbjct: 5   TPLLDAIKSPADLRKLKESDLPQVAAEVRAETINAVAVTGGHLGSGLGVVELTVAIHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKR+ESEYDCFG  HSSTSI
Sbjct: 65  NTPADRVIWDVGHQAYPHKILTERRDRIRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG +DS +IVILNDN ++S+ 
Sbjct: 125 SAGLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS LSRL S+   R LRE+ K V K++   + + A + +EYARGM+
Sbjct: 184 --------PPVGAMSSYLSRLTSSNTYRSLREIGKQVAKRLPKFVEKGAQRAEEYARGML 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   TLFEELG YY+GP+DGHN+D L+ +L+ V+++K  GP LIHVVTEKG+GY  AE 
Sbjct: 236 SGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDSKV-GPTLIHVVTEKGKGYTPAEA 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV KFD ATGKQ K+ A   +YT  F  +L+ EAE D  +VAI AAM  GTG++
Sbjct: 293 SADKYHGVVKFDVATGKQAKAQANAPAYTKVFGNSLVHEAEKDNKIVAITAAMPSGTGVD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EGLKPF AIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 353 IFNKAFPDRTFDVGIAEQHAVTFAAGLASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADGPTH GSFD+T++ CLP MV+MA +DEAEL HMVATAAAIDDRPS 
Sbjct: 413 VRFIIDRAGLVGADGPTHAGSFDITYLGCLPGMVLMAAADEAELVHMVATAAAIDDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            R+PRG+G+GV+LP  + G+PLE+GKGRI+ EG  VALL  GT +   L A+ +L+++GL
Sbjct: 473 IRFPRGDGVGVDLP--SVGVPLEIGKGRIVREGSSVALLSLGTRLGEALKAADILKTHGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D  L+  LA+ H+VLIT+EEGSIGGFG+ V+  LA++G LD  +K R
Sbjct: 531 TATVADARFAKPIDTDLVLRLARDHDVLITIEEGSIGGFGAQVLHTLAENGALDKGLKVR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +VLPD +ID  SPA   A+AGL    I   VF  LG+  E
Sbjct: 591 SMVLPDTFIDQDSPAAMYAKAGLDAKGIVTRVFEALGREGE 631


>gi|392378578|ref|YP_004985738.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
 gi|356880060|emb|CCD01007.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
          Length = 638

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/637 (62%), Positives = 482/637 (75%), Gaps = 13/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD ++ P  ++ L   +L+Q+ADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 7   TPLLDLVHTPADLRALKPEQLRQVADELRTETISAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
             P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFT RSES YD FG GHSSTSI
Sbjct: 67  QTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRTGGGLSGFTNRSESAYDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RD  GR N+V+AVIGDGAM+AG AYEAMNNAG  +S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDQLGRDNHVIAVIGDGAMSAGMAYEAMNNAGSANSKLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S++P   LR +AK + +Q+  P+   A + +EYARGM+
Sbjct: 186 --------PPVGAMSAYLSRLISSKPYLSLRHLAKDIAEQLPRPLRTAARRAEEYARGMV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEE+G YYIGP+DGHN+D L+ +L+ V++     PVLIHVVT+KG+GY  AE 
Sbjct: 238 TGG--TLFEEMGFYYIGPIDGHNLDHLLPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADK H VAKFD  TG Q K  +   +YT  FA ALIAEAE D  V+AI AAM  GTGL+
Sbjct: 296 SADKLHAVAKFDVVTGAQSKPKSNAPTYTRVFANALIAEAERDPGVLAITAAMPSGTGLD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF +RFP RCFDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQVVHDV LQ+LP
Sbjct: 356 LFGQRFPDRCFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH G+FDV ++ CLP++V+MA +DE EL HMVAT+AAIDDR S 
Sbjct: 416 VRFALDRAGLVGADGATHAGAFDVAYLGCLPDIVLMAAADELELMHMVATSAAIDDRASA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+ELP   +G  L +GKGRIL EG +VA+L YGT +     A+A L + GL
Sbjct: 476 LRYPRGEGVGLELP--ERGEVLPIGKGRILQEGTKVAILSYGTRLAEARKAAAELGARGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+R LA  HEVLIT+EEGS+GGFGS V+Q LA  GLLDG +K R
Sbjct: 534 STTVADARFAKPLDEELVRRLALEHEVLITIEEGSVGGFGSFVLQHLAMAGLLDGGLKIR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           P+VLPDR++DH SPA Q  +AGL   HI AT    LG
Sbjct: 594 PMVLPDRFLDHDSPARQYEEAGLAARHIVATALQALG 630


>gi|209963899|ref|YP_002296814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
           SW]
 gi|226801550|sp|B6IRB5.1|DXS_RHOCS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|209957365|gb|ACI98001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
           SW]
          Length = 642

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/637 (62%), Positives = 485/637 (76%), Gaps = 13/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+N P  ++ L   +L+Q ADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 7   TPLLDTVNTPEDLRKLDPSQLRQFADELRTETINAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ESEYD FG GHSSTSI
Sbjct: 67  NTPADRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAVGRD  G KN+V+ VIGDG+++AG AYEAMNNAG ++S MIVILNDN  +S+ 
Sbjct: 127 SAALGMAVGRDQLGHKNHVICVIGDGSISAGMAYEAMNNAGAMNSRMIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S  LSRL S+R  R LRE+ K V +++  P+ E A + +EYARG +
Sbjct: 186 --------PPVGAMSGYLSRLISSRQYRGLRELGKQVAERLPRPLQEAARRAEEYARGFV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEE+G YY+GP+DGHN+D L+ +LE +++ + TGPVLIH VT+KGRGY  AE+
Sbjct: 238 TGG--TLFEEMGFYYVGPIDGHNLDHLLPVLENIRDDQGTGPVLIHAVTQKGRGYGPAER 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADK H V+KFD  TG Q K+ A   SYT  FA++LI EAE D  VVAI AAM  GTGL+
Sbjct: 296 SADKLHAVSKFDVITGAQAKAKANAPSYTRVFADSLIQEAEADSRVVAITAAMPSGTGLD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF +RFP R +DVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 356 LFEKRFPDRTYDVGIAEQHAVTFAAGLAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVG+DG TH GSFDV ++ C+PN+V+MA +DEAEL HMVATAAA D  P  
Sbjct: 416 VRFAIDRAGLVGSDGCTHAGSFDVAYLGCVPNIVIMAAADEAELKHMVATAAAYDHGPIA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+E+P   +G  LE+GKGRI+ EG +VA+L  GT ++  L A+  L + GL
Sbjct: 476 VRYPRGEGVGLEMP--ERGQVLEIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNARGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D ALIR LA+ HEVLITVEEGSIGGFGS+V+ FLAQ GLLD  +K R
Sbjct: 534 STTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           P+VLPD + D  +PA Q  +AGL   HI  T    LG
Sbjct: 594 PMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630


>gi|242043234|ref|XP_002459488.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
 gi|241922865|gb|EER96009.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
          Length = 517

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/520 (74%), Positives = 442/520 (85%), Gaps = 4/520 (0%)

Query: 199 MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD 258
           MAV RDL GRKN+V++VIGDGAMTAGQAYEAMNN+G+LD++MIV+LNDNKQVSLPTATLD
Sbjct: 1   MAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGFLDANMIVVLNDNKQVSLPTATLD 60

Query: 259 GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS 318
           GP  PVGALS AL++LQS+   R LRE AK VTKQIGGP HE+AAKVDEYARGMIS  GS
Sbjct: 61  GPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKVDEYARGMISAWGS 120

Query: 319 TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKY 378
           +LFEELGLYYIGPVDGH+V+DLV I E+VK     GPVLIH+VTEKG+GY  AE AAD+ 
Sbjct: 121 SLFEELGLYYIGPVDGHSVEDLVTIFEKVKAMPAPGPVLIHIVTEKGKGYLPAEAAADRM 180

Query: 379 HGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 438
           HGV KF+P+TGKQ KS + T SYT YFAE+L+     DK VVAIHAAMGGGTGLN F +R
Sbjct: 181 HGVVKFEPSTGKQLKSKSSTLSYTQYFAESLMGG---DK-VVAIHAAMGGGTGLNYFQKR 236

Query: 439 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAM 498
           FP RCFDVGI EQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFA+
Sbjct: 237 FPERCFDVGITEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAL 296

Query: 499 DRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 558
           D AGLVGADGPTHCG+FDVT+MACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PR
Sbjct: 297 DHAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPR 356

Query: 559 GNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVA 618
           GNG+G  LP GNKG PLEVG+GR+L+ G RVALLGYGT VQ+CL A+  L+ + + +TVA
Sbjct: 357 GNGVGAVLPAGNKGTPLEVGRGRVLVGGNRVALLGYGTMVQACLKAAEALKEHDVYVTVA 416

Query: 619 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 678
           DARFCKPLD  LIR LA  HEVLIT EEGSIGGFGSHV  +L+  GLLDG +K R + LP
Sbjct: 417 DARFCKPLDTGLIRELAAEHEVLITAEEGSIGGFGSHVGHYLSLTGLLDGPLKLRSMFLP 476

Query: 679 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           DRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA+++
Sbjct: 477 DRYIDHGAPQDQMEEAGLTPRHIAATVLSLLGRPLEAMQL 516


>gi|16226685|gb|AAL16232.1|AF428463_1 AT4g15560/dl3821w [Arabidopsis thaliana]
          Length = 428

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/427 (88%), Positives = 407/427 (95%)

Query: 290 VTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN 349
           +TKQIGGPMH+LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+
Sbjct: 1   MTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKS 60

Query: 350 TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEAL 409
           T+TTGPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++ +TQSYTTYFAEAL
Sbjct: 61  TRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEAL 120

Query: 410 IAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 469
           +AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC
Sbjct: 121 VAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 180

Query: 470 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVM 529
           AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VM
Sbjct: 181 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVM 240

Query: 530 APSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERV 589
           APSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERV
Sbjct: 241 APSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERV 300

Query: 590 ALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI 649
           ALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSI
Sbjct: 301 ALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSI 360

Query: 650 GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           GGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++
Sbjct: 361 GGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLI 420

Query: 710 GQTREAL 716
           G  REAL
Sbjct: 421 GAPREAL 427


>gi|307941538|ref|ZP_07656893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
 gi|307775146|gb|EFO34352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
          Length = 639

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/643 (63%), Positives = 476/643 (74%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + +P TPLLD I  P  M++LS  EL QLADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TSKPHTPLLDQIKTPADMRSLSESELIQLADELRAETIDAVSMTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVFN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKR ESEYD FG  H
Sbjct: 62  IHYVFNTPEDRLIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRDESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDLKG  NNV+AVIGDGAM+AG AYEAMNNAG LDS +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLKGGDNNVIAVIGDGAMSAGMAYEAMNNAGSLDSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L++L S    + LR  AK   K    P+ E AAK +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLAKLVSGPTYQSLRGAAKNFAKNFPKPLQEKAAKAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG  +G   TLFEE+G YY+GPVDGHN++ L+ IL+ V++T   GPVLIH VT+KG+GY
Sbjct: 233 ARGFWTGG--TLFEEMGFYYVGPVDGHNLEHLLPILKNVRDTHN-GPVLIHAVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGVAKFD  TGKQ K  A   SYT  FA +LI EAE D  +V + AAM  
Sbjct: 290 APAEGAKDKYHGVAKFDVITGKQAKPKANAPSYTNVFATSLIKEAEHDDKIVTVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF   FP R FDVGIAEQH VTFAAGLA EG KPFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLNLFQDAFPDRTFDVGIAEQHGVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAGLVGADGPTH GSFD  ++ACLPN VVMA +DE EL HMVATAAA D
Sbjct: 410 IQNLPVRFPIDRAGLVGADGPTHAGSFDTAYLACLPNFVVMAAADEVELRHMVATAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P  FRYPRG G+G+++P   +G  LE+GKG +  EG +VAL  +GT +  CL A+  L
Sbjct: 470 DGPISFRYPRGEGVGLDMP--ERGSVLEIGKGVVRKEGSKVALFSFGTRMAECLKAAEEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           +  GL  TVADARF KPLD  L+  LA+ HEVL+TVEEGS+GGFGSHV+  LAQ G LD 
Sbjct: 528 DIAGLSTTVADARFAKPLDVDLLLRLAREHEVLVTVEEGSVGGFGSHVLGMLAQHGALDK 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R L LPDRYID G P     +AGL+ + I  TVF  LG+
Sbjct: 588 GLKIRTLCLPDRYIDQGKPDGMYEEAGLSAAGIMKTVFEALGR 630


>gi|414172488|ref|ZP_11427399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
 gi|410894163|gb|EKS41953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
          Length = 638

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/641 (61%), Positives = 489/641 (76%), Gaps = 14/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ +   +L Q+A ELRA+ I  V+ TGGHLGS LGV+ELTVA+H+VF
Sbjct: 5   TPLLDAIKSPADLRKMKESDLPQVAAELRAETISAVAVTGGHLGSGLGVVELTVAIHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKR+ESEYDCFG  HSSTSI
Sbjct: 65  NTPSDRVIWDVGHQAYPHKILTERRDRIRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G + N+VAVIGDGAM+AG AYEAMNNAG +DS +IVILNDN ++S+ 
Sbjct: 125 SAGLGMAVARDLAGEERNIVAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S+   R LRE+ K V K++   + + A + +EYARG +
Sbjct: 184 --------PPVGAMSAYLSRLTSSNTYRSLREIGKQVAKRLPKFIEKGAQRAEEYARGFL 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   TLFEELG +Y+GP+DGHN+D L+ +L+ V+++K  GP LIHVVTEKG+GY  AE 
Sbjct: 236 SGG--TLFEELGFFYVGPIDGHNLDHLLPVLKNVRDSKV-GPTLIHVVTEKGKGYTPAET 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV KFD ATGKQ K+ A   +YT  F ++L+ EAE D  +VAI AAM  GTG++
Sbjct: 293 SADKYHGVVKFDVATGKQAKAQANAPAYTKVFGQSLVQEAEKDDKIVAITAAMPSGTGVD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQH VTFAAGLA EGLKPF AIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 353 IFGKAFPERTFDVGIAEQHGVTFAAGLASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADGPTH GSFD+ ++ CLP MV+MA +DEAEL HMVATAAAI+DRPS 
Sbjct: 413 VRFIIDRAGLVGADGPTHAGSFDLAYLGCLPGMVLMAAADEAELVHMVATAAAINDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            R+PRG+G+GV+LP  + G+PLE+GKGRI+ EG  VAL+  GT +Q CL A+ +L+++GL
Sbjct: 473 IRFPRGDGVGVDLP--SVGVPLEIGKGRIVREGSSVALVSLGTRLQECLKAADILKTHGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D  LI  LA+ H+VL+T+EEGSIGGFG+ V+  LA++G LD  +K R
Sbjct: 531 TTTVADARFAKPIDTDLILRLARDHDVLVTIEEGSIGGFGAQVLHTLAENGALDKGLKVR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +VLPD +ID  SPA   A+AGL    I   VF  LG+  E
Sbjct: 591 SMVLPDTFIDQDSPAAMYAKAGLDAKGIVTRVFEALGREGE 631


>gi|357385547|ref|YP_004900271.1| 1-deoxy-d-xylulose-5-phosphate synthase [Pelagibacterium
           halotolerans B2]
 gi|351594184|gb|AEQ52521.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pelagibacterium
           halotolerans B2]
          Length = 647

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/652 (61%), Positives = 491/652 (75%), Gaps = 15/652 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLDTI  P  +K L   EL +LA+ELRA+VI  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SDKPATPLLDTIGSPADLKALKRDELIELANELRAEVIDAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH++F+ P DRI++DVGHQ YPHK+LTGRR+++ T+RQ DGLSGFTKR ESEYD FG GH
Sbjct: 62  LHHIFDTPNDRIIFDVGHQAYPHKVLTGRRNRIRTLRQKDGLSGFTKRGESEYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAVG DLKG K NVVAVIGDGA++AG AYEAMNNAG +D+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVGSDLKGEKRNVVAVIGDGAISAGMAYEAMNNAGAMDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDE 307
            +S+         PP GA+S+ L++L S    R LR+ AK     +  P + + A K +E
Sbjct: 181 DMSIA--------PPTGAMSAYLAKLVSGPAYRGLRDAAKQFVDSVMPPFIKDKARKTEE 232

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           YARG  +G   TLFEELG YY+GP+DGHN+D L+ +L  V++ +T GP+LIHVVT+KG+G
Sbjct: 233 YARGFWTGG--TLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAET-GPILIHVVTQKGKG 289

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE++ADKYHGV+KF+  TG Q K+ +   SYT+ FA++LIAEA+ D+ +VAI AAM 
Sbjct: 290 YAPAEESADKYHGVSKFNVITGAQAKAPSNAPSYTSVFADSLIAEAQKDEAIVAITAAMP 349

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
           GGTG++ F + FP R FDVGIAEQHAVTFAAGLA EGLKPFC IYS+F+QRAYDQVVHDV
Sbjct: 350 GGTGIDKFSKHFPERSFDVGIAEQHAVTFAAGLATEGLKPFCTIYSTFLQRAYDQVVHDV 409

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +QKLPVRF +DRAG VGADGPTH GSFD+T++A LP+MVVMA  DEAEL HMVATAAA 
Sbjct: 410 AIQKLPVRFPIDRAGYVGADGPTHAGSFDITYLATLPSMVVMAAGDEAELRHMVATAAAY 469

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DD P  FRYPRG G+GVE+P    G+PL +GKGR+L EG  +ALL  GT +  C+AA+  
Sbjct: 470 DDGPIAFRYPRGEGVGVEMP--EAGVPLTIGKGRVLKEGTTIALLSLGTRLAECMAAAET 527

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L + G   TVADARF KPLD  L+  LA+ H VLITVEEG+IGGFGSHV   +AQ GLLD
Sbjct: 528 LGTYGFSTTVADARFAKPLDEELLARLAREHAVLITVEEGAIGGFGSHVATRMAQLGLLD 587

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
             +K+RPL++PDRYI+     D  AQAGL  S I AT    LG    A +++
Sbjct: 588 NGLKFRPLLMPDRYIEQAGQGDMYAQAGLDRSGIVATALTALGDETNAAQVL 639


>gi|407777509|ref|ZP_11124778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
           pht-3B]
 gi|407300758|gb|EKF19881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
           pht-3B]
          Length = 640

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/643 (61%), Positives = 485/643 (75%), Gaps = 14/643 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + YP  +K L+  +L QLADELRA++I  VSKTGGHLG+ LGV+ELTVALHY
Sbjct: 7   PDTPLLDEVVYPADLKRLAEEKLPQLADELRAELIDAVSKTGGHLGAGLGVVELTVALHY 66

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DRI+WDVGHQ YPHKI+TGRRD++ T+RQ  GL GFTKR+ESEYD FGT HSST
Sbjct: 67  VFDTPDDRIIWDVGHQAYPHKIITGRRDRIRTLRQEGGLYGFTKRAESEYDPFGTAHSST 126

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV RDL+G K NV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S
Sbjct: 127 SISAGLGMAVARDLRGEKRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMS 185

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R  + +RE+ K +T  +G  +     +  E+ARG
Sbjct: 186 IA--------PPQGAMSAYLARLASGRTYQGVRELGKKLTSYLGKGVDRAVTRAVEHARG 237

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G ++IGP+DGHN+  LV +L+ V++    GPVLIHVVT+KG+GYP A
Sbjct: 238 YVTGG--TLFEEMGFFHIGPIDGHNLKHLVPVLKNVRDNGD-GPVLIHVVTKKGKGYPPA 294

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E A DKYHGV KFD  TG Q K+ A   SYT  FA++L+ EA  D+ +VA+ AAM  GTG
Sbjct: 295 EAAEDKYHGVNKFDVITGAQAKAPANAPSYTKVFAQSLVQEARADERIVAVTAAMPSGTG 354

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF   FP R FDVGIAEQHAVTFAAG+A EGL+PF AIYS+F+QRAYDQVVHDV LQ 
Sbjct: 355 LDLFGTEFPERTFDVGIAEQHAVTFAAGMATEGLRPFAAIYSTFLQRAYDQVVHDVALQN 414

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAG VGADGPTHCG+FD+T++A LPNM VMA +DEAEL HMV TAA  D  P
Sbjct: 415 LPVRFAIDRAGFVGADGPTHCGAFDITYLASLPNMAVMAAADEAELRHMVRTAAEYDAGP 474

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG+G+GV++P   +G  L +G+GR+L EG +VALL  G  +Q CL A+  L++ 
Sbjct: 475 IAFRYPRGDGVGVDMP--ERGEVLAIGRGRVLREGSKVALLSLGGRLQDCLRAAEELDAA 532

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD ALIR LA+ HEVLIT+EEGSIGGFGSHV+ FLA +GLL+  VK
Sbjct: 533 GLSTTVADARFAKPLDEALIRHLAREHEVLITIEEGSIGGFGSHVLNFLAHEGLLESGVK 592

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            RP+ +PDR+I+H  P   +  AGL  + I  TVF  LGQ  E
Sbjct: 593 VRPMTMPDRFINHAKPERMIEDAGLDAAAIVRTVFAALGQHAE 635


>gi|449441938|ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449499272|ref|XP_004160772.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 717

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/672 (58%), Positives = 492/672 (73%), Gaps = 19/672 (2%)

Query: 55  NGVCA--SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKT 112
           + VC   SL +       + PTPLLD I+ PIH+KNLS++ELKQLA+E+R+++   +S  
Sbjct: 57  SSVCKIHSLPDIDNIFWDKVPTPLLDVIDNPIHLKNLSLKELKQLAEEIRSELASFLSNV 116

Query: 113 GGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSG 172
                +SL V+ELTVALH+VF+AP D+ILWD G +TY HKILTGRR  M T+ + +GLSG
Sbjct: 117 PASYKASLAVVELTVALHHVFHAPVDKILWDAGEETYAHKILTGRRPLMSTLYKKNGLSG 176

Query: 173 FTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNN 232
            T R ESE+D FG  H   S+SAGLGMAV RD+KG++  +V +I + +   GQ YEAM+N
Sbjct: 177 STSRLESEFDPFGAAHGCNSVSAGLGMAVARDIKGKRERIVTIINNLSTMTGQIYEAMSN 236

Query: 233 AGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK 292
            GYLDS+MIVILND++  SL     DG    V ALSS LSRLQS++  R+ RE AKGVTK
Sbjct: 237 VGYLDSNMIVILNDSRH-SLHPKLDDGSKTSVSALSSTLSRLQSSKSFRKFREAAKGVTK 295

Query: 293 QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKT 352
           +IG  MHELAAKVD+YARGM+  SGSTLFEELGLYYIGPVDGHN++DL+ +L+EV +  +
Sbjct: 296 RIGKGMHELAAKVDQYARGMMGPSGSTLFEELGLYYIGPVDGHNMEDLICVLQEVASLDS 355

Query: 353 TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAE 412
            GPVL+HVVTE+     Y   A  +  G+   DP     +   +RT  Y   FAEAL+ E
Sbjct: 356 MGPVLVHVVTEENYSEGYKRVAGRQLDGLYNIDPLL---YGIDSRT--YGDCFAEALVVE 410

Query: 413 AEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIY 472
           AE DK +V +HA M     + LF  RFP + FDVG+AEQHAVTFAAGL+C GLKPFC I 
Sbjct: 411 AEKDKSIVTVHAGMQMEPSIQLFRERFPDKFFDVGMAEQHAVTFAAGLSCGGLKPFCVIP 470

Query: 473 SSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPS 532
           S+F+QRAYDQVVHDVD Q++PVRF +  AGLVG+DGPT CG+FD+T+M+CLPNM+VMAPS
Sbjct: 471 SAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPTQCGAFDITYMSCLPNMIVMAPS 530

Query: 533 DEAELFHMVATAAAIDDRPSCFRYPRG-----NGIGVELPPGNKGIPLEVGKGRILIEGE 587
           DE EL HMVATAA IDD+P CFRYPRG     N + +E      G+P+E+GKGR+L EG+
Sbjct: 531 DENELVHMVATAARIDDQPVCFRYPRGSIVTTNNLALE------GVPIEIGKGRVLAEGK 584

Query: 588 RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG 647
            +ALLGYG  VQ+CL A ALL   G+ +TVADARFCKPLD AL+R L  +H  LITVEEG
Sbjct: 585 DIALLGYGAMVQNCLNARALLSKFGVEVTVADARFCKPLDIALLRQLCDNHAFLITVEEG 644

Query: 648 SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
           S+GGFGSHV QF+A DG LDG VKWRP+VLPD YI+  SP  QL+ AGLT +HIAAT  +
Sbjct: 645 SVGGFGSHVAQFIALDGRLDGRVKWRPIVLPDNYIEQASPQQQLSLAGLTGNHIAATALS 704

Query: 708 ILGQTREALEIM 719
           +LG+ REAL +M
Sbjct: 705 LLGRPREALLMM 716


>gi|392377749|ref|YP_004984908.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
 gi|356879230|emb|CCD00134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
          Length = 643

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/638 (62%), Positives = 478/638 (74%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +  P+ ++ L  R+L+QLADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 10  TPLLDRVRTPVDLRRLKPRQLRQLADELRTETISAVSVTGGHLGAGLGVVELTVALHYVF 69

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFT+R+ES YD FG  HSST++
Sbjct: 70  DTPADRLIWDVGHQCYPHKILTGRRDRIRTLRTGGGLSGFTRRTESVYDPFGAAHSSTAM 129

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RD  GR+N+VVAV+GDGAM+AG AYEAMNN G  DS +IV+LNDN      
Sbjct: 130 SAGLGMAVARDRLGRRNHVVAVVGDGAMSAGMAYEAMNNIGSGDSRVIVVLNDNNM---- 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALS+ LSRL S++P   LR  A+ +   +  P+   A + +EYARGM+
Sbjct: 186 -----SIAPPVGALSAYLSRLISSKPFLTLRHFAEDLAGHMPRPLRTAARRAEEYARGMV 240

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEE+G YYIGP+DGHN+D L+ +L+ V++     PVLIHVVT+KG+GY  AE 
Sbjct: 241 TGG--TLFEEMGFYYIGPIDGHNLDHLLPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEA 298

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADK H VAKFD  TG Q K  +   +YT  FA ALIAEAE D  V+AI AAM  GTGL+
Sbjct: 299 SADKLHAVAKFDVVTGAQSKPKSNAPTYTRVFANALIAEAERDPGVLAITAAMPSGTGLD 358

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF +RFP RCFDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQVVHDV LQ+LP
Sbjct: 359 LFGQRFPDRCFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLP 418

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH G+FDV ++ CLP++V+MA +DE EL HMVAT+AAIDDR S 
Sbjct: 419 VRFALDRAGLVGADGATHAGAFDVAYLGCLPDIVLMAAADELELMHMVATSAAIDDRVSA 478

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+ELP   +G  L +GKGRIL EG +VA+L YGT +     A+A L + GL
Sbjct: 479 LRYPRGEGVGLELP--ERGEVLPIGKGRILQEGTKVAILSYGTRLAEARKAAAELGARGL 536

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+R LA  HEVLIT+EEGS+GGFGS V+Q LA  GLLDG +K R
Sbjct: 537 STTVADARFAKPLDEDLVRRLALEHEVLITIEEGSVGGFGSFVLQHLAMAGLLDGGLKIR 596

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           P+VLPDR++DH SPA Q  +AGL   HI AT    LG 
Sbjct: 597 PMVLPDRFLDHDSPARQYEEAGLAARHIVATALQALGN 634


>gi|413945325|gb|AFW77974.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
          Length = 442

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/434 (86%), Positives = 408/434 (94%)

Query: 287 AKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEE 346
           ++GVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +
Sbjct: 5   SQGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILND 64

Query: 347 VKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFA 406
           VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFA
Sbjct: 65  VKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFA 124

Query: 407 EALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLK 466
           EALIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLK
Sbjct: 125 EALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLK 184

Query: 467 PFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNM 526
           PFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNM
Sbjct: 185 PFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNM 244

Query: 527 VVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG 586
           VVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG
Sbjct: 245 VVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEG 304

Query: 587 ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 646
           +RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEE
Sbjct: 305 DRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEE 364

Query: 647 GSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           GSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VF
Sbjct: 365 GSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVF 424

Query: 707 NILGQTREALEIMS 720
           NILGQ REAL IM+
Sbjct: 425 NILGQNREALAIMA 438


>gi|209886012|ref|YP_002289869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|337740417|ref|YP_004632145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|386029434|ref|YP_005950209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM4]
 gi|209874208|gb|ACI94004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|336094502|gb|AEI02328.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM4]
 gi|336098081|gb|AEI05904.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
          Length = 636

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/638 (61%), Positives = 484/638 (75%), Gaps = 14/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD++  P  ++ LS  +L QLADELR +++  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 5   TPLLDSVPTPDKLRALSPEQLPQLADELRREMVDAVSVTGGHLGAGLGVVELTVALHYVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGF KR+ESEYD FGT HSSTSI
Sbjct: 65  NTPADRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL+G  NNV+AVIGDG+M+AG AYEAMNNAG L+S +IVILNDN  +S+ 
Sbjct: 125 SAGLGMAVARDLQGGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ L+RL S++     RE+ K + +++    H+   + +EYARGM+
Sbjct: 184 --------PPVGAMSAYLARLISSQTYGTAREILKTIAQRMPKFFHDRTLRAEEYARGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G    LFEELGL+Y+GP+DGHN+D L+ +L  V+++ T GPVLIHVVT+KG+GY  AE+
Sbjct: 236 AGG--MLFEELGLFYVGPIDGHNLDHLLPVLTNVRDSGT-GPVLIHVVTKKGKGYAPAEE 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           + D+YHGV KFD ATGKQFK+ + T SYT+ F  +L+ EA+ D  +VAI  AM GGTG++
Sbjct: 293 SDDRYHGVVKFDVATGKQFKAKSNTPSYTSVFGNSLVKEAQKDDKIVAITGAMPGGTGID 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV +Q LP
Sbjct: 353 IFGKAFPDRTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVAIQNLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADGPTH GSFD T++ CLPN ++MA  DEA+L HM+AT   ID+ PS 
Sbjct: 413 VRFAIDRAGLVGADGPTHAGSFDNTYLGCLPNFIIMAAGDEADLVHMIATQTGIDNAPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GVELP  + G+PLE+GKGR+L EG +VAL  +GT +  CL A+  LES GL
Sbjct: 473 LRYPRGEGLGVELP--DVGVPLEIGKGRVLREGSKVALFSFGTRLGECLKAADDLESRGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA+SHEVLIT+EEGS+GGFG+HV+Q LA  G LD  +K R
Sbjct: 531 STTVADARFLKPLDTDLLLKLARSHEVLITIEEGSVGGFGTHVIQALADHGALDKGLKIR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +VLPD +ID  SPA    QAGL    I A V   LG 
Sbjct: 591 SMVLPDIFIDQDSPAKMYEQAGLDAKAIVAKVLETLGN 628


>gi|316932492|ref|YP_004107474.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           DX-1]
 gi|315600206|gb|ADU42741.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           DX-1]
          Length = 641

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/642 (61%), Positives = 484/642 (75%), Gaps = 13/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT ALHYVF
Sbjct: 7   TPLLDTIRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES++D FG GHSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV  +L G+KNNV+AVIGDG+++AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE  K + K +   + + AA+ +EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G G TLFEELG YY+GPVDGHN+D L+ IL+ V++  T GP LIHVVT+KG+GY  AE 
Sbjct: 238 MGGG-TLFEELGFYYVGPVDGHNLDHLLPILQNVRDADT-GPFLIHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH V KFD ATG Q K+ +   SY   F ++L+ EAE D  +V I AAM  GTG++
Sbjct: 296 AADKYHAVVKFDIATGAQSKAKSNAPSYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQ+VHDV +QKLP
Sbjct: 356 IFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AIDDRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P  + G+PLE+GKGR++ +G +VALL +GT +     A+  L + GL
Sbjct: 476 VRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA+ HEVLITVEEGSIGGFGSHV+Q LA+ G+LDG VK R
Sbjct: 534 STTVADARFMKPLDIELVLKLARDHEVLITVEEGSIGGFGSHVMQALAEHGMLDGQVKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            LVLPD ++DH +P    A+AGL    I   VF++LG   +A
Sbjct: 594 SLVLPDVFMDHDNPTAMYARAGLDAKAIVKKVFDVLGNDAKA 635


>gi|144900827|emb|CAM77691.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 637

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/644 (61%), Positives = 483/644 (75%), Gaps = 16/644 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           SQR    LLD ++ P   +  +  +L+QLADE+R ++I  VS TGGHLG+ LGV+ELTVA
Sbjct: 4   SQR----LLDGVDCPADTRAFTPEQLRQLADEVRQEMIEAVSITGGHLGAGLGVVELTVA 59

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF  P D+++WDVGHQ YPHKILTGR+D++ T+RQ  GLSGFTKRSES YD FG GH
Sbjct: 60  LHHVFQTPVDKLIWDVGHQCYPHKILTGRKDRIRTLRQGGGLSGFTKRSESAYDPFGAGH 119

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAVGRDLKG   NV+AVIGDGAM+AG  YEAMNNAG +DS ++VILNDN 
Sbjct: 120 SSTSISAGLGMAVGRDLKGEDFNVIAVIGDGAMSAGMVYEAMNNAGSMDSRLVVILNDN- 178

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ LSRL S+RP   +R  AK +   +  P+   A + +EY
Sbjct: 179 DMSIA--------PPVGAMSAYLSRLLSSRPYLSIRHFAKDLAAMLPPPLERAAKRAEEY 230

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG +SG G TLFEELG YY+GP+DGHN D L+ +L+ V++++   PVLIHVVT+KGRGY
Sbjct: 231 ARGFVSGGG-TLFEELGFYYVGPIDGHNFDHLLPVLKNVRDSEDNKPVLIHVVTKKGRGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE+AADKYHGV KFD  TG   K  A   SYT+ FA+AL+AEAE D  VVAI AAM  
Sbjct: 290 PPAEQAADKYHGVGKFDVVTGALAKPKANAPSYTSVFAQALLAEAENDDRVVAITAAMPA 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F  RFP RCFDVGIAEQHAVTFAAGLACEG KPFCA+YS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLDKFAERFPNRCFDVGIAEQHAVTFAAGLACEGFKPFCALYSTFLQRGYDQLVHDVV 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +QKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP++V+M+P+DE EL H VATA A+D
Sbjct: 410 IQKLPVRFAIDRAGLVGADGATHAGAFDLAYLGCLPDIVLMSPADELELMHAVATAKALD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           DRPS FRYPRG G+G++LP   +G  L +GKGRI+ EG RVALL  GT +   + A+  L
Sbjct: 470 DRPSAFRYPRGEGVGLDLP--VRGEVLPIGKGRIIREGSRVALLSLGTRLGEAMKAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KPLD  +I  LA+ HEVL+T+EEGSIGGFG+ V+ FLA  G LD 
Sbjct: 528 AARGLSTTVADARFMKPLDQDMILRLAREHEVLVTIEEGSIGGFGAQVLHFLAHSGALDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
            +K RPLVLPD +++H +P  Q   AGL   HI A V   LGQ+
Sbjct: 588 GLKVRPLVLPDVFLEHEAPLKQYDLAGLNAPHIVACVLAALGQS 631


>gi|414163311|ref|ZP_11419558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
 gi|410881091|gb|EKS28931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
          Length = 638

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/643 (60%), Positives = 482/643 (74%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           SQ   TPLLDTI  P  ++ L+  +L Q+ADELR +++  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SQTSTTPLLDTIPTPDKLRALTPEQLPQVADELRREMVDAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGF KR+ESEYD FGT H
Sbjct: 62  LHYVFNTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDL+   NNV+AVIGDG+M+AG AYEAMNNAG L+S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLQQGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L+RL S+      RE+ K +  ++     +   + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLARLISSETYGTAREILKNIAHRMPKFFQDRTLRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G    LFEELG++Y+GP+DGHN+D L+ +L  V++  T GPVLIHVVT+KG+GY
Sbjct: 233 ARGMVAGG--MLFEELGMFYVGPIDGHNLDHLLPVLTNVRDNGT-GPVLIHVVTKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE++ DKYHGV KFD ATGKQFK+ +   SYT+ F  +L  EA+ D  +VAI  AM G
Sbjct: 290 APAEESDDKYHGVVKFDVATGKQFKTKSNAPSYTSVFGNSLTKEAQKDDKIVAITGAMPG 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++F + FP R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV 
Sbjct: 350 GTGVDIFAKSFPERTFDVGIAEQHAVTFAAGLATEGYKPFCALYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADGPTH GSFD T++ CLPN+++MA  DEA+L HMVAT  AID
Sbjct: 410 IQNLPVRFAIDRAGLVGADGPTHAGSFDNTYLGCLPNLIIMAAGDEADLVHMVATQVAID 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + PS  RYPRG G+G+ELP  + G+PLE+GKGR+L +G +VAL  +GT +  CL A+  L
Sbjct: 470 NAPSALRYPRGEGLGLELP--DVGVPLEIGKGRVLRQGTKVALFSFGTRLGECLKAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVADARF KPLD  L   LA+SHEVLITVEEGSIGGFG+HV+Q LA  G LD 
Sbjct: 528 EAQGLSTTVADARFLKPLDIELTLKLARSHEVLITVEEGSIGGFGTHVIQALADHGALDK 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R +VLPD +ID  SPA    QAGL    I A VF  LG+
Sbjct: 588 GLKIRSMVLPDIFIDQDSPAKMYEQAGLDAKAIVAKVFEALGK 630


>gi|239831304|ref|ZP_04679633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           LMG 3301]
 gi|444308786|ref|ZP_21144428.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           M86]
 gi|239823571|gb|EEQ95139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           LMG 3301]
 gi|443487834|gb|ELT50594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           M86]
          Length = 638

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/646 (63%), Positives = 480/646 (74%), Gaps = 16/646 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L   +L QLA ELRA++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPLTPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VF+ P DRI+WDVGHQ YPHKILTGRRD++ T+RQT GLSGFTKRSESEYD FG  HSS
Sbjct: 63  HVFDTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRSESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  DL G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S +  R +RE AK V K++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ IL+ V++T+  GPVLIHVVT+KG+GYP 
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYPP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TG+Q K  A   SYT  F  +LI EA  D  +VAI AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGQQSKPPANAPSYTKIFGTSLIEEARHDDKIVAITAAMPSGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGFKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F++ LP  VVMA SDEAEL HMV TAA  ++ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLSALPGFVVMAASDEAELRHMVRTAAEYNEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           K R L LPD Y DHG P    A+AGL  + I   VF  LG  REA+
Sbjct: 589 KVRALTLPDSYQDHGKPDAMYAEAGLDRAGIVQAVFAALG--REAI 632


>gi|389876824|ref|YP_006370389.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
 gi|388527608|gb|AFK52805.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
          Length = 645

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/645 (60%), Positives = 480/645 (74%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLDT+  P  ++  +  +L+QLADELRA+ +  VS TGGHLG+ LGV+EL+VA
Sbjct: 2   SDRPSTPLLDTVRVPADIRGFNRDQLRQLADELRAETVSAVSVTGGHLGAGLGVVELSVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H+VF+ P+DR++WDVGHQ YPHKILTGRR+++ T+RQ DGLSGFTKR ESEYD FG  H
Sbjct: 62  IHHVFDTPRDRLIWDVGHQCYPHKILTGRRERIRTLRQKDGLSGFTKRDESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNN-VVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           SSTSISAGLGMAV   LKG +   V+AVIGDGAM+AG AYEAMNNAG +   +IVILNDN
Sbjct: 122 SSTSISAGLGMAVASRLKGEEERRVIAVIGDGAMSAGMAYEAMNNAGAMPDRLIVILNDN 181

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
             +S+         PP GA+S+ LSRL S+R  R LR++AK + +    P+ + A + +E
Sbjct: 182 -DMSIA--------PPTGAMSAYLSRLISSRSYRSLRDIAKQMARVFPKPLEQAARRAEE 232

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           +ARG+++G   TLFEELG YY+GP+DGHN+D L+ +L  V++    GPVLIH+VT+KG+G
Sbjct: 233 FARGLVTGG--TLFEELGFYYVGPIDGHNLDHLLPVLLNVRDADQDGPVLIHIVTQKGKG 290

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           YP AEKAADKYHGVAKFD  TG Q K +A   SYT  +A+ALIAEAE D  V+A+ AAM 
Sbjct: 291 YPPAEKAADKYHGVAKFDVVTGAQVKPAAGAPSYTNVYADALIAEAEHDPRVLAVTAAMP 350

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTGL+ F RRFP R FDVGIAEQHAVTFAAGLA EG+KPF  IYS+F+QRAYDQVVHDV
Sbjct: 351 TGTGLDRFGRRFPDRVFDVGIAEQHAVTFAAGLAAEGMKPFATIYSTFLQRAYDQVVHDV 410

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +Q+LPVRFA+DRAGLVGADG TH GSFD+T++ CLP+ VVMAP+DEAEL HMVATAA I
Sbjct: 411 AIQRLPVRFAIDRAGLVGADGATHMGSFDLTYLCCLPDFVVMAPADEAELMHMVATAAQI 470

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DDRPS  RYPRG G+GV LP   +G PLE+G+GRIL EG +VA+L  G+ V   L A   
Sbjct: 471 DDRPSAVRYPRGEGLGVPLP--ARGTPLEIGRGRILREGTKVAILALGSRVADALKAGEE 528

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L + G   TVADARF KP+D  L+R LA  HEVLIT+EE +IGGF S V Q L    L++
Sbjct: 529 LTARGYSTTVADARFAKPIDADLVRRLASEHEVLITIEENAIGGFASQVTQLLCDGALIE 588

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
             +K RP++LPD +IDH SP DQ+  AGL    I A     LG  
Sbjct: 589 RGLKLRPMMLPDLFIDHASPRDQVEMAGLGVQAIVAKALEALGHN 633


>gi|39934029|ref|NP_946305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           CGA009]
 gi|192289449|ref|YP_001990054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           TIE-1]
 gi|81563891|sp|Q6NB76.1|DXS_RHOPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229836076|sp|B3QFY7.1|DXS_RHOPT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|39647877|emb|CAE26396.1| 1-D-deoxyxylulose 5-phosphate synthase [Rhodopseudomonas palustris
           CGA009]
 gi|192283198|gb|ACE99578.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           TIE-1]
          Length = 641

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/638 (60%), Positives = 482/638 (75%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT ALHYVF
Sbjct: 7   TPLLDTIRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES++D FG GHSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV  +L G+KNNV+AVIGDG+++AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE  K + K +   + + AA+ +EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G G TLFEELG YY+GPVDGHN+D L+ IL+ V++  T GP LIHVVT+KG+GY  AE 
Sbjct: 238 MGGG-TLFEELGFYYVGPVDGHNLDHLLPILQNVRDADT-GPFLIHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH V KFD ATG Q K+ +   SY   F ++L+ EA+ D  +V I AAM  GTG++
Sbjct: 296 AADKYHAVVKFDIATGAQAKAKSNAPSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQ+VHDV +QKLP
Sbjct: 356 IFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AIDDRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    GIPLE+GKGR++ +G +VALL +GT +     A+  L + GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA+ HEVL+T+EEGSIGGFGSHV+Q LA+ G+LDG VK R
Sbjct: 534 STTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            LVLPD ++DH +P    A+AGL    I   VF++LG+
Sbjct: 594 ALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631


>gi|110633092|ref|YP_673300.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
 gi|118595588|sp|Q11KE0.1|DXS_MESSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|110284076|gb|ABG62135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
          Length = 650

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/649 (61%), Positives = 487/649 (75%), Gaps = 15/649 (2%)

Query: 68  HSQRPP-TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           H + PP TPLL+ + +P  +K +   +L QLA+ELRA++I  VS+TGGHLG+ LGV+ELT
Sbjct: 13  HLKSPPETPLLNRVRFPSDLKQIPEEDLPQLAEELRAEMIDAVSQTGGHLGAGLGVVELT 72

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALHY+F+ P DR++WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKRSESEYD FG 
Sbjct: 73  VALHYIFDTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRQEDGLSGFTKRSESEYDPFGA 132

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
            HSSTSISAGLGMAV R+L G + +V+AVIGDGA++AG AYEAMNNAG LD+ +IVILND
Sbjct: 133 AHSSTSISAGLGMAVARELSGGQRHVIAVIGDGALSAGMAYEAMNNAGALDARLIVILND 192

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N  +S+         PP GA+S+ L+RL S R  R +R+V K +T  +G        +  
Sbjct: 193 N-DMSIA--------PPTGAMSTYLARLASGRAYRGIRDVGKKLTSHLGKSFDRAITRAV 243

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           E+ARG ++G   TLFEE+G ++IGP+DGH+++ LV +L  V++  T GPVLIHVVT+KG+
Sbjct: 244 EHARGFVTGG--TLFEEMGFFHIGPIDGHDLEALVPVLRNVRDNGT-GPVLIHVVTQKGK 300

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GYP AE AADKYHGVAKFD  TG Q KS A   SYT  FA+AL+ EA  DK +VAI AAM
Sbjct: 301 GYPPAEAAADKYHGVAKFDVITGAQAKSPAGAPSYTKVFAQALVQEAREDKRIVAITAAM 360

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             GTGL+LF + FP R FDVGIAEQHAVTFAAGLA EG +PF AIYS+F+QRAYDQVVHD
Sbjct: 361 PSGTGLDLFEKEFPDRSFDVGIAEQHAVTFAAGLATEGYRPFAAIYSTFLQRAYDQVVHD 420

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V +Q LPVRFA+DRAG VGADG THCG+FDV ++A LPNMVVMA +DEAEL HMV TAA 
Sbjct: 421 VAIQNLPVRFAIDRAGFVGADGATHCGAFDVAYLATLPNMVVMAAADEAELKHMVRTAAD 480

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            D+ P  FRYPRG G GV LP   +G  L++GKGRI+ EG ++ALL  GT +  C+ A+ 
Sbjct: 481 HDEGPIAFRYPRGEGTGVPLP--QRGEILKIGKGRIVREGSKIALLSLGTRLADCMIAAE 538

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            LE+ GL  TVADARF KPLD  LIR LA+ HEVL+TVEEGSIGGFG+HV+ FLA +GLL
Sbjct: 539 ELEAAGLSTTVADARFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLL 598

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           +  +K RPLV+PD ++D   P    A+AGL  + I  TVF  LGQ  +A
Sbjct: 599 ENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647


>gi|153007892|ref|YP_001369107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
           49188]
 gi|166198634|sp|A6WWC4.1|DXS_OCHA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|151559780|gb|ABS13278.1| deoxyxylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
           49188]
          Length = 638

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/646 (63%), Positives = 479/646 (74%), Gaps = 16/646 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L   +L QLA ELRA++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPTTPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VF+ P DRI+WDVGHQ YPHKILTGRRD++ T+RQT GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFDTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  DL G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S +  R +RE AK V K++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ IL+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VAI AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQSKPPANAPSYTKIFGTSLIEEARHDDRIVAITAAMPSGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           K R L LPD Y DHG P    A+AGL  + I   VF  LG  REA+
Sbjct: 589 KVRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALG--REAV 632


>gi|90422661|ref|YP_531031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB18]
 gi|118595613|sp|Q21A74.1|DXS_RHOPB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|90104675|gb|ABD86712.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB18]
          Length = 641

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/643 (60%), Positives = 480/643 (74%), Gaps = 13/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S+   TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A
Sbjct: 2   SEFSKTPLLDTIRTPADLRKLRIDQVRQVADELRQETIEAVSVTGGHFGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  H
Sbjct: 62  IHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDL G KNNV+AVIGDG+++AG AYEAMNNAG ++S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLAGGKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ LSRL S +  R LRE  K + K +   + + AA+ +EY
Sbjct: 181 NMSIA--------PPVGAMSAYLSRLYSGKTYRTLREAGKQIGKHLPKLIADRAARAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           +RG + G G TLFEELG YY+GPVDGHN+D L+ IL+ V++  T GP LIHVVT+KG+GY
Sbjct: 233 SRGFMMGGG-TLFEELGFYYVGPVDGHNLDHLLPILQNVRDADT-GPFLIHVVTQKGKGY 290

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A+DKYH V KFD ATG Q K+ +   SY   F ++L+ EA+ D  +V I AAM  
Sbjct: 291 GPAEAASDKYHAVVKFDIATGAQAKAKSNAPSYQNVFGQSLVKEAQKDDKIVGITAAMPS 350

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++F + FPTR FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV 
Sbjct: 351 GTGIDIFEKAFPTRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVA 410

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFD  F+ CLPNMV+MA SDEAEL HMVAT  AI+
Sbjct: 411 IQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAIN 470

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           DRPS  RYPRG G GVE+P    GI LE+GKGRI+ EG ++ALL +GT +  C  A+  L
Sbjct: 471 DRPSAVRYPRGEGRGVEMP--EVGIALEIGKGRIVREGNKIALLSFGTRLAECEKAADEL 528

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  T+ADARF KPLD  L+  LA+ HE+L+T+EEGSIGGFGSHV+Q LA+ G+LDG
Sbjct: 529 ATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDG 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            V+ R LVLPD ++DH +P    A+AGL    I   VF  LG+
Sbjct: 589 EVRMRSLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631


>gi|404317422|ref|ZP_10965355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi
           CTS-325]
          Length = 638

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/646 (63%), Positives = 479/646 (74%), Gaps = 16/646 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L   +L QLA ELRA++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPTTPLLDKAQIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VF+ P DRI+WDVGHQ YPHKILTGRRD++ T+RQT GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFDTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  DL G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S +  R +RE AK V K++   + + A K +EYAR
Sbjct: 182 SIA--------PPTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ IL+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPILKNVRDTQE-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VAI AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQSKPPANAPSYTKIFGTSLIEEARHDDRIVAITAAMPSGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  ++ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYNEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           K R L LPD Y DHG P    A+AGL  + I   VF  LG  REA+
Sbjct: 589 KVRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALG--REAV 632


>gi|163842716|ref|YP_001627120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
 gi|189027769|sp|B0CKC0.1|DXS_BRUSI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|163673439|gb|ABY37550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
          Length = 643

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 TGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|337270073|ref|YP_004614128.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
           WSM2075]
 gi|336030383|gb|AEH90034.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
           WSM2075]
          Length = 637

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/644 (61%), Positives = 477/644 (74%), Gaps = 14/644 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++ L+  EL QLA ELR ++I  VS+TGGHLG+ LGV+ELTVALHY
Sbjct: 5   PQTPLLDKVRIPADLRALAESELPQLASELRLELIDAVSRTGGHLGAGLGVVELTVALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 65  VFDTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMA  RDL G +NNV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S +    LR+  K +T  +G        +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGKAYAGLRDFGKKLTSYLGKRADRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGHN++ L+ +L+ V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+ A   +YT  FAE+LI EA  D  +VA+ AAM GGTG
Sbjct: 293 EAAADKYHGVNKFDVITGTQAKAPANAPAYTKVFAESLIQEAREDDRIVAVTAAMPGGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF   FP R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV +QK
Sbjct: 353 LDLFGEVFPARTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADG THCG+FD TF+A LP  VVMA +DEAEL HMV TAA+ DD P
Sbjct: 413 LPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAASYDDGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG+GV++P   +G  LE+GKGRI+ EG +VALL +GT +Q CL A+  L + 
Sbjct: 473 IAFRYPRGNGVGVDMP--ERGSVLELGKGRIIREGTKVALLSFGTRLQDCLVAAEELGAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+SHEVL+TVEEG++GGF SHV+QFLA +GLL+  +K
Sbjct: 531 GLSTTVADARFAKPLDQDLIRRLARSHEVLVTVEEGAVGGFASHVLQFLAHEGLLESGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            RPLVLPD + DH  P    A AGL    I  TVF  LG T  A
Sbjct: 591 VRPLVLPDTFTDHAKPEKMYADAGLDADGIVRTVFTALGHTAHA 634


>gi|299134745|ref|ZP_07027937.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
 gi|298590555|gb|EFI50758.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
          Length = 638

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/643 (60%), Positives = 483/643 (75%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           SQ   TPLLDTI  P  ++ LS  +L Q+ADELR +++  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SQTSTTPLLDTIPTPDKLRALSPEQLPQVADELRREMVDAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGF KR+ESEYD FGT H
Sbjct: 62  LHYVFNTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFPKRAESEYDAFGTAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDL+   NNV+AVIGDG+M+AG AYEAMNNAG L+S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLQQGNNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L+RL S++     RE+ K +  ++     +   + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLARLISSQTYGTAREILKNIAHRMPKFFEDRTLRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G    LFEELG++Y+GP+DGHN+D L+ +L  V++  T GPVLIHVVT+KG+GY
Sbjct: 233 ARGMVAGG--MLFEELGMFYVGPIDGHNLDHLLPVLTNVRDNGT-GPVLIHVVTKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE++ D+YHGV KFD ATGKQFK+ +   SYT+ F  +L  EA+ D  +VAI  AM G
Sbjct: 290 APAEESDDRYHGVVKFDVATGKQFKTKSNAPSYTSVFGNSLTKEAQKDDKIVAITGAMPG 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++F + FP R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV 
Sbjct: 350 GTGVDIFAKSFPERTFDVGIAEQHAVTFAAGLATEGYKPFCALYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADGPTH G+FD T++ CLPN+++MA  DEA+L HMVAT  AID
Sbjct: 410 IQNLPVRFAIDRAGLVGADGPTHAGAFDNTYLGCLPNLIIMAAGDEADLVHMVATQVAID 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + PS  RYPRG G+G+ELP  + G+PLE+GKGR+L EG +VAL  +GT +  CL A+  L
Sbjct: 470 NAPSALRYPRGEGLGLELP--DVGVPLEIGKGRVLREGAKVALFSFGTRLGECLKAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ES GL  TVADARF KPLD  L   LA+SH+VLITVEEG+IGGFG+HV+Q LA  G LD 
Sbjct: 528 ESYGLSTTVADARFLKPLDIDLTLKLARSHDVLITVEEGAIGGFGTHVIQALADHGALDK 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            V+ R +VLPD +ID  SPA    QAGL    I A VF  LG+
Sbjct: 588 GVRVRSMVLPDIFIDQDSPAKMYEQAGLDAKAIVAKVFEALGK 630


>gi|407975808|ref|ZP_11156711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
           C115]
 gi|407428669|gb|EKF41350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
           C115]
          Length = 638

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/643 (61%), Positives = 484/643 (75%), Gaps = 14/643 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + YP  +K  S  +L  LA ELR+++I  VS+TGGHLG+ LGV+ELT+ALHY
Sbjct: 5   PDTPLLDKVAYPADLKRFSEDDLPALAAELRSELIDAVSRTGGHLGAGLGVVELTLALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GL GFTKR+ESEYD FGT HSST
Sbjct: 65  VFDTPADRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLYGFTKRTESEYDPFGTAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV RDLKG + NV+AVIGDGA++AG AYEAMNNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVARDLKGERRNVIAVIGDGALSAGMAYEAMNNAGSLDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R  + +RE+ K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPQGAMSAYLARLASGRAYQGVRELGKKLTAALGKGVDRAVTRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G ++IGP+DGHN+  LV +L+ V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEEMGFFHIGPIDGHNLRHLVPVLKNVRD-HGNGPVLIHVVTKKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E A DKYHGV +FD  TG Q K+ A   SYT  FA++LIAEA  D+ VVA+ AAM  GTG
Sbjct: 293 EAAEDKYHGVNRFDVITGAQAKAPANAPSYTKVFAQSLIAEAREDERVVAVTAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF + FP R FDVGIAEQHAVTFAAGLA EGLKPF AIYS+F+QRAYDQVVHDV LQ 
Sbjct: 353 LDLFGKEFPERTFDVGIAEQHAVTFAAGLATEGLKPFVAIYSTFLQRAYDQVVHDVALQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAG VGADGPTHCG+FDVT++A LPNMVVMA +DEAEL HMV TA   D  P
Sbjct: 413 LPVRFAIDRAGYVGADGPTHCGAFDVTYLASLPNMVVMAAADEAELRHMVRTACVHDAGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG+G+GV++P   +G  L +G+GR+L EG +VALL +G+ +Q CL A+  LE+ 
Sbjct: 473 IAFRYPRGDGVGVDMP--ERGDVLPIGRGRVLREGGKVALLSFGSRLQDCLKAAEELEAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  L+R LA+ HEVL+TVEEGSIGGFGSHV+ FLA +GLL+  +K
Sbjct: 531 GLSTTVADARFAKPLDEELVRRLARDHEVLLTVEEGSIGGFGSHVLNFLAHEGLLETGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            RPL +PDR++DH  P   +  AGL  + I  TVF  LGQ  E
Sbjct: 591 VRPLAMPDRFVDHAKPERMVEDAGLDAASIVRTVFTALGQRSE 633


>gi|365881074|ref|ZP_09420405.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 375]
 gi|365290782|emb|CCD92936.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 375]
          Length = 641

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/638 (60%), Positives = 481/638 (75%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + + +   +   A++V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYSPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH VAKFD ATG Q K+     +Y   F ++L+ EAE D  VV I AAM  GTG++
Sbjct: 296 AADKYHAVAKFDIATGTQAKAKPNAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA SDEAEL HMVAT  AIDDRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+PL +GKGR++ +G++VALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGVPLPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             ++ADARF KPLD  L+  LA+ HE+LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R
Sbjct: 534 SASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +VLPD + DH +PA   A+AGL    I   VF  LG+
Sbjct: 594 TMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631


>gi|367474105|ref|ZP_09473631.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 285]
 gi|365273603|emb|CCD86099.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 285]
          Length = 641

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/638 (59%), Positives = 481/638 (75%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + + +   +   A++V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYSPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH VAKFD ATG Q K+     +Y   F ++L+ EAE D  +V I AAM  GTG++
Sbjct: 296 AADKYHAVAKFDIATGTQAKAKPNAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFAKAFPKRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA SDEAEL HMVAT  AIDD+PS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDKPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+PL +GKGR++ +G+++ALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGVPLPIGKGRMIRQGKQIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             ++ADARF KPLD  LI  LA+ H++LIT+EEGSIGGFGSHV+QFLA  G+LDG +K R
Sbjct: 534 SASIADARFMKPLDEELIMKLAREHDILITIEEGSIGGFGSHVMQFLADQGMLDGGLKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +VLPD + DH +PA   A+AGL    I   VF  LG+
Sbjct: 594 SMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631


>gi|398821070|ref|ZP_10579560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
 gi|398228267|gb|EJN14399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
          Length = 642

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/643 (60%), Positives = 484/643 (75%), Gaps = 14/643 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLAGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + K++   +   A +V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQINKRLPKILANRANRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q KS     +Y   F ++L+ EAE D  +VAI AAM  GTG++
Sbjct: 296 SADKYHAVVKFDVATGTQAKSKPNAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G+E+P  + G+PLEVGKGR++ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 476 LRYPRGEGRGIEMP--DVGVPLEVGKGRMIRQGNKIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             ++ADARF KPLD  L+  LA+ H+VLITVEEGSIGGFGSHV Q+L   G+LD G VK+
Sbjct: 534 STSIADARFMKPLDTELVLKLARDHDVLITVEEGSIGGFGSHVAQYLTDQGVLDTGMVKF 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           R +VLPD + DH +PA   A+AGL    I A VF  LG+  +A
Sbjct: 594 RSMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGKDVKA 636


>gi|407770454|ref|ZP_11117823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
           M-5 = DSM 17429]
 gi|407286477|gb|EKF11964.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
           M-5 = DSM 17429]
          Length = 639

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/643 (60%), Positives = 477/643 (74%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S    TPLLDTI  P  +++L   ++KQ+ADELRA+VI  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   STTSKTPLLDTIKIPADLRSLQPAQMKQVADELRAEVIDAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HY+F+ P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG GH
Sbjct: 62  IHYLFDTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKG-RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           SSTSISAGLGMAV   L   ++ NV+AVIGDG+M+AG AYEAMNNA   D  MIVILNDN
Sbjct: 122 SSTSISAGLGMAVANQLSDDKRKNVIAVIGDGSMSAGMAYEAMNNAAAADQRMIVILNDN 181

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
             +S+         PPVG++S  LSRL S +  + LR  AKG+TK +   + E A K++E
Sbjct: 182 -DMSIA--------PPVGSMSGYLSRLISGKGYQGLRNAAKGLTKHLPRQIEEAARKIEE 232

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           Y RGM++G   TLFEE+G +Y+GP+DGHN+D L+ +L+ V++    GP+L+HVVT+KG+G
Sbjct: 233 YTRGMVTGG--TLFEEMGFFYVGPIDGHNLDHLLPVLKNVRDADVDGPILVHVVTQKGKG 290

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE AADKYHGVAKFD  TGKQ K++    SYT  + E L   AE D  + AI AAM 
Sbjct: 291 YGPAENAADKYHGVAKFDVVTGKQAKATPNAPSYTKVYGETLTKLAETDDKITAITAAMP 350

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTG+N+F  RFP R FDVGIAEQHAVTFAAG+ACEG KPFC +YS+F+QRAYDQVVHDV
Sbjct: 351 SGTGVNIFAERFPDRAFDVGIAEQHAVTFAAGMACEGYKPFCTLYSTFLQRAYDQVVHDV 410

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +Q LPVRFAMDRAGLVGADG TH G++D+ ++ CLPN+V+MA +DEAEL HM  TA AI
Sbjct: 411 VIQNLPVRFAMDRAGLVGADGATHAGAYDIAYLGCLPNIVLMAAADEAELVHMTTTAWAI 470

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DDRPS FRYPRG G+GVE+P   +G  LE+GKGRIL EG ++A+L YGT +   + A+  
Sbjct: 471 DDRPSAFRYPRGEGVGVEMPA--EGKVLEIGKGRILREGGKIAILSYGTRLAEAMLAAED 528

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L + GL  TVADARF KPLDHALI  LA++HEVLIT+EEGSIGGFG+ V+Q +A  GLLD
Sbjct: 529 LAARGLPATVADARFAKPLDHALIADLARNHEVLITIEEGSIGGFGAMVLQHMAGQGLLD 588

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             +K R + LPD  IDH  P  Q A+AGL    I  T    LG
Sbjct: 589 HGLKVRTMALPDALIDHDKPDIQYAKAGLDAQSIVKTALGALG 631


>gi|146339201|ref|YP_001204249.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. ORS
           278]
 gi|259645380|sp|A4YQ36.1|DXS_BRASO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146192007|emb|CAL76012.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 278]
          Length = 641

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/638 (59%), Positives = 482/638 (75%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRAESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + + +   +   A++V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYSPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH VAKFD ATG Q K+     +Y   F ++L+ EAE D+ +V I AAM  GTG++
Sbjct: 296 AADKYHAVAKFDIATGTQAKAKPNAPAYQNVFGQSLVKEAEKDEKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA SDEAEL HMVAT  AIDDRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+ L +GKGR++ +G++VALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             ++ADARF KPLD  L+  LA+ HE+LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R
Sbjct: 534 SASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +VLPD + DH +PA   A+AGL    I   VF +LG+
Sbjct: 594 SMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631


>gi|91978764|ref|YP_571423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB5]
 gi|123748724|sp|Q130G7.1|DXS_RHOPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91685220|gb|ABE41522.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB5]
          Length = 638

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/642 (60%), Positives = 478/642 (74%), Gaps = 13/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 4   TPLLDTIRTPEDLRKLRVDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 64  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDG+++AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 124 SAGLGMAVARDLAGGNNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE  K + K +   + + AA+ +EY+RG +
Sbjct: 183 --------PPVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFM 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G G TLFEELG YY+GP+DGHN+D L+ IL+ V++ +T GP LIHVVT+KG+GY  AE 
Sbjct: 235 MGGG-TLFEELGFYYVGPIDGHNLDHLLPILQNVRDAET-GPFLIHVVTQKGKGYAPAEA 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A+DKYH V KFD ATG Q K+ +   SY   F ++L+ EA  D  +V I AAM  GTG++
Sbjct: 293 ASDKYHAVVKFDIATGTQAKAKSNAPSYQNVFGQSLVKEAAKDDKIVGITAAMPSGTGID 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQVVHDV LQ LP
Sbjct: 353 IFEKAFPARTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA SDEAEL HMVAT  AI+DRPS 
Sbjct: 413 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P  + G+PLE+GKGR++ +G +VALL +GT +  C  A+  L + GL
Sbjct: 473 LRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELAALGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA  HE+LIT+EEGSIGGFG+HV+Q LA+ G LDG VK R
Sbjct: 531 STTVADARFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDGEVKMR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            +VLPD ++DH +P    A AGL    I   VF  LG+  +A
Sbjct: 591 AMVLPDVFLDHDTPTAMYANAGLDAKAIVKKVFEALGKEHKA 632


>gi|148253965|ref|YP_001238550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|259645379|sp|A5EEQ0.1|DXS_BRASB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146406138|gb|ABQ34644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 641

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/638 (59%), Positives = 481/638 (75%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + + +   +   A++V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GYP AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYPPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q K+     +Y   F ++L+ EAE D  VV I AAM  GTG++
Sbjct: 296 SADKYHAVVKFDVATGTQAKAKPNAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGFKPFCAIYSTFLQRGYDQIVHDVCIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA SDEAEL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+PL +GKGR++ +G++VALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGVPLPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             ++ADARF KPLD  L+  LA+ HE+LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R
Sbjct: 534 SASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +VLPD + DH +PA   A+AGL    I   VF  LG+
Sbjct: 594 SMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631


>gi|27377762|ref|NP_769291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 110]
 gi|41016964|sp|Q89RW1.1|DXS_BRAJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|27350907|dbj|BAC47916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 110]
          Length = 661

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/639 (60%), Positives = 480/639 (75%), Gaps = 14/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 26  TPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 85

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES+YD FG  HSSTSI
Sbjct: 86  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 145

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 146 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 204

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE AK + K++   +   A +V+EY+RG +
Sbjct: 205 --------PPVGAMSAYLSRLYSGKTYRTLREAAKQINKRLPKIIANRANRVEEYSRGFM 256

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE 
Sbjct: 257 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEE-GPILVHVVTQKGKGYGPAEA 314

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q K+     +Y   F ++L+ EA+ D+ +VAI AAM  GTG++
Sbjct: 315 SADKYHAVVKFDVATGTQAKAKPNAPAYQNVFGQSLVKEAQKDEKIVAITAAMPSGTGVD 374

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 375 IFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLP 434

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AIDDRPS 
Sbjct: 435 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSS 494

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G+E+P    GIPLE+GKGR++ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 495 LRYPRGEGRGIEMP--EVGIPLEIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHGL 552

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             T+ADARF KPLD  L+  LA+ HE+LIT+EEGS+GGFGSHV QFL   G LD G VK+
Sbjct: 553 STTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMVKF 612

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R +VLPD + DH +PA   A+AGL    I A VF  LG+
Sbjct: 613 RTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651


>gi|359793593|ref|ZP_09296338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
           CCNWXJ12-2]
 gi|359250198|gb|EHK53724.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
           CCNWXJ12-2]
          Length = 637

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/647 (61%), Positives = 482/647 (74%), Gaps = 14/647 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S+ P TPLLD +  P  ++ L   +L QLA ELRA++I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   SKPPKTPLLDKVRIPSDLRALPESQLPQLAAELRAELIDAVSQTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVF+ P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR ESEYD FG  H
Sbjct: 62  LHYVFDTPGDRLIWDVGHQAYPHKILTGRRDRIRTLRAEGGLSGFTKRQESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+ RDL GRKNNV++VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAMARDLTGRKNNVISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPSGAMSAYLARLASGRAYMGFRDFGKKLTSYLGKRVDRAVTRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEELG Y+IGP+DGHN++ LV +L  V++    GPVLIH+VT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEELGFYHIGPIDGHNLEHLVPVLRNVRDNGD-GPVLIHIVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A+DKYHGV KFD  TG Q K+ A   SYT  FAE+LI EA  D  +VAI AAM  
Sbjct: 290 APAEAASDKYHGVNKFDVITGAQAKAPANAPSYTKVFAESLIQEARDDDRIVAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+LF   FP+R FDVGIAEQHAVTFAAGLA EGLKPF AIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGLATEGLKPFVAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +QKLPVRF +DRAG VGADGPTHCG+FD T++A LP  VVMA +DEAEL HMV TAA  D
Sbjct: 410 IQKLPVRFPIDRAGFVGADGPTHCGAFDTTYLASLPGFVVMAAADEAELRHMVRTAAIYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRGNG+GV++P   +G+ LE+GKGRI+ EG +VALL +GT +Q CL A+  L
Sbjct: 470 EGPIAFRYPRGNGVGVDMP--ERGVALEIGKGRIVREGTKVALLSFGTRLQDCLLAAEEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KPLD  L+R LA+ HE+L+TVEEG+IGGF SHV+QFLA+DGLLD 
Sbjct: 528 AAAGLPTTVADARFAKPLDEDLVRRLARGHEMLVTVEEGAIGGFASHVLQFLARDGLLDS 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            +K RPLVLPD + DH  P    A AGL  + I  TVF  LG+T  A
Sbjct: 588 GLKVRPLVLPDAFTDHAKPEKMYADAGLDSAGIVRTVFAALGRTAHA 634


>gi|433776340|ref|YP_007306807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
           WSM2073]
 gi|433668355|gb|AGB47431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
           WSM2073]
          Length = 645

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/644 (61%), Positives = 478/644 (74%), Gaps = 14/644 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++ L+  +L QLA ELR ++I  VS+TGGHLG+ LGV+ELTVALHY
Sbjct: 13  PHTPLLDRVRVPADLRTLAESDLPQLASELRLELIDAVSRTGGHLGAGLGVVELTVALHY 72

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 73  VFNTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSST 132

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMA  RDL G +NNV++VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S
Sbjct: 133 SISAGLGMAAARDLSGGRNNVISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMS 191

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S +    LR+  K +T  +G        +  E+ARG
Sbjct: 192 IA--------PPTGAMSAYLARLASGKAYVGLRDFGKKLTSYLGKRADRAITRAVEHARG 243

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGHN++ L+ +L+ V++    GPVLIHVVT+KG+GY  A
Sbjct: 244 YVTGG--TLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGK-GPVLIHVVTQKGKGYAPA 300

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+ A   +YT  FAE+LI E   D  +VA+ AAM GGTG
Sbjct: 301 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLIQEGREDDRIVAVTAAMPGGTG 360

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF   FP+R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV +QK
Sbjct: 361 LDLFGEVFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 420

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADG THCG+FD TF+A LP  VVMA +DEAEL HMV TAA+ DD P
Sbjct: 421 LPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAASYDDGP 480

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG+GV++P   +G  LE+GKGR++ EG +VALL +GT +Q CL A+  L + 
Sbjct: 481 IAFRYPRGNGVGVDMP--ERGSVLEIGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAA 538

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+SHEVL+TVEEG+IGGF SHV+QFLA +GLL+  +K
Sbjct: 539 GLSTTVADARFAKPLDQDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLK 598

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            RPLVLPD + DH  P    A AGL  + I  TVF  LG T  A
Sbjct: 599 VRPLVLPDDFTDHAKPEKMYADAGLDVAGIVRTVFTALGHTVRA 642


>gi|85717532|ref|ZP_01048477.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
 gi|85695649|gb|EAQ33562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
          Length = 642

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/639 (59%), Positives = 481/639 (75%), Gaps = 14/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +L+Q+ADELR + I  VS TGGH G+ LGV+ELT A+HY+F
Sbjct: 7   TPLLDTIRTPADLRKLKVEQLRQIADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYIF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SASLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE AK + K +   + + A +V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKMIADRAERVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           + SG TLFEELG YY+GP+DGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GYP AE 
Sbjct: 238 TNSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH V KFD +TG Q KS     +Y   F ++L+ EAE D  +VAI AAM  GTG++
Sbjct: 296 AADKYHAVVKFDVSTGAQSKSKPNAPAYQNVFGQSLVKEAEKDDRIVAITAAMPSGTGVD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q LP
Sbjct: 356 IFNKAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  F+ CLPNMV+MA +DE+EL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADESELVHMVATQVAINDRPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+PL +GKGRI+ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             TVADARF KPLD  L+  LA+ H+VL+T+EEGSIGGFG+HV+Q L  +G LD G V+ 
Sbjct: 534 STTVADARFMKPLDEDLVLRLARDHDVLVTIEEGSIGGFGAHVLQTLTDNGALDTGLVRV 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R ++LPD ++DH +PA   A+AGL    I A VF  LG+
Sbjct: 594 RSMILPDEFLDHDTPAAMYARAGLDAKGIVAKVFEALGK 632


>gi|13476214|ref|NP_107784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium loti
           MAFF303099]
 gi|21263539|sp|Q985Y3.1|DXS_RHILO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|14026974|dbj|BAB53570.1| 1-D-deoxyxylulose 5-phosphate synthase [Mesorhizobium loti
           MAFF303099]
          Length = 637

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/644 (61%), Positives = 476/644 (73%), Gaps = 14/644 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++ L   EL QLA ELR +++  VS+TGGHLG+ LGV+ELTVALHY
Sbjct: 5   PHTPLLDKVRIPADLRALDESELPQLASELRLELVDAVSRTGGHLGAGLGVVELTVALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 65  VFNTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMA  RDL G +NNV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S +    LR+  K +T  +G        +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGKAYAGLRDFGKKLTSYLGKRADRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGHN++ L+ +L+ V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+ A   +YT  FAE+LI EA  D  +VA+ AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLIREAREDDRIVAVTAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF   FP+R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV +QK
Sbjct: 353 LDLFGEVFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADG THCG+FD TF+A LP  VVMA +DEAEL HMV TAAA DD P
Sbjct: 413 LPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAAAYDDGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG+GV++P   +G  LE+GKGR++ EG +VALL +GT +Q CL A+  L + 
Sbjct: 473 IAFRYPRGNGVGVDMP--ERGEVLELGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+SHEVL+TVEEG+IGGF SHV+QFLA +GLL+  +K
Sbjct: 531 GLSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            RPLVLPD + DH  P    A AGL  + I  TVF  L  T  A
Sbjct: 591 VRPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634


>gi|319784710|ref|YP_004144186.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170598|gb|ADV14136.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 637

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/644 (61%), Positives = 477/644 (74%), Gaps = 14/644 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD    P  ++ L+  EL QLA ELRA+++  VS+TGGHLG+ LGV+ELTVALHY
Sbjct: 5   PHTPLLDKARIPADLRMLAESELPQLASELRAELVDAVSRTGGHLGAGLGVVELTVALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 65  VFNTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMA  RDL G +NNV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S +    LR+  K +T  +G        +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGKAYIGLRDFGKKLTSYLGKRADRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGHN++ L+ +L+ V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+ A   +YT  FAE+L+ E   D  +VA+ AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLVQEGREDDRIVAVTAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF   FP+R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV +QK
Sbjct: 353 LDLFGEAFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADG THCG+FD TF+A LP  VVMA +DEAEL HMV TAA+ DD P
Sbjct: 413 LPVRFPIDRAGFVGADGATHCGAFDTTFLATLPGFVVMAAADEAELRHMVRTAASYDDGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG+GV++P   +G  LE+GKGRI+ EG +VALL +GT +Q CL A+  L + 
Sbjct: 473 IAFRYPRGNGVGVDMP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQDCLIAAEELGAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+SHEVL+TVEEG++GGF SHV+QFLA +GLL+  +K
Sbjct: 531 GLSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAVGGFASHVLQFLAHEGLLESGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            RPLVLPD + DH  P    A AGL  + I  TVF  LG T  A
Sbjct: 591 VRPLVLPDAFTDHAKPEKMYADAGLDAAGIVRTVFVALGHTVRA 634


>gi|386397241|ref|ZP_10082019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
           WSM1253]
 gi|385737867|gb|EIG58063.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
           WSM1253]
          Length = 642

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/643 (59%), Positives = 482/643 (74%), Gaps = 14/643 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIRTPDDLRKLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+VAK + +++   +   A +V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDVAKQINQRLPKILANRANRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILLHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q KS     +Y   F ++L+ EAE D  +VAI AAM  GTG++
Sbjct: 296 SADKYHAVVKFDVATGTQAKSKPNAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G+E+P    G+PLE+GKGRI+ EG ++ALL +GT +  C  A+  L ++GL
Sbjct: 476 LRYPRGEGRGIEMP--EIGVPLEIGKGRIVREGSKIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             T+ADARF KPLD  L+  LA+ HE+LIT+EEGS+GGFGSHV Q+L   G LD G V++
Sbjct: 534 STTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQYLTDQGALDSGLVRF 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           R +VLPD + DH +PA    +AGL    I A VF  LG+  +A
Sbjct: 594 RTMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|298294378|ref|YP_003696317.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
 gi|296930889|gb|ADH91698.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
          Length = 640

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/644 (61%), Positives = 484/644 (75%), Gaps = 14/644 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I  P  ++ L   +L QLA ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDMIREPADLRRLPEEQLAQLAAELREEMIDAVSVTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VF+ P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT R+ESEYD FG GHSS
Sbjct: 63  HVFDTPNDRLIWDVGHQCYPHKILTGRRERIRTLRQGGGLSGFTNRAESEYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV RDL G + NVV VIGDGAM+AG AYEAMNNAG +DS +IVILNDN  +
Sbjct: 123 TSISAGLGMAVARDLAGAQRNVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGA+S+ L+RL S    R LRE AK +T+ +   + + AA+ +E+AR
Sbjct: 182 SIA--------PPVGAMSAYLARLISGPTYRTLRETAKQLTRGLPRFLGKKAAQAEEFAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G  +G   TLFEELG YY+GP+DGHN+D L+ +L  V++  T GPVL+HVVT+KG+GYP 
Sbjct: 234 GFWTGG--TLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAPT-GPVLVHVVTQKGKGYPP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE++ADKYHGV +FD ATG Q K+++   +YT+ FAE+LI EA  D+ +VA+ AAM  GT
Sbjct: 291 AEESADKYHGVQRFDVATGAQKKAASNAPTYTSVFAESLIDEARRDERIVAVTAAMPAGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQ+VHDV +Q
Sbjct: 351 GLDLFGQAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQIVHDVAIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           +LPVRFA+DRAGLVGADG TH G+FD+  +A LP MVVMA +DEAEL HMVATAAA D+ 
Sbjct: 411 RLPVRFALDRAGLVGADGATHVGAFDIPMLATLPGMVVMAAADEAELVHMVATAAAYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG G+GVE P    G+PLE+G+GRI+ EG +VALL  GT + +CLAAS  L  
Sbjct: 471 PIAFRYPRGEGVGVERP--EHGVPLEIGRGRIVREGSKVALLSLGTRLAACLAASEQLAG 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KP+D  L+  LA+ HEVL+ VEEG+ GGFGSHV+  LA+ G LD  +
Sbjct: 529 FGLSTTVADARFAKPIDRELVLRLAREHEVLVIVEEGATGGFGSHVLTLLAEAGALDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           K R L LPDR+I+  SPA QL +AGL    I   VF  LG+  E
Sbjct: 589 KVRCLALPDRFIEQDSPAAQLTEAGLDTDGIVRGVFAALGRADE 632


>gi|288961626|ref|YP_003451936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
 gi|288913906|dbj|BAI75392.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
          Length = 637

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/642 (61%), Positives = 474/642 (73%), Gaps = 13/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD    P  ++ L   +L+Q ADELR + +  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDLCPTPAKLRALKPEQLRQFADELRTETVDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES++D FG GHSSTSI
Sbjct: 66  DTPYDRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESDHDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV   +KG + NV+AVIGDGAM+AG AYEAMNNA    S +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVASKMKGERRNVIAVIGDGAMSAGMAYEAMNNAASTKSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S++P   LR +AK +  Q+  P+   A + +EYARGM+
Sbjct: 185 --------PPVGAMSAYLSRLISSKPYLSLRHLAKEIADQLPRPLRNAARRAEEYARGMV 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG YYIGP+DGHN+D L+ +L+ V++     PVLIHVVT+KG+GY  AE+
Sbjct: 237 TGG--TLFEELGFYYIGPIDGHNLDHLLPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEE 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADK H VAKFD  TG Q K  +   +YT  FA++LIAEA  D  +V I AAM  GTGL+
Sbjct: 295 SADKLHAVAKFDVVTGTQSKPKSNAPTYTRVFAQSLIAEAAADPSIVGITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF  RFP RCFDVGIAEQHAVTFAAG+A EG KPFCAIYS+F+QRAYDQV+HDV LQ LP
Sbjct: 355 LFGERFPDRCFDVGIAEQHAVTFAAGMATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLP++V+MA +DE EL HMVAT AAIDDR S 
Sbjct: 415 VRFALDRAGLVGADGATHAGSFDTAYLGCLPDIVLMAAADELELMHMVATQAAIDDRASA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+ELP   +G  L +GKGRIL EG ++A+L YGT +     A+A L + GL
Sbjct: 475 LRYPRGEGVGLELP--ERGGLLPIGKGRILQEGTKIAILSYGTRLGEARRAAAELAARGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             T+ADARF KPLD  L+R LA  HEVLIT+EEGS+GGFGS V+QFLA  GLLDG +K R
Sbjct: 533 STTLADARFAKPLDEDLVRRLALEHEVLITIEEGSVGGFGSFVLQFLAMAGLLDGGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           P+VLPD Y+DH SPA Q   AGLT  HI  T    LG    A
Sbjct: 593 PMVLPDLYLDHDSPAKQYEAAGLTAQHIVRTALQALGMESAA 634


>gi|374573936|ref|ZP_09647032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
 gi|374422257|gb|EHR01790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
          Length = 642

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/643 (59%), Positives = 482/643 (74%), Gaps = 14/643 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIRTPDDLRKLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+VAK + +++   +   A +V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDVAKQINQRLPKILANRANRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILLHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q KS     +Y   F ++L+ EAE D  +VAI AAM  GTG++
Sbjct: 296 SADKYHAVVKFDVATGTQAKSKPNAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G+E+P    G+PLE+GKGRI+ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 476 LRYPRGEGRGIEMP--EVGVPLEIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             T+ADARF KPLD  L+  LA+ HE+LIT+EEGS+GGFGSHV Q+L   G LD G V++
Sbjct: 534 STTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQYLTDQGALDSGLVRF 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           R +VLPD + DH +PA    +AGL    I A VF  LG+  +A
Sbjct: 594 RTMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|384220819|ref|YP_005611985.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 6]
 gi|354959718|dbj|BAL12397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 6]
          Length = 642

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/643 (59%), Positives = 482/643 (74%), Gaps = 14/643 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI+ P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIHTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + K++   +   A +V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQINKRLPKIIANRANRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q K+     +Y   F ++L+ EA+ D  +VAI AAM  GTG++
Sbjct: 296 SADKYHAVVKFDVATGTQAKAKPNAPAYQNVFGQSLVKEAQKDDKIVAITAAMPSGTGVD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AIDDRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G+E+P    G+PLEVGKGR++ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 476 LRYPRGEGRGIEMP--EVGVPLEVGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             ++ADARF KPLD  L+  LA+ HE+LIT+EEGS+GGFGSHV Q+L   G LD G VK+
Sbjct: 534 STSIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQYLTDQGALDSGMVKF 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           R +VLPD + DH +PA    +AGL    I A VF  LG+  +A
Sbjct: 594 RSMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|408537469|gb|AFU75320.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Aquilaria sinensis]
          Length = 712

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/655 (58%), Positives = 483/655 (73%), Gaps = 9/655 (1%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++ PTPLLD +  PIH+KNLSI+EL+QLADE+R ++   + KT   + SSL  +ELT
Sbjct: 64  FFGEKVPTPLLDVVESPIHLKNLSIKELRQLADEIRLELSSIIPKTQKSIKSSLAAVELT 123

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VA+H+VF AP D+ILWD   QT+ HKILTGRR  ++++ +T  L  F  +SE+EYD FG 
Sbjct: 124 VAIHHVFQAPVDKILWDSVEQTHAHKILTGRRSCLNSLTKTSNLPSFASQSENEYDPFGA 183

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GH  +SISAGLGMA  RD+KG++  VV VI +    AGQ YEAM+NAGYLD +M+VILND
Sbjct: 184 GHGCSSISAGLGMAAARDIKGKRERVVTVINNDTTMAGQVYEAMSNAGYLDCNMVVILND 243

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           ++  SL     +GP   +  LSS LS++QS++  R  REVAKGVTK+IG  MHE AAKVD
Sbjct: 244 SRH-SLHPKIEEGPKTSINMLSSTLSKIQSSKSFRTFREVAKGVTKRIGRGMHEWAAKVD 302

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EYARGMI   GSTLFEELGLYYIGPVDGHN++DLV +L+EV +  +TGPVL+HV+TE+  
Sbjct: 303 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLVGVLQEVASLDSTGPVLVHVITEENE 362

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
                +K   K  G+ +    +   F S+   ++Y+  F EAL+ EA  DKD+V +HA M
Sbjct: 363 ASNIDQK---KTQGMQQEGSTSSCSFLSTDHCRTYSDCFVEALLMEAVRDKDIVVVHAGM 419

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
           G    L+L+  RFP + FDVG+AEQHAVTFAAGL+  GLKPFC I S+F+QRAYDQVVHD
Sbjct: 420 GLEPSLHLYQERFPDKFFDVGMAEQHAVTFAAGLSRGGLKPFCIIPSTFLQRAYDQVVHD 479

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           VD Q +PVRF +  AGLVG+DGP   G+FD+TFM+CLPNM+VMAPS E EL  MVATAA 
Sbjct: 480 VDRQMIPVRFVVTGAGLVGSDGPLQSGAFDITFMSCLPNMIVMAPSSEEELARMVATAAQ 539

Query: 547 IDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           IDD+P CFRYPRG  +G E   P    GIPL++G+G++LIEG+ VALLGYG  VQ+CL A
Sbjct: 540 IDDQPICFRYPRGAVVGTECYFP---SGIPLQIGEGKLLIEGKDVALLGYGAMVQNCLKA 596

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
             LL   G+ +TVADARFCKPLD  L+R L ++H++LITVEEGSIGGFGSHV QFLA DG
Sbjct: 597 QILLSKLGVDVTVADARFCKPLDIELLRKLCENHDILITVEEGSIGGFGSHVAQFLALDG 656

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           LLDG +KWRP+VLPD+YI+   P +QL  AGLT  HIAAT   +LG+ REAL++M
Sbjct: 657 LLDGRLKWRPIVLPDKYIEQALPGEQLEDAGLTGHHIAATALTLLGRNREALQLM 711


>gi|365886052|ref|ZP_09425024.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3809]
 gi|365338480|emb|CCD97555.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3809]
          Length = 641

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/638 (59%), Positives = 480/638 (75%), Gaps = 13/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + + +   +   A++V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYSPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH VAKFD ATG Q K+     +Y   F ++L+ EAE D  +V I AAM  GTG++
Sbjct: 296 AADKYHAVAKFDIATGTQAKAKPNAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG K FCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKAFCAIYSTFLQRGYDQIVHDVCIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+PL +GKGR++ +G+++ALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGVPLPIGKGRMIRQGKQIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             ++ADARF KPLD  L+  LA+ HE+LIT+EEGSIGGFGSHV+QFLA  G+LDG +K R
Sbjct: 534 SASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQFLADQGMLDGGLKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +VLPD + DH +P    A+AGL    I   VF +LG+
Sbjct: 594 SMVLPDEFQDHDTPTAMYARAGLDAKGIVRKVFEVLGK 631


>gi|383773560|ref|YP_005452626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
 gi|381361684|dbj|BAL78514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
          Length = 642

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/643 (59%), Positives = 482/643 (74%), Gaps = 14/643 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L++ +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIRTPDDLRKLNVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLAGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE AK + +++   +   A +V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLREAAKQINQRLPKVIANRANRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYGPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYH V KFD ATG Q KS     +Y   F ++L+ EAE D  +VAI AAM  GTG++
Sbjct: 296 SADKYHAVVKFDVATGTQAKSKPNAPAYQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFNKAFPDRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA +DEAEL HMVAT  AI+DRPS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAINDRPSS 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G+E+P  + G+PLE+GKGR++ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 476 LRYPRGEGRGIEMP--DVGVPLEIGKGRVIRQGNKIALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             T+ADARF KPLD  L+  LA+ H+VLIT+EEGS+GGFGSHV Q+L   G LD G V++
Sbjct: 534 STTIADARFMKPLDTELVLKLARDHDVLITIEEGSVGGFGSHVAQYLTDQGALDTGMVRF 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           R +VLPD + DH +PA    +AGL    I A VF  LG+  +A
Sbjct: 594 RSMVLPDVFQDHDTPAAMYGRAGLDAKGIVAKVFEALGKDVKA 636


>gi|374293689|ref|YP_005040712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum lipoferum 4B]
 gi|357427092|emb|CBS90030.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum lipoferum 4B]
          Length = 637

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/637 (61%), Positives = 474/637 (74%), Gaps = 13/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD    P  ++ L   +L+Q ADELR + +  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDLCPTPAKLRALKPEQLRQFADELRTETVDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG GHSSTSI
Sbjct: 66  DTPYDRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV   +KG + NV+AVIGDG+M+AG AYEAMNNA    S +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVASRIKGEQRNVIAVIGDGSMSAGMAYEAMNNAASTKSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S++P   LR +AK +  Q+  P+   A + +EYARGM+
Sbjct: 185 --------PPVGAMSAYLSRLISSKPYLSLRHLAKEIADQLPRPLRNAARRAEEYARGMV 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG YYIGP+DGHN+D L+ +L+ V++     PVLIHVVT+KG+GY  AE+
Sbjct: 237 TGG--TLFEELGFYYIGPIDGHNLDHLLPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEE 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADK H VAKFD  TG Q K  +   +YT  FA++LIAEA  D  +V I AAM  GTGL+
Sbjct: 295 SADKLHAVAKFDVVTGTQSKPKSNAPTYTRVFAQSLIAEAAADPSIVGITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF  RFP RCFDVGIAEQHAVTFAAG+A EG KPFCAIYS+F+QRAYDQV+HDV LQ LP
Sbjct: 355 LFGERFPDRCFDVGIAEQHAVTFAAGMATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLP++V+MA +DE EL HMVAT AAIDDR S 
Sbjct: 415 VRFALDRAGLVGADGATHAGSFDTAYLGCLPDIVLMAAADELELMHMVATQAAIDDRASA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+ELP  ++G  L +GKGRIL EG ++A+L YGT +     A+A L + GL
Sbjct: 475 LRYPRGEGVGLELP--DRGSILPIGKGRILQEGTKIAILSYGTRLGEGRRAAAELAARGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             T+ADARF KPLD  L+R LA  HEVLIT+EEGS+GGFGS V+QFLA  GLLDG +K R
Sbjct: 533 STTLADARFAKPLDEDLVRRLALEHEVLITIEEGSVGGFGSFVLQFLATAGLLDGGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           P+VLPD Y+DH SPA Q   AGLT  HI  T    LG
Sbjct: 593 PMVLPDLYLDHDSPAKQYEAAGLTAQHIVRTALQALG 629


>gi|86751558|ref|YP_488054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           HaA2]
 gi|118595612|sp|Q2IRL7.1|DXS_RHOP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86574586|gb|ABD09143.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           HaA2]
          Length = 638

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/642 (59%), Positives = 475/642 (73%), Gaps = 13/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 4   TPLLDTIRTPDDLRKLRIDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 64  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  NNV+AVIGDG+++AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 124 SAGLGMAVARDLAGGTNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE  K + K +   + + AA+ +EY+RG +
Sbjct: 183 --------PPVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFM 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G G TLFEELG YY+GP+DGHN+D L+ IL+ V++ +T GP LIHVVT+KG+GY  AE 
Sbjct: 235 MGGG-TLFEELGFYYVGPIDGHNLDHLLPILQNVRDAET-GPFLIHVVTQKGKGYAPAEA 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A+DKYH V KFD ATG Q K+ +   SY   F ++L+ EA  D  VV I AAM  GTG++
Sbjct: 293 ASDKYHAVVKFDIATGTQAKAKSNAPSYQNVFGQSLVKEAAKDDKVVGITAAMPSGTGID 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 353 IFEKAFPDRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPN V+MA SDEAEL HMVAT  AI+DRPS 
Sbjct: 413 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P  + G+PLE+GKGR++ +G +VALL +GT +  C  A+  L + GL
Sbjct: 473 VRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA  HE+LIT+EEGSIGGFGSHV+Q L+  G LDG VK R
Sbjct: 531 STTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            +VLPD ++DH +PA   A AGL    I   VF  LG+   A
Sbjct: 591 AMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632


>gi|242094640|ref|XP_002437810.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
 gi|241916033|gb|EER89177.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
          Length = 722

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/671 (57%), Positives = 487/671 (72%), Gaps = 21/671 (3%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           A+L +  ++  ++ PTP+LDTI+ PIH+KNLS +ELKQLADE+R+++ F +S+     G 
Sbjct: 62  AALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVRSEIAFIMSRKCQPCGP 121

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
              V+ELT+A+HYVFNAP D+ILWD G   Y HKILTGRR + HT++Q +GLSGFT R E
Sbjct: 122 GRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSQFHTIKQKNGLSGFTSRFE 181

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYD FG GH   S+SAGLGMAV RD+ GRKN +V VI +    AGQ YEAM +AG+LDS
Sbjct: 182 SEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDS 241

Query: 239 DMIVILNDNKQVSLPTATLDG-PIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 297
           +M+VILND+    LP A  DG P   V A SSALS++QS++  R  RE AKG+ K  G  
Sbjct: 242 NMVVILNDSCHTLLPKA--DGRPKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFGKG 299

Query: 298 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 357
           MHE AAKVDEYARGMI   G+TLFEELGLYYIGP+DG N+DDL+ +L+EV +  +TGPVL
Sbjct: 300 MHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICVLKEVASLDSTGPVL 359

Query: 358 IHVVT---EKGRGYPYAEKAADKYHGVAKFDPATGK----QFKSSARTQSYTTYFAEALI 410
           +HV+T       G   +E  A +        P+       +F  +  +++Y   F EAL 
Sbjct: 360 VHVITGTESDTDGNIRSEITASEE------GPSNSSNDLLKFLETGLSRTYNDCFVEALT 413

Query: 411 AEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 470
           AEAE DK +V +H  MG    L LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC 
Sbjct: 414 AEAENDKRIVVVHGGMGMDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCI 473

Query: 471 IYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMA 530
           I S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+
Sbjct: 474 IPSTFLQRAYDQIVEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMS 533

Query: 531 PSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVGKGRILIEGER 588
           PS+E EL  MVATAA I+D+P CFRYPRG  +G    L  GN   PLE+GKG IL+EG+ 
Sbjct: 534 PSNEDELIDMVATAAMIEDKPICFRYPRGAIVGTSGTLTYGN---PLEIGKGEILVEGKE 590

Query: 589 VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS 648
           +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR+L + H  LITVEEG+
Sbjct: 591 IAFLGYGEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGT 650

Query: 649 IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNI 708
           +GGFGSHV QF++ DGLLDG +KWRP+VLPDRYI+H S A+QL  AGLT  HIAAT   +
Sbjct: 651 VGGFGSHVSQFISLDGLLDGRIKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTL 710

Query: 709 LGQTREALEIM 719
           LG+ R+AL +M
Sbjct: 711 LGRHRDALLLM 721


>gi|456356899|dbj|BAM91344.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agromonas oligotrophica
           S58]
          Length = 641

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/642 (59%), Positives = 482/642 (75%), Gaps = 13/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVARDLAGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LR+ AK + + +   +   A++V+EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 238 M-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYSPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH VAKFD ATG Q K+     +Y   F ++L+ EAE D  +V I AAM  GTG++
Sbjct: 296 AADKYHAVAKFDIATGTQAKAKPNAPAYQNVFGQSLVKEAEKDDKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFAKAFPKRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPNMV+MA SDEAEL HMVAT  AI+D+PS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDKPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+ L +GKGR++ +G++VALL +GT +  C  A+  L ++GL
Sbjct: 476 VRYPRGEGRGVEMP--EFGVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             ++ADARF KPLD  L+  LA+ H++LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R
Sbjct: 534 SASIADARFMKPLDEELVMKLAREHDILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            +VLPD + DH +PA   A+AGL    I   VF  LG+  +A
Sbjct: 594 SMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGKDYKA 635


>gi|148260827|ref|YP_001234954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
 gi|338979876|ref|ZP_08631214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
 gi|146402508|gb|ABQ31035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
 gi|338209213|gb|EGO96994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
          Length = 647

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/642 (60%), Positives = 478/642 (74%), Gaps = 15/642 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++N S  +L+QLA ELRA+ I  VS TGGHLG+SLGV+ELTVALH 
Sbjct: 3   PQTPLLDRVRVPSDLRNFSADQLRQLAGELRAETIDTVSVTGGHLGASLGVVELTVALHA 62

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF  P+DR++WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSST
Sbjct: 63  VFETPRDRLIWDVGHQTYPHKILTGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSST 122

Query: 192 SISAGLGMAVGRDLKGR--KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           SISAGLGMAV RDLK    K +V+AVIGDGAM+AG AYEAMNNAG   S MIVILNDN  
Sbjct: 123 SISAGLGMAVARDLKDESPKRHVIAVIGDGAMSAGMAYEAMNNAGASKSRMIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PPVGA+S+ LSRL S+R    +R+ A  + K+    +   A + +EYA
Sbjct: 182 MSI--------APPVGAMSAYLSRLISSRSFLSIRDFAARMAKRFPRTLERTAKRAEEYA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG+++G   TLFEELG YY+GP+DGHN+D L+ +L  +++     P+L+HVVT+KG+GY 
Sbjct: 234 RGILTGG--TLFEELGFYYVGPIDGHNLDHLLPVLRNLRDIDGDEPILLHVVTQKGKGYA 291

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE +ADKYHGV+KF+  TG+Q K+     SYT  FA+ALIAEAE + +VVA+ AAM  G
Sbjct: 292 PAEASADKYHGVSKFNVVTGEQTKAPPGPPSYTKVFAQALIAEAEHNPNVVAVTAAMPSG 351

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F +RFP RCFDVGIAEQHAVTFAAG+A EG+ PFCAIYS+F+QRAYDQVVHDV +
Sbjct: 352 TGLDAFAKRFPDRCFDVGIAEQHAVTFAAGMATEGMAPFCAIYSTFLQRAYDQVVHDVAI 411

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPVRFAMDRAGLVGADG TH G++D+ ++ CLP MV+MAPSDEAEL + VATAAAIDD
Sbjct: 412 QSLPVRFAMDRAGLVGADGATHAGAYDLAYLGCLPGMVIMAPSDEAELMNCVATAAAIDD 471

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPS FRYPRG G GV+LP   +G P E+GKGRI+ EG +VA+L  G  +   L A+  L 
Sbjct: 472 RPSAFRYPRGEGTGVQLP--ARGTPWEIGKGRIVREGSKVAVLALGPRLAEALKAADELA 529

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G   TVADARF KPLD AL+  LA+ HEVLIT+E+GS GGFG+ V   LA  G  D  
Sbjct: 530 ARGFPATVADARFMKPLDTALVDQLARHHEVLITIEDGSSGGFGAAVGHHLAWSGAFDSG 589

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +++RP+ LPDR+IDH SPA QL  AGLT   I A     LG+
Sbjct: 590 LRFRPMTLPDRFIDHNSPAGQLIDAGLTAKDIVAHALGALGR 631


>gi|115523090|ref|YP_780001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisA53]
 gi|122297370|sp|Q07SR3.1|DXS_RHOP5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115517037|gb|ABJ05021.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisA53]
          Length = 640

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/640 (60%), Positives = 476/640 (74%), Gaps = 13/640 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L I +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF
Sbjct: 7   TPLLDTIRTPDDLRKLRIDQVQQVADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES++D FG GHSSTSI
Sbjct: 67  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV  DL G KNNV+AVIGDG+++AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVASDLAGTKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE  K + K +   + + AA+ +EY+RG +
Sbjct: 186 --------PPVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFM 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G G TLFEELG YY+GP+DGHN+D L+ IL+ V++    GP LIHVVT+KG+GY  AE 
Sbjct: 238 MGGG-TLFEELGFYYVGPIDGHNLDHLLPILQNVRDADA-GPFLIHVVTQKGKGYAPAEA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH V KFD ATG Q K+ +   SY   F  +L+ EA+ D  +V I AAM  GTG++
Sbjct: 296 AADKYHAVVKFDIATGTQAKTKSNAPSYQNVFGASLVKEAQKDDKIVGITAAMPSGTGID 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 356 IFEKAFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  ++ CLPN V+MA SDEAEL HMVAT  AI+D PS 
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDAPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    GIPLE+GKGR++ +G ++ALL +GT +  C  A+  L + GL
Sbjct: 476 VRYPRGEGRGVEMP--EVGIPLEIGKGRVVRQGNKIALLSFGTRLAECEKAADELATLGL 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA+ HEVLITVEEGSIGGFGSHV+Q LA+ G+LDG V+ R
Sbjct: 534 STTVADARFMKPLDVELVLKLAREHEVLITVEEGSIGGFGSHVMQTLAEHGMLDGEVRMR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            LVLPD ++DH +PA   A+AGL    I   VF  LG+ +
Sbjct: 594 SLVLPDEFMDHDTPAVMYARAGLDAKGIVKKVFEALGKDK 633


>gi|323135714|ref|ZP_08070797.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
 gi|322398805|gb|EFY01324.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
          Length = 642

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/649 (60%), Positives = 479/649 (73%), Gaps = 17/649 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD IN P  ++ L   +LKQ ADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDRINTPDELRRLHPSQLKQFADELRRETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D+I+WDVGHQTYPHKI+TGRRD++ T+R   GLSGFTKR+ESEYD FG GHSSTSI
Sbjct: 66  DTPNDKIIWDVGHQTYPHKIITGRRDRIRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G  N+VVAVIGD +M+AG AYEA+NNAG LDS +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVARDLAGGNNHVVAVIGDSSMSAGMAYEALNNAGALDSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+S+ L+RL S    R +R+ AK +   +   +++ A K +E++R  I
Sbjct: 185 --------PPTGAMSAYLARLVSGGAYRSIRDAAKQLASHLPRFIYDKARKAEEFSRSFI 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T+FEELG YY+GP+DGHN+D L+ +L  V++ K  GPVL+HVVT+KG+GY  AE 
Sbjct: 237 TGG--TMFEELGFYYVGPIDGHNLDHLLPVLMNVRD-KDDGPVLVHVVTQKGKGYAPAEA 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYHGV KFD  TGKQFK  A   SYT  FA+AL+AEAE D  +VAI AAM  GTGL+
Sbjct: 294 ADDKYHGVVKFDVETGKQFKPKANAPSYTGVFAKALVAEAEHDDRIVAITAAMPSGTGLD 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDV IAEQHAVTFAAGLACEG KPFCA+YS+F+QR YDQVVHDV +Q LP
Sbjct: 354 IFGKHFPQRTFDVAIAEQHAVTFAAGLACEGYKPFCALYSTFLQRGYDQVVHDVAIQHLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADGPTH G+FD+ ++ CLP MVVMAPSDEAEL HMVATAAA D+ P  
Sbjct: 414 VRFAIDRAGLVGADGPTHAGAFDIAYLGCLPGMVVMAPSDEAELMHMVATAAAYDEGPIA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+GVELP   +G  LE+GKGR+L EG +VAL+  GT +   + A+  LE+ G+
Sbjct: 474 FRYPRGEGVGVELP--ERGDVLEIGKGRVLREGTKVALVALGTRLAEAMKAAEELENYGV 531

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD---GTV 670
             TVADARF KP+D  L+R LA +HEV+IT+EEGSIGGFGS V Q L+ DGLLD   G  
Sbjct: 532 STTVADARFAKPIDRDLLRRLAANHEVVITLEEGSIGGFGSQVFQALSDDGLLDGARGAF 591

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           K+R + LPD YIDH      +A+A L    I A    +LG  + A  +M
Sbjct: 592 KFRSMTLPDAYIDHDKHEIMIARAMLDSKAIVAKALELLGDEKGAARVM 640


>gi|294851814|ref|ZP_06792487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
 gi|294820403|gb|EFG37402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
          Length = 643

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/639 (63%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GLNLF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLNLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|118589273|ref|ZP_01546679.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stappia aggregata IAM
           12614]
 gi|118437973|gb|EAV44608.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia aggregata IAM
           12614]
          Length = 639

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/642 (61%), Positives = 473/642 (73%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + +P TPLLD +  P  ++ L   +LKQLADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TSKPDTPLLDQVKSPADLRQLDESDLKQLADELRAETIDAVSITGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P D+++WDVGHQ YPHKILT RRD++ T+RQ DGLSGFTKR+ES +D FG  H
Sbjct: 62  LHYVFNTPDDKLIWDVGHQCYPHKILTERRDRIRTLRQGDGLSGFTKRAESPFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA GRDLKG  NNV+AVIGDGAM+AG AYEAMNNAG+L S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAAGRDLKGGSNNVIAVIGDGAMSAGMAYEAMNNAGHLGSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L++L S    +  R+ AK + K +  P+ E AA+ +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLAKLVSGPTYQTFRDAAKNLVKNLPKPVFEKAARAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG  +G   TLFEELG YY+GPVDGHN++ L+ +L+ V++T   GP+LIH VT+KG+GY
Sbjct: 233 ARGFWTGG--TLFEELGFYYVGPVDGHNLEHLLPVLKNVRDTHH-GPILIHAVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGVAKFD  TGKQ K  A   SYT  FA +LI EAE D  V+AI AAM  
Sbjct: 290 APAEGAKDKYHGVAKFDVVTGKQAKPKANAPSYTNVFATSLIKEAETDDRVLAITAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+LF   +P R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDLFGEAYPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAGLVGADGPTH G+FD  F+ CLP  VVMA SDE EL HMVATA A D
Sbjct: 410 IQGLPVRFPIDRAGLVGADGPTHAGAFDTAFLTCLPGFVVMAASDEVELRHMVATAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG G+G+++P   +G  LE+GKG I  EG +VALL +G  +  CL A+  L
Sbjct: 470 EGPISFRYPRGEGVGLDMP--ERGSVLEIGKGVIRREGTKVALLNFGGRMSECLKAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLD  +IR LA+ HEVL+ +EEGS GGFGSHV+  LA++GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDMDMIRRLAREHEVLVMIEEGSAGGFGSHVLTRLAEEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +K R L LPD Y+DH  P    A+AGL    I  TVF  LG
Sbjct: 588 GLKVRALALPDAYLDHDKPDAMYARAGLNSDGILKTVFTALG 629


>gi|326404221|ref|YP_004284303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
           AIU301]
 gi|325051083|dbj|BAJ81421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
           AIU301]
          Length = 647

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/642 (60%), Positives = 478/642 (74%), Gaps = 15/642 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++N S  +L+QLA ELRA+ I  VS TGGHLG+SLGV+ELTVALH 
Sbjct: 3   PQTPLLDRVRVPSDLRNFSADQLRQLAGELRAETIDTVSVTGGHLGASLGVVELTVALHA 62

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF  P+DR++WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSST
Sbjct: 63  VFETPRDRLIWDVGHQTYPHKILTGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSST 122

Query: 192 SISAGLGMAVGRDLKGR--KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           SISAGLGMAV RDLK    K +V+AVIGDGAM+AG AYEAMNNAG   S MIVILNDN  
Sbjct: 123 SISAGLGMAVARDLKDESPKRHVIAVIGDGAMSAGMAYEAMNNAGASKSRMIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PPVGA+S+ LSRL S+R    +R+ A  + K+    +   A + +EYA
Sbjct: 182 MSI--------APPVGAMSAYLSRLISSRSFLSIRDFAARMAKRFPRTLERTAKRAEEYA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG+++G   TLFEELG YY+GP+DGHN+D L+ +L  +++     P+L+HVVT+KG+GY 
Sbjct: 234 RGILTGG--TLFEELGFYYVGPIDGHNLDHLLPVLRNLRDIDGDEPILLHVVTQKGKGYA 291

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE +ADKYHGV+KF+  TG+Q K+     SYT  FA+ALIAEAE + +VVA+ AAM  G
Sbjct: 292 PAEASADKYHGVSKFNVVTGEQTKAPPGPPSYTKVFAQALIAEAEHNPNVVAVTAAMPSG 351

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F +RFP RCFDVGIAEQHAVTFAAG+A EG+ PFCAIYS+F+QRAYDQVVHDV +
Sbjct: 352 TGLDAFGKRFPDRCFDVGIAEQHAVTFAAGMATEGMAPFCAIYSTFLQRAYDQVVHDVAI 411

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPVRFAMDRAGLVGADG TH G++D+ ++ CLP MV+MAPSDEAEL + VATAAAIDD
Sbjct: 412 QSLPVRFAMDRAGLVGADGATHAGAYDLAYLGCLPGMVIMAPSDEAELMNCVATAAAIDD 471

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPS FRYPRG G GV+LP   +G P E+GKGRI+ EG +VA+L  G  +   L A+  L 
Sbjct: 472 RPSAFRYPRGEGTGVQLP--ARGTPWEIGKGRIVREGSKVAVLALGPRLAEALKAADELA 529

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G   TVADARF KPLD AL+  LA+ HEVLIT+E+GS GGFG+ V   LA  G  D  
Sbjct: 530 ARGFPATVADARFMKPLDTALVDQLARHHEVLITIEDGSSGGFGAAVGHHLAWSGAFDSG 589

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +++RP+ LPDR+IDH SPA QL  AGLT   I A     LG+
Sbjct: 590 LRFRPMTLPDRFIDHNSPAGQLIDAGLTAKDIVAHALGALGR 631


>gi|148560626|ref|YP_001258456.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
 gi|166198603|sp|A5VP09.1|DXS_BRUO2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148371883|gb|ABQ61862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
          Length = 643

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD +  P  ++ L  R+L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKVPTPDRLRALPERDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TV DARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|296444536|ref|ZP_06886500.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
           OB3b]
 gi|296257804|gb|EFH04867.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
           OB3b]
          Length = 643

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/649 (60%), Positives = 482/649 (74%), Gaps = 16/649 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I+ P  ++ L   +L Q+ADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDRIDTPQDLRKLHPSQLPQIADELRRETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQTYPHKILTGRRD++ ++RQ  GLSGF+KR+ESEYD FG GHSSTSI
Sbjct: 66  DTPNDRIIWDVGHQTYPHKILTGRRDRIRSLRQGGGLSGFSKRAESEYDAFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMA+GRDL G  N+VVAVIGD A++AG AYEAMNNAG LDS +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAIGRDLSGGNNHVVAVIGDSALSAGMAYEAMNNAGALDSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+S+ L+RL S    R LRE AK + + +   +++ A K +E++R  I
Sbjct: 185 --------PPTGAMSAYLARLVSGGAYRTLRETAKQLARHLPHFLYDKARKAEEFSRSFI 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G G T+FEELG YY+GP+DGHN++ L+ +L  V++ K  GPVL+HVVT+KG+GY  AE 
Sbjct: 237 TGGG-TMFEELGFYYVGPIDGHNLEHLLPVLTNVRD-KDDGPVLVHVVTQKGKGYGPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AAD+YHGV +FD  TG Q K  A   SYT+ FA++L+AEAE D  +VAI AAM GGTGL+
Sbjct: 295 AADRYHGVNRFDVLTGAQDKPKANAPSYTSVFAKSLVAEAERDDKIVAITAAMPGGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + FP R FDV IAEQHAVTFAAGLACEG KPFCA+YS+F+QRAYDQVVHDV +Q LP
Sbjct: 355 LFEKAFPDRTFDVAIAEQHAVTFAAGLACEGYKPFCALYSTFLQRAYDQVVHDVAIQHLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADGPTH G+FDV ++ C+P MV+MA +DEAEL HMVATA   D+ P  
Sbjct: 415 VRFAIDRAGLVGADGPTHAGAFDVAYLGCIPGMVIMAAADEAELVHMVATAVQYDEGPIA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+G++LP   +G PLE+G+GRIL EG +VALL  GT +   L A+  L + G+
Sbjct: 475 FRYPRGEGVGLDLP--QRGEPLEIGRGRILREGSQVALLSLGTRLAEALTAAQELTARGV 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT---V 670
            +TVADARF KP+D  L+R LA  HEVLIT+EEGSIGGFG+   QFL+++G LDGT    
Sbjct: 533 SVTVADARFAKPIDRDLLRRLAAEHEVLITIEEGSIGGFGAQAFQFLSEEGALDGTRGAF 592

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           K+R ++LPD YIDH      LA+A L    I A     LG  R A   M
Sbjct: 593 KFRSMILPDIYIDHDKQDIMLAKASLDARAIVAKALETLGDERGAARAM 641


>gi|306845065|ref|ZP_07477645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
 gi|306274480|gb|EFM56275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
          Length = 643

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|265997614|ref|ZP_06110171.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
 gi|262552082|gb|EEZ08072.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
          Length = 646

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|296533687|ref|ZP_06896241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
           49957]
 gi|296265986|gb|EFH12057.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
           49957]
          Length = 650

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/646 (58%), Positives = 481/646 (74%), Gaps = 19/646 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++N S  +LKQLA ELRA+ +  VS+TGGHLG+SLGV+ELTVA+H 
Sbjct: 7   PATPLLDRVRIPADLRNFSADQLKQLAAELRAETVHAVSQTGGHLGASLGVVELTVAIHA 66

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P+DR++WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSST
Sbjct: 67  VFDTPRDRLIWDVGHQTYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSST 126

Query: 192 SISAGLGMAVGRDLKGR-------KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SISAGLGMAV RDLK           NV+AVIGDGAM+AG AYEAMNNAG + S +IV+L
Sbjct: 127 SISAGLGMAVARDLKRAMPGEPRDDRNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVVL 186

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN  +S+         PPVGA+S+ LSRL S+RP   LRE+   + ++   P+   A +
Sbjct: 187 NDN-DMSI--------APPVGAMSAYLSRLISSRPFLSLREMMAKLARRFPAPLERAARR 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            DEYARG+++G   TLFEELG YY+GP+DGH++D L+ +L  +++ +   PVL+HVVT+K
Sbjct: 238 ADEYARGLLTGG--TLFEELGFYYVGPIDGHSLDHLLPVLRNLRDAEDGAPVLLHVVTQK 295

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE +ADKYH VAKF+  TG Q K+     +YT  F++ALIAEAE D  +VA+ A
Sbjct: 296 GKGYAPAEASADKYHAVAKFNVVTGTQAKAPPGPPTYTKVFSQALIAEAEADPRIVAVTA 355

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+ F +RFP R +DVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QRAYDQV+
Sbjct: 356 AMPSGTGLDAFQKRFPKRTYDVGIAEQHAVTFAAGLATEGIKPFVAIYSTFLQRAYDQVM 415

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ LPVRFA+DRAGLVGADG TH G++D+ ++ CLP MV+MAPSDE EL HMVAT+
Sbjct: 416 HDVALQNLPVRFALDRAGLVGADGATHAGAYDIAYLGCLPQMVLMAPSDEVELAHMVATS 475

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D+ P  FR+PRG G G++  P  +G  +E+G+GR+L EG +VALL YG  +Q CL A
Sbjct: 476 AAYDEGPIAFRFPRGEGFGLQPVPA-RGEVMEIGRGRVLREGTKVALLSYGARLQECLKA 534

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + GL  TVADARF KPLD AL+  LA+ HEV++T+EEGS+GGFG+ V+  LA  G
Sbjct: 535 AEELAARGLSCTVADARFAKPLDTALVERLAREHEVMVTIEEGSVGGFGALVMHHLALRG 594

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             D  +++RP+ LPDRYIDH  P  Q A+AGL  + I ATV   LG
Sbjct: 595 AFDHGLRFRPMALPDRYIDHDKPERQYAEAGLDAAAIVATVGAALG 640


>gi|260754213|ref|ZP_05866561.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
           870]
 gi|260757433|ref|ZP_05869781.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
           292]
 gi|260883238|ref|ZP_05894852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297247834|ref|ZP_06931552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
           str. B3196]
 gi|260667751|gb|EEX54691.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
           292]
 gi|260674321|gb|EEX61142.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
           870]
 gi|260872766|gb|EEX79835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297175003|gb|EFH34350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
           str. B3196]
          Length = 643

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 477/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L+LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|225626944|ref|ZP_03784983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
 gi|256368891|ref|YP_003106397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
 gi|261218447|ref|ZP_05932728.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
 gi|261221652|ref|ZP_05935933.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
 gi|261320703|ref|ZP_05959900.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
 gi|261751780|ref|ZP_05995489.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
 gi|261757668|ref|ZP_06001377.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
 gi|265983591|ref|ZP_06096326.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
 gi|306839868|ref|ZP_07472666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
 gi|306842279|ref|ZP_07474941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
 gi|225618601|gb|EEH15644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
 gi|255999049|gb|ACU47448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
 gi|260920236|gb|EEX86889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
 gi|260923536|gb|EEX90104.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
 gi|261293393|gb|EEX96889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
 gi|261737652|gb|EEY25648.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
 gi|261741533|gb|EEY29459.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
 gi|264662183|gb|EEZ32444.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
 gi|306287587|gb|EFM59038.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
 gi|306405054|gb|EFM61335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
          Length = 643

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|23501337|ref|NP_697464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|161618408|ref|YP_001592295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
 gi|261754435|ref|ZP_05998144.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
           686]
 gi|376274806|ref|YP_005115245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
 gi|376280126|ref|YP_005154132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
 gi|384224120|ref|YP_005615284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|30315829|sp|Q8G292.1|DXS_BRUSU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|189027768|sp|A9M8W0.1|DXS_BRUC2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|23347228|gb|AAN29379.1| deoxyxylulose-5-phosphate synthase [Brucella suis 1330]
 gi|161335219|gb|ABX61524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
 gi|261744188|gb|EEY32114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
           686]
 gi|343382300|gb|AEM17792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|358257725|gb|AEU05460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
 gi|363403373|gb|AEW13668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
          Length = 643

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANVPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|338739777|ref|YP_004676739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
 gi|337760340|emb|CCB66171.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Hyphomicrobium sp. MC1]
          Length = 635

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/638 (61%), Positives = 471/638 (73%), Gaps = 14/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ LS  +L QLA ELR ++I  VS TGGHLG+ LGVIELTVALH+VF
Sbjct: 4   TPLLDKIATPHELRQLSEDQLPQLAAELRDEMIDAVSVTGGHLGAGLGVIELTVALHWVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GL+GFT R ES YD FG GHSSTSI
Sbjct: 64  NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQPGGLAGFTNREESVYDPFGAGHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV RDL G+ NNVVAVIGDGAM+AG AYEA+NNAG  +  +IV+LNDN  +S+ 
Sbjct: 124 SAALGMAVARDLTGKSNNVVAVIGDGAMSAGMAYEAINNAGARNERLIVVLNDN-DMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALS+ L+R+ S+     LR+ AK + K +       AA+V+EY R + 
Sbjct: 183 --------PPTGALSAYLARVTSSGTYVHLRDYAKQLAKMLPKAWERRAARVEEYTRHLW 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G     FEELG YY+GP+DGHN + L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE 
Sbjct: 235 QGG--AWFEELGFYYVGPIDGHNFEQLLPVLKNVRDLEQ-GPILVHVVTQKGKGYAPAEA 291

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           + DKYHGV KF+  TG Q K      SYT  FA++LIAEA  DK VVAI AAM  GTGL+
Sbjct: 292 SPDKYHGVNKFNVVTGAQDKPKPNAPSYTKVFADSLIAEARKDKRVVAITAAMPSGTGLD 351

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV +QKLP
Sbjct: 352 YFGKEFPDRTFDVGIAEQHAVTFAAGLAAEGYKPFTAIYSTFLQRAYDQVVHDVAIQKLP 411

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDV ++ACLP+ V+MA +DEAEL HMVAT A IDDRPS 
Sbjct: 412 VRFAIDRAGLVGADGATHAGSFDVAYLACLPDFVIMAAADEAELVHMVATQAQIDDRPSA 471

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GVELP   +GIPLE+GKGRI+ +G +VALL  GT +  CL A+  L S GL
Sbjct: 472 LRYPRGEGVGVELPA--EGIPLEIGKGRIVRQGSKVALLSLGTRLAECLKAADQLASFGL 529

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD ALIR LA +HEVL+TVEEGSIGGFGSHV+QFL+ +GLLD  ++ R
Sbjct: 530 STTVADARFAKPLDEALIRDLATNHEVLVTVEEGSIGGFGSHVLQFLSNEGLLDRGLRVR 589

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           P VLPD +IDHG P      A L  S I  TVF  LG+
Sbjct: 590 PKVLPDVFIDHGKPEAMYEAARLNASGIVETVFAALGR 627


>gi|407775204|ref|ZP_11122499.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
           profundimaris WP0211]
 gi|407281629|gb|EKF07190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
           profundimaris WP0211]
          Length = 639

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/646 (59%), Positives = 472/646 (73%), Gaps = 14/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S    TPLLDTIN P  ++ L   ++KQ+ADELRA+VI  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   STTSKTPLLDTINTPEELRKLQPAQMKQVADELRAEVIDAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HY+F+ P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG GH
Sbjct: 62  IHYLFDTPYDRLIWDVGHQCYPHKILTGRRDRIRTIRQGGGLSGFTKRSESEYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKG-RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           SSTSISAGLGMAV   L   ++ NV+AVIGDG+M+AG AYEAMNNA   D  +IVILNDN
Sbjct: 122 SSTSISAGLGMAVANQLSDDKRKNVIAVIGDGSMSAGMAYEAMNNAAATDQRLIVILNDN 181

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
             +S+         PPVG++S  LSRL S +  + LR  AKG+TK +   + E A K++E
Sbjct: 182 -DMSIA--------PPVGSMSGYLSRLISGKGYQGLRNAAKGLTKHLPRQIEEAARKLEE 232

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           Y RGM++G   TLFEE+G +Y+GP+DGHN+D L+ +L+ V++    GP+LIH VT+KG+G
Sbjct: 233 YTRGMVTGG--TLFEEMGFFYVGPIDGHNMDHLLPVLKNVRDADVDGPILIHAVTQKGKG 290

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE AADKYHGVAKFD  TGKQ K +    SYT  + E L+  AE D+ V AI AAM 
Sbjct: 291 YGPAENAADKYHGVAKFDVVTGKQAKPTPNAPSYTKVYGETLVKLAEKDEKVTAITAAMP 350

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTG+N+F   FP R FDVGIAEQHAVTFAAG+ACEG KPFC +YS+F+QR YDQVVHDV
Sbjct: 351 SGTGVNIFADHFPDRAFDVGIAEQHAVTFAAGMACEGYKPFCTLYSTFLQRGYDQVVHDV 410

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +Q LPVRFAMDRAGLVGADG TH G++D+ ++ CLPN V+MA +DEAEL HM  TA AI
Sbjct: 411 AIQNLPVRFAMDRAGLVGADGATHAGAYDIAYLGCLPNFVLMAAADEAELVHMTTTAWAI 470

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DDRPS FRYPRG G+GVE+P   +G  LE+GKGRIL EG ++A+L YGT +   L A+  
Sbjct: 471 DDRPSAFRYPRGEGVGVEMPA--EGKVLEIGKGRILREGGKIAILSYGTRLAEALIAAED 528

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L + GL  TVADARF KPLDH LI  LA++HEVLIT+EEGSI GFG+ V+Q +A  GLLD
Sbjct: 529 LAARGLPATVADARFAKPLDHELIADLARNHEVLITIEEGSINGFGAMVLQHMAGHGLLD 588

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
             +K R + LPD  IDH  P  Q  +AGL    I  T    LG + 
Sbjct: 589 NGLKIRTMALPDALIDHDKPEIQYEKAGLDAKAIVKTALGALGMSE 634


>gi|260566959|ref|ZP_05837429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
           40]
 gi|260156477|gb|EEW91557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
           40]
          Length = 643

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 475/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  + L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQNLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANVPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|261213460|ref|ZP_05927741.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915067|gb|EEX81928.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 643

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAVSDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|307000604|gb|ADN22972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 722

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/663 (57%), Positives = 479/663 (72%), Gaps = 5/663 (0%)

Query: 59  ASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGS 118
           A+L +  ++  ++ PTP+LDTI+ PIH+KNLS +ELKQLADE+R+++ F +S+     G+
Sbjct: 62  AALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLADEVRSEIAFIMSRKCQPCGA 121

Query: 119 SLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSE 178
              V+ELT+A+HYVFNAP D+ILWD G   Y HKILTGRR   HT+ Q +GLSGFT R E
Sbjct: 122 DRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTITQKNGLSGFTSRFE 181

Query: 179 SEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS 238
           SEYD FG GH   S+SAGLGMAV RD+ GRKN +V VI +    AGQ YEAM +AG+LDS
Sbjct: 182 SEYDPFGAGHGCNSLSAGLGMAVCRDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDS 241

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           +M+VILND+    LP A   G    V A SSALS++QS++  R  RE AKG+ K  G  M
Sbjct: 242 NMVVILNDSCHTLLPKAD-GGAKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFGKGM 300

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HE AAKVDEYARGMI   G+TLFEELGLYYIGP+DG N+DDL+ +L+EV +  +TGPVL+
Sbjct: 301 HEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICVLKEVASLDSTGPVLV 360

Query: 359 HVV--TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           HV+  TE   G     +      G +   P   K F  +  +++Y   F EAL AEAE D
Sbjct: 361 HVITGTENDTGGIIGSEINAVEEGPSNSSPDLLK-FLGTGLSRTYNDCFVEALTAEAEND 419

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
           K +V +H  MG    L LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I S+F+
Sbjct: 420 KRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFL 479

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QRAYDQ++ DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+PS+E E
Sbjct: 480 QRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDE 539

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
           L  MVATAA I+DRP CFRYPRG  +G        G P E+GKG IL+EG+ +A LGYG 
Sbjct: 540 LIDMVATAAMIEDRPICFRYPRGAIVGTS-GSVTYGNPFEIGKGEILVEGKEIAFLGYGE 598

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 656
            VQ CL A +LL + G++ TVA+ARFCKPLD  LIR+L + H  LITVEEG++GGFGSHV
Sbjct: 599 VVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGFGSHV 658

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            QF++ DGLLDG  KWRP+VLPDRYI+H S A+QL  AGLT  HIAAT   +LG+ R+AL
Sbjct: 659 SQFISLDGLLDGRTKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRDAL 718

Query: 717 EIM 719
            +M
Sbjct: 719 LLM 721


>gi|17987781|ref|NP_540415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|225851972|ref|YP_002732205.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
           23457]
 gi|256264520|ref|ZP_05467052.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
           str. 63/9]
 gi|260563510|ref|ZP_05833996.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|384210822|ref|YP_005599904.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
 gi|384407921|ref|YP_005596542.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
 gi|384444538|ref|YP_005603257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
 gi|21263517|sp|Q8YFM2.1|DXS_BRUME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782063|sp|C0RHE3.1|DXS_BRUMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|17983505|gb|AAL52679.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|225640337|gb|ACO00251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
           23457]
 gi|260153526|gb|EEW88618.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|263094853|gb|EEZ18591.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
           str. 63/9]
 gi|326408468|gb|ADZ65533.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
 gi|326538185|gb|ADZ86400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
 gi|349742534|gb|AEQ08077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
          Length = 643

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/639 (62%), Positives = 475/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD   
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGF 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|75674831|ref|YP_317252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
           Nb-255]
 gi|118595594|sp|Q3SUZ1.1|DXS_NITWN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|74419701|gb|ABA03900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
           Nb-255]
          Length = 666

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/639 (59%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HY+F
Sbjct: 31  TPLLDTIRTPADLRKLKVEQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYIF 90

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSI
Sbjct: 91  DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 150

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+ 
Sbjct: 151 SASLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA 209

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LSRL S +  R LRE AK + K +   + + A +V+EY+RG +
Sbjct: 210 --------PPVGAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKMIADRAERVEEYSRGFM 261

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           + SG TLFEELG YY+GP+DGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GYP AE 
Sbjct: 262 TNSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEA 319

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYH V KFD +TG Q KS     SY   F  +L+ EAE D  +VAI AAM  GTG++
Sbjct: 320 AADKYHAVVKFDISTGAQSKSKPNAPSYQNVFGASLVKEAEKDDKIVAITAAMPSGTGVD 379

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q LP
Sbjct: 380 IFNNAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLP 439

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD  F+ CLPNMV+MA +DEAEL HMVAT  AI+DRPS 
Sbjct: 440 VRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADEAELVHMVATQVAINDRPSA 499

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE+P    G+PL +GKGRI+ +G ++ALL +GT +  C  A+  L ++GL
Sbjct: 500 VRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGL 557

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 672
             T+ADARF KPLD  L   LA+ H+VLIT+EEGSIGGFGSHV+Q L  +G LD G V+ 
Sbjct: 558 STTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSHVMQTLMDNGALDGGLVRV 617

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R ++LPD ++DH +P    A+AGL    I A VF  LG+
Sbjct: 618 RSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656


>gi|265994395|ref|ZP_06106952.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
           str. Ether]
 gi|262765508|gb|EEZ11297.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
           str. Ether]
          Length = 643

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA S+EAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASNEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|261317112|ref|ZP_05956309.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
 gi|265988149|ref|ZP_06100706.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
           M292/94/1]
 gi|340790077|ref|YP_004755541.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           B2/94]
 gi|261296335|gb|EEX99831.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
 gi|264660346|gb|EEZ30607.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
           M292/94/1]
 gi|340558535|gb|AEK53773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           B2/94]
          Length = 643

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV +FD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNEFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|90420127|ref|ZP_01228035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335461|gb|EAS49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 638

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/642 (60%), Positives = 479/642 (74%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +  TPLLD I+ P  ++ L   +L+Q+ADELR D+I  VSKTGGHLG+ LGV+ELTVA
Sbjct: 2   SSKSVTPLLDQISSPADLRTLKEGQLRQVADELRTDLIDAVSKTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H+VFN P DR++WDVGHQ YPHK+LTGRRD M T+RQ  GLSGF KR+ESEYD FG GH
Sbjct: 62  IHHVFNTPDDRLIWDVGHQAYPHKLLTGRRDGMRTVRQEGGLSGFAKRTESEYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDL G KNNV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S +  R LR+ AK +++ + G   E A + +EY
Sbjct: 181 DMSIA--------PPTGAMSAYLARLVSGKTYRSLRDQAKSISQHLPGFFREGARRTEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            RG  +G   T+FEELG YY+GP+DGH++D L+ +L+ V++ KT GP+L+HVVT+KG+GY
Sbjct: 233 TRGFFTGG--TMFEELGFYYVGPIDGHDLDHLLPVLKNVRDAKT-GPILVHVVTKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE +ADKYHGV+KFD  TG Q KS     SYT  FA++LI EA+ D  +VA++AAM  
Sbjct: 290 GPAENSADKYHGVSKFDVITGAQAKSKGNAPSYTGVFADSLIQEAQDDDRIVAVNAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R FDVGIAEQHAVTF AGLA +G KPF AIYS+F+QRAYDQ+VHDV 
Sbjct: 350 GTGLDKFAEIFPKRTFDVGIAEQHAVTFCAGLASDGYKPFAAIYSTFLQRAYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +QKLPVRFA+DRAG VGADGPTH GSFD  F+  LP MVVMA +DEAEL HMV TAA  D
Sbjct: 410 IQKLPVRFAIDRAGYVGADGPTHAGSFDTGFLCPLPGMVVMAAADEAELRHMVRTAAVYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRGNG GV++P   +G  LE+GKGRI+ EG +VA+L +GT +   +AA+  L
Sbjct: 470 EGPISFRYPRGNGTGVDMP--ERGQALEIGKGRIVREGTKVAILSFGTRLADSVAAAEEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVADARF KPLD  LI  LA++HEVLITVEEG+ GGF S V++ LA  GLLD 
Sbjct: 528 ETFGLSTTVADARFAKPLDTELIGRLARNHEVLITVEEGASGGFASQVLEHLAARGLLDH 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +K RPL++PDR++DH +P   + QA L    I  TVF  LG
Sbjct: 588 GLKIRPLIMPDRFLDHAAPETMIRQAALDRQGIVDTVFRALG 629


>gi|265990565|ref|ZP_06103122.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263001349|gb|EEZ13924.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 643

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/639 (62%), Positives = 475/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  +  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHNDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD   
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGF 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|338973399|ref|ZP_08628763.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|414170518|ref|ZP_11426072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
 gi|338233442|gb|EGP08568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|410884296|gb|EKS32124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
          Length = 640

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/643 (60%), Positives = 473/643 (73%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S    TPLLD    P  ++ L   +L+Q ADELR + I  VS TGGH G+ LGV+ELT A
Sbjct: 2   SHSSKTPLLDAAPTPDLLRKLKPEQLRQFADELRLETIDTVSVTGGHFGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DRI+WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ESEYD FG  H
Sbjct: 62  LHYVFNTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDL G+KNNV+AVIGDG+M+AG AYEAMNNAG + S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLTGKKNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L+RL S++     RE  K +  ++     + A + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLARLLSSQTYGSAREALKNLAHKLPKFFEDRALRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G   TLFEELG +Y+GP+DGHN+D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGMVTGG--TLFEELGFFYVGPIDGHNLDHLLPVLTNVRDAGN-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE +ADKYH VAKFD ATG Q K+ +   SYT  F ++LI EA+ D  +VAI AAM G
Sbjct: 290 APAEASADKYHAVAKFDVATGAQAKAKSNAPSYTAVFGQSLIKEAQKDDKIVAITAAMPG 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++LF + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV 
Sbjct: 350 GTGVDLFEKVFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVG DGPTH GSFD  ++ CLP  V+MA +DEA+L HMVAT  A+D
Sbjct: 410 IQRLPVRFAIDRAGLVGQDGPTHAGSFDNAYLGCLPGFVIMAAADEADLVHMVATQVALD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D PS  RYPRG G GVE+P    G+ L +GKGRI+ EG +VALL +G  +  CL A+  L
Sbjct: 470 DAPSALRYPRGEGRGVEMP--EVGVALPIGKGRIMREGSKVALLSFGARLGECLKAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E++GL  TVADARF KPLD  +I  LA+ HEVLIT+EEGSIGGFG+HV+Q LA  G+LD 
Sbjct: 528 ETHGLSATVADARFMKPLDLDMILKLAREHEVLITIEEGSIGGFGTHVLQTLADHGVLDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            ++ R +VLPD +IDH SPA   AQAGL    I A VF  LG+
Sbjct: 588 GLRVRNMVLPDTFIDHDSPAAMYAQAGLDAKGIVAKVFEALGK 630


>gi|261324565|ref|ZP_05963762.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
 gi|261300545|gb|EEY04042.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
          Length = 643

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/639 (62%), Positives = 475/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I   VF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRAVFAAL 627


>gi|62289421|ref|YP_221214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. 9-941]
 gi|189023672|ref|YP_001934440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
 gi|260545827|ref|ZP_05821568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
           8038]
 gi|260761258|ref|ZP_05873601.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|376273822|ref|YP_005152400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus A13334]
 gi|423167409|ref|ZP_17154112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI435a]
 gi|423170215|ref|ZP_17156890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI474]
 gi|423173705|ref|ZP_17160376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI486]
 gi|423177010|ref|ZP_17163656.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI488]
 gi|423179648|ref|ZP_17166289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI010]
 gi|423182778|ref|ZP_17169415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI016]
 gi|423186279|ref|ZP_17172893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI021]
 gi|423189417|ref|ZP_17176027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI259]
 gi|75497245|sp|Q57ET1.1|DXS_BRUAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813263|sp|B2S9T6.1|DXS_BRUA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|62195553|gb|AAX73853.1| Dxs, deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. 9-941]
 gi|189019244|gb|ACD71966.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
 gi|260097234|gb|EEW81109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
           8038]
 gi|260671690|gb|EEX58511.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|363401428|gb|AEW18398.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus A13334]
 gi|374540843|gb|EHR12342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI435a]
 gi|374541451|gb|EHR12946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI486]
 gi|374542451|gb|EHR13940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI474]
 gi|374551167|gb|EHR22602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI010]
 gi|374551624|gb|EHR23058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI016]
 gi|374552760|gb|EHR24183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI488]
 gi|374557336|gb|EHR28733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI259]
 gi|374557958|gb|EHR29352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI021]
          Length = 643

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/639 (62%), Positives = 476/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L+LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|398829536|ref|ZP_10587733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
 gi|398216463|gb|EJN03009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
          Length = 639

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/643 (61%), Positives = 474/643 (73%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +++P TPLLD +N P  ++ L   +L QLA ELR ++I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   NKKPETPLLDRVNIPSELRALPESDLPQLAQELRTELIDAVSTTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF+ P DRI+WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFTKRSES+YD FG  H
Sbjct: 62  LHHVFDTPHDRIIWDVGHQAYPHKILTGRRERIRTLRQEGGLSGFTKRSESDYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  DL G K NVV+VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVASDLAGIKRNVVSVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S +  R  RE AK + K++   + E A + +EY
Sbjct: 181 DMSIA--------PPTGAMSAYLARLVSGKAYRSFRETAKQLAKKLPKFLQEKARRSEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           AR   +G   T+FEELG YY+GP+DGHN+D L+ +L+ V++T   GPVLIHVVT+KG+GY
Sbjct: 233 ARAFWTGG--TMFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-MDGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE +ADKYHGV KFD  TG Q K  A   SYT  FA +LI EA  D  +VA+ AAM G
Sbjct: 290 APAEASADKYHGVNKFDVITGAQAKPPANAPSYTKIFATSLIEEARHDDRIVAVTAAMPG 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+LF   FP R FDVGIAEQHAVTFAAGLA EGLKPF AIYS+F+QR YDQVVHDV 
Sbjct: 350 GTGLDLFGEVFPDRTFDVGIAEQHAVTFAAGLASEGLKPFAAIYSTFLQRGYDQVVHDVS 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADG TH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D
Sbjct: 410 LQNLPVRFPIDRAGLVGADGATHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG+GIG+ELP   +G  LE+GKGR + EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGDGIGIELP--ERGSILEIGKGRTVREGSKVALLSFGTRLAECLTAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            ++GL  TVADARF KPLD  LIR LA+ HEVL+TVEEG+IGGF SHV+ FL++DGLLD 
Sbjct: 528 SASGLSTTVADARFAKPLDEDLIRRLAREHEVLVTVEEGAIGGFASHVLHFLSRDGLLDH 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            ++ R LVLPD Y+DH  P    A+AGL  + I   VF  LG+
Sbjct: 588 GLRVRTLVLPDIYLDHAKPEVLYARAGLDSAGIVQAVFGALGR 630


>gi|378825151|ref|YP_005187883.1| hypothetical protein SFHH103_00558 [Sinorhizobium fredii HH103]
 gi|365178203|emb|CCE95058.1| dxs [Sinorhizobium fredii HH103]
          Length = 871

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/667 (58%), Positives = 489/667 (73%), Gaps = 15/667 (2%)

Query: 45  NHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRAD 104
           NHQ Q  +RP G   + S      +  P TPLLD ++ P  +K +  R+L QLA ELRA+
Sbjct: 210 NHQ-QSARRPFGAHEARSVTQLPTNPMPATPLLDKVDVPDDLKRIDDRDLPQLASELRAE 268

Query: 105 VIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTM 164
           +I  VS+TGGHLG+ LGV+ELT+A+H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+
Sbjct: 269 MIDAVSRTGGHLGAGLGVVELTIAIHKVFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTL 328

Query: 165 RQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAG 224
           RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  DL G+  NV+AVIGDGA++AG
Sbjct: 329 RQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADLDGKSRNVIAVIGDGALSAG 388

Query: 225 QAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELR 284
            AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R    +R
Sbjct: 389 MAYEALNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLASGRTYMGIR 439

Query: 285 EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL 344
           EV K +T  +G  +     +  E+ARG +  +G TLFEE+G Y+IGP+DGH+ D L+ +L
Sbjct: 440 EVGKKLTAYLGKTVDRAITRAVEHARGYV--TGGTLFEEMGFYHIGPIDGHSFDHLLPVL 497

Query: 345 EEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTY 404
             V++ +  GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +YT+ 
Sbjct: 498 RNVRDNR-RGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAYTSV 556

Query: 405 FAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 464
           FA+AL+ EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGLA EG
Sbjct: 557 FADALVQEASLDDKIVAITAAMPSGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGLAAEG 616

Query: 465 LKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLP 524
            KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++A LP
Sbjct: 617 YKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLASLP 676

Query: 525 NMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI 584
             VVMA +DEAEL HMV TAAA DD P  FRYPRG G+GVELP   +G  L +GKGRI+ 
Sbjct: 677 GFVVMAAADEAELKHMVRTAAAYDDGPISFRYPRGEGVGVELP--ERGEILPIGKGRIVK 734

Query: 585 EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITV 644
           +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEVL+T+
Sbjct: 735 QGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHELIRQLARHHEVLVTI 794

Query: 645 EEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 704
           EEG+IGGF SHV+ FLA++GLLDG +K RP+VLPD +++   P    A AGL  + I +T
Sbjct: 795 EEGAIGGFASHVLHFLAEEGLLDGGLKVRPMVLPDIWMEQAKPESMYAAAGLDRAGIVST 854

Query: 705 VFNILGQ 711
           VF  LGQ
Sbjct: 855 VFKALGQ 861


>gi|427429236|ref|ZP_18919272.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
           AK4]
 gi|425880916|gb|EKV29610.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
           AK4]
          Length = 639

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/646 (59%), Positives = 475/646 (73%), Gaps = 13/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +QR  TPLLDT+  P  M+ LS+ +L QLADE+RAD+I  VS+ GGHLG+ LGV+ELTVA
Sbjct: 2   TQRLETPLLDTVKSPEDMRKLSVDQLAQLADEVRADLIDAVSRVGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VFN P DR++WDVGHQ YPHKI+TGRRD + T+RQ  G+SGFT RSESEYD FG GH
Sbjct: 62  LHHVFNTPTDRLIWDVGHQCYPHKIVTGRRDGLRTVRQPGGISGFTLRSESEYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGM V  DL G   +V+ VIGDGAM+AG AYEAMNNAG +D+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMKVACDLAGDDRHVICVIGDGAMSAGMAYEAMNNAGAMDAKLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         P VGA+S+ LS++ S++P    R++AK +  +  GP++  A + +EY
Sbjct: 181 DMSIA--------PAVGAMSAYLSKVLSSKPWLSARQLAKEMAARFPGPINRAAKRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G   TLFEE+G YY+GP+DGH +D LV +L+ V+++   GPVLIH +T+KGRGY
Sbjct: 233 ARGMVTGG--TLFEEMGFYYVGPIDGHKMDHLVPVLKNVRDSDPQGPVLIHCITQKGRGY 290

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV+KFD  TG Q K+     SYT+ FA+AL+ EA  D  VVA+ AAM G
Sbjct: 291 APAEAAADKYHGVSKFDVVTGTQAKAKPNAPSYTSVFAKALVEEAREDDKVVAVTAAMPG 350

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F + FP R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QR YDQVVHDV 
Sbjct: 351 GTGLDKFGKEFPERTFDVGIAEQHAVTFAAGLASEGYKPFAAIYSTFLQRGYDQVVHDVA 410

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAG VGADG TH GSFD+ ++ CLPNM  + P+DEAEL H VATA A D
Sbjct: 411 IQNLPVRFAIDRAGFVGADGATHQGSFDLCYLCCLPNMTFLCPADEAELVHAVATAVAHD 470

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+G +LP   KG  LE+GKGR+L EG  VA+L  GT + +   A+  L
Sbjct: 471 SGPFAFRYPRGEGVGTQLP--EKGEVLEIGKGRVLREGSTVAILSLGTRLTAAQKAAEDL 528

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KP+D  L+R LA  HEVLITVEEG+ GGFG+HV+ FLA++GLLD 
Sbjct: 529 AAKGLSCTVADARFAKPIDTDLVRRLAADHEVLITVEEGARGGFGAHVLHFLAEEGLLDA 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            +K R +  PDR+I+H  P  Q+A AGL P  IAAT    LG+  E
Sbjct: 589 GLKVRTMCFPDRFIEHEKPDTQIAMAGLRPEDIAATALKALGRGEE 634


>gi|92116388|ref|YP_576117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
           X14]
 gi|118595592|sp|Q1QQ40.1|DXS_NITHX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91799282|gb|ABE61657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
           X14]
          Length = 668

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/670 (57%), Positives = 484/670 (72%), Gaps = 27/670 (4%)

Query: 56  GVCASLSERGEYHSQRP-------------PTPLLDTINYPIHMKNLSIRELKQLADELR 102
           GVC + +   +  S+ P              TPLLDTI  P  ++ L + +L+Q+ADELR
Sbjct: 2   GVCCATAPASDRRSRHPDMQNWNVAVTDFSKTPLLDTIRTPADLRKLRVEQLRQVADELR 61

Query: 103 ADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMH 162
            + I  VS TGGH G+ LGV+ELT A+HY+F+ P+DR++WDVGHQ YPHKILTGRRD++ 
Sbjct: 62  KETIDAVSVTGGHFGAGLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIR 121

Query: 163 TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 222
           T+R   GLSGFTKR+ES+YD FG  HSSTSISA LGMAV RDL G KNNV+AVIGDGAM+
Sbjct: 122 TLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVIAVIGDGAMS 181

Query: 223 AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 282
           AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  R 
Sbjct: 182 AGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTYRS 232

Query: 283 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 342
           LRE AK + K +   + + A +V+EY+RG +  SG TLFEELG YY+GP+DGHN+D L+ 
Sbjct: 233 LREAAKQLGKHLPKMIADRAERVEEYSRGFMVNSG-TLFEELGFYYVGPIDGHNLDHLLP 291

Query: 343 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 402
           +L+ V++ +  GP+L+HVVT+KG+GY  AE AADKYH V KFD +TG Q KS     +Y 
Sbjct: 292 VLKNVRDMEN-GPILLHVVTQKGKGYGPAEAAADKYHAVVKFDVSTGAQSKSKPNAPAYQ 350

Query: 403 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 462
             F ++L+ EAE D  ++AI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGLA 
Sbjct: 351 NVFGQSLVKEAEKDDKIIAITAAMPSGTGVDIFNKAFPKRTFDVGIAEQHAVTFAAGLAT 410

Query: 463 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 522
           EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++ C
Sbjct: 411 EGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGC 470

Query: 523 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 582
           LPN V+MA SDEAEL HMVAT  AI+DRPS  RYPRG G GVE+P    G+PL +GKGRI
Sbjct: 471 LPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRI 528

Query: 583 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 642
           + +G +VALL  GT +  C  A+  L ++GL  T+ADARF KPLD  L+  LA+ H+VLI
Sbjct: 529 VRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLI 588

Query: 643 TVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
           T+EEGSIGGFGSHV+Q LA+ G LD G V+ R +VLPD ++DH +P    A  GL    I
Sbjct: 589 TIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGI 648

Query: 702 AATVFNILGQ 711
            A VF  LG+
Sbjct: 649 VAKVFEALGK 658


>gi|261315322|ref|ZP_05954519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           M163/99/10]
 gi|261304348|gb|EEY07845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           M163/99/10]
          Length = 643

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/639 (62%), Positives = 475/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV +FD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNEFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGF SHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|150395717|ref|YP_001326184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium medicae
           WSM419]
 gi|150027232|gb|ABR59349.1| deoxyxylulose-5-phosphate synthase [Sinorhizobium medicae WSM419]
          Length = 637

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/642 (59%), Positives = 480/642 (74%), Gaps = 14/642 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + YP  +K +  R+L QLA ELRA+++  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 2   PATPLLDKVRYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHK 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 62  IFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L G+  NV+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 122 SISAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 181 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 233 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYPPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTLEASLDDKIVAITAAMPSGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 350 LDRFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA DD P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDDGP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  LE+GKGR++ +G +VALL +GT +  CL A+  L++ 
Sbjct: 470 ISFRYPRGEGVGVELP--ERGEILEIGKGRVIKQGSKVALLSFGTRLADCLLAAEDLDAA 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA++GL+DG +K
Sbjct: 528 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 587

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            RP+++PD +++   P     +AGL  + I +TVF  LGQ R
Sbjct: 588 VRPMIMPDVWMEQAKPEAMYTRAGLDRAGIVSTVFKALGQKR 629


>gi|409400110|ref|ZP_11250273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
 gi|409130838|gb|EKN00576.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
          Length = 646

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/641 (61%), Positives = 481/641 (75%), Gaps = 15/641 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N P  ++N SI +LKQLADELRA+ I  VS TGGHLGSSLGV+ELTVA+H 
Sbjct: 6   PKTPLLDRVNVPADLRNFSIEQLKQLADELRAETIDTVSVTGGHLGSSLGVVELTVAIHA 65

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSST
Sbjct: 66  VFDTPRDRLIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSST 125

Query: 192 SISAGLGMAVGRDLKGRKN--NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           SISAGLGMAV RDLK   +  NV+AVIGDG+M+AG AYEAMNNAG + S +IV+LNDN  
Sbjct: 126 SISAGLGMAVARDLKKEADPRNVIAVIGDGSMSAGMAYEAMNNAGAMRSRLIVVLNDN-D 184

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PPVGA+S+ LS L S+R    LR+ A  + K+   P+   A K +EYA
Sbjct: 185 MSI--------APPVGAMSAYLSTLISSRSFMSLRDFAAKMAKRFPRPIERTARKAEEYA 236

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG+++G   TLFEELG YY+GP+DGHN++ L+ +L  +++++   PVL+H+VT+KG+GY 
Sbjct: 237 RGILTGG--TLFEELGFYYVGPIDGHNMEHLMPVLRNLRDSEANEPVLLHIVTQKGKGYA 294

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE AADKYHGV KF+  TG+Q K+     +YT+ FA+ALIAEAE D  VVA+ AAM  G
Sbjct: 295 PAEAAADKYHGVQKFNVVTGEQKKAPPGPPTYTSVFAKALIAEAEADPAVVAVTAAMSPG 354

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+A EGLKPFCAIYS+F+QR YDQ+VHDV L
Sbjct: 355 TGLDKFEAKFPDRMFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQLVHDVVL 414

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPVRFAMDRAGLVGADG TH G++D+ F+  +P MV+MAPSDEAEL H VATAAAIDD
Sbjct: 415 QSLPVRFAMDRAGLVGADGATHAGAYDLAFLGPMPRMVIMAPSDEAELMHAVATAAAIDD 474

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPS FRYPRG G+G+ELP   +G P E+GKGRIL EG +VA+L  GT +Q  L A+  L 
Sbjct: 475 RPSAFRYPRGEGLGIELP--ARGTPWEIGKGRILREGGKVAILVLGTRLQDALNAADQLA 532

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G   TVADARF KPLD  LI  LA+ HEVLIT+EEG+ GGFG+ V   LA  G  D  
Sbjct: 533 AKGFPATVADARFMKPLDTDLIDQLARHHEVLITIEEGAAGGFGAAVAHHLAWSGAFDKG 592

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +K+RP+ LPDR IDH SPA Q+ +AGLT   IA      LG
Sbjct: 593 LKFRPMTLPDRLIDHNSPAAQMIEAGLTAQDIATHALTALG 633


>gi|82699348|ref|YP_413922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis biovar
           Abortus 2308]
 gi|237814909|ref|ZP_04593907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
           A]
 gi|118595496|sp|Q2YMF0.1|DXS_BRUA2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82615449|emb|CAJ10418.1| Transketolase, N terminal:Transketolase, central
           region:Transketolase, C
           terminal:Deoxyxylulose-5-phosphate synthase [Brucella
           melitensis biovar Abortus 2308]
 gi|237789746|gb|EEP63956.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
           A]
          Length = 643

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/639 (62%), Positives = 475/639 (74%), Gaps = 14/639 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L  ++L QLA+ELR ++I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSS
Sbjct: 63  HVFNTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMAV  +L G K NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +
Sbjct: 123 TSISAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ L+RL S R  R +RE AK V +++   + + A K +EYAR
Sbjct: 182 SI--------APPTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYAR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
              +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++T+  GPVLIHVVT+KG+GY  
Sbjct: 234 AFFTGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KFD  TGKQ K  A   SYT  F  +LI EA  D  +VA+ AAM  GT
Sbjct: 291 AEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAGLVGADGPTH GSFD  F+A LP  VVMA SDEAEL HMV TAA  D+ 
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG+G+GV+LP   +G  LE+GKGRI+ EG +VALL +GT +Q CLAA+  L +
Sbjct: 471 PISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLDH LIR L + HEVL+ VEEG++GGF SHV+QFLA DGLLD  +
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           K R L+LPD Y DHG P    A+AGL  + I  TVF  L
Sbjct: 589 KVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627


>gi|374330008|ref|YP_005080192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
 gi|359342796|gb|AEV36170.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
          Length = 633

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/639 (60%), Positives = 474/639 (74%), Gaps = 14/639 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD I+ P  +K +    L+Q+A+ELR +++  VS TGGHLG+ LGV+ELTVALH+VF+ 
Sbjct: 3   LLDQIHNPSDLKKVPEDRLQQVAEELREEMVDAVSVTGGHLGAGLGVVELTVALHHVFDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKDR++WDVGHQ YPHKILT R+ ++ T+RQ  GLSGFTKRSESEYD FG GHSSTSISA
Sbjct: 63  PKDRLIWDVGHQCYPHKILTDRKQRIRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG L+S +IVILNDN  +S+   
Sbjct: 123 GLGMAVARDLAGGDNNVIAVIGDGAMSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGALS++L+RL S +     RE AK V   +  P+ E AA+ +E+AR   +G
Sbjct: 180 ------PPVGALSASLARLVSGKTYTGFREAAKQVASALPKPLQEKAAQAEEFARSFFTG 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEELG YY+GPVDGHN+D L+ +L+ V++ K  GP+L+HVVT+KG+GY  AE A+
Sbjct: 234 G--TLFEELGFYYVGPVDGHNLDHLLPVLKNVRDAKE-GPILVHVVTQKGKGYLPAENAS 290

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           +KYH VAKFD  TG+Q K      SYT  FA ALI EA  D+ +V I AAM  GTGL++F
Sbjct: 291 NKYHAVAKFDVVTGEQSKPKPNAPSYTRVFANALIEEANKDEKIVGITAAMPDGTGLDVF 350

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +  PTR FDVGIAEQHAVTFAAG+A EG KPFCAIYS+F+QR YDQVVHDV +QKLPVR
Sbjct: 351 EKVHPTRMFDVGIAEQHAVTFAAGMASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVR 410

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DRAGLVGADG TH GSFD  F++CLP MVVM+P DEAEL HMV+TAAA D+ P  FR
Sbjct: 411 FPIDRAGLVGADGATHAGSFDTAFLSCLPGMVVMSPGDEAELVHMVSTAAAYDEGPIAFR 470

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG GIG++LP    G PLE+GKGRI+ EG RVAL+  G  +Q  L A+  L++ GL  
Sbjct: 471 YPRGEGIGIDLP--EVGTPLEIGKGRIVKEGSRVALVSLGGRLQEALKAADTLDAAGLST 528

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KPLD  +I  LAK H+VLIT+EEGSIGGFGS V+QFL+ +GLLDG++K R +
Sbjct: 529 TVADARFAKPLDTDMIGRLAKEHDVLITIEEGSIGGFGSQVLQFLSDNGLLDGSLKVRSM 588

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           +LPD + DH  P      AGL  S I   VF  LG+  +
Sbjct: 589 ILPDAFQDHAKPEAMYKDAGLDASGIVHRVFETLGKAED 627


>gi|365855944|ref|ZP_09395974.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
           bacterium AT-5844]
 gi|363718654|gb|EHM01988.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
           bacterium AT-5844]
          Length = 642

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/636 (60%), Positives = 476/636 (74%), Gaps = 22/636 (3%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TP+LD +  P  +KN S  +LKQ+ADELRA+ I  VS+TGGHLG+SLGV+ELTVA+H 
Sbjct: 17  PATPMLDRVRLPADLKNFSADQLKQVADELRAETIHAVSQTGGHLGASLGVVELTVAIHA 76

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ PKD+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 77  VFDTPKDKLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTRRAESEYDPFGAAHSST 136

Query: 192 SISAGLGMAVGRDL--------KGRKN--NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           SISAGLGMAV RDL         G++N  NV+AVIGDGAM+AG AYEAMNNAG + S +I
Sbjct: 137 SISAGLGMAVARDLLRGTPYSQGGKRNDQNVIAVIGDGAMSAGMAYEAMNNAGAMRSRLI 196

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           V+LNDN  +S+         PPVGA+S+ LSRL S+RP   LREV   V ++   P+   
Sbjct: 197 VVLNDN-DMSI--------APPVGAMSAYLSRLISSRPFLSLREVMAKVARRFPAPLERA 247

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
           A + DE+ARGM++G   TLFEELG YY+GP+DGHN+D L+ +L  +++ +T  PVL+HVV
Sbjct: 248 ARRADEFARGMLTGG--TLFEELGFYYVGPIDGHNMDHLLPLLRNLRDAETGPPVLLHVV 305

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           T+KG+GY  AE A DKYH VAKF+  TG Q K+     +YT  FA ALIAEAE D+ +VA
Sbjct: 306 TQKGKGYAPAEAAPDKYHAVAKFNVVTGTQTKAPPGPPTYTKVFANALIAEAERDERIVA 365

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           + AAM  GTGL+LF +RFP R FDVGIAEQHAVTFAAG+A EG+KPF AIYS+F+QRAYD
Sbjct: 366 VTAAMPSGTGLDLFQKRFPRRTFDVGIAEQHAVTFAAGMATEGIKPFVAIYSTFLQRAYD 425

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           QVVHDV LQKLPVRFA+DRAGLVGADG TH G++D+ ++ C+P MV+MAP+DEAEL HMV
Sbjct: 426 QVVHDVALQKLPVRFALDRAGLVGADGATHAGAYDIAYLGCIPQMVLMAPADEAELAHMV 485

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
           ATAAA DD P   R+PRG G G+   P  +G P+E+G+GR+L EG  VALL YGT +Q C
Sbjct: 486 ATAAAFDDGPIALRFPRGEGFGLAEVPA-RGTPVEIGRGRVLREGTSVALLSYGTRLQEC 544

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA 661
           L A+  L ++GL  TVADARF KPLD  L+  LA+ HEVL+T+EEGS  GFG+ V+Q LA
Sbjct: 545 LQAAEELAAHGLSCTVADARFAKPLDTTLVERLAREHEVLVTIEEGSACGFGALVMQHLA 604

Query: 662 QDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 697
             G LD  +K RP+ LPD +IDH +P  Q    G++
Sbjct: 605 WAGALDHGLKLRPICLPDTFIDHDTPKAQYDNNGMS 640


>gi|254471675|ref|ZP_05085076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
 gi|211958877|gb|EEA94076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
          Length = 633

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/639 (60%), Positives = 474/639 (74%), Gaps = 14/639 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD I+ P  +K +    L+Q+A+ELR +++  VS TGGHLG+ LGV+ELTVALH+VF+ 
Sbjct: 3   LLDQIHNPSDLKKVPEDRLQQVAEELREEMVDAVSVTGGHLGAGLGVVELTVALHHVFDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKDR++WDVGHQ YPHKILT R+ ++ T+RQ  GLSGFTKRSESEYD FG GHSSTSISA
Sbjct: 63  PKDRLIWDVGHQCYPHKILTDRKQRIRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG L+S +IVILNDN  +S+   
Sbjct: 123 GLGMAVARDLAGGDNNVIAVIGDGAMSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGALS++L+RL S +     RE AK V   +  P+ E AA+ +E+AR   +G
Sbjct: 180 ------PPVGALSASLARLVSGKTYTGFREAAKQVASALPKPLQEKAAQAEEFARSFFTG 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEELG YY+GPVDGHN+D L+ +L+ V++ K  GP+L+HVVT+KG+GY  AE A+
Sbjct: 234 G--TLFEELGFYYVGPVDGHNLDHLLPVLKNVRDAKE-GPILVHVVTQKGKGYLPAENAS 290

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           +KYH VAKFD  TG+Q K      SYT  FA ALI EA  D+ +V I AAM  GTGL++F
Sbjct: 291 NKYHAVAKFDVVTGEQSKPKPNAPSYTRVFANALIEEANKDEKIVGITAAMPDGTGLDVF 350

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +  PTR FDVGIAEQHAVTFAAG+A EG KPFCAIYS+F+QR YDQVVHDV +QKLPVR
Sbjct: 351 EKVHPTRMFDVGIAEQHAVTFAAGMASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVR 410

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DRAGLVGADG TH GSFD  F++CLP MVVM+P DEAEL HMV+TAAA D+ P  FR
Sbjct: 411 FPIDRAGLVGADGATHAGSFDTAFLSCLPGMVVMSPGDEAELVHMVSTAAAYDEGPIAFR 470

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG GIG++LP    G PLE+GKGRI+ EG RVAL+  G  +Q  L A+  L++ GL  
Sbjct: 471 YPRGEGIGIDLP--EIGTPLEIGKGRIVKEGSRVALVSLGGRLQEALKAADTLDAAGLST 528

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KPLD  +I  LAK H+VLIT+EEGSIGGFGS V+QFL+ +GLLDG++K R +
Sbjct: 529 TVADARFAKPLDTDMIGRLAKEHDVLITIEEGSIGGFGSQVLQFLSDNGLLDGSLKVRSM 588

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           +LPD + DH  P      AGL  S I   VF  LG+  +
Sbjct: 589 ILPDAFQDHAKPEAMYKDAGLDASGIVHRVFETLGKAED 627


>gi|338740575|ref|YP_004677537.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
 gi|337761138|emb|CCB66971.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Hyphomicrobium sp. MC1]
          Length = 648

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/644 (61%), Positives = 477/644 (74%), Gaps = 15/644 (2%)

Query: 71  RP-PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           RP  TPLLD ++ P  +K LS  EL QLADELR ++I  VS+TGGHLG+ LGV+ELTVAL
Sbjct: 7   RPSKTPLLDQVDTPDDLKQLSESELPQLADELRTELIEAVSQTGGHLGAGLGVVELTVAL 66

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HY+F+ P+DR++WDV HQ+YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HS
Sbjct: 67  HYLFDTPRDRLIWDVSHQSYPHKILTGRRDRIRTLRQPGGLSGFTKRTESEYDPFGAAHS 126

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISAGLGMAV R++ G  NNVV VIGDGAM+AG AYEAMNNAG     +IVILNDN +
Sbjct: 127 STSISAGLGMAVAREMSGGTNNVVCVIGDGAMSAGMAYEAMNNAGARSERLIVILNDN-E 185

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GALSS L+R  S+     +R++AK + K++     E AA+V+EY 
Sbjct: 186 MSIA--------PPTGALSSYLARTTSSDSYLYVRDLAKQLAKRLPKSWGERAARVEEYT 237

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R +  G     FEELG YYIGP+DGH++  LV IL  V++ +  GP+L+HVVT+KG+GY 
Sbjct: 238 RSLWHGGA--WFEELGFYYIGPIDGHDLSQLVPILRNVRDAEQ-GPILVHVVTKKGKGYA 294

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE +ADKYHGV KF+  TG Q K+ A   SYT  FA++LI EA+ D  +VAI AAM  G
Sbjct: 295 PAEASADKYHGVTKFNVVTGVQTKAPASAPSYTRVFADSLIDEAKKDDKIVAITAAMPDG 354

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL++F R FP R FDVGIAEQHAVTFAAGLA EG+KPFCA+YS+F+QR YDQVVHDV L
Sbjct: 355 TGLDVFGRAFPDRTFDVGIAEQHAVTFAAGLATEGMKPFCALYSTFLQRGYDQVVHDVAL 414

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPVRFA+DRAG VGADG TH GSFD+ ++ CLPNMV+MAP+DE EL HMVATAAAIDD
Sbjct: 415 QSLPVRFAIDRAGFVGADGATHAGSFDLAYLGCLPNMVIMAPADECELKHMVATAAAIDD 474

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           RPS FRYPRG G GV LP    GIPLE+GKGRIL EG  +ALL  GT +Q  L A+  L 
Sbjct: 475 RPSAFRYPRGEGTGVALP--ETGIPLEIGKGRILREGSTIALLSLGTRLQETLKAADQLA 532

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  LIR LA++H+VLITVEEGSIGGFGSHV+ +LA++GLLD  
Sbjct: 533 ALGLSATVADARFMKPLDTDLIRRLAENHDVLITVEEGSIGGFGSHVLHYLAENGLLDRG 592

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           +K R  V+PD ++D   P     +AGL    I  TV + +   R
Sbjct: 593 LKVRSKVMPDEFVDQDKPEVMNQRAGLCAQGIVETVCDAIQLER 636


>gi|114706808|ref|ZP_01439708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
           HTCC2506]
 gi|114537756|gb|EAU40880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
           HTCC2506]
          Length = 635

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/638 (60%), Positives = 474/638 (74%), Gaps = 14/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I+ P  ++    ++L+Q+ADELR+D+I  VS+TGGHLG+ LGV+ELTVALHYVF
Sbjct: 3   TPLLDQIDTPADLRRFKEKDLRQIADELRSDLIDAVSQTGGHLGAGLGVVELTVALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDV HQ YPHKILT RR++M T+RQ  GLSGF KR+ESEYD FG GHSSTSI
Sbjct: 63  NTPDDRLIWDVSHQAYPHKILTQRRERMRTVRQEGGLSGFAKRTESEYDPFGAGHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G KNNVV+VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S+ 
Sbjct: 123 SAGLGMAVARDLAGAKNNVVSVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+S  L+RL S +  R LR  A+  T+++     E A K +EY RG  
Sbjct: 182 --------PPTGAMSHYLARLVSGKTYRTLRNRARDFTQRLPDFFREGARKTEEYTRGFF 233

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG YYIGP+DGH++D LV +L+ V++ +T GP+L+HVVT+KG+GY  AE 
Sbjct: 234 TGG--TLFEELGFYYIGPIDGHDLDALVPVLKNVRDAET-GPILVHVVTKKGKGYEPAES 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV+KFD  TG Q KS     SYT  FA +LI EA  D  +VA++AAM  GTGL+
Sbjct: 291 SADKYHGVSKFDVITGAQSKSKGNAPSYTNVFASSLIEEARHDDKIVAVNAAMPAGTGLD 350

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F   +PTR FDVGIAEQHAVTF AGLA EG KPF AIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 351 KFGEAYPTRTFDVGIAEQHAVTFCAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQHLP 410

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAG VGADG TH GSFD  ++  LP  VVMA SDEAEL HMV TAAA D+ P  
Sbjct: 411 VRFAIDRAGFVGADGATHAGSFDTAYLCPLPGFVVMASSDEAELRHMVRTAAAYDEGPIS 470

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRGNG GV++P   +G  LE+GKGR++ EG +VA+L +GT +   LAA+  L+  GL
Sbjct: 471 FRYPRGNGTGVDMP--ERGEVLEIGKGRLIKEGSKVAILAFGTRLTDSLAAAEELDGYGL 528

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  L+  LA++HEVLITVEEGS GGF + V+Q LA  GLLD  +K R
Sbjct: 529 STTVADARFAKPLDTDLVERLARNHEVLITVEEGSSGGFAAQVLQHLASVGLLDMGLKIR 588

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           P+V+PD ++DHG PA   A+AGL  + I +TVF  LG+
Sbjct: 589 PIVMPDAFVDHGVPAKMNAEAGLDKAGIVSTVFRALGR 626


>gi|420240106|ref|ZP_14744367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
 gi|398077668|gb|EJL68635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
          Length = 639

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/642 (59%), Positives = 476/642 (74%), Gaps = 14/642 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++ +  R+L QLA ELR ++I  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PATPLLDKVKLPADLREIEDRDLTQLARELRDEMIDAVSRTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 65  VFNTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  DL G K NV+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAADLSGSKRNVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R++ K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDLGKKLTAYLGKNVDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q KS     SYT+ F EAL+ EA +D+ +V + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKSKPNAPSYTSVFGEALVQEASLDEKIVGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           ++     FP R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV +Q 
Sbjct: 353 IDKLADVFPARTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVAIQG 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAGLVGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGLVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  LE+GKGR++ +G +VALL +GT ++ CL A+  L++ 
Sbjct: 473 ISFRYPRGEGVGVELP--ERGQILEIGKGRVVKQGAKVALLSFGTRLKECLLAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+ HEVLIT+EEG++GGFGSHV+QFLA +GLLD  +K
Sbjct: 531 GLSTTVADARFAKPLDQELIRQLARHHEVLITIEEGAVGGFGSHVLQFLATEGLLDNGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            R LVLPD ++   SP    A+AGL  + I +TVF  LGQT+
Sbjct: 591 IRSLVLPDIWMQQASPDAMYAKAGLDRAGIVSTVFKTLGQTQ 632


>gi|433612645|ref|YP_007189443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           GR4]
 gi|429550835|gb|AGA05844.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           GR4]
          Length = 645

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/640 (59%), Positives = 480/640 (75%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++YP  +K +  R+L QLA ELRA+++  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 10  PATPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHK 69

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 70  IFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 129

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L G+  NV+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 130 SISAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 188

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 189 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 240

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 241 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYPPA 297

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YTT FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTTVFADALTQEASLDDKIVAITAAMPSGTG 357

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  L +GKGRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 478 ISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAA 535

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA++GL+DG +K
Sbjct: 536 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 595

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+V+PD +++   P    A+AGL  + I +TVF  LGQ
Sbjct: 596 VRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635


>gi|227821074|ref|YP_002825044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii
           NGR234]
 gi|227340073|gb|ACP24291.1| 1-deoxy-D-xylulose 5-phosphate synthase [Sinorhizobium fredii
           NGR234]
          Length = 645

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/640 (60%), Positives = 477/640 (74%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N P  +K +  R+L QLA ELR+++I  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 10  PATPLLDKVNVPDDLKKIDDRDLPQLASELRSEMIDAVSRTGGHLGAGLGVVELTIAIHK 69

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 70  VFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSST 129

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  DL G+  NV+AVIGDGA++AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 130 SISAGLGMAVAADLDGKSRNVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDN-DMS 188

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 189 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 240

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GYP A
Sbjct: 241 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNRR-GPVLIHVVTQKGKGYPPA 297

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPHGTG 357

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 358 LDRFAAVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA DD P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLASLPGFVVMAAADEAELKHMVRTAAAYDDGP 477

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  LE+GKGRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 478 ISFRYPRGEGVGVELP--ERGEILEIGKGRIIKQGTKVALLSFGTRLADCLLAAEDLDAA 535

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG+IGGF SHV+ FLA++GLLDG +K
Sbjct: 536 GLSTTVADARFAKPLDHELIRQLARHHEVLITIEEGAIGGFASHVLHFLAEEGLLDGGLK 595

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+VLPD +++   P    A AGL    I +TVF  LGQ
Sbjct: 596 VRPMVLPDIWMEQAKPESMYAAAGLDRVGIVSTVFKALGQ 635


>gi|407719744|ref|YP_006839406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           Rm41]
 gi|407317976|emb|CCM66580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           Rm41]
          Length = 645

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/640 (59%), Positives = 480/640 (75%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++YP  +K +  R+L QLA ELRA+++  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 10  PATPLLDKVDYPDDLKKMDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHK 69

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 70  IFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 129

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L G+  NV+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 130 SISAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 188

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 189 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 240

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 241 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYPPA 297

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 357

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  L +GKGRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 478 ISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAA 535

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA++GL+DG +K
Sbjct: 536 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 595

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+V+PD +++   P    A+AGL  + I +TVF  LGQ
Sbjct: 596 VRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635


>gi|15964633|ref|NP_384986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           1021]
 gi|334315344|ref|YP_004547963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           AK83]
 gi|384528590|ref|YP_005712678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           BL225C]
 gi|21263533|sp|Q92RJ1.1|DXS_RHIME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|15073811|emb|CAC45452.1| Probable 1-deoxyxylulose-5-phosphate synthase [Sinorhizobium
           meliloti 1021]
 gi|333810766|gb|AEG03435.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           BL225C]
 gi|334094338|gb|AEG52349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           AK83]
          Length = 645

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/640 (59%), Positives = 480/640 (75%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++YP  +K +  R+L QLA ELRA+++  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 10  PATPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHK 69

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 70  IFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 129

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L G+  NV+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 130 SISAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 188

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 189 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 240

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 241 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYPPA 297

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 357

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  L +GKGRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 478 ISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAA 535

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA++GL+DG +K
Sbjct: 536 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 595

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+V+PD +++   P    A+AGL  + I +TVF  LGQ
Sbjct: 596 VRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635


>gi|312114711|ref|YP_004012307.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219840|gb|ADP71208.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 643

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/641 (59%), Positives = 474/641 (73%), Gaps = 15/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I +P  ++ L   +L+Q+ADELR ++I  VS TGGHLG+ LGV+ELTVA+HY+F
Sbjct: 7   TPLLDKIKFPQDLRQLEADQLQQVADELRTELIDAVSVTGGHLGAGLGVVELTVAIHYLF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG GHSSTSI
Sbjct: 67  DTPHDRVIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRK--NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SAGLGMAV  DLKG     NV+AVIGDG+M+AG AYEAMNNAG +D+ +I+ILNDN  +S
Sbjct: 127 SAGLGMAVASDLKGEDGGRNVIAVIGDGSMSAGMAYEAMNNAGAMDARLIIILNDN-DMS 185

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVGALS+ L+R+ S+    ++R++AK + +++       AA+ +E+ R 
Sbjct: 186 IA--------PPVGALSNYLARMHSSETFLKVRDIAKNMAQRLPKIWERRAARAEEFTRH 237

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           + +G   +LFEELG+YY+GP+DGH++D L+ +L  V+++   GPVLIH VT+KG+GY  A
Sbjct: 238 LFTGG--SLFEELGIYYVGPIDGHDLDILLPVLRNVRDSAHKGPVLIHCVTQKGKGYEPA 295

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EKA DKYHGV KF+  TG Q K  A   SYT  FA++L+ EA  D  +VAI AAM GGTG
Sbjct: 296 EKAPDKYHGVTKFNVITGAQDKVKASAPSYTKVFAQSLLDEARKDDTIVAISAAMPGGTG 355

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF   FP R FDVGIAEQHAVTFAAG+A EG+KPFCAIYS+F+QR YDQ++HDV +Q 
Sbjct: 356 LDLFESEFPERTFDVGIAEQHAVTFAAGMATEGMKPFCAIYSTFLQRGYDQLIHDVSVQH 415

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH G+FD+ F+ CLP+ VVMAPSDEAEL HMV T+ AI+DRP
Sbjct: 416 LPVRFALDRAGLVGADGATHAGTFDLAFLCCLPDFVVMAPSDEAELKHMVTTSVAINDRP 475

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S  RYPRG G GVE+P     +PL  GKGR++ EG  VA+L  GT +   L A+  L + 
Sbjct: 476 SAIRYPRGEGYGVEMPAQGSVLPL--GKGRVVREGSTVAILSLGTRLHESLKAADKLAAM 533

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+ HEVL+TVEEGS GGFGS V++FLA+DGLLD  +K
Sbjct: 534 GLSTTVADARFAKPLDLDLIRQLARHHEVLVTVEEGSCGGFGSQVLEFLARDGLLDHGLK 593

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
            RPL LPD YIDHG P      AGL  S I   V   LG +
Sbjct: 594 VRPLTLPDTYIDHGKPEAMYEAAGLNASGIVGAVVAALGTS 634


>gi|365899110|ref|ZP_09437031.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3843]
 gi|365420205|emb|CCE09573.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3843]
          Length = 618

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/625 (59%), Positives = 470/625 (75%), Gaps = 13/625 (2%)

Query: 91  IRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYP 150
           + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A+HYVF+ P+DR++WDVGHQ YP
Sbjct: 1   MEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYP 60

Query: 151 HKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN 210
           HKILTGRRD++ T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G  N
Sbjct: 61  HKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGTN 120

Query: 211 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 270
           NV+AVIGDGAM+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ 
Sbjct: 121 NVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAY 171

Query: 271 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 330
           LSRL S +  R LRE AK + + +   +   A++V+EY+RG +   G TLFEELG YY+G
Sbjct: 172 LSRLYSGKTYRTLREAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVG 230

Query: 331 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 390
           P+DGHN+D L+ +L+ V++ +T GP+L+HVVT+KG+GYP AE +ADKYH VAKFD ATG 
Sbjct: 231 PIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYPPAEASADKYHAVAKFDVATGT 289

Query: 391 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 450
           Q K+      Y   F ++L+ +AE D  ++ I AAM  GTG+++F + FP R FDVGIAE
Sbjct: 290 QAKAKPNAPQYQNVFGQSLVKQAEKDDKIIGITAAMPSGTGIDIFAKAFPKRTFDVGIAE 349

Query: 451 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 510
           QHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG T
Sbjct: 350 QHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGAT 409

Query: 511 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 570
           H GSFD  ++ CLPNMV+MA SDEAEL HMVAT   I+DRPS  RYPRG G GVE+P   
Sbjct: 410 HAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVVINDRPSAVRYPRGEGRGVEMP--E 467

Query: 571 KGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 630
            G+PLEVGKGR++ +G+++ALL +GT +  C  A+  L + GL  ++ADARF KPLD  L
Sbjct: 468 VGVPLEVGKGRMIRQGKQIALLSFGTRLAECEKAADELAAQGLSTSIADARFMKPLDEEL 527

Query: 631 IRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 690
           +  LA+ HE+LIT+EEGS+GGFGSHV+Q+LA  G+LDG +K R +VLPD ++DH +PA  
Sbjct: 528 VLKLARDHEILITIEEGSVGGFGSHVMQYLADQGMLDGGLKMRAMVLPDEFLDHDTPAAM 587

Query: 691 LAQAGLTPSHIAATVFNILGQTREA 715
             +AGL    I   VF  LG+  +A
Sbjct: 588 YGRAGLDAKGIVRKVFEALGKDYKA 612


>gi|449016065|dbj|BAM79467.1| 1-deoxyxylulose-5-phosphate synthase [Cyanidioschyzon merolae
           strain 10D]
          Length = 772

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/675 (56%), Positives = 490/675 (72%), Gaps = 29/675 (4%)

Query: 66  EYHSQRP-PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIE 124
           EY S  P  TPLLD + +P  M+  ++ E+KQLA ELR +++  VSKTGGHLG+SLGV+E
Sbjct: 72  EYTSAAPLSTPLLDAVRFPADMRQFTVGEVKQLAHELRWELLRAVSKTGGHLGASLGVVE 131

Query: 125 LTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCF 184
           LTVALHYVFN P+D I+WDV HQTYPHKILTGRR +MHT+R++ G+SGFT+R ESEYD F
Sbjct: 132 LTVALHYVFNTPEDAIVWDVSHQTYPHKILTGRRHRMHTLRKSGGISGFTRRVESEYDVF 191

Query: 185 GTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           G GHSSTSISA LG+A+GRDL G+K +V+AVIGDGA+T G AYEAMNNAGYL+S +IVIL
Sbjct: 192 GAGHSSTSISAALGLAIGRDLAGKKQHVIAVIGDGALTGGMAYEAMNNAGYLNSRIIVIL 251

Query: 245 NDNKQVSLPTATLDGP-IPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAA 303
           NDN QVSLPT T       P GALS  +SRL +++  +++R +AK  ++    P+   AA
Sbjct: 252 NDNGQVSLPTGTKSAAGTGPAGALSGYMSRLLTSKEFQDVRAIAKEFSRLFPDPLQRTAA 311

Query: 304 KVDEYARGMIS----GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ++DEYAR  ++    G+ +TLFEELG YY+GPVDGH+V+ LV +L+ +++     P+ +H
Sbjct: 312 QLDEYARAWVAQGAGGNRATLFEELGFYYVGPVDGHDVEVLVNVLKNIRDAPGNKPIFLH 371

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           V TEKGRGYP AE A DKYHGV+KFD ATGKQ        SYT+ FA+ALIAEA+ D+ +
Sbjct: 372 VKTEKGRGYPPAESALDKYHGVSKFDLATGKQMVPMHSPPSYTSVFAKALIAEADEDRRI 431

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           V I AAM GGTG+  F    PTRCFDVGIAEQHAVTFAAGL+ +G KPFC IYS+F+QR 
Sbjct: 432 VGITAAMPGGTGMGAFGEAHPTRCFDVGIAEQHAVTFAAGLSIQGFKPFCCIYSTFLQRG 491

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQV+HDV LQKLPVRF +DRAGLVG DGPTH G+FD+ ++ C+PNM++MAPSDE EL H
Sbjct: 492 YDQVIHDVALQKLPVRFILDRAGLVGNDGPTHHGTFDLAYLGCIPNMMIMAPSDEIELVH 551

Query: 540 MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE----------VGKGRILIEGER- 588
           MVATA A D+ P   RYPRG  +G+++   + G  LE          +GKGRI+ E +  
Sbjct: 552 MVATARAYDEGPCALRYPRGTAVGLDVLREHFGYDLEAIPVRGKVLPIGKGRIIREKKSA 611

Query: 589 -----------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 637
                      VA+L  GT +   + A+  LE+  +  TVADARF KPLD  LIR L ++
Sbjct: 612 STADGAEIPRGVAILSLGTRLLEAVHAAGQLEALDVACTVADARFMKPLDTDLIRRLIRN 671

Query: 638 HEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
           HEVLIT+EEGSIGGFG HV+ + A +GLLD G  K RP+V+PD +I+ G+ A+Q  +AGL
Sbjct: 672 HEVLITIEEGSIGGFGDHVLHYAALNGLLDEGKCKVRPMVIPDVFIETGTQAEQYEEAGL 731

Query: 697 TPSHIAATVFNILGQ 711
           T +HI  T   ++G+
Sbjct: 732 TAAHIVRTALQLVGK 746


>gi|384534992|ref|YP_005719077.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
           [Sinorhizobium meliloti SM11]
 gi|336031884|gb|AEH77816.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
           [Sinorhizobium meliloti SM11]
          Length = 658

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/640 (59%), Positives = 480/640 (75%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++YP  +K +  R+L QLA ELRA+++  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 23  PATPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHK 82

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 83  IFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 142

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L G+  NV+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 143 SISAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 201

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 202 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 253

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 254 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYPPA 310

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 311 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 370

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 371 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 430

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA D+ P
Sbjct: 431 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 490

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  L +GKGRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 491 ISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAA 548

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA++GL+DG +K
Sbjct: 549 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 608

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+V+PD +++   P    A+AGL  + I +TVF  LGQ
Sbjct: 609 VRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 648


>gi|83312003|ref|YP_422267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetospirillum
           magneticum AMB-1]
 gi|118595587|sp|Q2W367.1|DXS_MAGMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82946844|dbj|BAE51708.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 644

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/646 (61%), Positives = 481/646 (74%), Gaps = 12/646 (1%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           +P + LLD ++ P  +++ SI EL+QL  E+R ++I +VS TGGHLG+ LGV ELTVALH
Sbjct: 9   KPSSSLLDRVSSPADIRDFSIEELEQLTYEVRQEMIQSVSFTGGHLGAGLGVAELTVALH 68

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           ++F+ P+DR++WDVGHQ YPHKILTGRR +M TMRQ  GLSGFT+RSESEYD FG GHSS
Sbjct: 69  HIFDTPRDRLIWDVGHQAYPHKILTGRRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHSS 128

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV RDLKG  NNV+AVIGDGAM+AGQAYEAMNNAG   S +IVILNDN  +
Sbjct: 129 TSISAALGMAVARDLKGATNNVIAVIGDGAMSAGQAYEAMNNAGAAGSRLIVILNDN-DM 187

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGALS+ LSRL S+     LR + K +   +   +     + +EYAR
Sbjct: 188 SI--------APPVGALSAHLSRLLSSPSYHSLRHLVKDLAHLLPPSLERAVGRAEEYAR 239

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+SG G TLFEELG YY+GP+DGHN + L+ +L+ ++++  T PV++HVVT+KGRGYP 
Sbjct: 240 GMVSGGG-TLFEELGFYYVGPIDGHNFEHLLPVLKNLRDSDDTKPVMLHVVTKKGRGYPP 298

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV +FD  TG+  K  A   SYT+ FA+ALIAEAEVD  VVAI AAM GGT
Sbjct: 299 AEAAADKYHGVGRFDVLTGQLEKPKANAPSYTSVFAKALIAEAEVDDRVVAITAAMPGGT 358

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+ F  RFP R FDVGIAEQHAVTFA GLA EG KPFCAIYSSF+QRAYDQV HDV LQ
Sbjct: 359 GLDKFGDRFPARTFDVGIAEQHAVTFAGGLATEGFKPFCAIYSSFLQRAYDQVQHDVVLQ 418

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           KLPVRFA+DRAGLVGADG TH GS+D+ F+ CLP++V+M PSDEA+L H VATA +IDDR
Sbjct: 419 KLPVRFAIDRAGLVGADGATHAGSYDMAFLGCLPDIVIMCPSDEADLMHAVATAVSIDDR 478

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           PS FRYPRG G+G+EL    +G  + +GKGR++ EG RVA+L  GT +   L A+  L +
Sbjct: 479 PSAFRYPRGEGVGIEL--SERGSVMPIGKGRVVREGNRVAILSLGTRLAEALKAADELAA 536

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TV DARF KPLD  LI  LA+ HEVLITVEEGS+GGFGSHV+  LA  G LD  +
Sbjct: 537 RGLAPTVVDARFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDNGL 596

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           K RPL LPD +++H +PA Q  + GL  S I ATV   LG+ R  +
Sbjct: 597 KVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEARSVV 642


>gi|254501985|ref|ZP_05114136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
 gi|222438056|gb|EEE44735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
          Length = 631

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/635 (61%), Positives = 465/635 (73%), Gaps = 14/635 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +LD ++ P  ++ L   EL QLA+ELR + I  VS TGGHLG+ LGV+ELTVALHYVFN 
Sbjct: 1   MLDQVSSPAELRQLDEAELGQLAEELRTETIDTVSITGGHLGAGLGVVELTVALHYVFNT 60

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILT RRD++ T+RQ  GLSGFTKRSES YD FGT HSSTSISA
Sbjct: 61  PDDRIIWDVGHQSYPHKILTERRDRIRTLRQPGGLSGFTKRSESIYDPFGTAHSSTSISA 120

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMA  RDLK   NNV+AVIGDGAM+AG AYEAMNNAG+L S ++VILNDN  +S+   
Sbjct: 121 GLGMAAARDLKDGDNNVIAVIGDGAMSAGMAYEAMNNAGHLGSRLVVILNDN-DMSIA-- 177

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGA+S+ L++L S    + LR  AK + K     + E AA+ +EYARG  +G
Sbjct: 178 ------PPVGAMSAYLAKLVSGPTYQSLRGAAKSIVKNFPKQLAEKAARAEEYARGFWTG 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEELG YY+GPVDGHN++ L+ IL+ V++T   GPVLIH VT+KG+GY  AE A 
Sbjct: 232 G--TLFEELGFYYVGPVDGHNLEHLLPILKNVRDTHN-GPVLIHAVTQKGKGYAPAEGAK 288

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DKYHGVAKFD  TGKQ K  A   SYT  FA +LI EAE D+ VVAI AAM  GTGLNLF
Sbjct: 289 DKYHGVAKFDVVTGKQSKPKANAPSYTNVFATSLIREAEEDEKVVAITAAMPDGTGLNLF 348

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
              FP R +DVGIAEQHAVTFAAG+A EG KPF AIYS+F+QRAYDQV+HDV LQ LPVR
Sbjct: 349 GEAFPERTYDVGIAEQHAVTFAAGMATEGYKPFAAIYSTFLQRAYDQVIHDVALQGLPVR 408

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DRAGLVGADG TH G+FD  +++CLP  VVMA SDEAEL HMVATA A D+ P  FR
Sbjct: 409 FPIDRAGLVGADGATHAGAFDTAYLSCLPGFVVMAASDEAELRHMVATAVAYDEGPISFR 468

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+G+++P   +G  LE+GKG +  EG +VALL +G  +  CL A+  L++ GL  
Sbjct: 469 YPRGEGVGLDMP--ERGTVLEIGKGIVRREGTKVALLSFGGRMAECLKAADELDAAGLST 526

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KPLD  LIR LA+ HEVL+T+EEGS+GGFGSHV+  LAQ+G LD  +K R L
Sbjct: 527 TVADARFAKPLDMDLIRRLAREHEVLVTIEEGSVGGFGSHVLSALAQEGALDAGLKIRTL 586

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LPD Y DH  PA   A AGL    I  TVF  LG
Sbjct: 587 TLPDTYQDHDKPASMYASAGLDKEGILTTVFTALG 621


>gi|328544916|ref|YP_004305025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polymorphum gilvum
           SL003B-26A1]
 gi|326414658|gb|ADZ71721.1| 1-deoxy-D-xylulose 5-phosphate synthase [Polymorphum gilvum
           SL003B-26A1]
          Length = 639

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/642 (61%), Positives = 475/642 (73%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLD +  P +++ L+  +L QLADELR + I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   SSKPHTPLLDKVTSPANLRALAEADLAQLADELRKETIDAVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  H
Sbjct: 62  LHYVFNTPDDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAVGRDL GR NNV+AVIGDGAM+AG AYEAMNNAG + S +IV+LNDN 
Sbjct: 122 SSTSISAGLGMAVGRDLDGRANNVIAVIGDGAMSAGMAYEAMNNAGSMHSRLIVVLNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L++L S    + LR+ AK + + +  P+ E AAK +E+
Sbjct: 181 DMSI--------APPVGAMSAYLAKLVSGPTYQSLRDAAKSIARALPRPLQEKAAKAEEF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG  +G   TLFEELG YY+GPVDGHN++ L+ +L  V++T + GPVLIHVVT+KG+GY
Sbjct: 233 ARGFWTGG--TLFEELGFYYVGPVDGHNLEHLLPVLRNVRDTHS-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGVA+FD  TGKQ K  A   SYT+ FA +L+ EAE D  +VAI AAM  
Sbjct: 290 APAEGAKDKYHGVARFDVITGKQAKPKANAPSYTSVFARSLVQEAEQDDKIVAITAAMPE 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+LF   FP R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDLFQEAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAGLVGADGPTH G+FD  F+ACLP  VVMA SDEAEL HMVATAAA D
Sbjct: 410 IQGLPVRFPIDRAGLVGADGPTHAGAFDTAFLACLPGFVVMAASDEAELRHMVATAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P  FRYPRG G+GVELP   +G  L++GKG I  EG +VALL +G  +  C  A+  L
Sbjct: 470 DGPISFRYPRGEGMGVELP--ERGRVLDIGKGIIRREGTKVALLSFGARLGECFKAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLD  L+  LA+ HEVL+T+EEGS+GGFGSHV+  LA+ G LD 
Sbjct: 528 DAAGLSTTVADARFAKPLDTDLVLRLAREHEVLVTIEEGSVGGFGSHVLAALAEAGALDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            ++ R + LPD + D   P    AQAGL  + I   VF  LG
Sbjct: 588 GLRVRTMTLPDSFQDQDKPDALYAQAGLNATAILTRVFEALG 629


>gi|418404560|ref|ZP_12978014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           CCNWSX0020]
 gi|359501479|gb|EHK74087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           CCNWSX0020]
          Length = 658

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/640 (59%), Positives = 479/640 (74%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + YP  +K +  R+L QLA ELRA+++  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 23  PATPLLDKVEYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHK 82

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSST
Sbjct: 83  IFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSST 142

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L G+  NV+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 143 SISAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 201

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 202 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 253

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 254 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYPPA 310

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL  EA +D  +VAI AAM  GTG
Sbjct: 311 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 370

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 371 LDRFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 430

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA D+ P
Sbjct: 431 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 490

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  L +GKGRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 491 ISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAA 548

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEG++GGF SHV+QFLA++GL+DG +K
Sbjct: 549 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 608

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+V+PD +++   P    A+AGL  + I +TVF  LGQ
Sbjct: 609 VRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 648


>gi|452821339|gb|EME28371.1| 1-deoxy-D-xylulose-5-phosphate synthase [Galdieria sulphuraria]
          Length = 804

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/714 (55%), Positives = 495/714 (69%), Gaps = 68/714 (9%)

Query: 63  ERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGV 122
           E+ +  S    TPLLDTIN+P  +K LS++EL +L+ ELR +VI  VSKTGGHLG++LGV
Sbjct: 89  EQKDSRSSSSVTPLLDTINFPNELKKLSLQELLRLSHELRWEVIRIVSKTGGHLGAALGV 148

Query: 123 IELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYD 182
           IELT+A+HY FN P+DR++WDV HQ+YPHKILTGRR +M T+R+  GLSGFTKR+ESEYD
Sbjct: 149 IELTLAIHYAFNTPEDRLIWDVSHQSYPHKILTGRRSRMLTLRKYGGLSGFTKRAESEYD 208

Query: 183 CFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
            FG GHSSTSISA LGMA  RDL G++N+ +AVIGDG +T G AYEAMNN GYL+  +IV
Sbjct: 209 PFGAGHSSTSISAALGMATARDLSGKRNHCIAVIGDGGITGGMAYEAMNNCGYLNHRVIV 268

Query: 243 ILNDNKQVSLPTAT-LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           ILNDN QVSLPT T   G + P GALS   +RL S+ P   +R +AK +++     +   
Sbjct: 269 ILNDNNQVSLPTGTKTAGGVSPAGALSKYTNRLLSSSPFLNIRSLAKDLSRIFPHQVQGF 328

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
           AAK DEYAR + +G G TLFEELG YY+GPVDGH+++DL+ ILE V++     PVLIHV 
Sbjct: 329 AAKADEYARTLFTG-GGTLFEELGFYYVGPVDGHSLEDLIPILENVRDMHVNKPVLIHVK 387

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGK-----QFKSSARTQSYTTYFAEALIAEAEVD 416
           TEKGRGYP AEKA DKYHGV  FD  TGK       KSS+   +Y+T FA  LI EAE D
Sbjct: 388 TEKGRGYPPAEKALDKYHGVTSFDVETGKPLKKQDVKSSSAPLNYSTIFANTLIREAEED 447

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
           + +VAI AAM GGTGLNLF  +FP+RCFDVGIAEQHAVTFAAGLA EG KPFC IYS+F+
Sbjct: 448 RKIVAITAAMPGGTGLNLFGEKFPSRCFDVGIAEQHAVTFAAGLASEGYKPFCCIYSTFL 507

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QR YDQV+HDV LQ LPVRF +DRAG+VG DG TH GS+D+T++ C+PN+V+MA S+E E
Sbjct: 508 QRGYDQVIHDVALQSLPVRFMIDRAGMVGDDGSTHQGSYDLTYLGCIPNIVIMAASNEIE 567

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVE--------------LPPGNKGIPLEVGKGRI 582
           L +MV T+ +ID +PS  RYPRG G+G+E              LP   +G  L++GKGR+
Sbjct: 568 LMNMVVTSLSIDGKPSAVRYPRGVGVGIETLVTKLGYQLEDQKLP--ERGSVLKIGKGRL 625

Query: 583 LIEG--------------ER----------------------------VALLGYGTAVQS 600
           +  G              ER                            VALL  GT + S
Sbjct: 626 VRRGRFREGKNSTQEGLIERRLARQSNSGATDLYSAEKDNSSLYRKTHVALLSLGTRLVS 685

Query: 601 CLAASALLES--NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
           C+ A+  LES    L +TVADARF KPLD  LI  L K +E+LITVEE SIGGFGSHVVQ
Sbjct: 686 CVDAAVHLESLDEQLAVTVADARFMKPLDIELIDYLVKQNEILITVEENSIGGFGSHVVQ 745

Query: 659 FLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +L+Q+G LD G +K+R +V+PD++I+HGS  +Q  +AGL    IA TV  ++G+
Sbjct: 746 YLSQNGYLDTGNLKFRSMVIPDKFIEHGSQGEQYDEAGLQSHQIATTVLRLVGK 799


>gi|418055612|ref|ZP_12693666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353209890|gb|EHB75292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 635

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/638 (60%), Positives = 470/638 (73%), Gaps = 14/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ LS  +L Q+ADELRA++I  VS TGGHLG+ LGVIELTVALH+VF
Sbjct: 4   TPLLDRIGTPHELRQLSEDQLPQVADELRAEMIDAVSVTGGHLGAGLGVIELTVALHWVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR ES YD FG  HSSTSI
Sbjct: 64  NTPEDRLIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV RDL G KN+V+AVIGDGAM+AG AYEA+NNAG  D  +IVILNDN  +S+ 
Sbjct: 124 SAALGMAVARDLNGGKNSVIAVIGDGAMSAGMAYEALNNAGARDERLIVILNDN-DMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALS+ L+R+ S+     LR+ AK + K +       AA+V+EY R + 
Sbjct: 183 --------PPTGALSAYLARVTSSGTYLHLRDYAKQLAKMLPKQWERRAARVEEYTRHIW 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G   T FEELG YY+GP+DGH+ + L+ +L+ V++ +   P+L+HVVT+KG+GY  AE 
Sbjct: 235 QGG--TWFEELGFYYVGPIDGHDFNQLLPVLKNVRDAEQA-PILVHVVTKKGKGYAPAEA 291

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYHGV KF+  TG Q K      SYT  FA++LI EA  DK +VAI AAM  GTGL+
Sbjct: 292 ADDKYHGVNKFNVITGAQVKPKPNAPSYTKVFADSLIDEARKDKRIVAITAAMPSGTGLD 351

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA EG KPF AIYS+F+QRAYDQVVHDV +QKLP
Sbjct: 352 HFGKEFPDRTFDVGIAEQHAVTFAAGLAAEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLP 411

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ ++ CLP+ V+MA SDEAEL HMVAT   IDDRPS 
Sbjct: 412 VRFALDRAGLVGADGATHAGSFDIAYLGCLPDFVIMAASDEAELVHMVATQVQIDDRPSA 471

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG GIGV++P    G+PLE+GKGRI+ EG ++ALL  GT +  CL A+  L++ GL
Sbjct: 472 LRYPRGEGIGVDMP--EFGVPLEIGKGRIVREGSKIALLSLGTRLAECLKAADQLQTFGL 529

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  LIR LA +HEVL+TVEEGS+GGFGSHV+QFL+ +GLLD  ++ R
Sbjct: 530 STTVADARFAKPLDGRLIRDLALNHEVLVTVEEGSVGGFGSHVLQFLSNEGLLDRGLRVR 589

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
             VLPD +ID G P     +AGL  S I  TVF  LG+
Sbjct: 590 AKVLPDVFIDQGKPEAMYEEAGLNASGIVQTVFAALGR 627


>gi|163761048|ref|ZP_02168126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
           DFL-43]
 gi|162281829|gb|EDQ32122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
           DFL-43]
          Length = 643

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/644 (59%), Positives = 475/644 (73%), Gaps = 14/644 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+  P  +K +  ++L QLADELRA++I  VS TGGHLG+ LGV+ELTVA+H 
Sbjct: 5   PNTPLLDTVRSPSDLKQIDDKQLPQLADELRAEMIDAVSHTGGHLGAGLGVVELTVAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ +GLSGFTKRSESEYD FG GHSST
Sbjct: 65  VFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTKRSESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L+ +  +VV+VIGDGAM+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVASQLQNKPRHVVSVIGDGAMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+R+ S R     R+  K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARMASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEELG Y+IGP+DGHN+D L+ +L  V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TMFEELGFYHIGPIDGHNLDHLLPVLRNVRDNGD-GPVLIHVVTQKGKGYGPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV+KFD  TG Q K+     SYT  F E L+ E   D  +VAI AAM  GTG
Sbjct: 293 EAAADKYHGVSKFDVITGTQAKAKPNAPSYTAVFGETLVQEGGYDDKIVAISAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           ++ F + FP R FDVGIAEQHAVTFAAG+A EGLKPFCAIYS+F+QR YDQVVHDV +QK
Sbjct: 353 VDKFAKVFPERTFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRGYDQVVHDVAIQK 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADG TH GSFD T++ACLP  VVMA +DEAEL HMV TA A D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGATHAGSFDTTYLACLPGFVVMAAADEAELKHMVRTAVAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GV++P   +G  LE+GKGR++ EG +VAL+ +GT +  CL A+  L++ 
Sbjct: 473 LSFRYPRGEGVGVDMP--ERGQILEIGKGRVMREGSKVALISFGTRLAECLVAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HEVLIT+EEGS+GGFGSHV+QFLA +GLLDG +K
Sbjct: 531 GLSTTVADARFAKPLDHELIRQLARHHEVLITIEEGSVGGFGSHVLQFLATEGLLDGGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            R +VLPD ++DH SP    A+AGL    I  TVF  LG    A
Sbjct: 591 VRSMVLPDIFMDHASPDVMYARAGLDRKGIVDTVFRALGTENPA 634


>gi|422294553|gb|EKU21853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nannochloropsis gaditana
           CCMP526]
          Length = 842

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/662 (59%), Positives = 482/662 (72%), Gaps = 35/662 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD++ YP  MK   +++LKQLA ELR D + +VSKTGGHLGSSLGVIELTVALHYVFN
Sbjct: 120 PLLDSVRYPHDMKRFDLKDLKQLAHELRWDTLHHVSKTGGHLGSSLGVIELTVALHYVFN 179

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDV HQ YPHKILTGRRD+MH++RQT+GLSGF KRSESEYD FG GHSSTSIS
Sbjct: 180 TPDDRIVWDVSHQVYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSIS 239

Query: 195 AGLGMAVGRDLKGRK-NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           A LGM+VG+ L  ++ NN VAVIGDGA+T G A+EA+NNAGYL S M+VILNDN QVSLP
Sbjct: 240 AALGMSVGKLLTNKRVNNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLP 299

Query: 254 TATLD-GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           T T   G + P GALSS  SRL S++P ++ R  AKG+ + +   + ++ AK+DEYARG+
Sbjct: 300 TGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGL 359

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           I G   TLFEELG YYIGPVDGH++D+LV ILE ++++ +T PVL+HV TEKG GYP AE
Sbjct: 360 IQGG--TLFEELGFYYIGPVDGHDLDNLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAE 417

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQ--SYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
            A+DKYHGVAKFD +TG+QFK   +    S TT FA AL   A  D+ VV I AAM GGT
Sbjct: 418 VASDKYHGVAKFDVSTGRQFKGGNKGAPLSLTTTFANALCEIAAEDRTVVGITAAMPGGT 477

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+++F +RFP R FDVGIAEQHAVTFAAG+A EGLKPFC IYS+FMQR YDQV+HDV +Q
Sbjct: 478 GMDIFGKRFPKRTFDVGIAEQHAVTFAAGMAIEGLKPFCCIYSTFMQRGYDQVIHDVVIQ 537

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           KLPVR  +DRAGLVG DGPTH GSFD++++  LP++V+MAPSDE EL +++ TA   +D 
Sbjct: 538 KLPVRMILDRAGLVGNDGPTHHGSFDLSYLGALPDIVIMAPSDELELMNLLETAYETNDL 597

Query: 551 PSCFRYPRGNGIGV-------------ELPPGNKGIPLEVGKGRILIEGE---------- 587
           PS  RYPRG G G+             ELP   +G  +  GKGRI+              
Sbjct: 598 PSVVRYPRGAGYGLETLKSELGYEGLEELP--KRGKAVARGKGRIIRRSAVVPSTAAPGT 655

Query: 588 -RVALLGYGTAVQSCLAASALLESN--GLRLTVADARFCKPLDHALIRSLAKSHEVLITV 644
            RVALL  GT +   + A+  +E N  G+ +TVADARF KPLD  ++ SLA  H+VLITV
Sbjct: 656 CRVALLSVGTRLLDTVHAAKEIEENLPGVSVTVADARFVKPLDKEMVSSLAMEHDVLITV 715

Query: 645 EEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 703
           EE S+GGFGS V QFL  +GLLD G ++ R +VLPDR+I+ G  +DQ  QAGL   HI  
Sbjct: 716 EENSVGGFGSFVQQFLLNEGLLDGGKLRLRSMVLPDRFIEAGPQSDQYDQAGLAARHIVE 775

Query: 704 TV 705
            V
Sbjct: 776 KV 777


>gi|414171842|ref|ZP_11426753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
 gi|410893517|gb|EKS41307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
          Length = 643

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/646 (59%), Positives = 469/646 (72%), Gaps = 17/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S    TPLLD    P  ++ L   +L+Q ADELR + I  VS TGGH G+ LGV+ELT A
Sbjct: 2   SNSSKTPLLDAAPTPDLLRKLKPEQLRQFADELRLETIDTVSVTGGHFGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DRI+WDVGHQ YPHKILTGRRD++ T+R  +GLSGFTKR+ESEYD FG  H
Sbjct: 62  LHYVFNTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRMGNGLSGFTKRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDL G KNNV+AVIGDG+M+AG AYEAMNNAG + S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLTGGKNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L+RL S +     RE  K +  ++     + A + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLARLLSGKTYASAREALKNLAHKLPKFFEDRALRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G   TLFEELG +Y+GP+DGHN+D L+ +L  V++  T GP+L+HVVT+KG+GY
Sbjct: 233 ARGMVTGG--TLFEELGFFYVGPIDGHNLDHLLPVLTNVRDAPT-GPILVHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE + DKYH VAKFD ATG Q K+ +   SYT+ F ++L+ EA  D  +VAI AAM G
Sbjct: 290 APAEASDDKYHAVAKFDVATGAQAKAKSNAPSYTSVFGQSLVKEARKDDKIVAITAAMPG 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++F + FP R FDVGIAEQHAVTFAAGLA EG KPFCAIYS+F+QR YDQVVHDV 
Sbjct: 350 GTGVDIFGKAFPDRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVG DGPTH GSFD  ++ CLP  V+MA +DEA+L HMVAT  AID
Sbjct: 410 IQRLPVRFAIDRAGLVGQDGPTHAGSFDNVYLGCLPGFVIMAAADEADLVHMVATQVAID 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG---ERVALLGYGTAVQSCLAAS 605
           D PS  RYPRG G GVE+P    G+PL +GKGRI+ E     +VALL +G  +  CL A+
Sbjct: 470 DAPSALRYPRGEGRGVEMP--EFGVPLPIGKGRIMREASGKSKVALLSFGARLGECLKAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
             LE+ GL  TVADARF KPLD  +I  LA+ HEVLIT+EEGSIGGFG+HV+Q LA  G 
Sbjct: 528 DELETLGLSATVADARFMKPLDLDMILKLAREHEVLITIEEGSIGGFGTHVLQALADHGA 587

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           LD  ++ R LVLPD +IDH SPA    QAGL    I A VF  LG+
Sbjct: 588 LDRGLRVRTLVLPDIFIDHDSPAKMYEQAGLDAKGIVAKVFEALGR 633


>gi|402820429|ref|ZP_10869996.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
           IMCC14465]
 gi|402511172|gb|EJW21434.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
           IMCC14465]
          Length = 643

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/648 (58%), Positives = 481/648 (74%), Gaps = 14/648 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +++  TPLLD I  P  ++ LS  +L QLA+ELRA+ +  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   TKKLETPLLDKIKLPEDVRALSEEQLGQLAEELRAETVSAVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  H
Sbjct: 62  LHYVFNTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV RDLK   NNVVAVIGDGAM+AG AYEAMNNAG +D  +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVARDLKETDNNVVAVIGDGAMSAGMAYEAMNNAGAMDGRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ L+RL S    R+LR+  KG+  ++   + E + K++EY
Sbjct: 181 DMSIA--------PPVGAMSAYLARLLSGSGYRKLRKSLKGIASKMPRSIKEASRKMEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            RG  +G   TLFEE+G YY+GP+DGHN+D L+ +L+ V+++   GP+L+HVVT+KG GY
Sbjct: 233 TRGFWTGG--TLFEEIGFYYVGPIDGHNLDHLLPVLQNVRDS-VEGPILVHVVTQKGHGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV+KFD  TG Q K S    SYT+ FA++LI EAE DK++VA+ AAM  
Sbjct: 290 APAEAAADKYHGVSKFDIVTGLQSKPSTNIPSYTSVFADSLIKEAETDKNIVAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   +P RCFDVGIAEQHAVTFAAG+A EGLKPF AIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLDKFAHIYPDRCFDVGIAEQHAVTFAAGMATEGLKPFVAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +QKLPVRFA+DRAGLVGADGPTH GSFD+ ++  LP+ V+MA +DEAEL +MV TAA I+
Sbjct: 410 IQKLPVRFAIDRAGLVGADGPTHAGSFDMAYLGALPDFVLMAAADEAELVNMVHTAAQIN 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           DRPS FRYPRG+  G+ +P   K   LE+GKGRI+ EG+++A+L YGT +     A+  L
Sbjct: 470 DRPSAFRYPRGSATGIAMP--EKPQLLEIGKGRIIREGQQIAILSYGTRLGEASLAADRL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           +  G   TVADARF KPLD  LI  LA+ HE+LITVEEG +GGFG+HV+ FLA++G+LD 
Sbjct: 528 DKEGHSTTVADARFMKPLDKELILQLAREHEILITVEEGGLGGFGAHVLHFLAEEGVLDA 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            +K R L LPD +ID  SP      AGL   +I   V +++G+  + +
Sbjct: 588 GLKVRTLTLPDIFIDQDSPERMYDAAGLNSDNIYDAVKDVIGRGEKTI 635


>gi|407784767|ref|ZP_11131916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
           B30]
 gi|407204469|gb|EKE74450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
           B30]
          Length = 642

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/648 (59%), Positives = 467/648 (72%), Gaps = 18/648 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TP LD ++ P  +K LS  ELK+LA ELR + I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPATPTLDRVHVPADLKALSDPELKRLAHELRQETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+APKDR++WDV HQ YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDAPKDRLIWDVSHQCYPHKILTGRRDRIRTLRTEGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNN----VVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G   N     +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGAPENGIGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PP GALSS L+RL +  P +EL+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPTGALSSYLTRLYAGAPFQELKAAAKGAVSLLPHPFQEGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +GM  G   TLFEELG  Y+GP+DGH++D L+++L  VK  + TGP+LIH +T+K
Sbjct: 233 AKEMLKGMTVGG--TLFEELGFSYVGPIDGHDLDQLLSVLRTVK-ARATGPILIHAITQK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE   DK H   KFD  TG+Q K+ +   SYT+ FA+ALI EA  D  +VA+ A
Sbjct: 290 GKGYAPAEGRPDKGHATGKFDMVTGEQKKAKSNAPSYTSVFAKALIQEAGFDDKIVAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  RFPTRCFDVGIAEQH VTF AGLA  G+KPFC +YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERFPTRCFDVGIAEQHGVTFCAGLAAGGMKPFCTMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+A LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGMVVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G+GV++P   +G+PLE+GKGR+++EG RVALL +GT ++S L A
Sbjct: 470 AAHDDGPIAFRYPRGEGVGVQMP--ERGVPLEIGKGRVVVEGTRVALLSFGTRLESSLKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  TVADARF KPLDH LIR L  +HE LIT+EEG++GGFGSHV  FLA +G
Sbjct: 528 AENLAAKGISCTVADARFAKPLDHDLIRDLVANHEALITIEEGAVGGFGSHVADFLANEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           L D  +K+R + LPD +ID  SP    A AGL    I A V + LG T
Sbjct: 588 LFDRGLKFRSMTLPDTFIDQASPEAMYAMAGLNTPDIEAKVLSALGVT 635


>gi|395790245|ref|ZP_10469739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
 gi|395426896|gb|EJF93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
          Length = 640

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/642 (59%), Positives = 475/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I  P  ++ L   +L QLA+ELRA+ I  VS TGGHLG+ LGVIELTVALH
Sbjct: 3   RPLTPLLDYICVPQDLRALPESDLVQLANELRAETINAVSVTGGHLGAGLGVIELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P+DRI+WDVGHQ YPHKILTGRRDK+ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPEDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGM+V   LK   + N+++VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMSVASALKVETRRNIISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K ++K++     E A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPAYRSLRERVKVLSKKLPKFFGEKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ELG YY+GP+DGHN++ L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFDELGFYYVGPIDGHNLEHLLPVLKNVREYPY-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV  FD  TGKQ  + + + SYT  F++ALI EA  D  ++ I AAM  G
Sbjct: 291 PAEASSDKYHGVNSFDVVTGKQINTQSNSLSYTKVFSKALIEEASHDDKIIGITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F++ LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLSTLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGRIL EG R+AL+ +GT +   L A+ +LE
Sbjct: 471 GPLSFRYPRGEGVGIDLP--ERGELLEIGKGRILREGSRIALVCFGTRMSEVLMAAGMLE 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
             GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QFLAQ+GLL+  
Sbjct: 529 EEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L LPD Y++HGSP   L++ GL    I  TVF  LG+
Sbjct: 589 LKVRTLKLPDEYLNHGSPEKVLSRIGLDAVGIINTVFTALGR 630


>gi|395765602|ref|ZP_10446196.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
 gi|395411156|gb|EJF77690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
          Length = 640

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/642 (59%), Positives = 476/642 (74%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I  P  ++ L   +L +LA+ELR++ I  VS TGGHLG+ LGVIELTVALH
Sbjct: 3   RPLTPLLDYICVPQDLRALPESDLVRLANELRSETIDVVSVTGGHLGAGLGVIELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P+DRI+WDVGHQ YPHKILTGRRDK+ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPEDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMA+   LK   K N+++VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAMASALKAETKRNIISVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K ++K++     E A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPAYRSLRERVKVLSKKLPKFFGEKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ELG YY+GP+DGHN++ L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFDELGFYYVGPIDGHNLEHLLPVLKNVREYPY-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV  FD  TGKQ K  +++ SYT  F++ALI EA  D  VV I AAM  G
Sbjct: 291 PAEASSDKYHGVNSFDIVTGKQVKIQSKSLSYTKVFSKALIEEASYDDKVVGITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D+
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDE 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGRIL EG R+AL+ +GT +   L A+++LE
Sbjct: 471 GPLSFRYPRGEGVGMDLP--ERGELLEIGKGRILREGNRIALVCFGTRMSEVLMAASMLE 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QF AQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFFAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L LPD Y+ HGSP   L++ GL    I  TVF  LG+
Sbjct: 589 LKVRTLKLPDEYLSHGSPEKVLSRIGLDAVGIINTVFTALGR 630


>gi|430002425|emb|CCF18206.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein [Rhizobium
           sp.]
          Length = 639

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/640 (59%), Positives = 476/640 (74%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + +P  ++ +  R+L QLA E+R ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDAVKFPADLRMIEDRDLPQLAREVRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ES+YD FG  HSST
Sbjct: 65  VFNTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESDYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  DL G K +V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAADLSGSKRHVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +RE+ K +T  +G        +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGVREIGKKLTAYLGKGFDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEE+G Y+IGP+DGH+ + L+ +L  V++    GPVLIHV T+KG+GYP A
Sbjct: 236 YVTGG--TMFEEMGFYHIGPIDGHSFEHLLPVLRNVRDNGQ-GPVLIHVCTQKGKGYPPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ F E+L+ EA  D+ +V I AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGTQAKAKPNAPSYTSVFGESLVQEARFDEKIVGITAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           ++     FP+R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV +Q 
Sbjct: 353 IDKLAEVFPSRTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRGYDQVVHDVAIQG 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  LE+GKGRI+ EG +VALL +GT ++ CL A+  L++ 
Sbjct: 473 ISFRYPRGEGVGVELP--ERGQILEIGKGRIVKEGSKVALLSFGTRLKDCLLAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ H+VLIT+EEG++GGFG+HV+ FLA +GLLD  +K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHDVLITIEEGALGGFGAHVLHFLATEGLLDQGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            RP+VLPD +++  SP    A+AGL  + I  TVFN LGQ
Sbjct: 591 VRPMVLPDVWMEQASPDAMYAKAGLDRAGIVTTVFNALGQ 630


>gi|398350482|ref|YP_006395946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii USDA
           257]
 gi|390125808|gb|AFL49189.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Sinorhizobium fredii
           USDA 257]
          Length = 645

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/642 (59%), Positives = 479/642 (74%), Gaps = 14/642 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++ P  +K +  ++L QLA ELRA++I  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 10  PATPLLDKVDVPDDLKKIDDKDLPQLASELRAEMIDAVSRTGGHLGAGLGVVELTIAIHK 69

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSST
Sbjct: 70  VFDTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSST 129

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  DL G+  NVVAVIGDGA++AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 130 SISAGLGMAVAADLDGKSRNVVAVIGDGALSAGMAYEALNNAGALDARLIVILNDN-DMS 188

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +REV K +T  +G  +     +  E+ARG
Sbjct: 189 IA--------PPTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARG 240

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEE+G Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GYP A
Sbjct: 241 YVTGG--TLFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNRR-GPVLIHVVTQKGKGYPPA 297

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT+ FA+AL+ EA +D  +VAI AAM  GTG
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALVQEASLDDKIVAITAAMPSGTG 357

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 358 LDRFAAVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD T++A LP  VVMA +DEAEL HMV TAAA DD P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLASLPGFVVMAAADEAELKHMVRTAAAYDDGP 477

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVELP   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L++ 
Sbjct: 478 ISFRYPRGEGVGVELP--ERGEILQIGKGRIIKEGTKVALLSFGTRLADCLLAAEDLDAA 535

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA+ HEVLIT+EEG+IGGF SHV+ FLA++GLLDG +K
Sbjct: 536 GLSTTVADARFAKPLDQELIRQLARHHEVLITIEEGAIGGFASHVLHFLAEEGLLDGGLK 595

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            RP+VLPD +++   P    A AGL  + I +TVF  LGQ +
Sbjct: 596 VRPMVLPDIWMEQAKPESMYASAGLDRAGIVSTVFKALGQKQ 637


>gi|300023488|ref|YP_003756099.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525309|gb|ADJ23778.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 635

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/638 (60%), Positives = 466/638 (73%), Gaps = 14/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L+  +L QLADELRA++I  VS TGGHLG+ LGVIELTVALH++F
Sbjct: 4   TPLLDRIGTPHELRRLAEDQLPQLADELRAEMIDAVSVTGGHLGAGLGVIELTVALHWIF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR ES YD FG  HSSTSI
Sbjct: 64  NTPEDRLIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV RDL G  NNV+AVIGDGAM+AG AYEAMNNAG  +  +IVILNDN  +S+ 
Sbjct: 124 SAALGMAVARDLSGGSNNVIAVIGDGAMSAGMAYEAMNNAGARNERLIVILNDN-DMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALS+ L+R  S+     LR+ AK + K +       AA+V+EY R + 
Sbjct: 183 --------PPTGALSAYLARATSSGTYLHLRDYAKQLAKMLPKQWERRAARVEEYTRHIW 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G     FEELG YY+GP+DGH+   L+ +L+ V++ +   P+L+HVVT+KG+GY  AE 
Sbjct: 235 QGG--AWFEELGFYYVGPIDGHDFSQLLPVLKNVRDAEQA-PILVHVVTKKGKGYAPAEA 291

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYHGV KF+  TG Q K      SYT  FA++LIAEA  D  +VAI AAM  GTGL+
Sbjct: 292 ADDKYHGVNKFNVVTGAQVKPKPNAPSYTKVFADSLIAEARKDDRIVAITAAMPSGTGLD 351

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA EG KPF  IYS+F+QRAYDQVVHDV +QKLP
Sbjct: 352 YFGKEFPERTFDVGIAEQHAVTFAAGLATEGYKPFATIYSTFLQRAYDQVVHDVAIQKLP 411

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD++++ CLP+ V+MA +DEAEL HMVAT  AIDDRPS 
Sbjct: 412 VRFALDRAGLVGADGATHAGSFDISYLGCLPDFVIMAAADEAELVHMVATQVAIDDRPSA 471

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GV+LP    G+ LE+GKGRI+ EG +VALL  GT +  CL A+  L+S GL
Sbjct: 472 LRYPRGEGVGVDLP--QTGVALEIGKGRIVREGSKVALLSLGTRLAECLKAADQLQSFGL 529

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  LIR LA +HEVL+TVEEGS+GGFGS+V+QFL+ +GLLD  ++ R
Sbjct: 530 STTVADARFAKPLDTRLIRDLALNHEVLVTVEEGSVGGFGSYVLQFLSDEGLLDRGLRVR 589

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
             VLPD +IDHG P      AGL  S I  TVF  LG+
Sbjct: 590 TKVLPDVFIDHGKPEVMYEDAGLNASGIVKTVFAALGR 627


>gi|121602344|ref|YP_988719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           KC583]
 gi|421760528|ref|ZP_16197344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           INS]
 gi|166198602|sp|A1URW6.1|DXS_BARBK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120614521|gb|ABM45122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           KC583]
 gi|411174945|gb|EKS44972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           INS]
          Length = 638

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/650 (59%), Positives = 477/650 (73%), Gaps = 16/650 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD +  P+ ++ L   +L +LADELRA++I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RPLTPLLDCVLSPLDLRALPASDLARLADELRAEMIDVVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           Y+FN P DRI+WDVGHQ YPHKILTGRRDK+ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YIFNTPDDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESIYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMA+   LK   + NV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAMASALKAEERRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K  +K+      E A++ +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPSYRHLRERIKLFSKKFPKFFSEQASRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ELG YY+GP+DGHN + L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFDELGFYYVGPIDGHNFEHLLPVLKNVR-AYPNGPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE++ADKYHGV +FD  TGKQ K+ +   SYT  F++ALI EA  D  +VAI AAM  G
Sbjct: 291 PAEESADKYHGVNRFDVVTGKQVKAQSTRLSYTKVFSKALIEEATHDHKIVAITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +F  R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDSFAEKFSDRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAA  D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAVYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG GIG++LP   +G  LE+GKGR+L EG RVAL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGEGIGMDLP--QRGEVLEIGKGRVLREGSRVALVCFGTQLSEVLVAADELA 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G+  TVADARF KPLD  L+R LA+ HEV IT+EEG+IGGFG+HV+QFLAQ+ LL+  
Sbjct: 529 AEGISTTVADARFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG-QTREALEI 718
           +K R L LPD Y++HGSP   L++ GL    I   VF  LG +TR+ L+I
Sbjct: 589 LKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSLGYETRKTLQI 638


>gi|402772875|ref|YP_006592412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
 gi|401774895|emb|CCJ07761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
          Length = 642

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/649 (59%), Positives = 477/649 (73%), Gaps = 17/649 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L   ELKQ+A++LR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDRIASPEDLRKLRPNELKQVAEDLRRETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+D+++WDVGHQTYPHKILTGRRD++ T+R   GLSGFTKR+ESEYD FG GHSSTSI
Sbjct: 66  DTPRDKVIWDVGHQTYPHKILTGRRDRIRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL    N+VVAVIGD +M+AG AYEA+NNAG L S +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVARDLADGDNHVVAVIGDSSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+S+ L+RL S    R +RE A+ +   +   +++ A K +E++R  I
Sbjct: 185 --------PPTGAMSAYLARLVSGGAYRSIREAARQLASHLPRFIYDKARKAEEFSRSFI 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T+FEELG YY+GP+DGHN+D L+ +L+ V++ K  GPVL+HVVT+KG+G+  AE+
Sbjct: 237 TGG--TMFEELGFYYVGPIDGHNLDHLLPVLKNVRD-KDDGPVLVHVVTQKGKGFGPAEE 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADK H V KFD ATG Q K  A   +YT  FA+AL+AEAE D  +VAI AAM  GTGL+
Sbjct: 294 SADKCHAVNKFDVATGVQIKPKANAPTYTNIFAKALVAEAEHDDKIVAITAAMPSGTGLD 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDV IAEQHAVTFAAGLACEG KPFCA+YS+F+QR YDQVVHDV +Q LP
Sbjct: 354 IFGKAFPHRTFDVAIAEQHAVTFAAGLACEGYKPFCALYSTFLQRGYDQVVHDVAIQNLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADGPTH G+FD+ ++ CLP  V+MAPSDEAEL HMVATAAA DD PS 
Sbjct: 414 VRFAIDRAGLVGADGPTHAGAFDLAYLGCLPGFVIMAPSDEAELMHMVATAAAYDDGPSA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+GV++P   +G  LE+GKGRIL EG +VA+L  GT +   L A+A LES G+
Sbjct: 474 FRYPRGEGLGVDVP--ERGDILEIGKGRILREGSKVAILSLGTRLADSLKAAAELESYGV 531

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT---V 670
             TVADARF KP+D  L+R LA +HE LI VEEGSIGGFG+ V Q L++DGLLDG     
Sbjct: 532 STTVADARFAKPIDRDLLRRLAANHEALIVVEEGSIGGFGAQVFQALSEDGLLDGVRGAF 591

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           K+R + LPD YIDH      +A+A L    I      +LG  + A  +M
Sbjct: 592 KFRSMTLPDAYIDHDKHELMIAKAMLDSKAIIGKALELLGDEKAAARVM 640


>gi|158424735|ref|YP_001526027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azorhizobium caulinodans
           ORS 571]
 gi|172047993|sp|A8IBS1.1|DXS_AZOC5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|158331624|dbj|BAF89109.1| deoxyxylulose-5-phosphate synthase [Azorhizobium caulinodans ORS
           571]
          Length = 641

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/628 (60%), Positives = 464/628 (73%), Gaps = 14/628 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+     ++ L   +L QLADELRA+ I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 6   TPLLDTVRDASDVRRLPEEKLSQLADELRAETISAVSVTGGHLGAGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSSTSI
Sbjct: 66  NTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G   NV+AVIGDGAM+AG AYEAMNNAG +DS +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVARDLSGGDRNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+S+ L+RL S R    LRE+ K +   +   + + AAK +E+ARG  
Sbjct: 185 --------PPTGAMSAYLARLISGRTYLSLREIGKQLAGHLPKFVKDGAAKAEEFARGFW 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEE+G YY+GP+DGHN++ L+ +L+ V++ KT GP+L+HVVT+KG+GYP AE 
Sbjct: 237 TGG--TLFEEMGFYYVGPIDGHNLEHLLPVLKNVRDAKT-GPILVHVVTQKGKGYPPAEA 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV KFD  TG Q K+ +   SYT  FAE LI EA  D  VVAI AAM  GTGL+
Sbjct: 294 SADKYHGVVKFDVVTGAQVKAKSNAPSYTRVFAETLIDEARRDDKVVAITAAMPSGTGLD 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + FP R FDVGIAEQHAVTFAAGLA EG +PFCA+YS+F+QR YDQVVHDV LQ LP
Sbjct: 354 LFGQAFPQRTFDVGIAEQHAVTFAAGLAAEGYRPFCALYSTFLQRGYDQVVHDVALQGLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH G+FD+  + CLP   VMAP+DEAEL HM+ATA   D  P  
Sbjct: 414 VRFAIDRAGLVGADGATHAGAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGPIA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG G+GVE P   KG  L +GKGR++ EG+ +A L  GT + +CL  +  L S G+
Sbjct: 474 FRFPRGEGVGVERP--EKGERLPIGKGRVVREGQDIAFLSLGTRLAACLDVAERLSSLGI 531

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KP+D  LI  LA++H  L+ VEEGS+GGFGS V+QFL+ +GL+DG +K R
Sbjct: 532 SATVADARFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDGGLKVR 591

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHI 701
            L LPD YIDH +PA QLA+AGL    I
Sbjct: 592 ALTLPDTYIDHDTPAAQLAEAGLDADGI 619


>gi|330814377|ref|YP_004358616.1| octaprenyl-diphosphate
           synthase/Dimethylallyltransferase/Geranyltranstransferas
           e [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487472|gb|AEA81877.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 636

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/648 (56%), Positives = 474/648 (73%), Gaps = 14/648 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDTI+YP  ++ L  ++L QLA ELR +++  VS TGGHLG+ LGV+ELT+A+HY
Sbjct: 2   PNTPLLDTIHYPADLRKLEKKQLTQLALELREELVDAVSFTGGHLGAGLGVVELTIAIHY 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +FN P DR++WDVGHQ YPHKILTGRR+K+ T+RQ  GLSGFTKR+ES+YD FG  HSST
Sbjct: 62  LFNTPDDRLIWDVGHQAYPHKILTGRRNKIRTLRQGGGLSGFTKRAESQYDPFGAAHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV RDL+G+ N++++VIGDGAM+AG AYEAMNNAG +DS +IVILNDN  +S
Sbjct: 122 SISAGLGMAVARDLEGKNNSIISVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVGA+SS L++L S +     R   K ++ +  G + +   + +EY RG
Sbjct: 181 IA--------PPVGAMSSYLAKLLSGKKYIGFRNFFKKISDKFPGKLKQRIGQAEEYLRG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEE+G +Y+G VDGH+ D L+ +LE VKN+   GP LIH +T+KG+GY  A
Sbjct: 233 M--AVGGTLFEEMGFFYVGSVDGHSFDQLLPVLENVKNSTHEGPFLIHAITQKGKGYQPA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E + DKYHGV KF+ ATG+Q KSS+   SYT  F E L A A+ D  +VA+  AM  GTG
Sbjct: 291 EDSKDKYHGVTKFNVATGEQSKSSSNKPSYTNVFGETLAAHAQQDNKIVAVTGAMPSGTG 350

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           +N+F ++FP R FDVGIAEQHAVTFAAGLA EG KP+ AIYS+F+QRAYDQVVHDV +Q 
Sbjct: 351 INIFQKQFPKRTFDVGIAEQHAVTFAAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQS 410

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADGPTH GSFD+T++A LPN VVMA SDEAEL  M+ T+  I+DRP
Sbjct: 411 LPVRFAIDRAGLVGADGPTHAGSFDITYLATLPNFVVMAASDEAELVRMINTSVDINDRP 470

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNGIG+ELP  ++   L++GKGR++ EG  V +L  GT ++ C  A+  L++ 
Sbjct: 471 CAFRYPRGNGIGIELPSIDE--KLKIGKGRVVQEGTNVCILSLGTRLEECKIAAKELKNK 528

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           G+  T+ DARF KPLD  LI   A+ HE+LIT+EEGSIGGFGSHV   LA+ G+ D  +K
Sbjct: 529 GISTTIVDARFAKPLDEELIIRCAREHEMLITIEEGSIGGFGSHVANLLAEKGIFDKGLK 588

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +R L+LPD +ID  +P      AGL    I   + ++   ++EA++I+
Sbjct: 589 FRSLMLPDVFIDQDTPEKMYDVAGLNAKQIKEKILDVF-FSKEAIKII 635


>gi|395785879|ref|ZP_10465607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
 gi|423717226|ref|ZP_17691416.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
 gi|395424337|gb|EJF90524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
 gi|395427441|gb|EJF93532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
          Length = 640

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/639 (61%), Positives = 468/639 (73%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD++  P  ++ +    L  LA+ELRA+ I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDSVKNPRDLREMDESHLSALAEELRAETIDVVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRRDQIRTLRQAGGLSGFTKRSESIYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   L+   + NV+AVIGDG+M+AG AYEAMNNAG LD+ +IVILNDN  +S+
Sbjct: 126 SAGLGMAVASALENNTQRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S+   R LRE AK +TK++     + A + +EYARG 
Sbjct: 185 A--------PPTGAMSAYLARLVSSPAYRTLRERAKALTKKLPKFFWDKAKRSEEYARGF 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           ++G   TLFEELG YYIGPVDGHN+D L+ +L+ V+     GPVL+HVVT KG+GY  AE
Sbjct: 237 LTGG--TLFEELGFYYIGPVDGHNLDHLLPVLKNVRE-HPNGPVLVHVVTHKGKGYAPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            A+DKYHGV +FD  TGKQ K+++   SYT  FA+ALI EA  D+ +V I AAM  GTGL
Sbjct: 294 AASDKYHGVNRFDIVTGKQVKANSNAPSYTKIFAKALIEEARHDEKIVGITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F   FP R FDVGIAEQHAVTFAAG+A EG KPF AIYS+F+QR YDQ+VHDV +Q L
Sbjct: 354 DAFGEVFPARMFDVGIAEQHAVTFAAGMASEGYKPFVAIYSTFLQRGYDQIVHDVSIQNL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD  F+  LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDTGFLTALPGFVVMAPSDEVELMHMVRTAAAYDKGPI 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG G+G+ELP   +G  LE+GKGRIL +G +VAL+G+GT +Q  L A   L + G
Sbjct: 474 SFRYPRGEGVGIELP--ERGELLEIGKGRILKQGTKVALIGFGTRLQEALLAGEELGAAG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  LIR LA++HEVLIT+EEG+ GGFG+ V+QFLAQDGLLD  +K 
Sbjct: 532 LSTTVADARFAKPLDEDLIRRLAQNHEVLITIEEGASGGFGAQVLQFLAQDGLLDKGLKI 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L LPD Y+ HG     LAQ GL    I   VF  LG+
Sbjct: 592 RSLTLPDDYLQHGPQEMVLAQIGLDRYGIIQAVFAALGR 630


>gi|14334452|gb|AAK59424.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
          Length = 406

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/405 (87%), Positives = 385/405 (95%)

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           MISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHVVTEKGRGYPYA
Sbjct: 1   MISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYA 60

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+A DKYHGV KFDPATG+QFK++ +TQSYTTYFAEAL+AEAEVDKDVVAIHAAMGGGTG
Sbjct: 61  ERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTG 120

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           LNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK
Sbjct: 121 LNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 180

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+MVATA AIDDRP
Sbjct: 181 LPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRP 240

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           SCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQSCL A+ +LE  
Sbjct: 241 SCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEER 300

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 301 GLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 360

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           WRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 361 WRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 405


>gi|297807177|ref|XP_002871472.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317309|gb|EFH47731.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 701

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/668 (56%), Positives = 481/668 (72%), Gaps = 29/668 (4%)

Query: 57  VCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRAD---VIFNVSKTG 113
           VC SL    EY  ++  TP+LDTI  P+ +KNLS++ELK LADE+R +   V++   KT 
Sbjct: 59  VCCSLPNTDEYCDEKFETPILDTIETPLQLKNLSVKELKLLADEIRTELHSVLWK--KTQ 116

Query: 114 GHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGF 173
             +  S   IELT+ALHYVF AP D ILWD   QTY HK+LT R   + + RQ +G SG 
Sbjct: 117 KSMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQKNGTSGV 175

Query: 174 TKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNA 233
           T + ESEYD FGTGH   S SAGLG+AV RD+KG+++ VVAVI +  +TAGQAYEAM+NA
Sbjct: 176 TSQLESEYDSFGTGHGCNSTSAGLGLAVARDIKGKRDRVVAVIDNATITAGQAYEAMSNA 235

Query: 234 GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ 293
           GYLDS+MIVILND++  SL     +G    + ALSS +S++QS++  R+ RE+AK +TK+
Sbjct: 236 GYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKIFRKFRELAKSMTKR 294

Query: 294 IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT 353
           IG  M+E AAKVDEYARGM+  +GSTLFEELGLYYIGPVDGHN++DLV +L EV +  + 
Sbjct: 295 IGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSM 354

Query: 354 GPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEA 413
           GPVL+HV+TE+ R                  D  TGK      R ++Y+  F EAL+ EA
Sbjct: 355 GPVLVHVITEENR------------------DAETGKNIMVKDR-RTYSDCFVEALVMEA 395

Query: 414 EVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS 473
           E D+D+V +HA M     L  F  RFP R F+VG+AEQHAVTF+AGL+  GLKPFC I S
Sbjct: 396 EKDRDIVVVHAGMEMDASLITFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPS 455

Query: 474 SFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSD 533
           +F+QRAYDQVVHDVD Q+  VRF +  AGLVG+DGP  CG+FD+ FM+ LPNM+ MAP+D
Sbjct: 456 AFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPAD 515

Query: 534 EAELFHMVATAAAIDDRPSCFRYPRGNGIGVE-LPPGNKGIPLEVGKGRILIEGERVALL 592
           E EL +MVATAA + DRP CFR+PRG+ +    L P   G+P+E+G+GR+L+EG+ VALL
Sbjct: 516 EDELVNMVATAAYVTDRPVCFRFPRGSIVNRNYLVP--TGLPIEIGRGRVLVEGQDVALL 573

Query: 593 GYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGF 652
           GYG  VQ+CL A +LL   GL +TVADARFCKPLD  L+R L ++H++LITVEEG +GGF
Sbjct: 574 GYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKILITVEEGCVGGF 633

Query: 653 GSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           GSHV QF+A DG LDG +KWRP+VLPD YI+  SP +QLA AGLT  HIAAT  ++LG+T
Sbjct: 634 GSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAATALSLLGRT 693

Query: 713 REALEIMS 720
           REAL +MS
Sbjct: 694 REALLLMS 701


>gi|381165922|ref|ZP_09875141.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Phaeospirillum molischianum DSM 120]
 gi|380684906|emb|CCG39953.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Phaeospirillum molischianum DSM 120]
          Length = 641

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/642 (60%), Positives = 481/642 (74%), Gaps = 12/642 (1%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P  PLLD I+ P   ++ ++ EL +L +E+R  +I +VS TGGHL + LGV ELTVALHY
Sbjct: 9   PKAPLLDRISGPEDFRDFTVEELIRLTEEVRQTMIHSVSYTGGHLAAGLGVAELTVALHY 68

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P D+++WDVGHQ YPHKI+TGRRDKM  +R   GLSGFT+R+ESEYD FG GHSST
Sbjct: 69  VFDTPNDKLIWDVGHQAYPHKIVTGRRDKMLGLRHGGGLSGFTRRAESEYDPFGAGHSST 128

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LGMAVGRDL+G + N++AVIGDGAM+AGQAYEAMNNAG   S ++V+LNDN  +S
Sbjct: 129 SISAALGMAVGRDLQGTQKNIIAVIGDGAMSAGQAYEAMNNAGAQGSRLVVVLNDN-DMS 187

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +          PVGA+S+ LSRL S+     +R +AK + + +  P+   A + +EYARG
Sbjct: 188 IAH--------PVGAMSAYLSRLMSSPKYHSIRHLAKDLVQLLPPPLERAAKRAEEYARG 239

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M++G G TLFEELG +YIGPVDGHN + L+ +L+ V+++ +  PVL+HVVT+KG+GY  A
Sbjct: 240 MVTGGG-TLFEELGFFYIGPVDGHNFEHLLPVLKNVRDSDSNTPVLLHVVTKKGKGYAPA 298

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV +FD  TG+  K  A   SYT+ FA+AL+AEAE D  VVAI AAM GGTG
Sbjct: 299 EAAADKYHGVGRFDVVTGQFEKPVANAPSYTSVFAKALLAEAEADDRVVAITAAMPGGTG 358

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F  RFP RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS+F+QRAYDQ+ HDV LQK
Sbjct: 359 LDRFSSRFPGRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSTFLQRAYDQLQHDVVLQK 418

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH G++D+  + C P++V+M PSDEAEL H VATAA+IDDRP
Sbjct: 419 LPVRFAIDRAGLVGADGATHAGAYDLALLGCQPDIVIMCPSDEAELMHAVATAASIDDRP 478

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S FRYPRG G+G+ELP  ++G  L +GKGRIL EG RVA+L  GT +   L A+  L + 
Sbjct: 479 SAFRYPRGEGMGIELP--DRGSVLPIGKGRILREGNRVAILTLGTRLVEVLKAADELTAL 536

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  L+  LA+ HEVLIT+EEGSIGGFGSHV+Q LA  G LD  +K
Sbjct: 537 GLSPTVADARFMKPLDEDLVLRLAREHEVLITIEEGSIGGFGSHVLQLLASQGALDRGLK 596

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            RP++LPD +I+H +  +Q  + GL  S I  T  + LG  +
Sbjct: 597 IRPMILPDIFIEHDTQWEQYEKVGLNASGIVKTALSALGDPK 638


>gi|319408216|emb|CBI81869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella schoenbuchensis
           R1]
          Length = 640

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/642 (59%), Positives = 472/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           R  TPLLD I +P  ++  S  +L QLA+ELRA+ I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RSLTPLLDRICFPQDLRAFSESDLVQLANELRAETIDAVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P D+I+WDVGHQTYPHKILTGRRDK+ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDKIIWDVGHQTYPHKILTGRRDKIRTLRQDGGLSGFTKRSESVYDSFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LK   + N++ VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAVASMLKAEERRNIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K ++K++     + A   +E+A
Sbjct: 182 MSIA--------PPTGAMSAYLARLVSRPSYRSLREQVKILSKKLPKFFSDKARLSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   +LFEELG YY+GP+DGHN++ L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--SLFEELGFYYVGPIDGHNMNHLLPVLKNVREYPN-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ ++   YT  F++ALI EA  D  +VAI AAM  G
Sbjct: 291 PAEVSSDKYHGVNRFDVVTGKQVKTQSKFLPYTKVFSKALIEEASHDDKIVAITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP + FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDSFAEKFPDKMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG   G++LP   +G  LE+GKGRIL EG ++AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGESSGIDLP--QRGEVLEIGKGRILCEGSKIALVCFGTRLSEVLIAANELA 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  LIR LA+ HEVL+T+EEG++GGFG+HV+QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLIRRLAREHEVLVTIEEGAMGGFGAHVLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HGSP   L+  GL  + I  TVFN LG+
Sbjct: 589 LKVRTLKFPDEYLNHGSPNKVLSSIGLDATGIINTVFNALGR 630


>gi|399039198|ref|ZP_10734847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
 gi|398062884|gb|EJL54649.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
          Length = 638

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/643 (58%), Positives = 471/643 (73%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQPPKTPLLDKVTYPADLRQLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VFN P+DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  +L      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVASELDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNVDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ + L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NAEGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K      SYT+ FAEAL+ EAE+D  +V I AAM  
Sbjct: 290 APAEAAADKYHGVNKFDVITGAQAKVKPNAPSYTSVFAEALVQEAELDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLASVFPSRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD TF+A LP  VVMA +DEAEL HMV TAAA D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+G+E+P   +G  L++GKGR++ EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGIEMPA--RGEILQIGKGRVVKEGSKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE+LITVEEG+IGGFGS V+QFLA DGLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHELIRQLARHHEILITVEEGAIGGFGSQVIQFLAMDGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKIRSLVMPDVWMEQAKPEVMNAHAGLDRAGIVSTVFKALGR 630


>gi|395778555|ref|ZP_10459067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           Re6043vi]
 gi|423715133|ref|ZP_17689357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           F9251]
 gi|395417763|gb|EJF84100.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           Re6043vi]
 gi|395430617|gb|EJF96659.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           F9251]
          Length = 635

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/639 (59%), Positives = 473/639 (74%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD + +P  ++ L    L QLA+ELRA+ I  VS TGGHLG+ LGV+ELTVALHY+F
Sbjct: 6   TPLLDRVCFPQDLRALPESYLVQLANELRAETIDAVSVTGGHLGAGLGVVELTVALHYIF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQTYPHKILTGRR+K+ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   LK   + N++AVIGDGAM+AG AYEAMNNAG LD+ +IV+LNDN  +S+
Sbjct: 126 SAGLGMAVASALKAEIRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S  L+RL S    R LRE  K +++++     + A + +E+ARG+
Sbjct: 185 A--------PPTGAMSGHLARLVSRPSYRHLRERVKILSEKLPKFFLDKARRSEEFARGL 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLF+ELG YY+GP+DGHN   L+ +L+ V+     GPVL+HVVT KG+GYP AE
Sbjct: 237 LVGG--TLFDELGFYYVGPIDGHNFGHLLPVLKNVRQYPN-GPVLVHVVTHKGKGYPPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            ++DKYHGV +FD  TG+Q K+ +    YT  F++ALI EA  D  +V I AAM  GTGL
Sbjct: 294 ASSDKYHGVNRFDVTTGRQVKAPSNILPYTKVFSKALIEEASHDDKIVGITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  +FP + FDVGIAEQHAVTFAAGLACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 354 DAFAEKFPKKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDELELMHMVRTAAAYDQGPI 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG GIG++LP   +G  LE+GKGR+L EG+R+AL+ +GT +   L A+ +LE+ G
Sbjct: 474 SFRYPRGEGIGIDLP--KRGEILEIGKGRVLREGDRIALVCFGTRMSEVLRAAEMLEAKG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+R LA+ HEVL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K 
Sbjct: 532 LSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L LPD Y++HGSP   L+  GL    I  TV   LG+
Sbjct: 592 RTLKLPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTALGR 630


>gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa]
 gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa]
          Length = 612

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/617 (61%), Positives = 458/617 (74%), Gaps = 12/617 (1%)

Query: 109 VSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDV---GHQTYPHKILTGRRDKMHTMR 165
           +SK      +SL  +ELTVA+H+VF+AP D+ILWD      QTY HKILTGRR  MHT+R
Sbjct: 1   MSKAQKDFKASLAAVELTVAIHHVFHAPVDKILWDFLVSCRQTYAHKILTGRRSLMHTLR 60

Query: 166 QTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQ 225
           Q DGLSGFT RSESEYD FG GH   SISAGLGMAV RD+KG++ ++V VIG+G   AGQ
Sbjct: 61  QKDGLSGFTSRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKREHIVTVIGNGTTMAGQ 120

Query: 226 AYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELRE 285
            YEAM NAGYLDS+MIVILND++  SL     +G    + ALSS LS+LQS++  R LRE
Sbjct: 121 VYEAMGNAGYLDSNMIVILNDSRH-SLHPKIEEGSKTSINALSSTLSKLQSSKSFRRLRE 179

Query: 286 VAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILE 345
           VAKGVTK+IG  M+ELAAKVDEYARGM+   GSTLFEELGLYYIGPVDGHN++DLV +L+
Sbjct: 180 VAKGVTKRIG--MYELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLVCVLQ 237

Query: 346 EVKNTKTTGPVLIHVVTEKGRGYPY---AEKAADKYHGVAKFDPATGKQFKSSARTQSYT 402
           EV   ++ GPVLIHV+TE+ +   +    E   ++  G+  F  + G    S+  TQ+Y+
Sbjct: 238 EVSTLESMGPVLIHVITEENQCAEHKQQTEAMGNQQEGM--FSVSAGYAVLSNMHTQTYS 295

Query: 403 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 462
             F EALI EAE DKD+V +HA         LF  RFP R F VG+AEQHAVTF+AGL+C
Sbjct: 296 DCFVEALIMEAEKDKDIVVVHAGKEMEPSFQLFQERFPHRFFYVGMAEQHAVTFSAGLSC 355

Query: 463 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 522
            GLKPFC I S+F+QRAYDQVVHDVD Q++PVRF +  AGLVG DGPT CG+FD+TFM+C
Sbjct: 356 GGLKPFCIIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGPDGPTMCGAFDITFMSC 415

Query: 523 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 582
           LPNM+VMAPSDE +L  MVATAA I+DRP CFRYPRG   G +      GIP+E+GKG  
Sbjct: 416 LPNMIVMAPSDEDQLVDMVATAAHINDRPVCFRYPRGAIAGTD-HYTRSGIPVEIGKGLT 474

Query: 583 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 642
           L+EG+ VALLGYGT VQ+CL A  LL   G+ +TVADARFCKPLD  L+R L ++H  L+
Sbjct: 475 LVEGKDVALLGYGTMVQNCLRAQTLLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLV 534

Query: 643 TVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIA 702
           TVEEGSIGGFGSHV QF+A DG LDG  KWRP+VLPD YI+H  P +QLA AGLT  HIA
Sbjct: 535 TVEEGSIGGFGSHVSQFIALDGQLDGRTKWRPIVLPDNYIEHALPNEQLALAGLTGHHIA 594

Query: 703 ATVFNILGQTREALEIM 719
           ATV  +LG++REAL +M
Sbjct: 595 ATVLRLLGRSREALLLM 611


>gi|395780213|ref|ZP_10460680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           085-0475]
 gi|395419480|gb|EJF85780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           085-0475]
          Length = 640

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/642 (59%), Positives = 472/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           +P TPLLD I  P  ++ L   +L QLADELRA+ I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   KPITPLLDCIRLPQDLRALPQSDLVQLADELRAETIDAVSITGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRR+++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRNRIRTLRQDGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LK   + N++AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAVASALKAEERRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K +++++     + A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPSYRNLRERVKILSEKLPKFFLDKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ELG YY+GP+DGHN   L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFDELGFYYVGPIDGHNFGHLLPVLKNVREYPD-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ +   SYT  F++ALI EA  D  +V+I AAM  G
Sbjct: 291 PAEASSDKYHGVNRFDIVTGKQIKTQSNALSYTKVFSKALIEEASHDDKIVSITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDSFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEIELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGR+L EG R+AL+ +G  +   L A+  L 
Sbjct: 471 GPISFRYPRGEGVGMDLP--QRGEVLEIGKGRVLREGNRIALVCFGARMTEVLVAADELR 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L LPD Y+DHGSP   L++ GL    I  TVF  LG+
Sbjct: 589 LKVRTLKLPDEYLDHGSPKTVLSRIGLDALGIINTVFTALGR 630


>gi|395784738|ref|ZP_10464560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
 gi|395421998|gb|EJF88220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
          Length = 640

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/642 (59%), Positives = 467/642 (72%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I +P  ++     +L QLADELRA+ I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RPLTPLLDRICFPQDLRVFPESDLVQLADELRAETIDAVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P D+I+WDVGHQTYPHKILTGRRDK+ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDKIIWDVGHQTYPHKILTGRRDKIRTLRQDGGLSGFTKRSESVYDSFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LK   + N++ VIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAVASMLKAEERRNIICVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDM 182

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
                       PP GA+S+ L+RL S    R LRE  K ++K++     + A   +E+A
Sbjct: 183 ---------SIAPPTGAMSAYLARLVSRPSYRSLREQVKILSKKLPKFFSDKARLSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   +LFEELG YY+GP+DGHN++ L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--SLFEELGFYYVGPIDGHNMNHLLPVLKNVREYPN-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ ++   YT  F++ALI EA  D  +VAI AAM  G
Sbjct: 291 PAEVSSDKYHGVNRFDVVTGKQVKTQSKFLPYTKVFSKALIEEASHDDKIVAITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDSFAEKFPDRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAA  D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAATYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG   G++LP   +G  LE+GKGRIL EG ++AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGESSGIDLP--QRGEVLEIGKGRILCEGSKIALVCFGTRLSEVLIAANELA 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  LI  LA+ HEVLIT+EEG++GGFG+HV+QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLILRLAREHEVLITIEEGAMGGFGAHVLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HGSP   L+  GL  + I  TVFN LG+
Sbjct: 589 LKVRTLKFPDEYLNHGSPNKVLSSIGLDATGIINTVFNALGR 630


>gi|395781816|ref|ZP_10462227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
           rattimassiliensis 15908]
 gi|395420471|gb|EJF86747.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
           rattimassiliensis 15908]
          Length = 635

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/639 (59%), Positives = 474/639 (74%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +++P  ++ L   +L QLADELRA+ I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDRVHFPQDLRALPESDLVQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQTYPHKILTGRR+K+ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKN-NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   L+  K  NV+AVIGDGAM+AG AYEAMNNAG LD+ +IV+LNDN  +S+
Sbjct: 126 SAGLGMAVASALRAEKRRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S    R LRE  K +++++     + A + +  ARG+
Sbjct: 185 A--------PPTGAMSAHLARLVSRPSYRHLRERVKLLSEKLPKFFLDKARRSEGIARGL 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLF ELG YY+GP+DGHN++ L+ +L+ ++     GPVL+HV+T KG+GYP AE
Sbjct: 237 LVGG--TLFNELGFYYVGPIDGHNLEHLLPVLKNIRECPK-GPVLVHVITHKGKGYPPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            + DKYHGV +FD  TGKQ K S+   SYT  F++AL+ EA  D  ++ I AAM  GTGL
Sbjct: 294 ASFDKYHGVNRFDITTGKQVKVSSNILSYTKVFSKALLEEACHDDKIIGITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  +FP + FDVGIAEQHAVTFAAGLACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 354 DSFAEKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F+A LP  +VMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFIVMAPSDELELMHMVRTAAAYDQGPI 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG G+G++LP   +G  LE+GKGRIL EG R+AL+ +G  +   L A+  LE+ G
Sbjct: 474 SFRYPRGEGMGIDLP--QRGELLEIGKGRILREGNRIALVCFGARMSEVLQAADALEAEG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+R LA  HEVL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K 
Sbjct: 532 LSTTVADARFAKPLDKDLMRRLAYEHEVLVTIEEGAIGGFGAHILQFLAQEGLLEHGLKV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L LPD+Y++HGSP   L++ GL    I  TVF  LG+
Sbjct: 592 RTLKLPDKYLNHGSPEKVLSRVGLDAIGILNTVFTTLGR 630


>gi|405378915|ref|ZP_11032824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
 gi|397324517|gb|EJJ28873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
          Length = 638

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/643 (58%), Positives = 469/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQSPKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  H
Sbjct: 62  IHNVFNTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  D+      V+AVIGDGA++AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVAADIDKTDRRVIAVIGDGALSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NANGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K      SYT  FAE L+ EA +D  VV I AAM  
Sbjct: 290 APAEAAADKYHGVNKFDVITGTQAKVKPNAPSYTNVFAETLVQEATLDDRVVGITAAMPT 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKFAEIFPSRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  LE+GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGVDMP--ERGQILEIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDHALIR LA+ HE+LITVEEGS+GGFGS V+QF+A DGLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHALIRQLARHHEILITVEEGSVGGFGSQVMQFMAMDGLLDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P   +A AGL  + I +TVFN LG+
Sbjct: 588 GLKVRSLVMPDIWMEQAKPEAMIAHAGLDRAGIVSTVFNALGR 630


>gi|87198187|ref|YP_495444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|118595595|sp|Q2GC13.1|DXS_NOVAD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|87133868|gb|ABD24610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 640

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/643 (58%), Positives = 468/643 (72%), Gaps = 18/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           SQ P TPLLDT+  P  ++ L+  +L+QLADELR ++I  V +TGGHLGS LGV+ELTVA
Sbjct: 2   SQEPATPLLDTVKTPDDLRKLAPTQLRQLADELRVEMISAVGQTGGHLGSGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVFN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FGT H
Sbjct: 62  IHYVFNTPEDRLVWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRSESEYDPFGTAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+   L GR    +AVIGDGAM+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAALGFAIANKLSGRLGKGIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+RL S+ P   LR++A+ +++++  P+HE A K DE+
Sbjct: 181 DMSIA--------PPVGGLSAYLARLVSSGPFLGLRDIARRLSRKLPRPLHEAARKTDEF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM    G TLFEELG YY+GP+DGHN+D L+ +LE V++    GP LIHVVT+KG+GY
Sbjct: 233 ARGM--AMGGTLFEELGFYYVGPIDGHNIDQLIPVLENVRDA-AEGPCLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG+Q K+ A   +Y   F E L   A+ D  + AI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVITGEQVKAKAAAPAYQNVFGETLAKLADADPTICAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F +  P R FDVGIAEQHAVTFAAGLA EG++PFCAIYS+F+QRA+DQVVHDV 
Sbjct: 350 GTGVDKFAKAHPDRTFDVGIAEQHAVTFAAGLAAEGMRPFCAIYSTFLQRAFDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT++A LPN+VVMA +DEAEL HM  TAA  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMTYTAALHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
             P  FRYPRGNG+GV LP     +P  LE+GKGRI+ +G +VALL  GT +   L A+ 
Sbjct: 470 SGPIAFRYPRGNGVGVPLPE----VPERLEIGKGRIIRQGSKVALLSLGTRLAEALKAAD 525

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            L++ GL  TVAD RF KPLD ALIR L  +H+V++TVEEGSIGG G+HV+   + +GL+
Sbjct: 526 QLDARGLSTTVADLRFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLV 585

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           DG +K R + LPD + DH +P  Q  +AGL   HI  TV   L
Sbjct: 586 DGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628


>gi|240850082|ref|YP_002971475.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
           as4aup]
 gi|240267205|gb|ACS50793.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
           as4aup]
          Length = 635

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/639 (59%), Positives = 475/639 (74%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I +P  ++ L   +L QLADELR   I  VS TGGHLG+ LGV+ELTVALHY+F
Sbjct: 6   TPLLDHICFPQDLRALPESDLVQLADELRTATIDAVSVTGGHLGAGLGVVELTVALHYIF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQTYPHKILTGRR+K+ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   LK   + N++AVIGDGAM+AG AYEAMNNAG LD+ +IV+LNDN  +S+
Sbjct: 126 SAGLGMAVASALKAETRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVVLNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S    R LRE  K +++++     + A + +E+ARG+
Sbjct: 185 A--------PPTGAMSAHLARLVSRPSYRHLRERVKMLSEKLPKFFLDKARRSEEFARGL 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLF+ELG YY+GP+DGHN+  L+ +L+ V+   + GPVL+HVVT KG+GYP AE
Sbjct: 237 LVGG--TLFDELGFYYLGPIDGHNLGHLLPVLKNVREYPS-GPVLVHVVTHKGKGYPPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            + DKYHGV +FD  TGKQ K+S+    YT  F++ALI EA  D  +V I AAM  GTGL
Sbjct: 294 ASPDKYHGVNRFDVTTGKQVKASSNILPYTKVFSKALIEEARHDDKIVGITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F ++FP + FDVGIAEQHAVTFAAGLACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 354 DSFAKKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F++ LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLSTLPGFVVMAPSDELELMHMVRTAAAYDQGPI 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG GIG++LP   +G  LE+GKGR+L EG R+AL+ +GT +   L A+  LE+ G
Sbjct: 474 SFRYPRGEGIGIDLP--QRGELLEIGKGRVLREGNRIALVCFGTRMSEVLQAADALEAEG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+  LA+ HEVL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K 
Sbjct: 532 LSTTVADARFAKPLDKDLMCRLAREHEVLVTIEEGAIGGFGAHILQFLAQEGLLEHGLKA 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L LPD Y++HG+P   L++ GL    I  TVF  LG+
Sbjct: 592 RTLKLPDEYLNHGAPEKVLSRIGLDAMGIVNTVFAALGR 630


>gi|428185733|gb|EKX54585.1| 1-deoxy-D-xylulose 5-phosphate synthase [Guillardia theta CCMP2712]
          Length = 756

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/675 (57%), Positives = 485/675 (71%), Gaps = 31/675 (4%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P P+LD++N+P  MK LS+ ELKQLA ELR +VI +VSKTGGHL SSLGV ELTVALHYV
Sbjct: 73  PKPVLDSVNFPSDMKKLSMAELKQLAYELRWEVIESVSKTGGHLSSSLGVTELTVALHYV 132

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           FNAP+DRI+WDV HQ YPHK+LTGRR +  T+RQ  GLSGFTKR ESE+DCFG GHSSTS
Sbjct: 133 FNAPEDRIVWDVAHQCYPHKMLTGRRSRFSTLRQWGGLSGFTKRKESEFDCFGAGHSSTS 192

Query: 193 ISAGLGMAVGRDLKGRK-NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           ISA LGM+V +DL G+  NN +AVIGDGA+T G AYEAMN AGYL+  MIVILN+N QVS
Sbjct: 193 ISAALGMSVAKDLTGKPVNNCIAVIGDGAITGGMAYEAMNCAGYLNQRMIVILNENGQVS 252

Query: 252 LPTATLDGP-IPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           LPT T     + P GALS + SR+ S+RP ++ R VAK +TK +   + ++  K+DE+ R
Sbjct: 253 LPTGTPSAAGVVPAGALSGSTSRILSSRPFQDARSVAKTLTKLLPEDLQKITRKIDEFGR 312

Query: 311 GMISGS-GSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           G +SG  G+ LFEELG YY+GP+DGH++++L+ ILE ++++++  PVL+HV TEKG GY 
Sbjct: 313 GFVSGEEGAVLFEELGFYYLGPIDGHDLENLIPILENLRDSESKKPVLLHVKTEKGYGYL 372

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            A KA+DK HGVA+FD ATGKQ K  +   SYT+ FA+ L+  A  D  V  I AAM GG
Sbjct: 373 PALKASDKMHGVAQFDIATGKQKKPKSGPPSYTSVFADTLVELARQDPTVCGITAAMPGG 432

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F + FP R FDVGIAEQHAVTFAAG+A +GLKPFCAIYS+F+QR YDQV+HD  +
Sbjct: 433 TGLDKFGKIFPKRTFDVGIAEQHAVTFAAGMAVDGLKPFCAIYSTFLQRGYDQVIHDCII 492

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPVRF +DRAGLVG DGPTH G FD+ ++  LPN+V+MAP+DE EL  MV TA AIDD
Sbjct: 493 QSLPVRFMVDRAGLVGNDGPTHHGCFDLAYLGTLPNIVIMAPADEIELMRMVKTAHAIDD 552

Query: 550 RPSCFRYPRGNGIGVE--------------LPPGNKGIPLEVGKGRILIEGE-----RVA 590
           +PS  RYPRGNG G E              LP     +P  VG+GR++   +     +VA
Sbjct: 553 KPSVVRYPRGNGFGAEGLNKLFGYNLKSTPLPSEVSALP--VGEGRMIRRADPEAKTKVA 610

Query: 591 LLGYGTAVQSCLAASAL----LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 646
           +L  GT +  C A  AL     E NG+ +T+ADAR+ KPLD  LIRSL + H+VLITVEE
Sbjct: 611 ILSLGTRL--CEAVRALRMIQQEGNGIGVTIADARYMKPLDKELIRSLVEEHDVLITVEE 668

Query: 647 GSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           G++GGFG HV  FL  +GLLD G  + R +VLPD++++ G    Q   AGL   HIAAT 
Sbjct: 669 GAVGGFGDHVNHFLTNEGLLDSGKCRLRVMVLPDQFVEAGGQKQQYDFAGLQAKHIAATA 728

Query: 706 FNILGQTREALEIMS 720
           F  L +  EALE+++
Sbjct: 729 FRALDRQGEALEVLA 743


>gi|423711167|ref|ZP_17685487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           Sb944nv]
 gi|395415081|gb|EJF81516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           Sb944nv]
          Length = 640

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/642 (59%), Positives = 472/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           +P TPLLD I  P  ++ L   +L QLADELRA+ I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   KPITPLLDCIRLPQDLRALPQSDLVQLADELRAETIDAVSITGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRR+++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRNRIRTLRQDGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LK   + N++AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAVASALKAEERRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K +++++     + A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPSYRNLRERVKILSEKLPKFFLDKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFDELGFYYVGPIDGHNLGHLLPVLKNVREYPD-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ +   SYT  F++ALI EA  D  +V+I AAM  G
Sbjct: 291 PAEASSDKYHGVNRFDIVTGKQIKTQSNALSYTKVFSKALIEEASHDDKIVSITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDSFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEIELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGR+L EG R+AL+ +G  +   L A+  L 
Sbjct: 471 GPISFRYPRGEGVGMDLP--QRGEVLEIGKGRVLREGNRIALVCFGARMTEVLVAADELR 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAMGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HGSP   L++ GL    I  TVF  LG+
Sbjct: 589 LKVRTLKFPDEYLNHGSPKTVLSRIGLDALGIINTVFTALGR 630


>gi|114569400|ref|YP_756080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
 gi|122316501|sp|Q0ARE5.1|DXS_MARMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114339862|gb|ABI65142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
          Length = 643

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/643 (59%), Positives = 466/643 (72%), Gaps = 16/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S  P TP+LDT+N P  +KNL +  LK LADE+RA+ I  VS TGGHLG+ LGV+ELT A
Sbjct: 2   SMTPKTPILDTVNSPADLKNLPLDRLKSLADEVRAETIDAVSVTGGHLGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF+ P D ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  LHHVFDTPTDTLIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           +STSISA LG AVGRDLK    NV+AVIGDG+M+AG AYEAMNNAG++   +IVILNDN 
Sbjct: 122 ASTSISAALGFAVGRDLKDENRNVIAVIGDGSMSAGMAYEAMNNAGHIGGRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S   +RL S++  R +R++ KGV K +   + E A + +EY
Sbjct: 181 DMSIA--------PPVGAMSHYFARLVSSQRYRSIRKLGKGVAKAL--RVEEAARRAEEY 230

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            RGM    G TLFEE+G  Y+GP+DGH++D LV +L  V++    GPVLIHVVT+KG+GY
Sbjct: 231 MRGM--AMGGTLFEEMGFRYVGPIDGHDLDQLVPVLRNVRDGDN-GPVLIHVVTQKGKGY 287

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE + DKYHGVAKF+  TG+Q KS A   SYT  FA+ LI EAE D  VV + AAM G
Sbjct: 288 APAEASDDKYHGVAKFNVITGEQQKSKAAAPSYTKVFAQQLIREAEADSRVVGVTAAMPG 347

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+LF  RFP R FDVGIAEQHAVTFAAGLA +G+KPF AIYS+F+QR YDQVVHDV 
Sbjct: 348 GTGLDLFGERFPDRMFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVA 407

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +QKLPVRFA+DRAGLVGADG TH GSFD+ ++  LP MV+MA +DE EL  MV TAA ID
Sbjct: 408 IQKLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVLMAAADELELSRMVKTAALID 467

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D PS FRYPRGNG G+E+P  ++  PLE+GKGRI+ EG R+A+L  GT ++  L A+  L
Sbjct: 468 DGPSAFRYPRGNGTGIEIP--DQIEPLEIGKGRIVREGSRIAILSLGTRLEESLKAADAL 525

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G   TVADARF KPLD  LI  LA+ HEVLITVEEG++GGFG+ V+  LA  G LD 
Sbjct: 526 AAQGFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDR 585

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            ++ R L LPD + D  +P D    AGL   HIAA     +G+
Sbjct: 586 GLRIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGK 628


>gi|49475232|ref|YP_033273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella henselae str.
           Houston-1]
 gi|81648131|sp|Q6G4D1.1|DXS_BARHE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|49238037|emb|CAF27244.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella henselae str.
           Houston-1]
          Length = 640

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/642 (59%), Positives = 470/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           R  TPLLD +  P  ++     +L +LADELRA+ I  VS TGGHLG+ LGVIELTVALH
Sbjct: 3   RTLTPLLDRVCEPQDLRAFPESDLARLADELRAETIDVVSVTGGHLGAGLGVIELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P+DRI+WDVGHQ YPHKILTGRR+K+ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPEDRIIWDVGHQAYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKN-NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LK  K  N+VAVIGDGAM+AG AYEAMNNAG L++ +IV+LNDN  
Sbjct: 123 TSISAGLGMAVASALKAEKRRNIVAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K + +++     + A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPAYRSLRERVKVLGEKLPKFFLDKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLFEELG YY+GP+DGHN+  L+ +L+ V+   T GPVLIHVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFEELGFYYVGPIDGHNLKHLLPVLKNVREYPT-GPVLIHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE + DKYHGV +FD  TGKQ K+S+    YT  F++AL  EA  D  +VAI AAM  G
Sbjct: 291 PAEASLDKYHGVNRFDIITGKQVKASSNVLPYTKVFSKALREEASYDDKIVAITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDFFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG GIG++LP   +G  LE+GKGRIL EG R+AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGEGIGMDLP--QRGEILEIGKGRILHEGNRIALVCFGTRISEVLVAADELS 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG+IGGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L LPD Y++HGS    L++ GL    I  TVF+ LG+
Sbjct: 589 LKVRTLKLPDEYLNHGSQEKVLSRIGLDAVGIVNTVFSALGR 630


>gi|223943853|gb|ACN26010.1| unknown [Zea mays]
 gi|413945324|gb|AFW77973.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
          Length = 413

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/409 (87%), Positives = 384/409 (93%)

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           MISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPVLIHVVTEKGRGYPYA
Sbjct: 1   MISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYA 60

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  +VAIHAAMGGGTG
Sbjct: 61  ERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTG 120

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           LN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQVVHDVDLQK
Sbjct: 121 LNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQK 180

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAEL HMVATAAAIDDRP
Sbjct: 181 LPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRP 240

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           SCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+AVQ CL A++L++ +
Sbjct: 241 SCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRH 300

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV QF+A DGLLDG +K
Sbjct: 301 GLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLK 360

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           WRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL IM+
Sbjct: 361 WRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 409


>gi|395766960|ref|ZP_10447498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
           12862]
 gi|395415572|gb|EJF82006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
           12862]
          Length = 640

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/642 (59%), Positives = 466/642 (72%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           R  TPLLD I +P  ++ L   +L QLADELR + I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RTLTPLLDCICFPQDLRALPESDLVQLADELRVETIDAVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P+DRI+WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEDGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LK   + NV+AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAVASALKAEMRRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K  ++++     + A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPSYRNLRERVKMFSEKLPKFFLDKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R    G   TLF+ELG YY+GP+DGHN++ L+ +L+ V+     GPVL+H+VT KG+GY 
Sbjct: 234 RSFFVGG--TLFDELGFYYVGPIDGHNLNHLLPVLKNVREYPN-GPVLVHIVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV  FD  TGKQ K  +   SYT  F++ALI EA  D  +V I AAM  G
Sbjct: 291 PAEASSDKYHGVNSFDIVTGKQIKIQSNALSYTKVFSKALIEEASHDDKIVGITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDSFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG GIG++LP   +G  LE+GKGR+L EG R+AL+ +GT +   L+A+  L 
Sbjct: 471 GPISFRYPRGEGIGLDLP--QRGELLEIGKGRVLREGNRIALICFGTRMSEVLSAADALV 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
             GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG+IGGFG+H++QF  Q+GLL+  
Sbjct: 529 VEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFFVQEGLLERG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L LPD Y++HGSP   LA+ GL    I  TV   LG+
Sbjct: 589 LKVRTLKLPDEYLNHGSPEKVLARVGLDAVGIVNTVLTALGR 630


>gi|409436325|ref|ZP_11263509.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
           FAD-requiring [Rhizobium mesoamericanum STM3625]
 gi|408751882|emb|CCM74661.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
           FAD-requiring [Rhizobium mesoamericanum STM3625]
          Length = 640

 Score =  751 bits (1939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/643 (58%), Positives = 471/643 (73%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD ++YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQPPKTPLLDKVSYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFNTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  +L      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVASELDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNVDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ + L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NANGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K      SYT+ FAEAL+ EAE+D  +V I AAM  
Sbjct: 290 APAEAAADKYHGVNKFDVITGAQAKVKPNAPSYTSVFAEALVQEAELDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLASVFPSRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD TF+A LP  VVMA +DEAEL HMV TAAA D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+G+E+P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGIEMP--VRGEILQIGKGRIVKEGAKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE+LITVEEG++GGFGS V+QFLA DGLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEILITVEEGAVGGFGSQVMQFLATDGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF +LG+
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEVMNAHAGLDRAGIVSTVFKVLGR 630


>gi|372281821|ref|ZP_09517857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola sp. S124]
          Length = 641

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/649 (59%), Positives = 468/649 (72%), Gaps = 18/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +  P  MK LS  ELK+LA+ELRA+ I  VS+TGGHLG+ LGVIELTVA
Sbjct: 2   TSRPETPLLDRVVTPADMKGLSDAELKRLANELRAETISAVSETGGHLGAGLGVIELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH +F AP+D+I+WDV HQ+YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG  H
Sbjct: 62  LHAIFEAPRDKIIWDVSHQSYPHKILTGRRDRIRTLRQKGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G+      + +AVIGDGAM+AG A+EAMNNAG+L   MIVIL
Sbjct: 122 SSTSISAALGFAVARDLGGQLPEGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRMIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALS+ LSRL +  P    +E AKG    +  P  E A +
Sbjct: 182 NDN-EMSI--------APPVGALSNYLSRLYAGDPFHSFKEAAKGAVSLLPPPFQEGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +G+    G TLFEELG  Y+GP+DGH++  L+ +L  VK  + TGPVLIHVVT+K
Sbjct: 233 AKEMLKGI--AVGGTLFEELGFSYLGPLDGHDMGQLLPVLRTVK-ARATGPVLIHVVTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A+D+ H  AKFD  +GKQ K+ +   SYT+ F E L+  A  D  + A+ A
Sbjct: 290 GKGYAPAETASDRGHATAKFDVPSGKQKKAPSNAPSYTSVFGEELVRLAAEDSRICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL L  +RFP+RCFDVGIAEQH VTFAAGLA  G++PFCAIYS+F+QR YDQVV
Sbjct: 350 AMPDGTGLQLMDQRFPSRCFDVGIAEQHGVTFAAGLAAGGMRPFCAIYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFDV FMA LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFMANLPGMVVMAAADEAELKHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D+ P  FRYPRG G+GVE+P   KG  LE+GKGR++ EG RVALL +G  ++  L A
Sbjct: 470 AAHDEGPIAFRYPRGEGVGVEMP--EKGQVLEIGKGRMIREGGRVALLSFGARLKEVLDA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L++ G+  TVADARF KPLD  +I  LA  HE LIT+EEG+IGGFGSHV Q LA +G
Sbjct: 528 AEALQARGITPTVADARFAKPLDREMILKLAADHEALITIEEGAIGGFGSHVAQLLADEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           + D  +K+R +VLPD +ID  SPAD  A AG+    I A V ++LG  R
Sbjct: 588 VFDKGLKFRSMVLPDIFIDQSSPADMYATAGMNAEDIEAKVLDVLGVER 636


>gi|451940393|ref|YP_007461031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
           Aust/NH1]
 gi|451899780|gb|AGF74243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
           Aust/NH1]
          Length = 635

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/642 (58%), Positives = 474/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD +  P  ++ L+  +L +LADELR++ I  VS TGGHLG+ LGVIELT+ALH
Sbjct: 3   RPLTPLLDRVRLPQDLRTLAESDLARLADELRSETIDVVSATGGHLGAGLGVIELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPNDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMAV   LKG  + N+++VIGDGAM+AG AYEAMNNAG L++ +IVILNDN  
Sbjct: 123 TSISAGLGMAVASALKGEGRRNIISVIGDGAMSAGMAYEAMNNAGALNARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+ L S    R  RE  K + K++     E A + +E A
Sbjct: 182 MSIA--------PPTGAMSAYLACLVSRPSYRHFRERVKILNKKLPKFFSEKARRSEELA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ LG YY+GP+DGHN+  L+ +L+ V+     GPVL+H+VT KG+GY 
Sbjct: 234 RGFLVGG--TLFDALGFYYVGPIDGHNLGHLLPVLKNVREYPN-GPVLVHIVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++ +YHGV++FD  TGKQ K+ +    YT  F++ALI EA  D  +VA+ AAM  G
Sbjct: 291 PAEASSHRYHGVSRFDVITGKQIKARSNCLPYTKVFSKALIEEASYDDKIVAVTAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL++F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QR+YDQ++HDV +
Sbjct: 351 TGLDVFAEKFPGRMFDVGIAEQHAVTFAAGVACEGYKPFVAIYSTFLQRSYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADGPTH GSFD+ F+A LP+ +VMAPSDE EL HMV TAA  D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGPTHAGSFDIIFLAALPDFIVMAPSDEVELMHMVRTAADYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G G+ LP   +G  LE+GKGR+L EG RVAL+ +GT +   L+A+  LE
Sbjct: 471 GPISFRYPRGEGTGIVLP--QRGELLEIGKGRVLCEGSRVALVCFGTRLSEVLSAAEELE 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKNLMRRLAREHEVLVTIEEGAVGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD+Y++HGSP   L+  GL  + I  TVF+ LG+
Sbjct: 589 LKVRTLKFPDKYLNHGSPEKVLSLIGLDAAGIIKTVFSALGR 630


>gi|334139802|ref|YP_004533000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
 gi|333937824|emb|CCA91182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
          Length = 640

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/638 (59%), Positives = 466/638 (73%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P+ ++ L   +L+QLADELR ++I  V +TGGHLGS LGV+ELTVALHY
Sbjct: 5   PATPLLDTVDTPVDLRKLKPAQLRQLADELREEMISAVGQTGGHLGSGLGVVELTVALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FGT HSST
Sbjct: 65  VFNTPEDRLVWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A+   L  +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 125 SISAALGFAIANKLSNQPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L++L S+RP   +R+ A+ V++++   +H  A K DE+ARG
Sbjct: 184 I--------APPVGGLSAYLAQLVSSRPFLNIRDFARKVSRRLPEALHRAAKKTDEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEELG YY+GPVDGHN++ L+ ILE V++    GP+LIHVVT+KG+GY  A
Sbjct: 236 M--AMGGTLFEELGFYYVGPVDGHNLEQLIPILENVRDA-AEGPILIHVVTKKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+AADKYHGV KF+  TG+Q K+ A   SYT  FA+ALIAEA+ D  V AI AAM  GTG
Sbjct: 293 EEAADKYHGVQKFNVVTGEQAKAPAGPPSYTGVFAKALIAEAKGDPRVCAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F  +FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRA+DQVVHDV +Q 
Sbjct: 353 LDKFASQFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV TAA  D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNFVVMAAADEAELVHMVHTAAQHDSGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG GV LP   K   LE+GKGRI+ EG +VALL  GT +   L A+  LE+ 
Sbjct: 473 IAFRYPRGNGTGVALP--EKPEVLEIGKGRIVREGTKVALLSLGTRLGEALKAADTLEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  SHEV++TVEEGSIGG G+HV+   + +GL D  ++
Sbjct: 531 GLSTTVADLRFAKPLDSELIRKLMLSHEVVVTVEEGSIGGLGAHVLTMASDEGLTDNGLR 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + DH  P  Q  +AGL    I  TV   L
Sbjct: 591 IRTMRLPDVFQDHDKPEAQYDEAGLNAPQIVDTVLKAL 628


>gi|374639397|gb|AEZ55687.1| putative 1-deoxy-D-xylulose 5-phosphate synthase precursor [Salvia
           miltiorrhiza]
          Length = 713

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/647 (57%), Positives = 480/647 (74%), Gaps = 9/647 (1%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP+LD ++ P+++KNLS++ELKQLAD++R ++   +SKT      SL V+EL VA+H+VF
Sbjct: 74  TPILDMVDNPMNLKNLSLKELKQLADDIRTELSI-MSKTNKSFRPSLSVVELAVAIHHVF 132

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +AP D+ILWD+  QTYPHK+LTGRR  ++   Q D LS +  R+E  YD FG GH  +SI
Sbjct: 133 HAPVDKILWDMEDQTYPHKLLTGRRACLNKSGQVDDLSSYACRNE--YDPFGAGHGCSSI 190

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           S+GLGMAV RD+KG+++ +V+VI +    AGQ YEAM+NAGYLDS+M+VILND    S P
Sbjct: 191 SSGLGMAVARDIKGKRDRIVSVISNETTMAGQVYEAMSNAGYLDSNMVVILNDRHHSSNP 250

Query: 254 TATLD-GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
              LD  P   + A+SS LS+LQS++  R+ REVAK +TK+IG  MHE AAK+DEYARGM
Sbjct: 251 K--LDQAPKASINAVSSTLSKLQSSQFFRKFREVAKVLTKRIGRGMHEWAAKIDEYARGM 308

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +   GSTLFEELGLYYIGPVDGHN++DL+ +L EV +  + GPVL+HVVT++   Y   +
Sbjct: 309 VGPPGSTLFEELGLYYIGPVDGHNIEDLLCVLHEVASLDSMGPVLVHVVTKEE--YAVED 366

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
               K        P T +     +R Q+Y+ +FA+ALI EAE+D+D+V +HA MG  T  
Sbjct: 367 NQMGKVSEECVEGPFTIEAAPIRSRPQTYSDHFAKALITEAEIDEDIVVVHAGMGMETSF 426

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
                +   R FDVG+AEQHAVTF+AGLAC GLKPFC I +SF+QRAYDQVVHDVD QK+
Sbjct: 427 RALKDKLRDRFFDVGMAEQHAVTFSAGLACGGLKPFCIIPASFLQRAYDQVVHDVDRQKI 486

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRF +  AGLVG+DG TH G+FD+TFM+CLPNM+VMAPSDE EL  MV+TAA I+DRP 
Sbjct: 487 PVRFVLTSAGLVGSDGATHSGAFDITFMSCLPNMIVMAPSDEIELARMVSTAADIEDRPV 546

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
           CFRYPRG  I    P  +   P+EVG+GR+L+EG+ +ALLG+G+ VQ+CL A A+L + G
Sbjct: 547 CFRYPRG-AIASMDPNLHLREPIEVGRGRLLVEGKDIALLGFGSMVQNCLRAHAILSNMG 605

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           + +TVADARFCKPLD  L+R L K+H+ LITVEEGSIGGFG+HV QF++ DGLLD  +KW
Sbjct: 606 IDVTVADARFCKPLDIKLVRMLCKNHKFLITVEEGSIGGFGAHVAQFISLDGLLDAGIKW 665

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           RP+ LPD YI+   P DQLA AGLT +HIAAT  N+LG+TR+AL +M
Sbjct: 666 RPITLPDNYIEGAQPNDQLAAAGLTGNHIAATALNLLGRTRDALLLM 712


>gi|83942135|ref|ZP_00954597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
 gi|83847955|gb|EAP85830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
          Length = 646

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/646 (57%), Positives = 467/646 (72%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +N P  +KN S  EL +L+ ELRA+ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 6   TDRPDTPLLDRVNRPADLKNFSDAELVKLSHELRAETISAVSETGGHLGAGLGVVELTVA 65

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ PKD+++WDV HQ YPHKILT RRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 66  IHSVFDTPKDKLIWDVSHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 125

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G       + +AVIGDG+M+AG AYEAMNNAG+L   M VIL
Sbjct: 126 SSTSISAALGFSVARDLGGNVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMFVIL 185

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGA+S+ LSRL +  P ++ +  AKG    + GP  E A +
Sbjct: 186 NDN-EMSIA--------PPVGAMSTYLSRLYAEEPFQDFKAAAKGAVSMLPGPFREGAKR 236

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE+LG  Y+GP+DGH+++ L+ +L  VK  + TGPVLIHV+T+K
Sbjct: 237 AKDMLKGM--AVGGTLFEQLGFSYLGPIDGHDLNQLLPVLRTVK-ARATGPVLIHVITKK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKF+  TG+Q K+ +   SYT  FA++LIAEA  D  + A+ A
Sbjct: 294 GKGYGPAEAARDKGHATAKFNVLTGEQKKAPSNAPSYTRVFADSLIAEAAKDDKICAVTA 353

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDVGIAEQH VTF+AGLA  G+KPFC +YS+F+QR YDQVV
Sbjct: 354 AMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAGLAAGGMKPFCTMYSTFLQRGYDQVV 413

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FDV F+A LP+ VVMA +DEAEL HMVATA
Sbjct: 414 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAFLANLPDFVVMAAADEAELVHMVATA 473

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FR+PRG G GV +P   +G PLE+GKGRI+ EG+RVALL +GT +     A
Sbjct: 474 AAYDDGPIAFRFPRGEGAGVTMP--ERGEPLEIGKGRIIAEGKRVALLSFGTRLSEVEKA 531

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  +I SLA  HE LIT+EEG++GGFGSHV Q LA +G
Sbjct: 532 AEALRAKGITPTIADARFAKPLDREMILSLAADHEALITIEEGAVGGFGSHVAQLLADEG 591

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SPAD  A AG+   HI A V ++LG
Sbjct: 592 VFDAGLKYRSMVLPDIFIDQASPADMYAVAGMNAEHIEAKVLDVLG 637


>gi|359399199|ref|ZP_09192204.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           pentaromativorans US6-1]
 gi|357599405|gb|EHJ61118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           pentaromativorans US6-1]
          Length = 640

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/638 (59%), Positives = 466/638 (73%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P+ ++ L   +L+QLADELR ++I  V +TGGHLGS LGV+ELTVALHY
Sbjct: 5   PATPLLDTVDTPVDLRKLKPAQLRQLADELREEMISAVGQTGGHLGSGLGVVELTVALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FGT HSST
Sbjct: 65  VFNTPEDRLVWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A+   L  +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 125 SISAALGFAIANKLSNQPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L++L S+RP   +R+ A+ V++++   +H  A K DE+ARG
Sbjct: 184 I--------APPVGGLSAYLAQLVSSRPFLNIRDFARKVSRRLPEALHRAAKKTDEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEELG YY+GPVDGHN++ L+ ILE V++    GP+LIHVVT+KG+GY  A
Sbjct: 236 M--AMGGTLFEELGFYYVGPVDGHNLEQLIPILENVRDA-AEGPILIHVVTKKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+AADKYHGV KF+  TG+Q K+ A   SYT  FA+ALIAEA+ D  V AI AAM  GTG
Sbjct: 293 EEAADKYHGVQKFNVVTGEQAKAPAGPPSYTGVFAKALIAEAKGDPRVCAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F  +FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRA+DQVVHDV +Q 
Sbjct: 353 LDKFASQFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV TAA  D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNFVVMAAADEAELVHMVHTAAQHDSGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG GV LP   K   LE+GKGRI+ EG +VALL  GT +   L A+  LE+ 
Sbjct: 473 IAFRYPRGNGTGVALP--EKPEVLEIGKGRIVREGTKVALLSLGTRLGEALKAADTLEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  SHEV++TVEEGSIGG G+HV+   + +GL D  ++
Sbjct: 531 GLSTTVADLRFAKPLDSDLIRKLMLSHEVVVTVEEGSIGGLGAHVLTMASDEGLTDNGLR 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + DH  P  Q  +AGL    I  TV   L
Sbjct: 591 IRTMRLPDVFQDHDKPEAQYDEAGLNAPQIVDTVLKAL 628


>gi|426401571|ref|YP_007020543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
           patella L2]
 gi|425858239|gb|AFX99275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
           patella L2]
          Length = 637

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/641 (58%), Positives = 470/641 (73%), Gaps = 14/641 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD I+ P  +K LS+ +L+Q+ADELRA+ I  VS TGGHLG+SLG++ELTVA
Sbjct: 2   SYRPDTPLLDVISTPDDLKELSVSQLRQVADELRAETISAVSITGGHLGASLGIVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF+ P D+++ DVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES+YD FG GH
Sbjct: 62  LHHVFDTPYDKVILDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESKYDSFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSIS+GLGM   RDL G+  +VV+VIGDGAM+AG AYEA+NNAG   S ++VILNDNK
Sbjct: 122 SSTSISSGLGMIAARDLLGKDFDVVSVIGDGAMSAGMAYEAINNAGASASSILVILNDNK 181

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+          PVGA+S+ LSR+ S+R    L E+ K +T+     +  +  +  ++
Sbjct: 182 -MSISQ--------PVGAMSAYLSRIVSSRSFSSLHELKKQLTQHFPRSLDLVTRQAKKF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           AR ++ G+  TLFE++G +YIGPVDGHN+D LV IL+++K +K  GPVL+H+VTEKGRG+
Sbjct: 233 ARDILRGN--TLFEKMGFFYIGPVDGHNIDHLVLILKKLKGSKH-GPVLLHIVTEKGRGH 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P+A+  A+KYH VAKF+P TGKQ K      SYT  FAE+LI  AEVD  +VAI AAM  
Sbjct: 290 PFAKNNAEKYHAVAKFNPITGKQVKPKLNAPSYTNVFAESLIQAAEVDDRIVAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLN F  RFP R FDVGIAEQHAVTFAAG+ACEG+KPF AIYS+F+QR YDQVVHDV 
Sbjct: 350 GTGLNKFAERFPKRSFDVGIAEQHAVTFAAGMACEGMKPFAAIYSTFLQRGYDQVVHDVM 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           L  LPVRFA+DRAGLVGADGP H G+FD+T++ CLPN ++MAPSDEAEL HM+ TA AID
Sbjct: 410 LHDLPVRFAIDRAGLVGADGPPHAGAFDLTYLGCLPNFIIMAPSDEAELKHMITTAVAID 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D PS  RYPRG  +GVELP    G  L++GKGRI+ EG  VA+L  GT +Q  ++A+  L
Sbjct: 470 DGPSAVRYPRGESVGVELP--EIGSVLQIGKGRIIREGTTVAILSLGTRLQEVVSAADAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ G+  TVADARF KP+D  L+  LAK H VLITVEE +IGGF + V+  LAQ  LLD 
Sbjct: 528 QARGISTTVADARFAKPIDGELVSRLAKEHAVLITVEENAIGGFATQVLHHLAQARLLDI 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +  R +VLPDR IDH S   Q   AGL    I  T    L
Sbjct: 588 GLVIRLMVLPDRTIDHDSQIAQYKDAGLDAESILNTALYAL 628


>gi|83953190|ref|ZP_00961912.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842158|gb|EAP81326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
           NAS-14.1]
          Length = 642

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/646 (57%), Positives = 467/646 (72%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +N P  +KN S  EL +L+ ELRA+ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPDTPLLDRVNRPADLKNFSDAELVKLSHELRAETISAVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ PKD+++WDV HQ YPHKILT RRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 62  IHSVFDTPKDKLIWDVSHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G       + +AVIGDG+M+AG AYEAMNNAG+L   M VIL
Sbjct: 122 SSTSISAALGFSVARDLGGNVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMFVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGA+S+ LSRL +  P ++ +  AKG    + GP  E A +
Sbjct: 182 NDN-EMSIA--------PPVGAMSTYLSRLYAEEPFQDFKAAAKGAVSMLPGPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE+LG  Y+GP+DGH+++ L+ +L  VK  + TGPVLIHV+T+K
Sbjct: 233 AKDMLKGM--AVGGTLFEQLGFSYLGPIDGHDLNQLLPVLRTVK-ARATGPVLIHVITKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKF+  TG+Q K+ +   SYT  FA++LIAEA  D  + A+ A
Sbjct: 290 GKGYGPAEAARDKGHATAKFNVLTGEQKKAPSNAPSYTRVFADSLIAEAAKDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDVGIAEQH VTF+AGLA  G+KPFC +YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAGLAAGGMKPFCTMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FDV F+A LP+ VVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAFLANLPDFVVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FR+PRG G GV +P   +G PLE+GKGRI+ EG+RVALL +GT +     A
Sbjct: 470 AAYDDGPIAFRFPRGEGAGVTMP--ERGEPLEIGKGRIIAEGKRVALLSFGTRLSEVEKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  +I SLA  HE LIT+EEG++GGFGSHV Q LA +G
Sbjct: 528 AEALRAKGITPTIADARFAKPLDREMILSLAADHEALITIEEGAVGGFGSHVAQLLADEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SPAD  A AG+   HI A V ++LG
Sbjct: 588 VFDAGLKYRSMVLPDIFIDQASPADMYAVAGMNAEHIEAKVLDVLG 633


>gi|49473998|ref|YP_032040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana str.
           Toulouse]
 gi|81647185|sp|Q6G0D4.1|DXS_BARQU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|49239501|emb|CAF25854.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella quintana str.
           Toulouse]
          Length = 640

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/642 (59%), Positives = 467/642 (72%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           R  TPLLD I  P  ++ L   +L +LADELR + I  VS TGGHLG+ LGV+ELTVALH
Sbjct: 3   RTLTPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P+DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKN-NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGM V   LK  K  N++AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMTVASALKAEKRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K  +K++     + A + +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPAYRSLRERIKMFSKKMPKFFLDKARRSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG + G   TLF+ELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGFLVGG--TLFDELGFYYVGPIDGHNLKHLLPVLKNVREYPN-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV  FD  TGKQ K+ +   +YT  F++ALI EA  D  +V I AAM  G
Sbjct: 291 PAEASSDKYHGVNSFDVVTGKQIKTQSNALAYTKVFSKALIEEATHDNKIVGITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQV+HDV +
Sbjct: 351 TGLDAFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQVIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGR+L EG RVAL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALI 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA  HEVL+ VEEG+IGGFG+H++QFLA++GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HGSP   L++ GL    I  TVF  LG+
Sbjct: 589 LKVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630


>gi|148554381|ref|YP_001261963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
           RW1]
 gi|166201541|sp|A5V6A9.1|DXS_SPHWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148499571|gb|ABQ67825.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
           RW1]
          Length = 639

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/649 (58%), Positives = 473/649 (72%), Gaps = 14/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RPPTPLLDT++ P  ++ L   +L+QLADELRA++I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   NDRPPTPLLDTVSTPEDLRRLKPADLRQLADELRAEMISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVF+ P+D ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  LHYVFDTPRDVLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV   L  ++   +AVIGDGAM+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAALGFAVANKLANKEGRAIAVIGDGAMSAGMAYEAMNNAKQAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGALS+ L+++ S+RP   +R  AK V +++  P+H+ A + +EY
Sbjct: 181 DMSIA--------PPVGALSAYLAKIVSSRPFLSMRGFAKRVAQKLPRPIHDFAKRSEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM   +G TLFEELG YY+GPVDGHN+D L+ ILE V++    GP+LIHVVT KG+GY
Sbjct: 233 ARGM--ATGGTLFEELGFYYVGPVDGHNLDHLLPILENVRDGDH-GPILIHVVTNKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  +G Q K+     SYT  FA+AL+AEA+ D  + AI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVVSGVQAKAPPGPPSYTGVFADALVAEAKRDDRICAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F + FP R FDVGIAEQHAVTFAAGLA +G +PFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKFGKAFPERSFDVGIAEQHAVTFAAGLAAQGYRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFD+T++A LPNMVVMA +DEAEL HMV TAA  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRGNG+GV LP   +   L +GKGRI+ EG+ VALL  GT +   L A+  L
Sbjct: 470 SGPIALRYPRGNGVGVALPAAPE--RLAIGKGRIVREGKTVALLSLGTRLGEALRAADQL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVAD RF KPLD A+I++L  SHEV +T+EEG+IGG G+HV+   +  GL+DG
Sbjct: 528 DALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDG 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            +K R + LPD + +H  P  Q A+AGL    I ATV   L +  + LE
Sbjct: 588 GLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGLE 636


>gi|262277462|ref|ZP_06055255.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB114]
 gi|262224565|gb|EEY75024.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB114]
          Length = 636

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/636 (56%), Positives = 460/636 (72%), Gaps = 13/636 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD INYP  +++   ++L  LA ELR ++I  VS TGGHLG+ LGV+ELT+A+HYVF
Sbjct: 4   TPLLDKINYPHDLRSFDKKDLTTLAKELREEMIDAVSVTGGHLGAGLGVVELTLAIHYVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + PKDR++WDVGHQ YPHKI+TGRRD++ T+RQ  GLSGFTKRSESEYD FGT HSSTSI
Sbjct: 64  DTPKDRLIWDVGHQAYPHKIITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGM+V RDL G+ NN+++VIGDGAM+AG AYEAMNNAG +DS +IVILNDN  +S+ 
Sbjct: 124 SAGLGMSVARDLDGKTNNIISVIGDGAMSAGMAYEAMNNAGSMDSRLIVILNDN-DMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS L++L S       RE  K ++ +    + +   + +EY RG+ 
Sbjct: 183 --------PPVGAMSSYLAKLLSGNKYIGFREFFKKLSNKFPKSLKKSIGQAEEYLRGL- 233

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEE+G +Y+G VDGHN D L+ +LE VKN+K  GP LIH +TEKG+GY  AE 
Sbjct: 234 -AVGGTLFEEMGFFYVGTVDGHNFDHLLPVLENVKNSKHEGPFLIHAITEKGKGYKPAED 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           + D+YHGV KF+  TG+Q KS +   SYT+ F E L   AE D  +V + AAM  GTG+N
Sbjct: 293 SKDRYHGVTKFNVETGEQSKSKSNIPSYTSVFGETLTKHAEKDSKIVTVTAAMPSGTGVN 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F  +FP R FDVGIAEQHAVTFAAGLA EG KP+ AIYS+F+QRAYDQVVHDV +QKLP
Sbjct: 353 IFQNKFPKRSFDVGIAEQHAVTFAAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQKLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH G+FD+T+++ LPN +VMA SDEAEL  M+ T+  I+D P  
Sbjct: 413 VRFAIDRAGLVGADGSTHAGAFDITYLSTLPNFIVMAASDEAELVRMINTSVEINDTPCA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRGNG+G+ELP  N+ I  E+GKGRI+ EG  V +L +GT ++ C  A+  L+S G+
Sbjct: 473 FRYPRGNGVGLELPDINETI--EIGKGRIIQEGSTVCILNFGTRLEECKIAAKQLDSKGI 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             T+ DARF KPLD  LI   A+ HE++IT+EEGSIGGFGSHV   L++ G  D  +K+R
Sbjct: 531 TTTIVDARFAKPLDQDLILRCAREHEMIITIEEGSIGGFGSHVSHLLSEKGFFDKGLKFR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            + LPD +ID  +P      AGL    IA  + N+ 
Sbjct: 591 SMTLPDIFIDQDTPEKMYDIAGLNAKQIAEKIENVF 626


>gi|83593951|ref|YP_427703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
 gi|118595487|sp|Q2RR29.1|DXS2_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|83576865|gb|ABC23416.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
          Length = 645

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/641 (59%), Positives = 462/641 (72%), Gaps = 12/641 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLDTI  P   + LS+ +L+QLA E+RA++I  VS TGGHLGS LGV+ELTVA
Sbjct: 2   TSRPITPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF+ P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT R ES YD FG GH
Sbjct: 62  LHHVFDTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+G  L G   +VVAVIGDG+M+AG AYEAMNNAG   S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ LSRL S++    +R +AK +  ++   +   A + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G G TLFEE+G YY+GP+DGH +D LV +L  V+     GPVLIHVVT+KG+GY
Sbjct: 233 ARGMVTGGG-TLFEEMGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGKGY 291

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV++F+  TG Q K+  +  SYT  F + L+A A  D  +VA+ AAM G
Sbjct: 292 APAENAPDKYHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPG 351

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     +P RCFDVGIAEQHAVTFAAGLACEGLKPF A+YSSF+QR YDQVVHDV 
Sbjct: 352 GTGLDKLAAAYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVV 411

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM  +DEAEL  MV TAA  D
Sbjct: 412 LQKLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHD 471

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRG G+GVE+P   +  PL +GKGRI+ EG+ VALL  GT +QSCL A  +L
Sbjct: 472 SGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEIL 529

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KP D  L+  LA  HEVLI VEEG+IGGF SHV  +LA  GLLDG
Sbjct: 530 AARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDG 589

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +K R L +PDR+ +H +P  Q A+AG+    I   V + L
Sbjct: 590 GLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630


>gi|83591394|ref|YP_425146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
 gi|118595483|sp|Q2RYD6.1|DXS1_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|83574308|gb|ABC20859.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
          Length = 645

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/641 (59%), Positives = 461/641 (71%), Gaps = 12/641 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLDTI  P   + LS+ +L+QLA E+RA++I  VS TGGHLGS LGV+ELTVA
Sbjct: 2   TSRPITPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF+ P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT R ES YD FG GH
Sbjct: 62  LHHVFDTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+G  L G   +VVAVIGDG+M+AG AYEAMNNAG   S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ LSRL S++    +R +AK +  ++   +   A + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G G TLFEELG YY+GP+DGH +D LV +L  V+     GPVLIHVVT+KG+GY
Sbjct: 233 ARGMVTGGG-TLFEELGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGKGY 291

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV++F+  TG Q K+  +  SYT  F + L+A A  D  +V + AAM G
Sbjct: 292 APAENAPDKYHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPG 351

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     +P RCFDVGIAEQHAVTFAAGLACEGLKPF A+YSSF+QR YDQVVHDV 
Sbjct: 352 GTGLDKLATAYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVV 411

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQKLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM  +DEAEL  MV TAA  D
Sbjct: 412 LQKLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHD 471

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRG G+GVE+P   +  PL +GKGRI+ EG+ VALL  GT +QSCL A  +L
Sbjct: 472 SGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEIL 529

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KP D  L+  LA  HEVLI VEEG+IGGFG+HV  +L   GLLDG
Sbjct: 530 AARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDG 589

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +K R L +PDR+ +H +P  Q A+AG+    I   V + L
Sbjct: 590 GLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630


>gi|182678782|ref|YP_001832928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|229813261|sp|B2IDK3.1|DXS_BEII9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|182634665|gb|ACB95439.1| deoxyxylulose-5-phosphate synthase [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 642

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/643 (60%), Positives = 477/643 (74%), Gaps = 14/643 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L   +L QLADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 7   TPLLDTIATPTDLRRLKESDLAQLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R+  GLSGFTKRSES YD FGT HSSTSI
Sbjct: 67  DTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRRAGGLSGFTKRSESVYDPFGTAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMA    L G  NNV+AVIGDG+M+AG AYEAMNNAG + S +I+ILNDN ++S+ 
Sbjct: 127 SAGLGMAAATTLSGGNNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIIILNDN-EMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALS+ L+RL S    R +RE AK + + +   +++ A K +E+AR   
Sbjct: 186 --------PPAGALSAYLARLVSGGTYRTVREAAKQLGRHLPHFIYDRARKTEEFARNFW 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T+FEELG+YY+GP+DGHN+D L+ +L+ V++ K TGP+L+HVVT+KG+GY  A  
Sbjct: 238 AGG--TMFEELGIYYVGPIDGHNLDHLLPVLKNVRDFKETGPILVHVVTQKGKGYAPAAA 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A+DKYH V  FD  TG Q K  A   SYT  FA+AL+ EAE D  +VAI AAM GGTGL+
Sbjct: 296 ASDKYHSVNTFDVVTGVQTKPKANAPSYTRVFADALVKEAERDDKIVAITAAMPGGTGLD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG +PFCA+YS+F+QR YDQVVHDV +Q LP
Sbjct: 356 VFGKAFPERTFDVGIAEQHAVTFAAGLATEGYRPFCALYSTFLQRGYDQVVHDVAIQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDV+++  LPNMV+MA +DEAEL HMVATAAA D+ P  
Sbjct: 416 VRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVIMAAADEAELVHMVATAAAYDEGPIA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+G+ELP    G  L++G+GRI+ EG  VALL  GT +     A+  L S G+
Sbjct: 476 FRYPRGEGVGIELP--QIGEILDIGRGRIVREGTTVALLSLGTRLAEASKAAEQLASYGI 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT-VKW 672
            +TVADARF KPLD  L+R LAK+HEVLIT+EEGS+GGFGS V+Q LA++GLLDGT +K+
Sbjct: 534 SVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKF 593

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           R +VLPD ++DH  P    AQAGL    I A V   LG+  EA
Sbjct: 594 RSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636


>gi|319406941|emb|CBI80578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. 1-1C]
          Length = 640

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/642 (59%), Positives = 469/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ L   +L QLA ELR + I  VS TGGHLG+ LGVIELT+ALH
Sbjct: 3   RPLTPLLDLIHLPQDLRALPESDLLQLAHELRTETIDAVSVTGGHLGAGLGVIELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMA+   L+   K N+++VIGDGA++AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAMVSALEAEEKRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDNDM 182

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
                       PP GA+S+ L+RL S    R LRE  K ++K++     E A   +E+A
Sbjct: 183 ---------SIAPPTGAMSAHLARLVSRPSYRSLRERVKILSKKLPKFFLEKARYSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R   +G   TLF+ELG YY+GP+DGHN   L+ +L+ V+     GPVL+HVVT KG+GYP
Sbjct: 234 RSFFAGG--TLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPD-GPVLVHVVTHKGKGYP 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ + + SYT  F++ALI EA+ D  +V I AAM  G
Sbjct: 291 PAEASSDKYHGVNRFDVITGKQVKAQSSSLSYTKVFSQALIEEAKHDNKIVGITAAMPNG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ+VHDV L
Sbjct: 351 TGLDSFSEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIVHDVSL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP+ VVMAPSDE EL HMV TAAA + 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPDFVVMAPSDEVELMHMVRTAAAYNQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGR+L EG ++AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGQGVGMDLP--QRGELLEIGKGRLLCEGSKIALVCFGTRLSEVLVAADELV 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVLIT+EEG+IGGFG+H++QF AQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLITIEEGAIGGFGAHLLQFFAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HG P   L+Q GL  + I   VF+ LG+
Sbjct: 589 LKVRTLKFPDEYLNHGLPDKVLSQIGLDATGIINAVFSALGR 630


>gi|319405367|emb|CBI78984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. AR 15-3]
          Length = 640

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/642 (58%), Positives = 472/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ L   +L QLA ELRA+ I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RPLTPLLDLIHLPQDLRVLPESDLPQLAHELRAETINAVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMA+   L+   + N+++VIGDGA++AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAIVSALEAEERRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+ +        P GA+S+ L+RL S    R LRE  K ++K++     E A   +E+A
Sbjct: 182 MSIAS--------PTGAMSAHLARLVSRPSYRNLRERIKILSKKLPKFFLEKARYSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R    G   TLF+ELG YY+GP+DGHN   L+ +L+ V+     GPVL+HVVT KG+GYP
Sbjct: 234 RSFFVGG--TLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPN-GPVLVHVVTHKGKGYP 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ + + SYT  F++ALI EA+ D  ++ I AAM  G
Sbjct: 291 PAEASSDKYHGVNRFDVITGKQVKAQSNSLSYTKVFSQALIEEAQHDNKIIGITAAMPNG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV L
Sbjct: 351 TGLDFFSEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+  LP+ VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPDFVVMAPSDELELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG GIG++LP   +G  LE+GKGR+L EG ++AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGEGIGMDLP--QRGEVLEIGKGRVLCEGSKIALVCFGTRLSEVLIAADELV 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAVGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HGS     +Q GL  + I  TVF+ LG+
Sbjct: 589 LKVRTLKFPDEYLNHGSLNKVFSQIGLDATGIINTVFSALGR 630


>gi|403530265|ref|YP_006664794.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
 gi|403232337|gb|AFR26080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
          Length = 636

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/639 (59%), Positives = 465/639 (72%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L   +L +LADELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 2   TPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 62  NTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKN-NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGM V   LK  K  N++AVIGDGAM+AG AYEAMNNAG LD+ +IVILNDN  +S+
Sbjct: 122 SAGLGMTVASALKAEKRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDN-DMSI 180

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S    R LRE  K  +K++     + A + +E+ARG 
Sbjct: 181 A--------PPTGAMSAHLARLVSRPAYRSLRERIKMFSKKMPKFFLDKARRSEEFARGF 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLF+ELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GY  AE
Sbjct: 233 LVGG--TLFDELGFYYVGPIDGHNLKHLLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAE 289

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            ++DKYHGV  FD  TGKQ K+     +YT  F++ALI EA  D  +V I AAM  GTGL
Sbjct: 290 ASSDKYHGVNSFDVVTGKQIKTQGNALAYTKVFSKALIEEATHDNKIVGITAAMPTGTGL 349

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 350 DAFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 409

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 410 PVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQGPI 469

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG G+G++LP   +G  LE+GKGR+L EG RVAL+ +GT +   L A+  L + G
Sbjct: 470 SFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEG 527

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+R LA  HEVL+ VEEG+IGGFG+H++QFLA++GLL+  +K 
Sbjct: 528 LSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKV 587

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L  PD Y++HGSP   L++ GL    I  TVF  LG+
Sbjct: 588 RTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 626


>gi|84500606|ref|ZP_00998855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
           HTCC2597]
 gi|84391559|gb|EAQ03891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
           HTCC2597]
          Length = 642

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/645 (58%), Positives = 467/645 (72%), Gaps = 18/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +  P  +   S  EL+Q+A ELRA+ I  VS+TGGHLG+ LGVIELTVA
Sbjct: 2   SDRPDTPLLDQVQEPGDLNKFSDAELRQVAHELRAETISAVSQTGGHLGAGLGVIELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH +++AP+DRI+WDV HQTYPHKILTGRRD++ T+RQ DGLSGFTKRSES YDCFG  H
Sbjct: 62  LHAIWDAPRDRIVWDVSHQTYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDCFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGAM+AG A+EAMNNAG L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGAPEHGIGDAIAVIGDGAMSAGMAFEAMNNAGSLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN  +S+         PPVGA S+ LSRL +  P +EL+  AKG+   +  P  E A +
Sbjct: 182 NDN-DMSI--------APPVGAFSNYLSRLYAEEPFQELKAAAKGMASLLPPPFQEGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFEELG  YIGP+DGH++  L+ IL  VK  +  GPVL+HVVT+K
Sbjct: 233 AKDMLKGM--AMGGTLFEELGFSYIGPIDGHDMSQLLPILRTVK-ARAAGPVLVHVVTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A+DK H  AKFD  +G+Q K+ +   SYT+ F + L+  A  D+ V A+ A
Sbjct: 290 GKGYGPAERASDKGHATAKFDVISGEQKKAPSNAPSYTSVFGKELVRLAGEDQRVCAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNL   R+P+R FDVGIAEQH VTFAAGLA  G++PFCAIYS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAGLAAGGMRPFCAIYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFDV+++  LP  VVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVSYLTNLPGFVVMAAADEAELMHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D+ P  FRYPRG G GV++P  +KG+PLE+GKGR++ +G RVA+L YGT ++  L A
Sbjct: 470 AAHDEGPIAFRYPRGEGAGVDMP--DKGVPLEIGKGRMIRDGSRVAILSYGTRLKEVLDA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              LE+ G+R TVADARF KPLD  L+ +LA  HE LIT+EEG++GGFGSHV Q LA +G
Sbjct: 528 CEALEARGIRPTVADARFAKPLDRDLVLNLAADHEALITIEEGAVGGFGSHVAQLLANEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           + D  +++R +VLPD +ID  SPAD  A AGL    I A V  +L
Sbjct: 588 VFDDGLRFRSMVLPDTFIDQASPADMYATAGLNAPDIEAKVLEVL 632


>gi|118595583|sp|Q5FUB1.2|DXS_GLUOX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 660

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/652 (58%), Positives = 472/652 (72%), Gaps = 30/652 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD + +P  M+NLS+ +LKQLADELR++ +  VS TGGHLG+SLGV+ELTVALH VFN
Sbjct: 15  PELDRVRFPADMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSSTSIS
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 195 AGLGMAVGRDLKGRKN------NVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+  ++      NV+AVIGDG+++AG AYEAMNNA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S  LSRL S+R    LR++A  V K++ G +   A + 
Sbjct: 195 DN-EMSI--------APPVGSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRA 245

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPV+GH++  LV IL  +++    GP+L+H++TEKG
Sbjct: 246 EEYARGMITGG--TLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKG 303

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH V+KF+  TG+Q K+ A   SYT+ F+  L+  A+ D  ++ I AA
Sbjct: 304 RGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSIFSRELMRRAKTDDKLITITAA 363

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGLN F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVH
Sbjct: 364 MPSGTGLNAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVH 423

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++ CLPNMVVMAPSDE EL H  ATA 
Sbjct: 424 DVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATAC 483

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER-------VALLGYGTAV 598
             D  P  FRYPRGNGIG++LP   KG  LE+GKGRI+ E  R       VA+L  G  +
Sbjct: 484 EYDAGPIAFRYPRGNGIGLDLP--EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRM 541

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
              L A+  L + G+ +TVADARF KP+D AL+  LA+ HEV IT+EEG+IGGF S VVQ
Sbjct: 542 HESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQ 601

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LA+ GLLD  VK+RP+ LPDRYIDH +   Q   AGLT  HI  T  + LG
Sbjct: 602 HLAETGLLD-KVKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 652


>gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
 gi|8953400|emb|CAB96673.1| 1-D-deoxyxylulose 5-phosphate synthase-like protein [Arabidopsis
           thaliana]
 gi|332004286|gb|AED91669.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
          Length = 700

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/668 (56%), Positives = 479/668 (71%), Gaps = 30/668 (4%)

Query: 57  VCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRAD---VIFNVSKTG 113
           VC SL     Y  ++  TP+LD+I  P+ +KNLS++ELK LADE+R +   V++   KT 
Sbjct: 59  VC-SLPNTDGYCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWK--KTQ 115

Query: 114 GHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGF 173
             +  S   IELT+ALHYVF AP D ILWD   QTY HK+LT R   + + RQ  G+SG 
Sbjct: 116 KSMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGV 174

Query: 174 TKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNA 233
           T R ESEYD FGTGH   SISAGLG+AV RD+KG+++ VVAVI +  +TAGQAYEAM+NA
Sbjct: 175 TSRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNA 234

Query: 234 GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ 293
           GYLDS+MIVILND++  SL     +G    + ALSS +S++QS++  R+ RE+AK +TK+
Sbjct: 235 GYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKR 293

Query: 294 IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT 353
           IG  M+E AAKVDEYARGM+  +GSTLFEELGLYYIGPVDGHN++DLV +L EV +  + 
Sbjct: 294 IGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSM 353

Query: 354 GPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEA 413
           GPVL+HV+TE  R                  D  T K      R ++Y+  F EAL+ EA
Sbjct: 354 GPVLVHVITEGNR------------------DAETVKNIMVKDR-RTYSDCFVEALVMEA 394

Query: 414 EVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYS 473
           E D+D+V +HA M     L  F  RFP R F+VG+AEQHAVTF+AGL+  GLKPFC I S
Sbjct: 395 EKDRDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPS 454

Query: 474 SFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSD 533
           +F+QRAYDQVVHDVD Q+  VRF +  AGLVG+DGP  CG+FD+ FM+ LPNM+ MAP+D
Sbjct: 455 AFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPAD 514

Query: 534 EAELFHMVATAAAIDDRPSCFRYPRGNGIGVE-LPPGNKGIPLEVGKGRILIEGERVALL 592
           E EL +MVATAA + DRP CFR+PRG+ + +  L P   G+P+E+G+GR+L+EG+ VALL
Sbjct: 515 EDELVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVP--TGLPIEIGRGRVLVEGQDVALL 572

Query: 593 GYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGF 652
           GYG  VQ+CL A +LL   GL +TVADARFCKPLD  L+R L ++H+ LITVEEG +GGF
Sbjct: 573 GYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITVEEGCVGGF 632

Query: 653 GSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           GSHV QF+A DG LDG +KWRP+VLPD YI+  SP +QLA AGLT  HIAAT  ++LG+T
Sbjct: 633 GSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAATALSLLGRT 692

Query: 713 REALEIMS 720
           REAL +MS
Sbjct: 693 REALLLMS 700


>gi|418936010|ref|ZP_13489753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
 gi|375057273|gb|EHS53454.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
          Length = 639

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/642 (58%), Positives = 466/642 (72%), Gaps = 14/642 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+  P  ++ +  R+L QLA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PDTPLLDTVKLPADLRTIDDRDLPQLARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKR+ESEYD FG  HSST
Sbjct: 65  VFNTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTKRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAADLSQTDRKVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R    +R++ K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGIRDIGKKLTAYLGKNIDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEE+G Y+IGP+DGH+ + L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TMFEEMGFYHIGPIDGHSFEHLLPVLRNVRDNQQ-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT  F +AL+ EA +D+ +V I AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGTQAKAKPNAPSYTAVFGDALVQEATLDEKIVGITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FPTR FDVGIAEQHAVTFAAGLA EG +PFCA+YS+F+QR YDQVVHDV +Q 
Sbjct: 353 LDKLQELFPTRTFDVGIAEQHAVTFAAGLASEGFRPFCALYSTFLQRGYDQVVHDVAIQG 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TAA+ DD P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAASYDDGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GV LP   +G  LE+GKGRI+ EG +VALL +GT +  CL A+  L++ 
Sbjct: 473 ISFRYPRGEGVGVALP--ERGEILEIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  +IR LA+ H VL+TVEEG++GGFGS VV  L  +GLLDG +K
Sbjct: 531 GLSTTVADARFAKPLDVDMIRRLAREHAVLVTVEEGAVGGFGSQVVHLLVNEGLLDGGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            R LVLPD ++D   P    A+AGL  + I  TVF  LG+T+
Sbjct: 591 MRSLVLPDYWMDQAKPEVMYAKAGLDAAGILQTVFAALGETQ 632


>gi|402490059|ref|ZP_10836850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
 gi|401811003|gb|EJT03374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
          Length = 638

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/643 (58%), Positives = 469/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  REL QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVIYPADLRKLEDRELPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHNVFNTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      VVAVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKSDRRVVAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R++ K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDLGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLADAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +G+ +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIIKEGTKVALLSFGSRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGS V+Q+L+ +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHELIRQLARHHEMVITVEEGSIGGFGSQVMQYLSSEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P   +A AGL  + I +TVF  LG+
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEAMIAHAGLDRAGIISTVFKALGR 630


>gi|58038727|ref|YP_190691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
           621H]
 gi|58001141|gb|AAW60035.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
           621H]
          Length = 669

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/652 (58%), Positives = 472/652 (72%), Gaps = 30/652 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD + +P  M+NLS+ +LKQLADELR++ +  VS TGGHLG+SLGV+ELTVALH VFN
Sbjct: 24  PELDRVRFPADMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 83

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSSTSIS
Sbjct: 84  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 143

Query: 195 AGLGMAVGRDLKGRKN------NVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+  ++      NV+AVIGDG+++AG AYEAMNNA   G   + +IV+LN
Sbjct: 144 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 203

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S  LSRL S+R    LR++A  V K++ G +   A + 
Sbjct: 204 DN-EMSI--------APPVGSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRA 254

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPV+GH++  LV IL  +++    GP+L+H++TEKG
Sbjct: 255 EEYARGMITGG--TLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKG 312

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH V+KF+  TG+Q K+ A   SYT+ F+  L+  A+ D  ++ I AA
Sbjct: 313 RGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSIFSRELMRRAKTDDKLITITAA 372

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGLN F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVH
Sbjct: 373 MPSGTGLNAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVH 432

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++ CLPNMVVMAPSDE EL H  ATA 
Sbjct: 433 DVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATAC 492

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER-------VALLGYGTAV 598
             D  P  FRYPRGNGIG++LP   KG  LE+GKGRI+ E  R       VA+L  G  +
Sbjct: 493 EYDAGPIAFRYPRGNGIGLDLP--EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRM 550

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
              L A+  L + G+ +TVADARF KP+D AL+  LA+ HEV IT+EEG+IGGF S VVQ
Sbjct: 551 HESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQ 610

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LA+ GLLD  VK+RP+ LPDRYIDH +   Q   AGLT  HI  T  + LG
Sbjct: 611 HLAETGLLD-KVKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 661


>gi|347526939|ref|YP_004833686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
 gi|345135620|dbj|BAK65229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
          Length = 645

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/647 (57%), Positives = 467/647 (72%), Gaps = 14/647 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           +P TPLLD +  P  ++ L+  +L+QLADELRA++I  V  TGGHLGS LGV+ELT A+H
Sbjct: 7   QPETPLLDQVRDPADLRKLAPGQLRQLADELRAEMISAVGVTGGHLGSGLGVVELTAAIH 66

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES+YD FG  HSS
Sbjct: 67  YVFNTPEDRLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESQYDPFGAAHSS 126

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LG A+   L GR    +AVIGDGAM+AG AYEAMNNA    + +IVILNDN  +
Sbjct: 127 TSISAALGFAIANRLTGRSGKAIAVIGDGAMSAGMAYEAMNNAREAGNRLIVILNDN-DM 185

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVG LS+ L+R+ S+R    +RE  K + +++  P+H  A K DE+AR
Sbjct: 186 SIA--------PPVGGLSAYLARIVSSREFLSVREALKKLARKLPRPLHHAARKTDEFAR 237

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM    G TLFEELG YY+GP+DGHN+D L+ +LE V++    GPVL+HVVT+KG+GY  
Sbjct: 238 GM--AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDM-ADGPVLVHVVTQKGKGYAP 294

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE AADKYHGV KF+  TG+Q K+ A   SYT  FA+AL+ EA+ D  VVAI AAM  GT
Sbjct: 295 AEAAADKYHGVQKFNVITGEQVKAPAGPPSYTNVFAQALMDEAQRDDRVVAITAAMPSGT 354

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+ F + FP RCFDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q
Sbjct: 355 GLDKFQKAFPARCFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQ 414

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFA+DRAGLVGADG TH GSFD+T++A LPNMVVMA +DEAEL HMV TAA  D+ 
Sbjct: 415 NLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAACHDES 474

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P   RYPRGNG+GV LP   +   L +GKGR+L EG+++A+L  GT ++  L A+  L++
Sbjct: 475 PIALRYPRGNGVGVALPATPE--RLAIGKGRLLREGKKIAILSLGTRLEEALKAADTLDA 532

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  +VAD RF KPLD ALIR L  +H+V +T+EEG+IGG G+HV+   + +GL+DG +
Sbjct: 533 RGLSTSVADLRFAKPLDEALIRRLLTTHDVAVTIEEGAIGGLGAHVLTLASDEGLIDGGL 592

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           + R + LPD + D   P  Q   A L   HI  TV   L      +E
Sbjct: 593 RLRTMRLPDIFQDQDKPEKQYDDARLNAPHIVETVLTALRHNSAGVE 639


>gi|319403927|emb|CBI77515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 640

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/642 (59%), Positives = 471/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ L   +L QLA ELR + I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RPLTPLLDLIHLPQDLRALPESDLLQLAHELRTETIDAVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMA+   L+   K N+++VIGDGA++AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAMVSALEAEEKRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+ +        P GA+S+ L+RL S    R LRE  + ++K++     E A   +E+A
Sbjct: 182 MSIAS--------PTGAMSAHLARLVSRPSYRSLRERVRILSKKLPKFFSEKARYSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R   +G   TLF+ELG YY+GP+DGHN   L+ +L+ V+     GPVL+HVVT KG+GYP
Sbjct: 234 RSFFAGG--TLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPD-GPVLVHVVTHKGKGYP 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV  FD  TGKQ K+ + + SYT  F++ALI EA  D  +V I AAM  G
Sbjct: 291 PAEASSDKYHGVNCFDVITGKQVKAQSSSLSYTKVFSQALIEEATHDNKIVGITAAMPNG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ+VHDV L
Sbjct: 351 TGLDSFSEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIVHDVSL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP+ VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPDFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGR+L EG ++AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGQGVGMDLP--QRGELLEIGKGRLLCEGSKIALVCFGTRLSEVLVAADELV 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVLIT+EEG+IGGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLITIEEGAIGGFGAHLLQFLAQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD Y++HG P   L+Q GL  + I   VF+ LG+
Sbjct: 589 LKVRTLKFPDEYLNHGLPDKVLSQIGLDATGIINAVFSALGR 630


>gi|154248651|ref|YP_001419609.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthobacter autotrophicus
           Py2]
 gi|229836094|sp|A7IPK6.1|DXS_XANP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|154162736|gb|ABS69952.1| deoxyxylulose-5-phosphate synthase [Xanthobacter autotrophicus Py2]
          Length = 643

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/649 (59%), Positives = 476/649 (73%), Gaps = 19/649 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI     ++ L   +L QLA ELRA+ I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 6   TPLLDTIRDAADVRRLPQDKLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 66  NTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL G + NVV VIGDGAM+AG AYEAMNNAG +DS +IVILNDN  +S+ 
Sbjct: 126 SAGLGMAVARDLSGEERNVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GA+S+ L+RL S +  R LRE+ K +   +   +   AA+ +E+ARG  
Sbjct: 185 --------PPTGAMSAYLARLISGQTYRSLREIGKQIAGHLPKFVERGAARAEEFARGFW 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG YY+GP+DGHN+D L+ +L+ V++ KT GP+L+HVVT+KG+GY  AE 
Sbjct: 237 TGG--TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDAKT-GPILVHVVTQKGKGYAPAEA 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV KFD  TG Q K+ +   SYT  FAE+LI++A  D  VVAI AAM  GTGL+
Sbjct: 294 SADKYHGVVKFDVVTGAQVKAKSNAPSYTRVFAESLISQARHDPKVVAITAAMPSGTGLD 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + +P R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QRAYDQVVHDV LQ LP
Sbjct: 354 LFGQVYPERTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRAYDQVVHDVALQGLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRF +DRAGLVGADG TH G+FD+ F+ACLP M VMAP+DEAEL HM+AT  A DD PS 
Sbjct: 414 VRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGPSA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILI---EGERVALLGYGTAVQSCLAASALLES 610
            R+PRG G+GVE P   +G  L +GKGRI+    EG+ +ALL  GT + +CL A+  LE+
Sbjct: 474 VRFPRGEGVGVERP--ERGEVLPIGKGRIVHGTGEGD-IALLSLGTRLAACLDAAERLEA 530

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GT 669
            G  +TVADARF KPLD  L+  LA  H  L+TVEEGS+GGFGSHV+Q +  +GLLD G 
Sbjct: 531 AGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGA 590

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           VK R +VLPD YID  + A QLA AGL    I A V  +LG+ +  + +
Sbjct: 591 VKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAKAGVSL 639


>gi|424873984|ref|ZP_18297646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae WSM1455]
 gi|393169685|gb|EJC69732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae WSM1455]
          Length = 638

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/643 (58%), Positives = 468/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD TF+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 GGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGSHV+ FLA +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKLRALVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|402825295|ref|ZP_10874597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
 gi|402261169|gb|EJU11230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
          Length = 640

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/638 (59%), Positives = 464/638 (72%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P  ++ L   +L+QLADELR ++I  V +TGGHLGS LGV+ELTVA+HY
Sbjct: 5   PATPLLDTVSTPDDLRRLKPAQLRQLADELRTEMISAVGQTGGHLGSGLGVVELTVAIHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FGT HSST
Sbjct: 65  VFDTPVDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGTAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A+G  +KG+    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 125 SISAALGFAMGSKIKGQPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L+RL S+     LRE+A+   +++  P+H  A K DE+ARG
Sbjct: 184 IA--------PPVGGLSAYLARLVSSGQFLGLRELARKFARKLPRPLHLAAKKTDEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEELG YY+GP+DGH++D LV +LE V++    GP+L+HVVT+KG+GY  A
Sbjct: 236 M--AMGGTLFEELGFYYVGPIDGHDLDALVPVLENVRDAGE-GPILVHVVTQKGKGYGPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG+Q K+ A   SYT  FA+AL+AEAE D  + AI AAM  GTG
Sbjct: 293 ESAADKYHGVQKFDVVTGEQAKAPAGPPSYTGTFAKALVAEAEKDATICAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F + FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRA+DQVVHDV +Q 
Sbjct: 353 LDKFAQMFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMA +DEAEL HMV TAA  D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAAADEAELVHMVHTAAQYDAGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG G  LP   +   LE+GKGRI+ EG +VALL  GT +   L A+  LE+ 
Sbjct: 473 IAFRYPRGNGTGAALPETPQ--LLEIGKGRIVREGTKVALLSLGTRLGEALKAADQLEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  SHEV++TVEEGSIGG G+HV+   + +GL D  +K
Sbjct: 531 GLSTTVADLRFAKPLDTDLIRRLMLSHEVVVTVEEGSIGGLGAHVLTMASDEGLTDAGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + DH  P  Q  +AGL    I  TV   L
Sbjct: 591 IRTMRLPDTFQDHDKPETQYDEAGLNAPQIVNTVLKAL 628


>gi|395792084|ref|ZP_10471523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis Pm136co]
 gi|423714132|ref|ZP_17688391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395421279|gb|EJF87535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395433003|gb|EJF98977.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis Pm136co]
          Length = 640

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/639 (59%), Positives = 468/639 (73%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  +++L   +L +LADELR + I  VS TGGHLG+ LGVIELTVALHYVF
Sbjct: 6   TPLLDRICVPHDLRSLPESDLVKLADELRTETIDAVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   LK   K N++AVIGDGAM+AG AYEAMNNAG L++ +IV+LNDN  +S+
Sbjct: 126 SAGLGMAVASALKAEEKRNIIAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S    R LRE  K + +++     + A   +E+ARG 
Sbjct: 185 A--------PPTGAMSAHLARLVSRPAYRSLRERIKVLGEKLPKFFLDKARLSEEFARGF 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLFEELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GY  AE
Sbjct: 237 LVGG--TLFEELGFYYVGPIDGHNLKHLLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            ++DKYHGV +F+  TG+Q K+ +    YT  F++ALI EA  D  +V I AAM  GTGL
Sbjct: 294 ASSDKYHGVNRFNIITGQQVKAQSSVLPYTKVFSKALIEEASHDDKIVGITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F ++FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 354 DAFAKKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDQGPL 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG G+G++LP   +G  LE+GKGR+L EG R+AL+ +GT +   L A+  L + G
Sbjct: 474 SFRYPRGEGVGMDLP--QRGELLEIGKGRVLCEGNRIALVCFGTRMSEVLVAAEELLAEG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+R LA+ HEVL+T+EEG+IGGFG+H++QFLAQ+GLLD  +K 
Sbjct: 532 LSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLDHGLKV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L LPD Y+ HGSP   L++ GL    I  TVF  LG+
Sbjct: 592 RTLKLPDEYLSHGSPEKVLSRVGLDAVGIINTVFTALGR 630


>gi|424880292|ref|ZP_18303924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WU95]
 gi|392516655|gb|EIW41387.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WU95]
          Length = 638

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/643 (58%), Positives = 467/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 GGPISFRYPRGEGVGVDMPA--RGEMLQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGSHV+ FLA +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEIVITVEEGSIGGFGSHVMHFLATEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|395787324|ref|ZP_10466925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
           LL-WM9]
 gi|395411748|gb|EJF78269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
           LL-WM9]
          Length = 638

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/642 (58%), Positives = 473/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           R  TPLLD I  P  ++ L   +L +LA+ELR + I  VS TGGHLG+ LGV+ELT+ALH
Sbjct: 3   RRLTPLLDRICLPHDLRALPESDLVRLANELRTETIDAVSVTGGHLGAGLGVVELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVF  P+DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFQTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGM+V   LK   K NV+A+IGDGAM+AG AYEAMNNAG L++ +IVILNDN  
Sbjct: 123 TSISAGLGMSVASALKAETKRNVIAIIGDGAMSAGMAYEAMNNAGALNARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LRE  K + +++     + A   +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPAYRSLRERVKLLGEKLPRFFLDKARLSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           RG++ G   TLFEELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RGLLVGG--TLFEELGFYYVGPIDGHNLKHLLPVLKNVREYPH-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ +R   YT  F++ALI EA  D  +V+I AAM  G
Sbjct: 291 PAEASSDKYHGVNRFDITTGKQVKTPSRALPYTKVFSKALIEEATHDDKIVSITAAMPTG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +
Sbjct: 351 TGLDAFAEKFPKRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH G+FD+ F+A LP  VVMAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGNFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G+G++LP   +G  LE+GKGR+L EG RVAL+ +GT +   L A+ +L 
Sbjct: 471 GPISFRYPRGEGVGIDLP--QRGELLEIGKGRLLREGNRVALVCFGTRMPEVLEAADVLG 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG++GGFG+H++QFLAQ+GLL+  
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAVGGFGAHLLQFLAQEGLLEQG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L LPD Y++HGSP   L++ GL  + I  TVF  LG+
Sbjct: 589 LKVRTLKLPDEYLNHGSPEKVLSRIGLDVTGIVNTVFTALGR 630


>gi|298715557|emb|CBJ28110.1| 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 795

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/695 (55%), Positives = 483/695 (69%), Gaps = 61/695 (8%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD+++ P  MK  +I ELKQLA ELR + +  VSKTGGHLGSSLGVIELTVALHYVF 
Sbjct: 91  PLLDSVHSPADMKRFTIAELKQLAYELRWETLEAVSKTGGHLGSSLGVIELTVALHYVFE 150

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
           AP+D+I WDV HQ YPHKILTGRRD+MH++RQ+ GLSGF KRSESE+DCFG GHSSTSIS
Sbjct: 151 APEDKITWDVSHQVYPHKILTGRRDRMHSLRQSGGLSGFAKRSESEFDCFGAGHSSTSIS 210

Query: 195 AGLGMAVGR-DLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           + +GM+VG+  L  R+NN VAVIGDGA+T G A+EAMN AGYL    +VILNDN QVSLP
Sbjct: 211 SAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLP 270

Query: 254 TATLD-GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           T T   G + P GALSS   RL S+R  + +R+VAK   K +   +  + AK+DEYARGM
Sbjct: 271 TGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGM 330

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +SG   TLFEELG YY+GPVDGH++ +LV ILE +++ K   PVL+H+ TEKG GYP A 
Sbjct: 331 MSGG--TLFEELGYYYVGPVDGHDLANLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAM 388

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            A+DKYHGVAKF+ ATGKQ K ++   S T+ FA  LI  A  D+ VV I AAM GGTG+
Sbjct: 389 AASDKYHGVAKFNVATGKQHKGTSANPSLTSVFANTLIDIATEDRSVVGITAAMPGGTGM 448

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           ++F RRFP R +DVGIAEQHAVTFAAG+A EGLKPFC +YS+FMQRAYDQV+HDV +QKL
Sbjct: 449 DMFGRRFPKRTYDVGIAEQHAVTFAAGMAVEGLKPFCCVYSTFMQRAYDQVMHDVVVQKL 508

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVR  +DRAGLVG DGPTH GSFD+T++  LP++V+MAPSDE EL +M+ TA AIDD+PS
Sbjct: 509 PVRMILDRAGLVGNDGPTHHGSFDLTYLGTLPHIVIMAPSDEIELMNMIQTAYAIDDKPS 568

Query: 553 CFRYPRGNGIGV------------ELPPGNKGIPLEVGKGRIL-----IEGERVALLGYG 595
             RYPRG G G+            E+P   KG  +E+GKGRI+        ++  +L  G
Sbjct: 569 VVRYPRGTGYGLEKLRSLFGYELDEMPA--KGEEVEIGKGRIVRRPRATARQKAVILSLG 626

Query: 596 TAVQSCLAASALLES-------------------------NG------------LRLTVA 618
           T +   L A+  LE                          NG            + +TVA
Sbjct: 627 TRLAPSLEAAIQLEDSFFLVGIGTPECPEGGGGGACGVEGNGGAEQSQAADNPDMGVTVA 686

Query: 619 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL-DGTVKWRPLVL 677
           DARF KPLD  LIR LA  H+ ++TVEE ++GGFG+HV+ F+  DGL+ DG +K RP+VL
Sbjct: 687 DARFMKPLDVDLIRRLAGEHDAMLTVEENAVGGFGAHVLHFMVLDGLVDDGNLKMRPMVL 746

Query: 678 PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           PD +I+ G+  +Q  +AGL+  HI A+V  +  QT
Sbjct: 747 PDTFIEAGTQTEQYEEAGLSAGHIRASVLRLFDQT 781


>gi|451941627|ref|YP_007462264.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451901014|gb|AGF75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 638

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/639 (59%), Positives = 468/639 (73%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L   +L +LADELR + I  VS TGGHLG+ LGVIELTVALHYVF
Sbjct: 6   TPLLDRICVPHDLRALPESDLVKLADELRTETIDAVSVTGGHLGAGLGVIELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   LK   K N++ VIGDGAM+AG AYEAMNNAG L++ +IV+LNDN  +S+
Sbjct: 126 SAGLGMAVVSALKAEEKRNIITVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S    R LRE  K + +++     + A   +E+ARG 
Sbjct: 185 A--------PPTGAMSAHLARLVSRPAYRSLRERIKVLGEKLPKFFLDKARLSEEFARGF 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLFEELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GY  AE
Sbjct: 237 LVGG--TLFEELGFYYVGPIDGHNLKHLLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            ++DKYHGV +FD  TGKQ K+ +   SYT  F++ALI EA  D  +V+I AAM  GTGL
Sbjct: 294 ASSDKYHGVNRFDIVTGKQVKAQSNVLSYTKVFSKALIEEATHDDKIVSITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 354 DAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F+  LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEIELMHMVRTAAAYDQGPL 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG G+G++LP   +G  LE+GKGR+L EG R+AL+ +GT +   L A+  L + G
Sbjct: 474 SFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGNRIALVCFGTRMSEVLRAADALVAEG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+R LA+ HE+L+T+EEG+IGGFG+H++QFLAQ+GLL+  +K 
Sbjct: 532 LSTTVADARFAKPLDKDLMRCLAREHEILVTIEEGAIGGFGAHLLQFLAQEGLLEYGLKV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L LPD Y++HGSP   L++ GL    I  TVF  LG+
Sbjct: 592 RTLKLPDEYLNHGSPEKVLSRVGLDAVGIVNTVFTALGR 630


>gi|86356559|ref|YP_468451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CFN 42]
 gi|118595609|sp|Q2KBR2.1|DXS_RHIEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86280661|gb|ABC89724.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli CFN
           42]
          Length = 638

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/638 (58%), Positives = 466/638 (73%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHS 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSST
Sbjct: 65  VFDTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMA+  DL+     V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAIAADLEKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 236 YVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGKGYPPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 353 LDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TAAA D  P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYDAGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL AS  LE+ 
Sbjct: 473 ISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH L+R LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD  +K
Sbjct: 531 GLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R LV+PD +++   P    A AGL  + I +TVF  L
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRAL 628


>gi|15888088|ref|NP_353769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
           C58]
 gi|22095590|sp|Q8UHD7.1|DXS_AGRT5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|15155716|gb|AAK86554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
           C58]
          Length = 639

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/640 (58%), Positives = 471/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG GHSST
Sbjct: 65  VFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L G    V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D+ ++ + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  L++GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 473 ISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 591 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|359408195|ref|ZP_09200667.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
           proteobacterium HIMB100]
 gi|356676952|gb|EHI49301.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
           proteobacterium HIMB100]
          Length = 640

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/642 (57%), Positives = 471/642 (73%), Gaps = 15/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I+ P  +++LS  +L  LA+ELR DVI  VS+TGGHLG+ LGV+ELT+ALHYVF
Sbjct: 6   TPLLDHIHTPDQLRSLSASQLPLLAEELRYDVIRAVSQTGGHLGAGLGVVELTIALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRR++M  +RQ  GLSGFTKRSES+YD FG GHSSTSI
Sbjct: 66  DTPADRLIWDVGHQAYPHKILTGRREQMSGLRQEGGLSGFTKRSESDYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RDL+G  NNV+AVIGDGAM+AG A+EA+NNAG +DS+++VILNDN      
Sbjct: 126 SAGLGMAVARDLQGGHNNVIAVIGDGAMSAGMAFEALNNAGAMDSNLLVILNDNDM---- 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ LS + S+RP + +R++ K V  +    + + A +  + AR ++
Sbjct: 182 -----SIAPPVGAMSAYLSEMISSRPYQSIRDLVKEVASRFPAEIEKTARRAKDLARDLV 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           SG   +LF ELG ++IGP+DGH+ D L+ +L  +K+ +  GPVL+HVVTEKG+G+P+A  
Sbjct: 237 SGH--SLFSELGFFHIGPIDGHDFDHLLPVLRNLKDGQIGGPVLVHVVTEKGKGHPFAGP 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +++KYH V KFD  TG+Q KSSA + +YT  FA+ L A AE D+ +VAI AAM  GTGLN
Sbjct: 295 SSEKYHAVPKFDVVTGQQSKSSANSPTYTQVFADTLSALAEEDEKIVAITAAMPSGTGLN 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
             +   P+R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 QMMTTCPSRVFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAG+VGADG TH G FD+ ++ACLPNMV+M PSDEAEL HM ATAA+ DD PS 
Sbjct: 415 VRFAIDRAGVVGADGATHAGVFDLAYLACLPNMVIMCPSDEAELAHMTATAASYDDGPSA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G ELP   +  PLE+GKGR+L +GE +A+L  GT  Q+C   +  LE +G+
Sbjct: 475 VRYPRGTGTGAELPQTPE--PLEIGKGRLLQQGEELAILSLGTMAQTCSEVARRLEQDGI 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
            +T+ADARF KP D  L+R LA +H+ L+ VEE S GGF +H++QF+A +GLLD  +K R
Sbjct: 533 SVTLADARFAKPFDADLLRQLATTHDALMVVEESSPGGFSAHLLQFMATEGLLDTGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL--GQTR 713
              LPD YIDH   A QLA AGL    +      I+  GQ+R
Sbjct: 593 VASLPDAYIDHADRARQLAGAGLDADSLYQLASQIVTAGQSR 634


>gi|116250747|ref|YP_766585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|118595610|sp|Q1MKN4.1|DXS_RHIL3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115255395|emb|CAK06470.1| putative 1-deoxy-d-xylulose-5-phosphate synthase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 638

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/643 (58%), Positives = 467/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 GGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGSHV+ FLA +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|319898602|ref|YP_004158695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
           73]
 gi|319402566|emb|CBI76111.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
           73]
          Length = 640

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/642 (58%), Positives = 469/642 (73%), Gaps = 15/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ L    L QLA ELR + I  VS TGGHLG+ LGVIELT+ALH
Sbjct: 3   RPLTPLLDLIHLPQDLRALPESNLLQLAHELRTETIDTVSVTGGHLGAGLGVIELTIALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVFN P DRI+WDVGHQTYPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSS
Sbjct: 63  YVFNTPDDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSS 122

Query: 191 TSISAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           TSISAGLGMA+   LK   + N+++VIGDGA++AG AYEAMNNAG LD+ +IVILNDN  
Sbjct: 123 TSISAGLGMAMVSALKAEERRNIISVIGDGAISAGMAYEAMNNAGALDARLIVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PP GA+S+ L+RL S    R LR+  K ++K++     E A   +E+A
Sbjct: 182 MSIA--------PPTGAMSAHLARLVSRPSYRNLRQRIKILSKKLPKFFLEKARYSEEFA 233

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           R    G   TLF+ELG YY+GP+DGHN   L+ +L+ V+     GPVL+HVVT KG+GY 
Sbjct: 234 RSFFVGG--TLFDELGFYYVGPIDGHNFGHLLPVLKNVRECPD-GPVLVHVVTHKGKGYA 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE ++DKYHGV +FD  TGKQ K+ + + SYT  F++ALI EA  D  +V I AAM  G
Sbjct: 291 PAEASSDKYHGVNRFDVITGKQVKAQSNSLSYTKVFSKALIEEATHDNKIVGITAAMPNG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+ F  +FP R FDVGIAEQHAVTFAAG+A EG KPF AIYS+F+QRAYDQ++HDV L
Sbjct: 351 TGLDFFAEKFPKRMFDVGIAEQHAVTFAAGIASEGYKPFVAIYSTFLQRAYDQIIHDVSL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           QKLPVRFA+DRAG VGADG TH GSFD+ F+A LP+ V+MAPSDE EL HMV TAAA D 
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPDFVIMAPSDEVELMHMVRTAAAYDQ 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG GIG++LP   +G  LE+GKGR+L EG ++AL+ +GT +   L A+  L 
Sbjct: 471 GPISFRYPRGEGIGMDLP--QRGELLEIGKGRVLCEGSKIALVCFGTRLSEVLVAADELV 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
             GL  TVADARF KPLD  L+R LA+ HEVL+T+EEG+IGGFG+H++QFL+Q+GLL+  
Sbjct: 529 VEGLSTTVADARFAKPLDRDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLSQEGLLEHG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +K R L  PD+Y++HG P   L+Q GL  + I  TVF+ LG+
Sbjct: 589 LKVRTLKFPDKYLNHGLPDKVLSQIGLDATGIINTVFSALGR 630


>gi|300022017|ref|YP_003754628.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299523838|gb|ADJ22307.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 648

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/636 (59%), Positives = 470/636 (73%), Gaps = 13/636 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+  P  ++ L+  +L QLA ELR + I  VS TGGHLG+ LGV+ELTVALHY+F
Sbjct: 11  TPLLDTVKTPDDLRKLAEADLPQLAAELRTETIDAVSVTGGHLGAGLGVVELTVALHYLF 70

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDV HQTYPHKILTGRRD++ T+RQ +GLSGFTKR+ESE+D FG  HSSTSI
Sbjct: 71  DTPRDRLIWDVSHQTYPHKILTGRRDRIRTLRQPNGLSGFTKRTESEFDPFGAAHSSTSI 130

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RD+ G   NVV VIGDGAM+AG AYEA+NNAG  +  +IVILNDN  +S+ 
Sbjct: 131 SAGLGMAVARDMSGGDTNVVCVIGDGAMSAGMAYEALNNAGARNERLIVILNDN-DMSIA 189

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALSS L+R  S+     +R+ AK + +++       AA+V+EY R + 
Sbjct: 190 --------PPTGALSSYLARTTSSASYFAVRDFAKQLAQRLPKSWERRAARVEEYTRSLW 241

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G G+  FEELG +Y+GP+DGH++  LV +L+ V++ K  GP+L+HV+T+KG+GY  AE 
Sbjct: 242 QGGGA-WFEELGFHYVGPIDGHDLGQLVPVLKNVRDAKQ-GPILVHVMTKKGKGYAPAEA 299

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           + DKYHGVAKF+  TG Q K  A   SYT  FA++LIAEA+ D  +VAI AAM  GTGL+
Sbjct: 300 SPDKYHGVAKFNVVTGVQAKPQAAAPSYTRVFADSLIAEAKKDPKIVAITAAMPDGTGLD 359

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F R FP R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QR YDQVVHDV +Q LP
Sbjct: 360 VFGREFPDRTFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLP 419

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAG VGADG TH GSFD+ ++ CLPN V+MA +DEAEL HMVATAA+IDDRPS 
Sbjct: 420 VRFAIDRAGFVGADGATHAGSFDLAYLGCLPNFVIMAAADEAELKHMVATAASIDDRPSA 479

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G GV++P   + +P  +GKGRIL EG  VALL  GT +   L A+  L + GL
Sbjct: 480 FRYPRGEGTGVQMPEVGEVLP--IGKGRILREGSTVALLSLGTRLGEALKAADQLAALGL 537

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  LIR LA++HEVL+T+EEGSIGGFGSHV+Q+L+ +GLLD  +K R
Sbjct: 538 STTVADARFMKPLDTDLIRQLAQNHEVLVTIEEGSIGGFGSHVLQYLSDNGLLDHGLKVR 597

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
             V+PD ++D   P     +AGL+ S I  TV + L
Sbjct: 598 SKVMPDCFVDQDKPEVMCQKAGLSASGIVETVRSAL 633


>gi|241203354|ref|YP_002974450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240857244|gb|ACS54911.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 638

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/643 (58%), Positives = 467/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     +P+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAYPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGVDMPV--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGSHV+ FLA +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEIVITVEEGSIGGFGSHVMHFLATEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|260431853|ref|ZP_05785824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415681|gb|EEX08940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 642

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/646 (58%), Positives = 463/646 (71%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +N P  +K  S  +L QLA ELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPNTPLLDLVNRPADLKQFSDAQLHQLAHELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRQKGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALS+ LSR+ +  P  +L+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSNYLSRIYAEEPFHDLKAAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +GM    G TLFEELG  Y+GP+DGH++D L+ +L  VK  + TGP+LIH +T+K
Sbjct: 233 AKEMLKGM--AVGGTLFEELGFSYVGPIDGHDLDQLLPVLRTVK-ARATGPILIHALTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A DK H  AKFD  TGKQ K+ +   SYT+ F + L+ EA  D  +VA+ A
Sbjct: 290 GKGYAPAEQARDKGHATAKFDVVTGKQQKAPSNAPSYTSVFGKTLVDEASRDDKIVAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDV IAEQH VTF+A LA  GLKPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERYPSRCFDVAIAEQHGVTFSAALAAGGLKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ +++ LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLSNLPGMVVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G+GV+LP   +G  LE+GKGR++  G RVALL +GT +     A
Sbjct: 470 AAHDDGPIAFRYPRGEGVGVDLP--ERGQVLEIGKGRMIQSGARVALLSFGTRLAEVQKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  LI  LA +HE LIT+EEG+IGGFGSHV Q LA +G
Sbjct: 528 AESLTARGITPTIADARFAKPLDRDLILDLAANHEALITIEEGAIGGFGSHVAQLLADEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SPAD  A AG+   HI A V ++LG
Sbjct: 588 VFDRGLKYRSMVLPDIFIDQASPADMYAVAGMNAEHIEAKVLSVLG 633


>gi|335032694|ref|ZP_08526069.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
           31749]
 gi|333795869|gb|EGL67191.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
           31749]
          Length = 636

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/640 (58%), Positives = 470/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 2   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG GHSST
Sbjct: 62  VFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAGHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L G    V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 122 SISAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 181 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 233 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D+ ++ + AAM  GTG
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 350 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  L++GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 470 ISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 528 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 587

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 588 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 627


>gi|163867874|ref|YP_001609078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
           105476]
 gi|189027767|sp|A9IQP2.1|DXS_BART1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|161017525|emb|CAK01083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
           105476]
          Length = 635

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/639 (58%), Positives = 471/639 (73%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD + +P  ++ L    L QLA+ELR + I  VS TGGHLG+ LGV+ELTVALHY+F
Sbjct: 6   TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQTYPHKILTGRR+K+ T+RQ  GLSGFTKR ES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRVESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKG-RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   LK  +K  V+AVIGDGAM+AG AYEAMNNAG L++ +IVILNDN  +S+
Sbjct: 126 SAGLGMAVASALKEEKKRKVIAVIGDGAMSAGMAYEAMNNAGALNARLIVILNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP G++S+ L+RL S    R LRE  K +++++     + A + +E+ARG+
Sbjct: 185 A--------PPTGSMSAHLARLVSRPSYRHLRERVKMLSEKLPKFFWDKARRSEEFARGL 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLF+ELG YY+GP+DGHN+  L+ +L+ V+     GPVL+HVVT KG+GYP AE
Sbjct: 237 LVGG--TLFDELGFYYVGPIDGHNLGHLLPVLKNVREYPH-GPVLVHVVTHKGKGYPPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            ++DKYHGV +FD  TGKQ K+S+    YT  F++AL+ EA  D  +V I AAM  GTGL
Sbjct: 294 ASSDKYHGVNRFDVTTGKQVKASSNILPYTKVFSKALVEEACHDDKIVGITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  +FP + FDVGIAEQHAVTFAAGLACEG KPF AIYS+F+QRAYDQ++HDV +QKL
Sbjct: 354 DSFAEKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F+A LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDELELMHMVRTAAAYDQGPI 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG GIG++LP   +G  LE+GKGR+L EG R+AL+ +GT +   L A+  L + G
Sbjct: 474 SFRYPRGEGIGIDLP--QRGEILEIGKGRVLREGNRIALVCFGTRMSEVLRAADRLGAKG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD  L+R LA+ HEVL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K 
Sbjct: 532 LSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L  PD Y++HGSP   L+  GL    I  TV  ++G+
Sbjct: 592 RTLKFPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTVVGR 630


>gi|159046066|ref|YP_001534860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
 gi|157913826|gb|ABV95259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
          Length = 658

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/650 (58%), Positives = 469/650 (72%), Gaps = 19/650 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP LD +  P  +K L+ REL  LA ELRA+VI  VS+TGGHLGSSLGV+ELTVA+H
Sbjct: 21  RPKTPTLDRVACPADLKALTDRELATLATELRAEVISAVSETGGHLGSSLGVVELTVAIH 80

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VFN P D+++WDVGHQ YPHK+LT RRD++ T+RQ  GLSGFTKRSES YD FG  HSS
Sbjct: 81  AVFNTPFDKLVWDVGHQCYPHKVLTERRDRIRTLRQKGGLSGFTKRSESIYDPFGAAHSS 140

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LG A  RDL G   + +AVIGDG+++AG AYEAMNNAG     + VILNDN ++
Sbjct: 141 TSISAALGFATARDLGGPTGDAIAVIGDGSISAGMAYEAMNNAGSEKRRLFVILNDN-EM 199

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S+ LS L S+ PL  L+E+A+GV + + GP+ E A +    AR
Sbjct: 200 SIA--------PPTGAMSTYLSDLASSGPLYALKELAEGVERSLPGPLREGAQR----AR 247

Query: 311 GMISG---SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
            +++G   S +TLFEELG  YIGP+DGH++  L+ +L   +  K +GPVLIH  T KG+G
Sbjct: 248 NLVTGEHGSSATLFEELGFDYIGPIDGHDIPQLLQVLRAAR-AKASGPVLIHACTVKGKG 306

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE + D YHGVAKFD ATGKQ KS+    +YT  F   L AEAE D  + A+ AAM 
Sbjct: 307 YSPAELSDDCYHGVAKFDVATGKQQKSAPNAPAYTKVFGATLTAEAERDSRICAVTAAMP 366

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
           GGTG+N+  +RFP R FDVGIAEQHAVTFAAGLA  G+KPFCAIYSSF+QR YDQVVHDV
Sbjct: 367 GGTGVNIMGKRFPGRVFDVGIAEQHAVTFAAGLAAGGMKPFCAIYSSFLQRGYDQVVHDV 426

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            LQKLPVRFA+DRAGLVGADGPTH G++D+ +++ LPNM VMA +DEAEL HMVATAAA 
Sbjct: 427 ALQKLPVRFAIDRAGLVGADGPTHAGAYDIAYLSNLPNMTVMAAADEAELVHMVATAAAY 486

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DD P  FRYPRG G+G+E+P   +G  LE+GKGRI+ EG  VA+L  G  +  CL A+  
Sbjct: 487 DDGPIAFRYPRGEGVGIEMP--ERGSLLEIGKGRIIREGGSVAILSLGAHLSECLKAAED 544

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           LE+ G+ +T+ADARF KPLD  LI  L  +HE LITVE+G+ GGFG+ V+ +LA+ G LD
Sbjct: 545 LEARGIGVTIADARFAKPLDTDLIAQLTANHEALITVEQGAEGGFGAMVLHWLARTGRLD 604

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           GT+K R + LPDR+ID  SPAD    AGLT  HIA  V +++G     LE
Sbjct: 605 GTLKIRTMTLPDRFIDQASPADMYHDAGLTARHIAGQVLHLMGAETALLE 654


>gi|395791326|ref|ZP_10470784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
           382]
 gi|395408689|gb|EJF75299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
           382]
          Length = 640

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/639 (58%), Positives = 469/639 (73%), Gaps = 15/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L   +L +LA ELR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDRIFLPHDLRALPESDLVRLAAELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG GHSSTSI
Sbjct: 66  NTPEDRIIWDVGHQAYPHKILTGRRDQIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125

Query: 194 SAGLGMAVGRDLKGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           SAGLGMAV   LK   + N++AVIGDGAM+AG AYEAMNNAG LD+ +I++LNDN  +S+
Sbjct: 126 SAGLGMAVASALKQEERRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIIVLNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PP GA+S+ L+RL S    R LRE  K ++K++     E A + +E+ARG+
Sbjct: 185 A--------PPTGAMSAHLARLVSRPAYRSLRERVKVLSKKLPKFFLEKARRSEEFARGL 236

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           + G   TLFEELG YY+GP+DGHN+  L+ +L+ V+   + GPVL+HVVT KG+GY  AE
Sbjct: 237 LVGG--TLFEELGFYYVGPIDGHNLRHLLPVLKNVREYPS-GPVLVHVVTHKGKGYAPAE 293

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            ++DKYHGV +FD  TG+Q K+ +    YT  F++ALI EA  D  +V+I AAM  GTGL
Sbjct: 294 ASSDKYHGVNRFDIITGQQVKAPSNALPYTKVFSKALIEEAVHDDKIVSITAAMPTGTGL 353

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           + F  +FP R FDVGIAEQHAVTFAAG+ACEG KPF AIYS+F+QRAYDQ++HDV +Q+L
Sbjct: 354 DAFAEKFPERMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHDVSIQRL 413

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAG VGADG TH GSFD+ F++ LP  VVMAPSDE EL HMV TAAA D  P 
Sbjct: 414 PVRFAIDRAGFVGADGATHAGSFDIVFLSTLPEFVVMAPSDEVELMHMVRTAAAYDQGPV 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            FRYPRG G+G++LP   +G  LE+GKGRIL EG R+AL+ +GT +   L A+  L + G
Sbjct: 474 SFRYPRGEGVGMDLP--QRGELLEIGKGRILREGNRIALVCFGTRMSEVLVAADALGAEG 531

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TV DARF KPLD  L+R LA+ HEVLIT+EEG+IGGFG+H++QFLAQ+GLL+  +K 
Sbjct: 532 LSTTVVDARFAKPLDKDLMRRLAREHEVLITIEEGAIGGFGAHLLQFLAQEGLLEHGLKV 591

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R L  PD Y++HG P   L++ GL    I  TVF  LG+
Sbjct: 592 RTLKFPDEYLNHGLPEKVLSRIGLDAVGIVNTVFTALGR 630


>gi|424888383|ref|ZP_18311986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2012]
 gi|393173932|gb|EJC73976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2012]
          Length = 638

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/643 (58%), Positives = 467/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 GGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVLQYLSSEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630


>gi|126730372|ref|ZP_01746183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
 gi|126709105|gb|EBA08160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
          Length = 649

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/648 (57%), Positives = 468/648 (72%), Gaps = 18/648 (2%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
            RP TPLLD ++ P  +K  S  ELK++A ELR + I  VS+TGGHLG+ LGVIELTVAL
Sbjct: 11  NRPETPLLDRVHNPADLKQFSDAELKRVAQELREETISTVSETGGHLGAGLGVIELTVAL 70

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           H VF+AP+D+I+WDV HQ YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  HS
Sbjct: 71  HSVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAHS 130

Query: 190 STSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
           STSISA LG AV RDL G  +    + +AVIGDGAM+AG A+EA+NNAG+L   +IVILN
Sbjct: 131 STSISAALGFAVARDLGGACDTGHGDAIAVIGDGAMSAGMAFEALNNAGHLKKRLIVILN 190

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PP GALSS L+RL +  P  +L+  AKG    +  P  E A + 
Sbjct: 191 DN-EMSIA--------PPTGALSSYLTRLYAEAPFHDLKAAAKGAVSLLPEPFREGAKRA 241

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
            E  +GM    G TLFEELG  Y+GP+DGH++D L+ +L  VK  + TGP+LIH +T KG
Sbjct: 242 KEMLKGM--AVGGTLFEELGFSYLGPIDGHDLDQLLPVLRTVK-ARATGPILIHALTRKG 298

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GY +AE AADK H  AKFD  TG+Q KS +   SYT  FAEAL+ EA  D  + A+ AA
Sbjct: 299 KGYSHAEHAADKGHARAKFDVVTGEQKKSPSNAPSYTKVFAEALMQEAAEDSRICAVTAA 358

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+LF  R+P+RCFDVGIAEQH VTF+AGLA  G++PFCA+YS+F+QR YDQVVH
Sbjct: 359 MPDGTGLDLFAERYPSRCFDVGIAEQHGVTFSAGLAAGGMRPFCAMYSTFLQRGYDQVVH 418

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q+LPVRFA+DRAGLVGADG TH GS+DV +++ LP  VVMA +DEAEL HMVATAA
Sbjct: 419 DVAIQRLPVRFAIDRAGLVGADGATHAGSYDVAYLSNLPGFVVMAAADEAELKHMVATAA 478

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           A D+ P  FRYPRG G GVE+P   +G+PL++G GR++ EG RVA+L +GT +   + A+
Sbjct: 479 AHDEGPIAFRYPRGEGEGVEMP--VRGVPLQIGVGRVMREGTRVAILSFGTRLGESIKAA 536

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
             LE+ G+ +TVADARF KPLD  L+  LA+ HE LITVEEG++GGFGSHV Q LA++G+
Sbjct: 537 EALEARGVSVTVADARFAKPLDRDLVLRLAREHEALITVEEGAVGGFGSHVAQLLAEEGV 596

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            D  +K+R +VLPD +ID  SP D  A A L    I A V + LG  R
Sbjct: 597 FDRGLKYRSMVLPDIFIDQASPRDMYAVAQLNAEDIEAKVLSALGVER 644


>gi|424915247|ref|ZP_18338611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM597]
 gi|392851423|gb|EJB03944.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM597]
          Length = 638

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/643 (57%), Positives = 467/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++IT+EEGS+GGFGS V+Q+L+ +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITIEEGSVGGFGSQVMQYLSSEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|89069937|ref|ZP_01157270.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
           HTCC2516]
 gi|89044491|gb|EAR50619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
           HTCC2516]
          Length = 637

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/642 (58%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RPPTP LD ++ P  ++ LS  EL +LA ELRA+ I  VS+TGGHLG+ LGVIELTVA
Sbjct: 2   TDRPPTPTLDKVHLPADLRRLSDGELHKLAHELRAETISAVSETGGHLGAGLGVIELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF  P+D+++WDV HQ+YPHKILTGRRD++ T+RQ DGLSGF KRSES YD FG  H
Sbjct: 62  LHAVFETPRDKLIWDVSHQSYPHKILTGRRDRIRTLRQKDGLSGFCKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A  RDL G   + +AVIGDGAM+AG AYEAMNNAG+L   +IVILNDN 
Sbjct: 122 SSTSISAALGFAAARDLGGDAGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGA+SS LSRL +  P +EL+  AKG    +  P  + A +  E 
Sbjct: 181 EMSIA--------PPVGAMSSYLSRLYAGAPFQELKAAAKGAVSFLPPPFQQGAKRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +    G TLFEELG  Y+GP+DGH+++ L+A+L  VK  +  GP+LIH +T KG+GY
Sbjct: 233 LKHL--AVGGTLFEELGFSYVGPIDGHDLEQLLAVLRTVK-ARADGPILIHAITRKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADK HGV+KFD  TG+Q K+ +   SYT+ FA+ALIAEA  D  VVA+ AAM  
Sbjct: 290 APAEGAADKGHGVSKFDVITGEQKKAKSNAPSYTSVFAKALIAEAARDDKVVAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL  F+ R+ +RCFDVGIAEQHAVTFAAG+A  G+KPFCAIYS+F+QR YDQVVHDV 
Sbjct: 350 GTGLKSFMERYASRCFDVGIAEQHAVTFAAGMAAGGMKPFCAIYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH G+FDV ++A LP   VMA +DEAEL  MVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGAFDVAYLANLPGFTVMAAADEAELVRMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P  FR+PRG G+GVE+P   +  PLE+GKGRI+ EG RVA+L +GT +Q    A   L
Sbjct: 470 DGPIAFRFPRGEGVGVEMPADPQ--PLEIGKGRIVREGSRVAILSFGTRLQEAETACERL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
              G+  T+ADARF KPLD  LI  LA+ H+ LIT+EEG+IGGFGSHV Q LA+ G+ DG
Sbjct: 528 AGRGITPTLADARFAKPLDEELILRLAREHDALITLEEGAIGGFGSHVAQLLAEKGVFDG 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            + +R +VLPD +ID  SP D    AGL   HI   V   LG
Sbjct: 588 GLAYRSMVLPDIFIDQASPRDMYDVAGLNAEHIEQKVLEALG 629


>gi|190890626|ref|YP_001977168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CIAT 652]
 gi|229836075|sp|B3PS68.1|DXS_RHIE6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|190695905|gb|ACE89990.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli
           CIAT 652]
          Length = 638

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/640 (58%), Positives = 466/640 (72%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PKTPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHS 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSST
Sbjct: 65  VFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GYP A
Sbjct: 236 YVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-ARGPVLIHVVTQKGKGYPPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEAALDDKIVGITAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV +Q 
Sbjct: 353 LDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TA A D  P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GV++P   +G  L++GKGRI+ EG +VALL +GT +  CL A+  LE+ 
Sbjct: 473 ISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD  +K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 591 IRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|126727248|ref|ZP_01743084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703457|gb|EBA02554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2150]
          Length = 646

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/645 (57%), Positives = 463/645 (71%), Gaps = 18/645 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TP LD +N P  MK LS  EL+ LADELRA+ I  VS+TGGHLG+ LGV+ELTVALH 
Sbjct: 9   PQTPTLDRVNVPADMKGLSDPELRTLADELRAETISAVSQTGGHLGAGLGVVELTVALHA 68

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ PKDR++WDV HQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES +D FG  HSST
Sbjct: 69  IFDTPKDRLIWDVSHQCYPHKILTGRRDRIRTLRQQGGLSGFTKRSESPFDPFGAAHSST 128

Query: 192 SISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           SISA LG A  RDL G       + +AVIGDGAM+AGQAYEAMNNAG+L   + VILNDN
Sbjct: 129 SISAALGFATARDLGGAPEHGIGDAIAVIGDGAMSAGQAYEAMNNAGHLGKRLFVILNDN 188

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
            ++S+         PPVGA+SS LSRL +  P +EL+  AKG    +  P  E A +  E
Sbjct: 189 -EMSIA--------PPVGAMSSYLSRLYAGDPFQELKAAAKGAVSLLPEPFQEGARRAKE 239

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
             +GM  G   TLFEELG  Y+GP+DGH++D L+ +L  VK T+ TGP+LIHV+T+KG+G
Sbjct: 240 MLKGMTVGG--TLFEELGFSYLGPIDGHDLDQLLPVLRTVK-TRATGPILIHVITQKGKG 296

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE A DK HGV+KFD  TGKQ K+ +   SYT  FA+AL+ EA  D  + AI AAM 
Sbjct: 297 YAPAEAARDKGHGVSKFDVVTGKQKKTPSNAPSYTGVFAKALMDEASRDDKITAITAAMP 356

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTGLNLF  +FP RCFDVGIAEQHAVTFAA  A  G+KPFCA+YS+F+QR YDQVVHDV
Sbjct: 357 DGTGLNLFAEKFPKRCFDVGIAEQHAVTFAAAQAAGGMKPFCALYSTFLQRGYDQVVHDV 416

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +Q+LPVRFA+DRAGLVGADG TH G+FD+ F+A LP+ VVMA +DEAEL HMVATA A 
Sbjct: 417 AIQRLPVRFAIDRAGLVGADGATHAGAFDIGFLANLPDFVVMAAADEAELVHMVATATAY 476

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DD P  FR+PRG G+GV LP   +G P+E+GKGR++ +G RVA+L +GT +     A   
Sbjct: 477 DDGPIAFRFPRGEGVGVTLP--ERGEPIEIGKGRMIAKGARVAILSFGTRLSEVQKAVEA 534

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L + G+  T+ADARF KPLD  +I  LA +HE LIT+EEG +GGFGSHV Q LA +G+ D
Sbjct: 535 LSARGISPTIADARFAKPLDREMILDLAANHEALITIEEGVVGGFGSHVAQLLADEGVFD 594

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
             +++R +VLPD +IDH +P D    A +  + I A V ++LG T
Sbjct: 595 NGLRFRSMVLPDTFIDHANPKDMYDDAKMNAADIEAKVLDVLGVT 639


>gi|408788445|ref|ZP_11200164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
 gi|408485687|gb|EKJ94022.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
          Length = 639

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/640 (58%), Positives = 469/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 65  VFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L G    V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D+ ++ + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 353 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA SDEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  L++GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 473 ISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 591 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|258541495|ref|YP_003186928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384041416|ref|YP_005480160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384049931|ref|YP_005476994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384053041|ref|YP_005486135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384056273|ref|YP_005488940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384058914|ref|YP_005498042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384062208|ref|YP_005482850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384118284|ref|YP_005500908.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256632573|dbj|BAH98548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635630|dbj|BAI01599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638685|dbj|BAI04647.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641739|dbj|BAI07694.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644794|dbj|BAI10742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647849|dbj|BAI13790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650902|dbj|BAI16836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653893|dbj|BAI19820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 675

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/653 (58%), Positives = 475/653 (72%), Gaps = 32/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD + YP  ++NLS+ +LKQ+ADELRA+ +  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 20  PALDRVEYPADLRNLSVEQLKQVADELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 79

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ES+YD FG  HSSTSIS
Sbjct: 80  TPDDKVIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSIS 139

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA   G     +IVILN
Sbjct: 140 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGPGAERLIVILN 199

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A    K++  P+   A K 
Sbjct: 200 DN-EMSI--------APPVGAMSNYLSRLMSSRKFMGLRELAGKFVKKLPAPVERTARKA 250

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMI+G   TLFEELG YY+GPVDGH++  LV+IL  +++T   GP+++HV+TEKG
Sbjct: 251 DEYARGMITGG--TLFEELGFYYVGPVDGHDLPQLVSILRNLRDTDN-GPIMLHVITEKG 307

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AEKA DKYH VAKF+  TG+Q K  A   SYT+ F+  L   A  D  + AI AA
Sbjct: 308 HGYQPAEKAGDKYHAVAKFNVVTGEQKKGPAGPPSYTSVFSRELTRRAATDNKIAAITAA 367

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 368 MPSGTGLDAFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 427

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH GSFD+ ++ CLP M +MAPSDE EL HM ATAA
Sbjct: 428 DVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGMTIMAPSDELELLHMTATAA 487

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE--GER------VALLGYGTA 597
             D+ P   RYPRG+G+G++LP   +G PLE+GKGRI+ E  G+       VA+L  G  
Sbjct: 488 LFDEGPIALRYPRGSGLGLDLP--AEGTPLEIGKGRIIREMGGQSGPEKGGVAILSLGPR 545

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +  CL A+ +L ++GL  TVADARF KP D  L+ +LA++H VLIT+EEGS GGFGS V 
Sbjct: 546 LAECLKAADMLAAHGLPPTVADARFAKPFDTELVENLARNHAVLITIEEGSEGGFGSLVG 605

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             LA+ GLLD  V++RPL LPDR+IDH + A Q A+AGL+  HI  T  + LG
Sbjct: 606 HHLARTGLLD-NVRFRPLTLPDRFIDHNTQAAQYAEAGLSAPHIVGTALSALG 657


>gi|424909631|ref|ZP_18333008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae USDA 2370]
 gi|392845662|gb|EJA98184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae USDA 2370]
          Length = 636

 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/640 (58%), Positives = 469/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 2   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 62  VFNTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L G    V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 122 SISAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 181 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 233 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D+ ++ + AAM  GTG
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 350 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA SDEAEL HMV TAAA D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  L++GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 470 ISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HE+L+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 528 GLSTTVADARFAKPLDLDLIRQLAAHHEILVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 587

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 588 VRTLTLPDQWVEQAKPETMYANAGLDRAGIISTVFNALGQ 627


>gi|258542580|ref|YP_003188013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384042501|ref|YP_005481245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384051018|ref|YP_005478081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384054126|ref|YP_005487220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384057360|ref|YP_005490027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384060001|ref|YP_005499129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384063293|ref|YP_005483935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384119303|ref|YP_005501927.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256633658|dbj|BAH99633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636717|dbj|BAI02686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639770|dbj|BAI05732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642826|dbj|BAI08781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645881|dbj|BAI11829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648934|dbj|BAI14875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651921|dbj|BAI17855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654978|dbj|BAI20905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 662

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/664 (57%), Positives = 479/664 (72%), Gaps = 36/664 (5%)

Query: 68  HSQRPPT----PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVI 123
           H+   PT    P LD + YP  ++NLS+ +LKQ+ADELRA+ +  VS TGGHLG+SLGV+
Sbjct: 6   HTSPIPTLGRFPALDRVEYPADLRNLSVEQLKQVADELRAETVDAVSTTGGHLGASLGVV 65

Query: 124 ELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDC 183
           ELTVALH VF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ES+YD 
Sbjct: 66  ELTVALHAVFDTPDDKVIWDVGHQAYPHKILTGRRDRIRTLRQPGGLSGFTRRAESKYDP 125

Query: 184 FGTGHSSTSISAGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNA---G 234
           FG  HSSTSISAGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA   G
Sbjct: 126 FGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNAAVAG 185

Query: 235 YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI 294
                +IVILNDN ++S+         PPVGA+S+ LSRL S+R    LRE+A    K++
Sbjct: 186 PGAERLIVILNDN-EMSI--------APPVGAMSNYLSRLMSSRKFMGLRELAGKFVKKL 236

Query: 295 GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG 354
             P+   A K DEYARGMI+G   TLFEELG YY+GPVDGH++  LV+IL  +++T   G
Sbjct: 237 PAPVERTARKADEYARGMITGG--TLFEELGFYYVGPVDGHDLPQLVSILRNLRDTDN-G 293

Query: 355 PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAE 414
           P+++HV+TEKG GY  AEKA DKYH VAKF+  TG+Q K  A   SYT+ F+  L   A 
Sbjct: 294 PIMLHVITEKGHGYQPAEKAGDKYHAVAKFNVVTGEQKKGPAGPPSYTSVFSRELTRRAA 353

Query: 415 VDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 474
            D  + AI AAM  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+
Sbjct: 354 TDNKIAAITAAMPSGTGLDAFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYST 413

Query: 475 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE 534
           F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH GSFD+ ++ CLP M +MAPSDE
Sbjct: 414 FLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGMTIMAPSDE 473

Query: 535 AELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE--GER---- 588
            EL HM ATAA  D+ P   RYPRG+G+G++LP   +G PLE+GKGRI+ E  G+     
Sbjct: 474 LELLHMTATAALFDEGPIALRYPRGSGLGLDLP--AEGTPLEIGKGRIIREMGGQSGPEK 531

Query: 589 --VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 646
             VA+L  G  +  CL A+ +L ++GL  TVADARF KP D  L+ +LA++H VLIT+EE
Sbjct: 532 GGVAILSLGPRLAECLKAADMLAAHGLPPTVADARFAKPFDTELVENLARNHAVLITIEE 591

Query: 647 GSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           GS GGFGS V   LA+ GLLD  V++RPL LPDR+IDH + A Q A+AGL+  HI  T  
Sbjct: 592 GSEGGFGSLVGHHLARTGLLD-NVRFRPLTLPDRFIDHNTQAAQYAEAGLSAPHIVGTAL 650

Query: 707 NILG 710
           + LG
Sbjct: 651 SALG 654


>gi|89052579|ref|YP_508030.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
 gi|118595482|sp|Q28WA7.1|DXS1_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|88862128|gb|ABD53005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
          Length = 639

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/646 (57%), Positives = 468/646 (72%), Gaps = 20/646 (3%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +  P  +K LS  +LK+LADELRA++I+ VSKTGGH G+ LGV+ELTVA
Sbjct: 2   SDRPSTPLLDNVQSPNDLKGLSDFDLKRLADELRAEMIWTVSKTGGHFGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+++WDV HQ YPHKILTGRRD+M T+RQ DGLSGFTKRSES +D FG  H
Sbjct: 62  LHSVFDTPRDKLVWDVSHQCYPHKILTGRRDQMLTIRQKDGLSGFTKRSESPFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G  +    + +AVIGDGAM+ G A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGDSDTGHGDAIAVIGDGAMSGGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PP GALSS LSRL +  P +E +  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPTGALSSYLSRLYAGAPFQEFKAAAKGAVSLLPEPFQEGARR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +   +  G TLFEELG  Y+GP+DGH+++ L+++L  VK  +  GP+LIH +T+K
Sbjct: 233 AKELLKS--ATVGGTLFEELGFSYVGPIDGHDMESLLSVLRTVK-ARADGPILIHAITKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  +E  AD+ H  AKF+ ATG+Q K+ +   SYT  FA++LIAEAE D  VVA+ A
Sbjct: 290 GKGY--SEHRADRGHATAKFNIATGEQVKAPSNAPSYTKVFAQSLIAEAEDDPKVVAVTA 347

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+LF  RFP+RCFDVGIAEQH VTFAAG+A  GLKPF AIYS+F+QR YDQVV
Sbjct: 348 AMPDGTGLDLFAERFPSRCFDVGIAEQHGVTFAAGMAAGGLKPFAAIYSTFLQRGYDQVV 407

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GS+D++++A LP  VVMA +DEAEL HMV TA
Sbjct: 408 HDVAIQRLPVRFAIDRAGLVGADGCTHAGSYDISYLANLPGFVVMAAADEAELRHMVRTA 467

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             IDDRPS FR+PRG G+GV++P  ++G  LE+GKGR++ EG RVA+L +GT ++    A
Sbjct: 468 LEIDDRPSAFRFPRGEGMGVDMP--DRGTALEIGKGRMISEGNRVAILNFGTRLKEVQEA 525

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L   G+  T+ADARF KPLD ALI  LA+ HE LITVEEG++GGFGSHV   LA++ 
Sbjct: 526 AETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENA 585

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SP D  A AG+    I A V   LG
Sbjct: 586 VFDTGIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631


>gi|209548170|ref|YP_002280087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226801561|sp|B5ZS68.1|DXS_RHILW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|209533926|gb|ACI53861.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 638

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/643 (57%), Positives = 465/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVTYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NARGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L +GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 AGPISFRYPRGEGVGVDMPV--RGEILRIGKGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR  A+ HE++ITVEEGS+GGFGS V+Q+L+ +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|424898574|ref|ZP_18322148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2297]
 gi|393182801|gb|EJC82840.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2297]
          Length = 638

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/643 (57%), Positives = 467/643 (72%), Gaps = 14/643 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQLPKTPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA+  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAIAADLDKNDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           P AE AADKYHGV KFD  TG Q +      SYT+ FAEAL+ EA +D  +V I AAM  
Sbjct: 290 PPAEAAADKYHGVNKFDVITGAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP+RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+  LP  VVMA +DEAEL HMV TA A D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV++P   +G  L++G+GRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 GGPISFRYPRGEGVGVDMPV--RGEILQIGRGRIVKEGTKVALLSFGTRLADCLLAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA+ HE++ITVEEGS+GGFGS V+Q+L+ +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R LV+PD +++   P    A AGL  + I +TVF  LG+
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630


>gi|254485860|ref|ZP_05099065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
 gi|214042729|gb|EEB83367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
          Length = 642

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/646 (56%), Positives = 464/646 (71%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD ++ P  +K  S  EL +L+ ELRA+ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPETPLLDQVDRPADLKRFSDAELVKLSHELRAETISAVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H +F+ P+D+++WDVGHQ YPHKILT RRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 62  IHAIFDTPRDKLIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG AYEAMNNAG L   MIVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGDLQKRMIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGA+S+ LSRL +  P +E + VAKG    + GP  E A +
Sbjct: 182 NDN-EMSIA--------PPVGAMSAYLSRLYAEEPFQEFKAVAKGAVSMLPGPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM  G   TLFE+LG  YIGP+DGH+++ L+ +L  VK  + TGP LIHV+T+K
Sbjct: 233 AKDMLKGMTVGG--TLFEQLGFSYIGPIDGHDLNQLLPVLRTVK-ARATGPTLIHVITKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  +KF+  TG+Q K+ +   SYT  FA+ LIAEA  D  + A+ A
Sbjct: 290 GKGYGPAEAARDKGHATSKFNVLTGEQKKAPSNAPSYTRVFADTLIAEAARDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDVGIAEQH VTF+A LA  G+KPFC +YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGMKPFCTMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FDV F+A LP  VVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAFLANLPGFVVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FR+PRG G GV++P   +G+PLE+GKGRI+ EG+RVALL +GT +     A
Sbjct: 470 AAHDDGPIAFRFPRGEGNGVDMP--ERGVPLEIGKGRIITEGKRVALLSFGTRLAEVEKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  +I SLA  HE LIT+EEG++GGFGSHV Q L+ +G
Sbjct: 528 AEALRAKGITPTIADARFAKPLDREMILSLAAEHEALITIEEGAVGGFGSHVAQLLSDEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SP D  A AG+    I A V ++LG
Sbjct: 588 VFDVGLKYRSMVLPDTFIDQASPEDMYAVAGMNAEQIEAKVLDVLG 633


>gi|304393478|ref|ZP_07375406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
 gi|303294485|gb|EFL88857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
          Length = 637

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/645 (57%), Positives = 466/645 (72%), Gaps = 13/645 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD ++ P  ++ LS  +L QLADELR++++  VS TGGHLG+ LGV+EL+VALH
Sbjct: 2   RPETPLLDQVHIPADLRKLSDEQLPQLADELRSEMVDAVSVTGGHLGAGLGVVELSVALH 61

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VF+ P DRI+WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKR+ESEYD FG  HSS
Sbjct: 62  SVFDTPHDRIIWDVGHQCYPHKILTGRRDRIRTLRTETGLSGFTKRAESEYDPFGAAHSS 121

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISAGLGMA    L G   NVV+VIGDG++TAG AYEAMNNAG +D+  IVILNDN  +
Sbjct: 122 TSISAGLGMAEASKLAGVHRNVVSVIGDGSITAGMAYEAMNNAGGIDARQIVILNDN-DM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PP GA+S  L+RL S +  R LRE AK + +++   + + A K +EY R
Sbjct: 181 SIA--------PPTGAMSHYLARLVSGKTYRSLRETAKQLNEKLPKFIADKARKAEEYTR 232

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
            + +  G T+FEELG YY+GP+DGH++  L+ +L  V++ K+ GP+L+HV+TEKG+GY  
Sbjct: 233 NVFNEQG-TMFEELGFYYVGPIDGHDLSVLLPVLRNVRDAKS-GPILVHVITEKGKGYGP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE A DK H VAKF+  TG+Q KS     SYT  F ++L+ EAE D  +V I AAM GGT
Sbjct: 291 AEAAGDKLHAVAKFNVVTGEQSKSIPNAPSYTKVFGQSLVQEAENDPKIVGISAAMPGGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+++F   FP R +DVGIAEQHAVTFAAG+A EG KPFCAIYS+F+QR YDQVVHDV +Q
Sbjct: 351 GIDIFGEAFPERTYDVGIAEQHAVTFAAGMASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRF +DRAG VGADG TH GSFD+ ++ACLP   VMA +DEAEL HMVATA A DD 
Sbjct: 411 NLPVRFPIDRAGFVGADGATHAGSFDIAYLACLPGFTVMAAADEAELKHMVATAVAYDDG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG G+GV+LP   +G  LE+GKGRI  EG ++ALL +G+    C+AA+  LE 
Sbjct: 471 PLSFRYPRGEGVGVDLP--ERGSVLEIGKGRITKEGTKIALLSFGSRHADCMAAAEELEE 528

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL  TVADARF KPLD  LI  LA++HEVLITVEEGS+GGFG+ V+  LA  GLLD  +
Sbjct: 529 YGLSTTVADARFAKPLDTDLIERLARNHEVLITVEEGSVGGFGAMVLHHLAGSGLLDNGL 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           K R + +PD Y+D  SPA  +  AGL  + I  TVF  LG  ++A
Sbjct: 589 KIRTMTMPDVYLDQMSPARMIEVAGLDQAGIVKTVFAALGTEQDA 633


>gi|294678978|ref|YP_003579593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
           1003]
 gi|294477798|gb|ADE87186.1| 1-deoxy-D-xylulose-5-phosphate synthase-2 [Rhodobacter capsulatus
           SB 1003]
          Length = 636

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/642 (57%), Positives = 464/642 (72%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           SQ P TP+LD +  P  MK LS R+L +LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SQPPVTPILDRVRLPSDMKGLSDRDLHRLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG GH
Sbjct: 62  LHAVFDCPRDKIIWDVGHQCYPHKILTGRRDRIRTLRTRGGLSGFTKRSESPYDAFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG  + R+L     + +AVIGDGAMT G A+EA+N+ G+L   M VILNDN 
Sbjct: 122 SSTSISAALGFTMARELGSECGDAIAVIGDGAMTGGMAFEALNHGGHLGKRMFVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS L+RL +  P+++L+ +AKG    +  P  E A +  E 
Sbjct: 181 EMSIS--------PPVGALSSYLTRLYAEAPMQDLKAMAKGAVSLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            +GM  G   TLFEELG  Y+GPVDGH+++ L+ +   +K T+ TGPVLIH +T+KG+GY
Sbjct: 233 LKGMTIGG--TLFEELGFDYVGPVDGHDLETLLHLFRTLK-TRATGPVLIHALTKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE   D+ H  A+FD  TG Q K+++   SYT  FAE+LI +A  D+ +VA+ AAM  
Sbjct: 290 APAENRPDRGHATARFDVLTGAQVKAASNAPSYTKVFAESLIDQASRDEKIVAVTAAMPE 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP RCFDVGIAEQH VTF+AGLA  G+KPFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFAERFPRRCFDVGIAEQHGVTFSAGLAAGGMKPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH G+FD+ FMA LP MVVMA +DEA+L HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGAFDIGFMANLPGMVVMAAADEADLVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG G+GV++P   +G+PLE+GKGRI+ EG RVA+L +GT +   L A   L
Sbjct: 470 EGPIAFRYPRGEGMGVDMP--TQGVPLEIGKGRIISEGARVAILSFGTRLAEVLKAREAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KPLD  LI  L   HE LI +EEG++GGFGSHV QFL++ G+ D 
Sbjct: 528 AARGLAPTVADARFAKPLDKDLILRLVAEHEALICIEEGAVGGFGSHVAQFLSEQGVFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             K+R +VLPD +IDH +P D  A A +  + I A V ++LG
Sbjct: 588 GYKFRSMVLPDTFIDHANPEDMYAVARMNAADIEAKVLDLLG 629


>gi|146278825|ref|YP_001168984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145557066|gb|ABP71679.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 637

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/642 (57%), Positives = 463/642 (72%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P+ MK L+ REL+ LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPCTPTLDRVTLPVDMKGLTDRELRNLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GH
Sbjct: 62  LHAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA +G A  R+L G   + VA+IGDG+M+AG A+EA+N+ G+L + +IVILNDN 
Sbjct: 122 SSTSISAAVGFAAARELGGDTGDAVAIIGDGSMSAGMAFEALNHGGHLKNRVIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +  E 
Sbjct: 181 EMSIA--------PPVGALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +  G   TLFEELG  Y+GP+DGH++D L+ +L  VK  + + PVLIHV+T+KG+GY
Sbjct: 233 LKSVTVGG--TLFEELGFSYVGPIDGHDLDQLLPVLRTVKQ-RASAPVLIHVITKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A D+ H   KF+  TG Q K  +   SYT  FA++LI EAEVD+ + A+ AAM  
Sbjct: 290 APAEAARDRGHATNKFNVLTGAQVKPVSNAPSYTKVFAQSLIKEAEVDERICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP R FDVGIAEQHAVTF+AGLA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFADRFPKRIFDVGIAEQHAVTFSAGLAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F++ LP +VVMA +DEAEL HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GVE+P   KG+PL++G+GR++ EG R+ALL +GT +     A+  L
Sbjct: 470 EGPIAFRYPRGDGVGVEMPA--KGVPLQIGRGRVVSEGTRIALLSFGTRLSEVQVAAEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TVADARF KPLD  LI  LA  HE LIT+EEG+IGGFGSHV Q LA+ G+ D 
Sbjct: 528 AARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             ++R +VLPD +IDH S     A AGL  + I       LG
Sbjct: 588 GFRYRSMVLPDTFIDHNSAEAMYATAGLNAADIERKALETLG 629


>gi|346995044|ref|ZP_08863116.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TW15]
          Length = 642

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/648 (57%), Positives = 464/648 (71%), Gaps = 18/648 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +N P  +K  +  +L Q+A ELR++ +  VS TGGHLG+ LGV+ELT A
Sbjct: 2   SDRPNTPLLDLVNRPADLKQFTDAQLHQVAHELRSETVSAVSVTGGHLGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDVGHQ YPHKILT RRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L+  +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLNKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALS+ LSR+ +  P  +L+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSNYLSRIYAEEPFHDLKAAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFEELG  Y+GP+DGH++D L+ +L  VK  K TGP+LIHV+T+K
Sbjct: 233 AKDMLKGM--AMGGTLFEELGFSYLGPIDGHDLDQLLPVLRAVK-AKATGPILIHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A DK H  AKFD  TG+Q K+ +   SYT+ F + L+ EA  D  +VA+ A
Sbjct: 290 GKGYAPAEQARDKGHATAKFDVVTGEQKKAPSNAPSYTSVFGKTLVEEAARDDKIVAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDV IAEQH VTF+A LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERYPSRCFDVAIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ ++A LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAVDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELMHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
            A DD P  FRYPRG G+GV+LP   +G  LE+GKGRI+ +G RVALL +GT +     A
Sbjct: 470 VAYDDGPIAFRYPRGEGVGVDLP--ERGEVLEIGKGRIIQKGARVALLSFGTRLAEVQKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  LI  LA +HE LIT+EEG++GGFGSHV Q LA +G
Sbjct: 528 AEALSARGITPTIADARFAKPLDRDLILDLAANHEALITIEEGAVGGFGSHVAQLLADEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           + D  +K+R +VLPD +ID  SPAD  A AG+    I A V +ILG T
Sbjct: 588 VFDEGLKYRSMVLPDIFIDQASPADMYAVAGMDAEQIEAKVLSILGVT 635


>gi|408378647|ref|ZP_11176244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
 gi|407747784|gb|EKF59303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
          Length = 639

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/640 (58%), Positives = 464/640 (72%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD + +P  +K +  R+L QLA E+R ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PDTPLLDKVEFPKDLKAIEDRDLPQLAREVRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKR+ESEYD FG  HSST
Sbjct: 65  VFDTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTKRAESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV  +L      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAELSKTDRKVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     RE+ K +T  +G  +     +  E+ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRSYMGFRELGKKLTAYLGKTVDRAITRAVEHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T+FEELG Y+IGP+DGH+ + L+ +L  V++    GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TMFEELGFYHIGPIDGHSFEHLLPVLRNVRDN-AKGPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +YT  FA+AL+ EA  D+ +V I AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGTQAKAKPNAPAYTAVFADALVEEARHDEKIVGITAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV +Q 
Sbjct: 353 LDKLQTLFPERTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRGYDQVVHDVGIQG 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTGFLAALPGFVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GV +P   +G  LE+G+GRI+ +G +VALL +GT +  CL A+  L++ 
Sbjct: 473 ISFRYPRGEGVGVPMP--ERGEILEIGRGRIVKQGSKVALLSFGTRLADCLLAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLDH LIR LA+ H+V++TVEEG++GGFGSHV+ FL  +GLLD  +K
Sbjct: 531 GLSTTVADARFAKPLDHDLIRQLARHHQVVVTVEEGAVGGFGSHVMHFLVNEGLLDNGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R LVLPD ++D   P    A+AGL  S I  TVF  LGQ
Sbjct: 591 VRSLVLPDVWMDQAKPEVMYARAGLDASGILKTVFAALGQ 630


>gi|340030106|ref|ZP_08666169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus sp. TRP]
          Length = 641

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/645 (57%), Positives = 464/645 (71%), Gaps = 14/645 (2%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           + +  RP TP+LD +  P  +KNLS REL+QLADELRA+ I  VS TGGHLG+ LGV+EL
Sbjct: 4   DQNEHRPLTPVLDRVTLPSDLKNLSDRELRQLADELRAETISAVSVTGGHLGAGLGVVEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALH VF AP+D+I+WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG
Sbjct: 64  TVALHAVFEAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRMEGGLSGFTKRSESPYDPFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LG A+ R+L G   + VAVIGDGAM+AG A+EA+NNAG L   + V+LN
Sbjct: 124 AGHSSTSISAALGFAMARELGGDPGDAVAVIGDGAMSAGMAFEALNNAGDLGKRLFVVLN 183

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PP GALS  L+RL +  P ++L+ VAKG    +  P+ E A + 
Sbjct: 184 DN-EMSIA--------PPTGALSRYLTRLYAEGPFQDLKAVAKGAVGFLPQPLQEGARRA 234

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
            E  +GM  G   TLFEELG  YIGPVDGH++D L+ +L  V+  +  GPVLIHVVT KG
Sbjct: 235 KEMLKGMTVGG--TLFEELGFSYIGPVDGHDLDQLLPLLRTVR-ARADGPVLIHVVTRKG 291

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GY  AE+AADK H  AKFD  TG Q K+ +   SYT+ FA+AL+ EA  D  +VA+ AA
Sbjct: 292 KGYAPAERAADKGHATAKFDVQTGAQAKAKSNAPSYTSVFAKALVDEASRDARIVAVTAA 351

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGLNLF  RFP RCFDVGIAEQHAVTF+AGLA  G+KPFCA+YS+F+QR YDQ+VH
Sbjct: 352 MPDGTGLNLFAERFPRRCFDVGIAEQHAVTFSAGLAAGGMKPFCALYSTFLQRGYDQIVH 411

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q+LPVRFA+DRAGLVGADG TH G++D+ F++ LP MVVMA +DEAEL HMVATAA
Sbjct: 412 DVAIQRLPVRFAIDRAGLVGADGATHAGAYDIAFLSNLPGMVVMAAADEAELVHMVATAA 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
           A D  P  FRYPRG G GVE+P    G  LE+GKGR++ EG  VA+L +GT +   + A 
Sbjct: 472 AYDAGPIAFRYPRGEGTGVEMP--EHGEVLEIGKGRVVAEGRGVAILSFGTRLAEVMRAR 529

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
             L   G++ T+ DARF KPLD  LI  LA +HE LIT+EEG++GGFGS V Q L+ +G+
Sbjct: 530 EALLVRGIQPTIVDARFAKPLDRDLILRLACTHEALITIEEGAVGGFGSLVAQLLSDEGV 589

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            DG +++R +VLPD +IDH SP     +A ++   I A V  ILG
Sbjct: 590 FDGGLRFRQMVLPDTFIDHASPEAMYREARMSAPDIEAKVLEILG 634


>gi|393772959|ref|ZP_10361359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
           2-17]
 gi|392721698|gb|EIZ79163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
           2-17]
          Length = 640

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/640 (59%), Positives = 461/640 (72%), Gaps = 18/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+  P  ++ L   +L+QLADELR + I  V +TGGHLGS LGV+ELTVA+HY
Sbjct: 5   PATPLLDTVTNPTDLRRLKPAQLRQLADELREETISAVGQTGGHLGSGLGVVELTVAIHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSST
Sbjct: 65  VFNTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A+   L+G     +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 125 SISAALGFAIANKLQGTPGRGIAVIGDGAMSAGMAYEAMNNAAEAGNRLVVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LSS L+RL S+     LRE+A+   +++  P+H  A K DE+ARG
Sbjct: 184 IA--------PPVGGLSSYLARLVSSGQFLGLREMARKFARKLPRPLHVAAKKTDEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEELG YY+GP+DGH+++ LV +LE V++    GP+LIHVVT+KG+GY  A
Sbjct: 236 M--AMGGTLFEELGFYYVGPIDGHDLEALVPVLENVRDA-AEGPILIHVVTQKGKGYVPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+AADKYHGV KF+  TG+Q KS A   SYT  FA+ALIAEA+ D  + AI AAM  GTG
Sbjct: 293 EEAADKYHGVQKFNVVTGEQAKSPAGPPSYTGVFAKALIAEAQRDDRICAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRA+DQVVHDV +Q 
Sbjct: 353 LDKFGDLFPGRSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN+VVMA +DEAEL HMV TAA  D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMVHTAALHDSSP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
             FRYPRGNG+GV LP     +P  LE+GKGR++ EG +VA+L  GT +   L A+  LE
Sbjct: 473 IAFRYPRGNGVGVPLPQ----VPERLEIGKGRVVREGSKVAILSLGTRLAEALKAADTLE 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVAD RF KPLD  LIR L  +HEV++TVEEG+IGG G+HV+   + +GL D  
Sbjct: 529 AKGLSTTVADLRFAKPLDTDLIRRLMTTHEVVVTVEEGAIGGLGAHVLTLASDEGLTDAG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           +K R L LPD + D   P  Q  +AGL    I  TV   L
Sbjct: 589 LKIRTLRLPDVFQDQNKPEAQYDEAGLNAPQIVDTVLKAL 628


>gi|83951989|ref|ZP_00960721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
           ISM]
 gi|83836995|gb|EAP76292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
           ISM]
          Length = 621

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/629 (59%), Positives = 463/629 (73%), Gaps = 18/629 (2%)

Query: 89  LSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQT 148
           +S  EL+QLADELRA+ I  VS+TGGHLG+ LGV+ELTVALH VF+AP+D+I+WDV HQ 
Sbjct: 1   MSDAELRQLADELRAETISAVSQTGGHLGAGLGVVELTVALHAVFDAPRDKIIWDVSHQC 60

Query: 149 YPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR 208
           YPHKILTGRRD+M T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G 
Sbjct: 61  YPHKILTGRRDRMRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGA 120

Query: 209 KN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPV 264
                 + +AVIGDGAM+AG A+EAMNNAG+L   MIVILNDN ++S+         PPV
Sbjct: 121 SETGHGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRMIVILNDN-EMSIA--------PPV 171

Query: 265 GALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEEL 324
           GALSS LSRL +  P +EL+  AKG    + GP  E A +  +  +G+    G TLFEEL
Sbjct: 172 GALSSYLSRLYAEAPFQELKAAAKGAVSLLPGPFQEGAKRARDMLKGL--AVGGTLFEEL 229

Query: 325 GLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKF 384
           G  Y+GP+DGH++D L+ +L  V++ + TGP+LIHV+T+KG+GY  AE A D  H  AKF
Sbjct: 230 GFSYLGPIDGHDMDQLLPVLRTVQD-RATGPILIHVLTKKGKGYGPAEAARDGGHATAKF 288

Query: 385 DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCF 444
           D  TGKQ KS +   SYT  F++A++A A  D+ + A+ AAM  GTGL LF  R+P+RCF
Sbjct: 289 DVVTGKQKKSPSNAPSYTAVFSDAILAHAAEDQRICAVTAAMPDGTGLKLFEERYPSRCF 348

Query: 445 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLV 504
           DVGIAEQHAVTFAAGLA  GL+PFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLV
Sbjct: 349 DVGIAEQHAVTFAAGLAAGGLRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLV 408

Query: 505 GADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV 564
           GADG TH GS+DV F+A LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G+GV
Sbjct: 409 GADGATHAGSYDVAFLANLPGMVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGEGVGV 468

Query: 565 ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 624
           E+P  ++G+PLE+GKGRI+ EG+ VA+L +GT +     A+  L + G+  T+ADARF K
Sbjct: 469 EMP--DRGVPLEIGKGRIIQEGKGVAILSFGTRLGEVRRAAEALGARGITPTIADARFAK 526

Query: 625 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 684
           PLD  +I  LA  HE LIT+EEG++GGFGSHV Q L+++G+ D  +K+R +VLPD +ID 
Sbjct: 527 PLDRDMILDLAARHEALITIEEGAVGGFGSHVAQLLSEEGVFDHGLKFRQMVLPDIFIDQ 586

Query: 685 GSPADQLAQAGLTPSHIAATVFNILGQTR 713
            SP D    AGL+   I A V  +LG  R
Sbjct: 587 ASPEDMYRVAGLSAEDIEAKVLELLGVAR 615


>gi|414343119|ref|YP_006984640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
 gi|411028454|gb|AFW01709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
          Length = 660

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/652 (57%), Positives = 471/652 (72%), Gaps = 30/652 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+LD +  P  M+NLS+ +LKQLADELR++ +  VS TGGHLG+SLGV+ELTVALH VFN
Sbjct: 15  PVLDRVTLPSDMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSSTSIS
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 195 AGLGMAVGRDLKGRKN------NVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+  ++      NV+AVIGDG+++AG AYEAMNNA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S+ LSRL S+R    LR++A  V K++ G +   A + 
Sbjct: 195 DN-EMSI--------APPVGSMSNYLSRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRA 245

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPVDGH++  LV IL  +++    GP+L+H++TEKG
Sbjct: 246 EEYARGMITGG--TLFEELGFYYVGPVDGHDMTQLVPILRNLRDADDQGPILLHIITEKG 303

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH V+KF+  TG+Q K+ A   SYT+ F+  L+  A+ D  ++ + AA
Sbjct: 304 RGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSVFSRELLRRAKTDDKLITVTAA 363

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL  F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVH
Sbjct: 364 MPSGTGLTAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVH 423

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH GSFD+ ++ CLPNMVVMAPSDE EL H  ATA 
Sbjct: 424 DVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEIELLHATATAC 483

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER-------VALLGYGTAV 598
             D  P  FRYPRG+GIG+ELP   KG   E+GKGR++ E  +       VA+L  GT +
Sbjct: 484 EYDAGPIAFRYPRGSGIGLELP--EKGEVQEIGKGRVVRESRQVPGTRSGVAILSLGTRL 541

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
              L A+  L + G+ +TVADARF KP+D  L+  L   HEVLIT+EEG+IGGF S VVQ
Sbjct: 542 HESLRAADQLAAQGISVTVADARFAKPIDTKLVDDLVAQHEVLITLEEGAIGGFSSLVVQ 601

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LA+ G LD TVK+RP+ LPD+YIDH +P  Q  +AGLT  HI  T    LG
Sbjct: 602 HLAETGKLD-TVKFRPMALPDKYIDHNNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|410943439|ref|ZP_11375180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter frateurii
           NBRC 101659]
          Length = 660

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/652 (57%), Positives = 471/652 (72%), Gaps = 30/652 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+LD +  P  M+NLS+ +LKQLADELR++ +  VS TGGHLG+SLGV+ELTVALH VFN
Sbjct: 15  PVLDRVTLPSDMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSSTSIS
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 195 AGLGMAVGRDLKGRKN------NVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L   K+      NV+AVIGDG+++AG AYEAMNNA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLHAEKDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S+ LSRL S+R    LR++A  V K++ G +   A + 
Sbjct: 195 DN-EMSIA--------PPVGSMSNYLSRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRA 245

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPVDGH++  LV IL  +++    GP+L+H++TEKG
Sbjct: 246 EEYARGMITGG--TLFEELGFYYVGPVDGHDMSQLVPILRNLRDADDQGPILLHIITEKG 303

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH V+KF+  TG+Q K+ A   SYT+ F+  L+  A+ D  +V + AA
Sbjct: 304 RGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSVFSRELMRRAKTDDKLVTVTAA 363

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL  F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVH
Sbjct: 364 MPSGTGLTAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVH 423

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH GSFD+ ++ CLPNMVVMAPSDE EL H  ATA 
Sbjct: 424 DVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEIELLHATATAC 483

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER-------VALLGYGTAV 598
             D  P  FRYPRG+GIG++LP   KG  LE+GKGRI+ E  +       VA+L  GT +
Sbjct: 484 EYDAGPIAFRYPRGSGIGLDLP--EKGEVLEIGKGRIVRESRQAPGTRSGVAILSLGTRL 541

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
              L A+  L + G+ +TVADARF KP+D  L+  L   H+VLIT+EEG+IGGF S VVQ
Sbjct: 542 HESLRAADQLAAQGVAVTVADARFAKPIDTKLVDDLVAQHDVLITLEEGAIGGFSSLVVQ 601

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LA+ G LD TVK+RP+ LPD+YIDH +P  Q  +AGLT  HI  T    LG
Sbjct: 602 HLAETGKLD-TVKFRPMALPDKYIDHNNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|260425522|ref|ZP_05779502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
 gi|260423462|gb|EEX16712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
          Length = 641

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/646 (58%), Positives = 460/646 (71%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +  P TPLLD +  P  +K LS  EL+QLA ELRA+ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   THSPETPLLDRVITPADLKRLSDAELEQLAHELRAETIAAVSQTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES +D FG GH
Sbjct: 62  LHAVFDAPRDKIIWDVSHQAYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGAM+AG AYEAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVCDTGSGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PP GA+SS LSRL +  P ++L+  AKG    + GP  E A +
Sbjct: 182 NDN-EMSIA--------PPTGAMSSYLSRLYAEAPFQDLKAAAKGAVSLLPGPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  + M  G   TLFEELG  YIGP+DGH++  L+ IL  VK  + TGP+L+HV+T+K
Sbjct: 233 AKEVLKTMTVGG--TLFEELGFDYIGPLDGHDLHQLLPILRTVK-ARATGPILLHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE AAD+ H  AKFD  TG+Q KS +   SYT  FA  L   A  D  + A+ A
Sbjct: 290 GKGYAPAEGAADRGHARAKFDLVTGEQKKSPSNAPSYTKIFARELTRLAAEDSRICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+L   R+P+R FDVGIAEQH VTF+AGLA  GLKPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLDLMAERYPSRVFDVGIAEQHGVTFSAGLAAGGLKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ FMA LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDIAFMANLPGMVVMAAADEAELMHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D+ P  FRYPRG G GVE+P   KG PLE+G+GR++ EG R+A+L +GT +   + A
Sbjct: 470 AAHDEGPIAFRYPRGEGSGVEMP--EKGEPLEIGRGRLVREGARLAILSFGTRLSEVMKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              L + G+  TVADARF KPLD  LI  LA  HE LIT+EEGS+GGFGSHVVQ L+++G
Sbjct: 528 CERLSARGISPTVADARFAKPLDRELILKLAAEHEALITIEEGSVGGFGSHVVQLLSEEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LD  +K+R +VLPD +IDH SP D    AGL   HI   V   LG
Sbjct: 588 ALDHGLKFRSMVLPDTFIDHASPNDMYEAAGLDARHIEEKVLTTLG 633


>gi|67906635|gb|AAY82730.1| predicted 1-deoxy-d-xylulose-5-phosphate synthase [uncultured
           bacterium eBACmed86H08]
          Length = 635

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/634 (55%), Positives = 459/634 (72%), Gaps = 14/634 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            LD +N+P  +KN    EL  L+ ELR ++I  VS TGGHLG+ LGVIELTVALHYVF+ 
Sbjct: 6   FLDNVNFPSDIKNFKSSELIALSKELREELIEAVSFTGGHLGAGLGVIELTVALHYVFDT 65

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+I+WDVGHQ+YPHKILTGR++++ T+RQ DGLSGFTKRSESEYD FG  HSSTSISA
Sbjct: 66  PNDKIVWDVGHQSYPHKILTGRKNRIKTLRQGDGLSGFTKRSESEYDPFGAAHSSTSISA 125

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+A    L  +  NVVAVIGDGA++AG AYEAMNNAG   + MIVILNDN  +S+   
Sbjct: 126 ALGIATANKLSKKSENVVAVIGDGAISAGMAYEAMNNAGTSKTKMIVILNDN-DMSIA-- 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGA+ S L++L + +    LRE  K +         + A K +++ R  ++G
Sbjct: 183 ------EPVGAMRSYLAKLLTGKIYFSLRETFKLIISAFSKRFSKKAGKAEDFLRSAVTG 236

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLF  LG YY+GP+DGH++D LV++L+  K+T   GP++IHV TEKG+GY +AE + 
Sbjct: 237 G--TLFNSLGFYYVGPIDGHDIDTLVSVLKNAKDTNFEGPIMIHVKTEKGKGYQFAENSK 294

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DKYHGV+KF+  TG Q KSS++  SYT+ FA  LI  AE D  ++ I AAM  GTG++LF
Sbjct: 295 DKYHGVSKFNVQTGVQEKSSSKIPSYTSVFANTLIKHAERDSKIIGITAAMPSGTGMDLF 354

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            ++FP R FDVGIAEQHAVTF+AGLA EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVR
Sbjct: 355 AKKFPNRMFDVGIAEQHAVTFSAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVR 414

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH GSFD+T+++ LPN VVMAPSDE+EL  M+ T+  I+D+PS FR
Sbjct: 415 FAIDRAGLVGADGPTHAGSFDITYLSTLPNFVVMAPSDESELVKMINTSVDINDKPSAFR 474

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG GIG++LP  N+ I  E+GKGR++ EG+ +AL+ +G  +Q C  A   LE  GL L
Sbjct: 475 YPRGTGIGIKLPEINEKI--EIGKGRVIKEGKEIALINFGARLQECQKALNNLEKKGLNL 532

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           T+ DARFCKPLD  L+ + AK+HEV+I++EEGSIGGFGSH+ +FL++ GLL+  +K+R +
Sbjct: 533 TLIDARFCKPLDENLMWNTAKNHEVVISIEEGSIGGFGSHLSKFLSEKGLLE-KIKFRSM 591

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
             PD++ID   P      AGL    I   V+ +L
Sbjct: 592 TFPDKFIDQDKPDLMYQIAGLDSKAIEEKVYEVL 625


>gi|119383154|ref|YP_914210.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
           PD1222]
 gi|119372921|gb|ABL68514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
           PD1222]
          Length = 640

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/642 (57%), Positives = 466/642 (72%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TP+LD ++ P  +K+L+ REL+QLADELRA+ +  VS TGGHLG+ LGV+ELTVA
Sbjct: 6   SDRPSTPILDRVHLPSDLKDLTDRELRQLADELRAETVSAVSVTGGHLGAGLGVVELTVA 65

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG GH
Sbjct: 66  LHAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRMEGGLSGFTKRSESPYDPFGAGH 125

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+ R+L G   + +AVIGDGAM+AG A+EA+NNAG L   + V+LNDN 
Sbjct: 126 SSTSISAALGFAMARELGGDPGDAIAVIGDGAMSAGMAFEALNNAGDLGKRLFVVLNDN- 184

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PP GALS  L+RL +  P ++L+ VAKG    +   + E A +  E 
Sbjct: 185 EMSIA--------PPTGALSRYLTRLYAEGPFQDLKAVAKGAVGFLPPTLQEGARRAKEM 236

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            +GM  G   TLFEELG  YIGPVDGH++D L+ +L  VK  + TGPVL+HVVT KG+GY
Sbjct: 237 LKGMTVGG--TLFEELGFSYIGPVDGHDLDQLLPLLRTVK-ARATGPVLLHVVTRKGKGY 293

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE+AADK H  AKFD  TG Q K+ +   SYT+ FA AL+ +A  D  +VA+ AAM  
Sbjct: 294 GPAERAADKGHATAKFDVETGAQAKAKSNAPSYTSVFARALVDQASRDARIVAVTAAMPD 353

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNL   RFP RCFDVGIAEQHAVTF+AGLA  G+KPFCA+YS+F+QR YDQVVHDV 
Sbjct: 354 GTGLNLMAERFPRRCFDVGIAEQHAVTFSAGLAAGGMKPFCALYSTFLQRGYDQVVHDVA 413

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH G++DV F+A LP MVVMA +DEAEL HMVATAAA D
Sbjct: 414 IQRLPVRFAIDRAGLVGADGATHAGAYDVAFLANLPGMVVMAAADEAELVHMVATAAAHD 473

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG G GVE+P   +G  L +GKGR++ EG+ VA+L +GT +   + A   L
Sbjct: 474 EGPIAFRYPRGEGTGVEMP--ERGEVLVIGKGRVMAEGKGVAILSFGTRLSEVMRARESL 531

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TV DARF KPLD  LI  LA++HE LIT+EEG++GGFGS V Q LA +G+ DG
Sbjct: 532 AARGVSPTVVDARFAKPLDRDLILRLARTHEALITIEEGAVGGFGSLVAQLLADEGVFDG 591

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +++R +VLPD +IDH SP     +A ++   I A V  +LG
Sbjct: 592 GLRFRQMVLPDTFIDHASPEAMYREARMSAPDIEAKVLEVLG 633


>gi|254438285|ref|ZP_05051779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
           307]
 gi|198253731|gb|EDY78045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
           307]
          Length = 630

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/637 (58%), Positives = 461/637 (72%), Gaps = 16/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I+ P  M  LS  +L++LADELRA+ I  VS+TGGHLG+ LGV+ELTVALH VF
Sbjct: 2   TPLLDQIDLPSDMNGLSDAQLRRLADELRAETISTVSETGGHLGAGLGVVELTVALHAVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +APKD+I+WDV HQTYPHKILTGRRD++ T+RQ DGLSGFTKRSES YDCFG  HSSTSI
Sbjct: 62  DAPKDKIVWDVSHQTYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG AV RDL G   + +AVIGDGAM+AG AYEA+NNAG+L   +IVILNDN ++S+ 
Sbjct: 122 SAALGFAVARDLGGEGGDAIAVIGDGAMSAGMAYEALNNAGHLKKRLIVILNDN-EMSIA 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS LSRL +  P +E +  AKG    +  P+ E A +  +  + M 
Sbjct: 181 --------PPVGAMSSYLSRLYAGDPFQEFKAAAKGAVSFLPEPLQEGARRAKDMLKHMT 232

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G   TLFEELG  Y+GP+DGH+++ L+++L  VK  + TGP+LIHV+T+KG+GY  AE 
Sbjct: 233 VGG--TLFEELGFSYLGPIDGHDMEQLLSVLRTVK-IRATGPILIHVITKKGKGY--AEN 287

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
            AD+ H  AKFD  TG+Q K+ +   SYT+ FAE+LI  A  D  +VA+ AAM  GTGL+
Sbjct: 288 RADRGHATAKFDVVTGEQKKTPSNAPSYTSVFAESLIKHATKDDKIVAVTAAMPDGTGLD 347

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F+ RF +RCFDVGIAEQH VTF AGLA  G+KPFC IYS+F+QR YDQ+VHDV +Q+LP
Sbjct: 348 RFMSRFASRCFDVGIAEQHGVTFCAGLAAGGMKPFCTIYSTFLQRGYDQIVHDVAIQRLP 407

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDV F+A LP  VVMA +DEAEL  MVATA A D  P  
Sbjct: 408 VRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVMAAADEAELTRMVATAVAHDSGPIA 467

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG G+GVE+P  +   PLE+GKGR++  G RVA+L +GT +Q    A   L + G+
Sbjct: 468 FRFPRGEGVGVEIP--DDAQPLEIGKGRMIRAGARVAILSFGTRLQEIEKACEALATRGI 525

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  +I  LA+ HE LITVEEG+IGGFGSHV Q LA++G+ D  +K+R
Sbjct: 526 TPTVADARFAKPLDRDMILGLARDHEALITVEEGAIGGFGSHVAQLLAEEGVFDHGLKFR 585

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +VLPD +ID   P +    AG+   HI   V ++LG
Sbjct: 586 SMVLPDVFIDQAGPREMYEVAGMNAEHIETKVLHVLG 622


>gi|418054734|ref|ZP_12692790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353212359|gb|EHB77759.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 647

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/636 (58%), Positives = 466/636 (73%), Gaps = 14/636 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +N P  ++ L+  +L QLA ELR + I  VS TGGHLG+ LGV+ELTVALHY+F
Sbjct: 11  TPLLDRVNTPDDLRKLTESDLPQLAAELRTETIDAVSVTGGHLGAGLGVVELTVALHYLF 70

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDV HQTYPHKILT RRD++ T+RQ +GLSGFTKR+ESEYD FG  HSSTSI
Sbjct: 71  DTPRDRLIWDVSHQTYPHKILTARRDRIRTLRQANGLSGFTKRTESEYDPFGAAHSSTSI 130

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV RD+ G  NNVV VIGDGAM+AG AYEA+NNAG  +  +IV+LNDN  +S+ 
Sbjct: 131 SAGLGMAVARDMSGGDNNVVCVIGDGAMSAGMAYEALNNAGARNERLIVVLNDN-DMSIA 189

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALSS L+R  S+    ++R++AK + +++       AA+++EY R + 
Sbjct: 190 --------PPTGALSSYLARTTSSASYFKVRDIAKQLAQRLPKSWERRAARMEEYTRNLW 241

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G     FEELG YY+GP+DGH++  L+ +L+ V++ K  GP+L+HV+T+KG+GY  AE 
Sbjct: 242 QGGA--WFEELGFYYVGPIDGHDLGQLLPVLKNVRDAKH-GPILVHVMTKKGKGYAPAEA 298

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           + DKYHGVAKF+  TG Q K  A   SYT  FA++LI EA+ D  +VAI AAM  GTGL+
Sbjct: 299 SPDKYHGVAKFNVVTGVQVKPQAAAPSYTRVFADSLIQEAKKDPKIVAITAAMPDGTGLD 358

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F R FP R FDVGIAEQHAVTFAAGLA EG+KPF AIYS+F+QR YDQVVHDV +Q LP
Sbjct: 359 VFGREFPDRTFDVGIAEQHAVTFAAGLATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLP 418

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAG VGADG TH GSFD+ ++ CLPN V+MA +DEAEL HMVATA +IDDRPS 
Sbjct: 419 VRFAIDRAGFVGADGATHAGSFDLAYLGCLPNFVIMAAADEAELKHMVATAVSIDDRPSA 478

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G GV +P   + +P  +GKGRIL EG  VALL  GT +   + A+  L + GL
Sbjct: 479 FRYPRGEGTGVAMPEVGEVLP--IGKGRILREGSTVALLSIGTRLGEAMKAADQLAALGL 536

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  LIR LA++HEVL+T+EEGS+GGFGSHV+Q+LA +GLL+  +K R
Sbjct: 537 STTVADARFMKPLDTDLIRQLAQNHEVLVTIEEGSVGGFGSHVLQYLADNGLLEHGLKVR 596

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
             V+PD ++D   P     +AGL+   I  TV + L
Sbjct: 597 AKVMPDCFVDQDKPEAMYQKAGLSAGGIVETVRDAL 632


>gi|56695164|ref|YP_165511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|81350903|sp|Q5LX42.1|DXS_SILPO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56676901|gb|AAV93567.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 642

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/649 (57%), Positives = 464/649 (71%), Gaps = 18/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +  P  +K  S  +L QLA ELRA+ +  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPHTPLLDQVTRPADLKRFSDAQLTQLAGELRAETVSAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+++WDVGHQ YPHKILT RRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDTPRDKVIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALS+ LSRL +  P +EL+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSNYLSRLYAEEPFQELKAAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +GM    G TLFEELG  YIGP+DGH++  L+ +L  VK  + TGP+L+HV+T+K
Sbjct: 233 AKEMLKGM--AVGGTLFEELGFSYIGPIDGHDMGQLLPVLRTVK-ARATGPILLHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A D+ H  AKFD  TG+Q K+ +   SYT  F +AL+ +A  D  +VA+ A
Sbjct: 290 GKGYAPAERARDRGHATAKFDVVTGEQKKAPSNAPSYTAVFGKALVDQAARDDKIVAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDVGIAEQH VTF+A LA  GLKPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ ++A LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G+GVE+P    G  LE+GKGR++ +G RVALL +GT +     A
Sbjct: 470 AAHDDGPIAFRYPRGEGVGVEMP--ELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  LI +LA  HE LIT+EEG++GGFGSHV Q LA +G
Sbjct: 528 AEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           + D  +K+R +VLPD +ID  SPAD  A AG+    I A V ++LG  R
Sbjct: 588 VFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLGIGR 636


>gi|418296460|ref|ZP_12908303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355538635|gb|EHH07877.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 639

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/640 (58%), Positives = 468/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 65  VFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L      V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D  ++ + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  LE+GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 473 ISFRYPRGEGVGVEMPA--RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 591 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|417859093|ref|ZP_12504150.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
           F2]
 gi|338825097|gb|EGP59064.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
           F2]
          Length = 636

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/640 (58%), Positives = 468/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VSKTGGHLG+ LGV+ELT+A+H 
Sbjct: 2   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHK 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 62  VFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L      V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 122 SISAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 181 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 233 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D  ++ + AAM  GTG
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 350 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  LE+GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 470 ISFRYPRGEGVGVEMPA--RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 528 GLSTTVADARFAKPLDLDLIRQLASHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 587

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 588 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 627


>gi|304321304|ref|YP_003854947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
           HTCC2503]
 gi|303300206|gb|ADM09805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
           HTCC2503]
          Length = 638

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/635 (59%), Positives = 457/635 (71%), Gaps = 16/635 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +  P  ++ L   +L Q ADELRA+VI  VS TGGHLG+ LGV+ELT ALHYVF
Sbjct: 5   TPLLDKVTLPQDLRALERSQLTQFADELRAEVIDAVSVTGGHLGAGLGVVELTTALHYVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D+I+WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKR+ESEYD FG  H++TSI
Sbjct: 65  DTPTDKIIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRTESEYDPFGAAHAATSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV RDL+G  N VVAVIGDG+M+AG AYEAMNNAG     + VILNDN  +S+ 
Sbjct: 125 SAALGMAVARDLRGDVNRVVAVIGDGSMSAGMAYEAMNNAGDRGKQLTVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S+ L+R+ S+      R +AK + K++   ++  A K +EY R  +
Sbjct: 184 --------PPVGAMSAYLARVASSDKYHAFRNLAKQLAKRLPKGLYTSAEKFEEYGRAFV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T+FEELG YY+GP+DGHN+D LV +LE V+   T  PV++HVVT+KG+GY  AE 
Sbjct: 236 TGG--TMFEELGFYYVGPIDGHNLDHLVPVLENVREL-TDAPVMVHVVTQKGKGYAPAES 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGVAKFD  +GKQ K      SYT+ FA  LI EAE D+ VV I AAM  GTG++
Sbjct: 293 AADKYHGVAKFDVVSGKQHKPKPAAPSYTSVFAGQLIKEAERDERVVGITAAMPSGTGID 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F+ RFP R FDVGIAEQHAVTFAAGLA EG+ PF AIYS+F+QRAYD VVHDV LQ LP
Sbjct: 353 KFMERFPDRTFDVGIAEQHAVTFAAGLAAEGMVPFAAIYSTFLQRAYDSVVHDVALQNLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH G+FD+ ++ CLPNMV+MA  DEAEL HM  TAAA D+ P  
Sbjct: 413 VRFALDRAGLVGADGATHAGAFDIAYLGCLPNMVLMAAGDEAELVHMTHTAAAFDEHPIA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG G G+ELP   +   LE+G+GRIL EG +VAL+ YG  +  CL A+ LL   GL
Sbjct: 473 FRFPRGEGQGLELPLTPQ--LLEIGRGRILREGAKVALIAYGGRLAECLKAADLLGMRGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TV DARF KPLD  LI  +A  HEV++TVEEGS+GGFG+ V+ FLA+ G LD  +K R
Sbjct: 531 STTVVDARFAKPLDEDLIARVAADHEVVLTVEEGSMGGFGAAVLHFLARIGQLDKGLKIR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHI--AATVF 706
            L LPD Y D   PAD  A+A L   +I  AA VF
Sbjct: 591 TLTLPDTYQDQAKPADMYAEAKLQAENIADAAIVF 625


>gi|357032439|ref|ZP_09094377.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
           G707]
 gi|356413976|gb|EHH67625.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
           G707]
          Length = 660

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/652 (58%), Positives = 470/652 (72%), Gaps = 30/652 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ +  VS TGGHLG+SLGV+ELTVALH VFN
Sbjct: 15  PELDRVRLPSDMRNLSVDQLKQLAEELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R ESEYD FG  HSSTSIS
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPNGLSGFTRRVESEYDPFGAAHSSTSIS 134

Query: 195 AGLGMAVGRDLKGRKN------NVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+  ++      NV+AVIGDG+++AG AYEAMNNA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S  LSRL S+R    LR++A  V K++ G +   A + 
Sbjct: 195 DN-EMSI--------APPVGSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRA 245

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPV+GH++  LV IL  +++    GP+L+HV+TEKG
Sbjct: 246 EEYARGMITGG--TLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHVITEKG 303

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH V+KF+  TG+Q K+ A   SYT+ F+  L+  AE D  ++ I AA
Sbjct: 304 RGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSVFSRELMRRAETDDKLITITAA 363

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL  F +  P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVH
Sbjct: 364 MPSGTGLGAFAKAHPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVH 423

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH GSFD+ ++ CLPNMVVMAPSDE EL H  ATA 
Sbjct: 424 DVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEVELLHATATAC 483

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GER--VALLGYGTAV 598
             D  P  FRYPRG+GIG++LP   KG  LE+GKGRI+ E     GER  VA+L  G  +
Sbjct: 484 EHDSGPIAFRYPRGSGIGLDLP--EKGEVLEIGKGRIVREARQAPGERGGVAILSLGPRL 541

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
              L A+  L + G+ +TVADARF KP+DH L+  LA+ HEV IT+EEG+ GGF S VV 
Sbjct: 542 HESLKAADQLAAQGIPVTVADARFAKPIDHKLVDDLARKHEVFITLEEGAAGGFSSQVVS 601

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LA++GLLD TVK+RP+  PDRYIDH +   Q  +AGLT  HI  T  + LG
Sbjct: 602 HLAKNGLLD-TVKFRPMAFPDRYIDHNTQDAQYDEAGLTAPHIVHTAASALG 652


>gi|399060904|ref|ZP_10745823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
 gi|398036847|gb|EJL30055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
          Length = 640

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/638 (58%), Positives = 461/638 (72%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +  P  ++ L   +L+QLADELRA++I  V +TGGHLGS LGV+ELTVA+HY
Sbjct: 5   PATPLLDEVPTPEDLRKLKPAQLRQLADELRAEMISAVGQTGGHLGSGLGVVELTVAIHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFTKRSESEYD FGT HSST
Sbjct: 65  VFDTPADRLIWDVGHQAYPHKILTGRRERIRTLRQGGGLSGFTKRSESEYDPFGTAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A+   +KG     +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 125 SISAALGFAIANKIKGTPGRGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L+RL S+     LRE+A+   +++  P+H  A K DE+ARG
Sbjct: 184 I--------APPVGGLSAYLARLVSSGQFLGLRELARKFARRLPRPLHVAAKKTDEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEELG YY+GP+DGH++D LV +LE V++    GP+L+HVVT+KG+GY  A
Sbjct: 236 M--AMGGTLFEELGFYYVGPIDGHDLDALVPVLENVRDAGE-GPILVHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG+Q K+ A   SYT  FA+AL AEAE D  + AI AAM  GTG
Sbjct: 293 ENAADKYHGVQKFDVITGEQAKAPAGPPSYTGVFAKALTAEAERDPTICAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F  +FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRA+DQVVHDV +Q 
Sbjct: 353 LDKFSAQFPERSFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAFDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMA +DE EL HMV TAA  D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAAADEVELVHMVHTAALHDAGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRGNG+G+ELP   +   L +GKGR++ EG +VA+L  GT +   L A+  LE+ 
Sbjct: 473 IAFRYPRGNGVGLELPATPE--QLAIGKGRVVREGSKVAILSLGTRLGEALKAADQLEAR 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  SHEV++TVEEGSIGG G+HV+   + +GL D  +K
Sbjct: 531 GLSTTVADLRFAKPLDTDLIRRLMLSHEVIVTVEEGSIGGLGAHVLTMASDEGLTDAGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + DH  P  Q  +AGL    I  TV   L
Sbjct: 591 IRTMRLPDVFQDHDKPETQYDEAGLNAPQIVDTVLKAL 628


>gi|112950411|gb|ABI26724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
          Length = 639

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/640 (58%), Positives = 468/640 (73%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VS+TGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSRTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 65  VFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L      V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D  ++ + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  LE+GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 473 ISFRYPRGEGVGVEMPA--RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 591 VRTLTLPDQWVEQAKPGTMYANAGLDRAGIVSTVFNALGQ 630


>gi|254449568|ref|ZP_05063005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
           238]
 gi|198263974|gb|EDY88244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
           238]
          Length = 626

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/634 (57%), Positives = 460/634 (72%), Gaps = 16/634 (2%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           +D I+ P  +  LS  +L+ LADELRA+ I  VS+TGGHLG+ LGV+ELTVALH VF+AP
Sbjct: 1   MDQIDLPSDLNGLSDLQLRTLADELRAETISAVSETGGHLGAGLGVVELTVALHAVFDAP 60

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           KD+I+WDV HQTYPHKILTGRRD + T+RQ DGLSGFTKRSES YDCFG  HSSTSISA 
Sbjct: 61  KDKIVWDVSHQTYPHKILTGRRDGIRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAA 120

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTAT 256
           LG AV RDL G   + +AVIGDGAM+AG AYEA+NNAG+L   +IVILNDN ++S+    
Sbjct: 121 LGFAVARDLGGEGGDAIAVIGDGAMSAGMAYEALNNAGHLKKRLIVILNDN-EMSIA--- 176

Query: 257 LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGS 316
                PPVGA+SS LSRL +  P +E +  AKG    + GP+ E A +  +  + M  G 
Sbjct: 177 -----PPVGAMSSYLSRLYAGDPFQEFKAAAKGAVSFLPGPLQEGARRAKDMLKHMTVGG 231

Query: 317 GSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAAD 376
             TLFEELG  Y+GP+DGH+++ L+++L  VK T+ TGP+LIH +T+KG+GY  AE  AD
Sbjct: 232 --TLFEELGFSYLGPIDGHDMEQLLSVLRTVK-TRATGPILIHAITKKGKGY--AENRAD 286

Query: 377 KYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFL 436
           + H  AKFD  TG+Q K+ +   SYT+ FAE+LI +A  D  +VA+ AAM  GTGL+ F+
Sbjct: 287 RGHATAKFDVVTGEQKKTPSNAPSYTSVFAESLIKQATKDDKIVAVTAAMPDGTGLDRFM 346

Query: 437 RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRF 496
            RF +RCFDVGIAEQHAVTF AGLA  G+KPFC IYS+F+QR YDQ+VHDV +Q+LPVRF
Sbjct: 347 SRFASRCFDVGIAEQHAVTFCAGLAAGGMKPFCTIYSTFLQRGYDQIVHDVAIQRLPVRF 406

Query: 497 AMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRY 556
           A+DRAGLVGADG TH GSFDV F+A LP  VVMA +DEAEL  MVATA A D  P  FR+
Sbjct: 407 AIDRAGLVGADGATHAGSFDVAFLANLPGFVVMAAADEAELTRMVATAVAHDSGPIAFRF 466

Query: 557 PRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLT 616
           PRG G+GVE+P  +   PLE+GKGR++ EG RVA+L +GT +Q    A   L + G+  T
Sbjct: 467 PRGEGVGVEIP--DDAQPLEIGKGRMIREGSRVAILSFGTRLQEVEKACEALAAKGITPT 524

Query: 617 VADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLV 676
           VADARF KPLD  +I  LA+ HE LITVEEG++GGFGSHV Q LA++G+ D  +K+R +V
Sbjct: 525 VADARFVKPLDREMILGLARDHEALITVEEGAVGGFGSHVAQLLAEEGVFDHGLKFRSMV 584

Query: 677 LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            PD +ID   P +    AG+   HI A V ++LG
Sbjct: 585 FPDIFIDQAGPREMYEVAGMNAEHIEAKVLDVLG 618


>gi|37903541|gb|AAP56243.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
          Length = 639

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/640 (58%), Positives = 467/640 (72%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VS TGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSSTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 65  VFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L      V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAGLDESDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D  +V + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIVGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP+R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA +DEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  LE+GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 473 ISFRYPRGEGVGVEMPA--RGEILEIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD++++   P    A AGL  + I +TVFN LGQ
Sbjct: 591 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|344923787|ref|ZP_08777248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Odyssella
           thessalonicensis L13]
          Length = 637

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/628 (58%), Positives = 461/628 (73%), Gaps = 13/628 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +N+P  +KN    +LKQLA+E+R + I  VSKTGGHLG+SLGV+ELTVALHYVF
Sbjct: 4   TPLLDQVNFPQDIKNFDGHQLKQLAEEVRRETIDIVSKTGGHLGASLGVVELTVALHYVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D+++WDVGHQ+YPHKILTGRR  M  +RQ  G SGFTKRSES YD FG  H+ TSI
Sbjct: 64  DTPNDKLIWDVGHQSYPHKILTGRRATMSKLRQKGGPSGFTKRSESIYDPFGAAHAGTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG AV  ++  + ++ +AVIGDG+M++G AYEAMNNAG L S ++VILNDN  +S+ 
Sbjct: 124 SAALGFAVASEMNKKHHHSIAVIGDGSMSSGMAYEAMNNAGALKSRLVVILNDN-DMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S   SRL S+RP + LR +AK V   +  P+   A +V+EYARG++
Sbjct: 183 --------PPVGAMSHYFSRLISSRPYQSLRSMAKEVASHLPKPLETAARRVEEYARGIV 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T FEE+G +Y+GP+DGH++D L+ +LE +++ K  GPVLIH+VT+KGRGY  AE 
Sbjct: 235 AGG--TWFEEMGFFYVGPIDGHDLDHLIPVLENIRDRKEDGPVLIHIVTQKGRGYAPAEA 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGV KFD ATG+Q K+   + SYT  FAE L   A  D  +VAI AAM  GTGL+
Sbjct: 293 AADKYHGVVKFDVATGQQQKTEVSSPSYTKVFAETLTELARQDDKIVAITAAMPTGTGLD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF R FP RCFDVGIAEQHAVTFAAGLAC+GLKPF AIYS+F+QR +DQVVHDV LQ LP
Sbjct: 353 LFAREFPGRCFDVGIAEQHAVTFAAGLACDGLKPFTAIYSTFLQRGFDQVVHDVMLQNLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAG VGADG TH GS+D+ F+ CLP M++MAPSDE EL H V TA AI+D P  
Sbjct: 413 VRFALDRAGFVGADGATHAGSYDLAFLGCLPQMIIMAPSDELELKHAVTTAHAIEDGPCA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRGNG+G++L     G  LE+GKGRI+ EG ++A+L  G  +Q  L A+ALL   GL
Sbjct: 473 FRYPRGNGVGLDLR--QPGKILEIGKGRIIQEGNQIAILSLGCRLQESLKAAALLAELGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
            +TVADARF KP+D  L+  LA+ HEVL+TVE GSIGGF + V   L Q+ LLD  +K+R
Sbjct: 531 SVTVADARFAKPVDMNLVIQLAQHHEVLLTVEAGSIGGFATQVTDVLVQNWLLDKGLKFR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHI 701
            L +PDR  DH +P  Q  +AGLT  HI
Sbjct: 591 TLYMPDRLFDHDTPNSQYEEAGLTAHHI 618


>gi|383642490|ref|ZP_09954896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas elodea ATCC
           31461]
          Length = 641

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/640 (58%), Positives = 460/640 (71%), Gaps = 18/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P  ++ L+  +L+QLADELRA+ I  V  TGGHLGS LGV+ELTVA+HY
Sbjct: 5   PKTPLLDTVDTPQDLRKLAPAQLRQLADELRAETISAVGSTGGHLGSGLGVVELTVAIHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFTKRSESE+D FG  HSST
Sbjct: 65  VFNTPDDRLIWDVGHQCYPHKILTGRRNRIRTIRQGGGLSGFTKRSESEFDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A    LKG     +AVIGDGAM+AG AYEAMNNA    + +IVILNDN  +S
Sbjct: 125 SISAALGFATANKLKGAPGKAIAVIGDGAMSAGMAYEAMNNAEAAGNRLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L+RL S+     LR +A+ VT+++   +   A K +E+ARG
Sbjct: 184 IA--------PPVGGLSAYLARLISSSEYLGLRSLARRVTQKVSRRLTAAAGKAEEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M   +G TLFEELG YY+GP+DGHN++ L+ +LE V++ +  GP+L+HVVT+KG+GY  A
Sbjct: 236 M--ATGGTLFEELGFYYVGPIDGHNLEHLIPVLENVRDAEQ-GPILVHVVTKKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EKAADKYHGV KFD  TG Q K+     +YT  FA+AL+AEAE D  V AI AAM  GTG
Sbjct: 293 EKAADKYHGVQKFDVITGAQAKAPPGPPAYTKVFADALLAEAERDATVCAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q 
Sbjct: 353 LDKFQAMFPERTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DE EL HM  TAA  D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLASLPNFVVMAAADEVELVHMTHTAALHDSGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
              RYPRGNGIG+ELP     +P  LE+GKGR++ EG++VA+L  GT +   L A+  LE
Sbjct: 473 IALRYPRGNGIGLELPK----VPERLEIGKGRVVREGKKVAILSLGTRLAEALKAADTLE 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  TVAD RF KPLD  LIR L  +HEV +T+EEG+IGG G+HV+   +  GL+D  
Sbjct: 529 AKGLSTTVADLRFAKPLDEDLIRRLLTTHEVAVTIEEGAIGGLGAHVLTLASDTGLIDAG 588

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           +K R + LPD + D   P  Q  +AGL  +HI  TV   L
Sbjct: 589 LKLRTMRLPDMFQDQDKPEKQYDEAGLNAAHIVDTVLKAL 628


>gi|440225750|ref|YP_007332841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
           899]
 gi|440037261|gb|AGB70295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
           899]
          Length = 638

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/645 (58%), Positives = 466/645 (72%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +Q P TPLLD + YP  ++ L  REL QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   TQMPETPLLDRVQYPSDLRKLEDRELPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VFN P DR+++DVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  H
Sbjct: 62  IHSVFNTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQENGLSGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  +L      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVAAELDNADRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R+  K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKKVDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ + L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFEHLLPVLRNVRD-NAQGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K      SYT+ FA+AL+ EA +D  +V I AAM  
Sbjct: 290 APAEAAADKYHGVNKFDVITGAQTKVKPNAPSYTSVFADALVQEATLDDKIVGITAAMPN 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLQEIFPKRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TAAA D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+GV+LP   +G  LE+GKGR++ +G +VALL +GT +   LAA+  L
Sbjct: 470 LGPISFRYPRGEGVGVDLP--ERGQILEIGKGRVIKQGTKVALLSFGTRLADSLAAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA  HE+LIT+EEGS+GGFGS V+QFLA +GLLD 
Sbjct: 528 DAAGLSTTVADARFAKPLDHDLIRQLAAHHEILITIEEGSVGGFGSQVMQFLANEGLLDS 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +K R LV+PD +++   P    A AGL  + I  TVF  LG+ R
Sbjct: 588 GLKIRSLVMPDIWMEQAKPEAMNAMAGLDRAGIVQTVFRALGRGR 632


>gi|453330452|dbj|GAC87680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter thailandicus
           NBRC 3255]
          Length = 660

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/652 (57%), Positives = 471/652 (72%), Gaps = 30/652 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+LD +  P  M+NLS+ +LKQLADELR++ +  VS TGGHLG+SLGV+ELTVALH VFN
Sbjct: 15  PVLDRVTLPSDMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQ YPHKILTGRRD++ T+RQ +GLSGFT+R+ESEYD FG  HSSTSIS
Sbjct: 75  TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134

Query: 195 AGLGMAVGRDLKGRKN------NVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+  ++      NV+AVIGDG+++AG AYEAMNNA   G   + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S+ LSRL S+R    LR++A  V K++ G +   A + 
Sbjct: 195 DN-EMSI--------APPVGSMSNYLSRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRA 245

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPVDGH++  LV IL  +++    GP+L+H++TEKG
Sbjct: 246 EEYARGMITGG--TLFEELGFYYVGPVDGHDMTQLVPILRNLRDADDQGPILLHIITEKG 303

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH V+KF+  TG+Q K+ A   SYT+ F+  L+  A+ D  ++ + AA
Sbjct: 304 RGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSVFSRELLRRAKTDDKLITVTAA 363

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL  F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVH
Sbjct: 364 MPSGTGLTAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVH 423

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH GSFD+ ++ CLPNMVVMAPSDE EL H  ATA 
Sbjct: 424 DVALQNLPVRFAIDRAGLVGADGATHAGSFDLNYLCCLPNMVVMAPSDEIELLHATATAC 483

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER-------VALLGYGTAV 598
             D  P  FRYPRG+GIG++LP   +G   E+GKGR++ E  +       VA+L  GT +
Sbjct: 484 EYDAGPIAFRYPRGSGIGLDLP--EEGEVQEIGKGRVVRESRQVPGTRSGVAILSLGTRL 541

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQ 658
              L A+  L + G+ +TVADARF KP+D  L+  L   HEVLIT+EEG+IGGF S VVQ
Sbjct: 542 HESLRAADQLAAQGISVTVADARFAKPIDTKLVDDLVAQHEVLITLEEGAIGGFSSLVVQ 601

Query: 659 FLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LA+ G LD TVK+RP+ LPD+YIDH +P  Q  +AGLT  HI  T    LG
Sbjct: 602 HLAETGKLD-TVKFRPMALPDKYIDHNNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|83945404|ref|ZP_00957752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis sp. HTCC2633]
 gi|83851238|gb|EAP89095.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 635

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/643 (58%), Positives = 467/643 (72%), Gaps = 21/643 (3%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TP LD I+ P  +KN  +  LK +A+ELRA+ I  VS TGGHLG+ LGV+E+TVALH+
Sbjct: 2   PDTPHLDQISSPQDLKNRDLSFLKAVAEELRAETIDAVSVTGGHLGAGLGVVEMTVALHH 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P D ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES+YD FG  H+ST
Sbjct: 62  VFDTPSDILIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESDYDPFGAAHAST 121

Query: 192 SISAGLGMAVGRDLK---GRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SISAGLG AVGRDLK   GRK  VVAVIGDG+M+AG AYEAMNNAG +  D+IVILNDN 
Sbjct: 122 SISAGLGFAVGRDLKHEEGRK--VVAVIGDGSMSAGMAYEAMNNAGDMKKDLIVILNDN- 178

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S   +R  S++    +R++ +GV + +G  + E A + +EY
Sbjct: 179 DMSIA--------PPVGAMSHYFARQVSSKSYNSIRKLGRGVAEALG--VKEHARRAEEY 228

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            RGM    G TLFEE+G  Y+GP+DGH++D LVA+L  V++    GP+LIH VT+KG+GY
Sbjct: 229 LRGM--AMGGTLFEEMGFRYVGPIDGHDMDQLVAVLRNVRDAGE-GPILIHAVTQKGKGY 285

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGVAKF+  TG+Q KS     SYT  FA ALI  AE D+ + A+ AAM G
Sbjct: 286 APAEAADDKYHGVAKFNVVTGEQQKSKPAAPSYTGVFANALIQLAETDEKICAVTAAMPG 345

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F   +P R FDVGIAEQHAVTFAAGLA EGLKP+ AIYS+F+QR YDQVVHDV 
Sbjct: 346 GTGVDKFAAAYPDRAFDVGIAEQHAVTFAAGLAAEGLKPYAAIYSTFLQRGYDQVVHDVA 405

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH G+FDV +M  LP MV+MA +DEAEL  MVATA  ID
Sbjct: 406 IQSLPVRFAIDRAGLVGADGATHAGAFDVGYMGALPGMVLMAAADEAELARMVATANEID 465

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           DRPS FRYPRG G+GVE+P   + IPLE+GKGRI+ EG  VA+L +G  +   L ++  L
Sbjct: 466 DRPSAFRYPRGEGLGVEIP--KELIPLEIGKGRIVREGSGVAILSFGARLGEVLKSADEL 523

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KPLDH LIR+L + HEVLIT+EEG++GGFG+ V+ FLA+DG LD 
Sbjct: 524 AAYGLNPTVADARFAKPLDHDLIRTLVREHEVLITIEEGAVGGFGAFVLHFLAEDGALDA 583

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            VK R + LPD + D  SP      AGL   HI A V + LG+
Sbjct: 584 GVKIRTMTLPDIFQDQDSPYGMYETAGLNAKHITAKVLDALGR 626


>gi|302383898|ref|YP_003819721.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194526|gb|ADL02098.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 638

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/645 (58%), Positives = 461/645 (71%), Gaps = 14/645 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++ P  M+     +L+QLADELRA+ I  VS TGGHLG+ LGV+ELTVALH+
Sbjct: 2   PDTPLLDKVHVPADMRGFDAAQLRQLADELRAETIDAVSTTGGHLGAGLGVVELTVALHH 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           V+N P D ++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG  H+ST
Sbjct: 62  VYNTPDDILIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHAST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG A  RD +G++N VVAVIGDG+M+AG AYEAMNNA      + VILNDN  +S
Sbjct: 122 SISAALGFAAARDQQGKQNKVVAVIGDGSMSAGMAYEAMNNAAETTGQLTVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG +S+ L++  S    +  R+  + V + +  P  E A K +EYARG
Sbjct: 181 IA--------PPVGGMSAYLAKQVSGGAYQNFRKFGREVVQHMPRPFREAARKAEEYARG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+ G   T FEELG YYIGPVDGH++D+LV IL+      T  PV++HVVT+KG+GY  A
Sbjct: 233 MVVGG--TFFEELGFYYIGPVDGHDMDNLVPILKNAAAI-TDRPVVVHVVTQKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E +ADK H V KFD  +GKQ KS +   SYT  F   LI  A +D  +VAI AAM  GTG
Sbjct: 290 ESSADKLHAVVKFDVVSGKQSKSVSNAPSYTKVFGTELIKRAAIDPSIVAITAAMPSGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF + +P R +DVGIAEQHAVTFAAGLA +G+KPFCAIYS+F+QR YDQVVHDV +QK
Sbjct: 350 LDLFGQAYPKRTYDVGIAEQHAVTFAAGLAADGMKPFCAIYSTFLQRGYDQVVHDVAIQK 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFAMDRAGLVGADG TH GSFD+ +M  LP MV+MA +DEA+L  M+ATA  IDDRP
Sbjct: 410 LPVRFAMDRAGLVGADGSTHAGSFDIGYMGALPGMVLMAAADEADLAAMIATACEIDDRP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S FRYPRG+G+GVE+P      PLE+GKGRI+ EG  VA+L +GT +Q  L A+ LL ++
Sbjct: 470 SAFRYPRGDGVGVEIP--ELAAPLEIGKGRIVREGTAVAILSFGTRLQESLKAADLLAAH 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           G+  TVADARF KPLDH LI  LA+ HE LITVEEG++GGFG+ V+QFLA +G LD  +K
Sbjct: 528 GISATVADARFAKPLDHDLITRLAREHEALITVEEGAMGGFGAFVLQFLASEGALDAGLK 587

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            R L LPD + D  SPA Q   AGL   HIAA     LG  + AL
Sbjct: 588 IRTLHLPDVFQDQDSPAAQYVTAGLDADHIAAAALKALGVEKSAL 632


>gi|217976903|ref|YP_002361050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocella silvestris
           BL2]
 gi|217502279|gb|ACK49688.1| deoxyxylulose-5-phosphate synthase [Methylocella silvestris BL2]
          Length = 642

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/649 (57%), Positives = 472/649 (72%), Gaps = 19/649 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I+ P  ++ L   +L ++A +LR + I  VS TGGHLG+ LGV+ELTVALHYVF
Sbjct: 6   TPLLDKIHTPADLRRLPESDLAEVARQLREETISAVSVTGGHLGAGLGVVELTVALHYVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKI+TGRRD++ T+R+  GLSGFT+RSESEYD FG  HSSTSI
Sbjct: 66  NTPDDRLIWDVGHQAYPHKIITGRRDRIRTLRRGGGLSGFTRRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV   L GR  NV+AVIGDGAM+AG AYEAMNNAG + S +I+ILNDN  +S+ 
Sbjct: 126 SAGLGMAVANTLSGRPGNVIAVIGDGAMSAGMAYEAMNNAGAMHSRLIIILNDN-DMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PP GALSS L+RL S    R +RE AK + + +   +++ A K +E+AR   
Sbjct: 185 --------PPAGALSSYLARLVSGDAYRSVREAAKQLGRLLPRFVYDRARKTEEFARNFW 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG+YY+GP+DGHN+D ++ +L+ V++ K TGP+L+HVVT+KG+GY  AE 
Sbjct: 237 AGG--TLFEELGIYYVGPIDGHNLDQMLPVLKNVRDFKETGPILVHVVTQKGKGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
             DKYH V  FD  TGKQ K       YT+ FAE+L+ EA  D  +VAI AAM  GTGL+
Sbjct: 295 THDKYHAVNMFDVVTGKQVKPKPNAPVYTSVFAESLVKEAAKDDKIVAITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F + FP R FDVGIAEQHAVTFAAGLA EG KPFC IYS+F+QR YDQVVHDV +Q LP
Sbjct: 355 IFQKTFPERTFDVGIAEQHAVTFAAGLATEGFKPFCTIYSTFLQRGYDQVVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD++F+  LPNMVVMA +DE+EL HMVATAAA D+ P  
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDISFLGILPNMVVMAAADESELVHMVATAAAYDEGPIA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+++P   +G+PLE+G+GRI+ EG++VA+L +G  +   + A+  L + G+
Sbjct: 475 LRYPRGEGVGIDMP--IEGVPLEIGRGRIMREGKQVAILSFGARLAEVMKAADELAALGV 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT---- 669
             TVADARF KPLD  LI  LA SHE LIT+EEGS+GGFGS V Q L   G LDG     
Sbjct: 533 STTVADARFAKPLDEELIMRLASSHEALITIEEGSVGGFGSFVAQKLTDSGALDGLGARP 592

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +K+R +VLPD ++DH  P    AQAGL    I A V ++LG  REAL++
Sbjct: 593 LKFRSMVLPDLFLDHDKPEKLYAQAGLDAKAIVAKVLSVLG--REALDV 639


>gi|254512770|ref|ZP_05124836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           KLH11]
 gi|221532769|gb|EEE35764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           KLH11]
          Length = 643

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/646 (57%), Positives = 461/646 (71%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +N P  +K  S  +L QLA ELRA+ I  VS TGGHLG+ LGV+ELT A
Sbjct: 3   SDRPNTPLLDLVNRPADLKQFSDGQLHQLAHELRAETISAVSVTGGHLGAGLGVVELTTA 62

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDVGHQ YPHKILT RRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 63  LHAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 122

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 123 SSTSISAALGFSVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVIL 182

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALS+ LSR+ +  P  +L+  AKG    +  P  E A +
Sbjct: 183 NDN-EMSIA--------PPVGALSTYLSRIYAEEPFHDLKAAAKGAVSLLPEPFREGAKR 233

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +GM    G TLFEELG  Y+GP+DGH++D L+ +L  VK  K TGP+LIHV+T+K
Sbjct: 234 AKEMLKGM--AVGGTLFEELGFSYLGPIDGHDLDQLLPVLRAVK-AKATGPILIHVLTKK 290

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A DK H  A+FD  TG+Q K+ +   SYT+ F +AL+  A  D  +VA+ A
Sbjct: 291 GKGYAPAEQARDKGHATARFDVVTGEQKKAPSNAPSYTSVFGKALVEAAARDDKIVAVTA 350

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDV IAEQH VTF+A LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 351 AMPDGTGLNLFAERYPSRCFDVAIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVV 410

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ ++A LP MVVMA +DEAEL HMVATA
Sbjct: 411 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELIHMVATA 470

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G+GV+LP  ++   LE+GKGR++  G RVALL +GT +     A
Sbjct: 471 AAHDDGPIAFRYPRGEGVGVDLP--DQAEVLEIGKGRMIQTGARVALLSFGTRLAEVRKA 528

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  LI  LA +HE LIT+EEG+IGGFGSHV Q LA +G
Sbjct: 529 AESLTARGITPTIADARFAKPLDRDLILDLAANHEALITIEEGAIGGFGSHVAQLLADEG 588

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SPAD  A AG+    I A V  +LG
Sbjct: 589 VFDHGLKYRSMVLPDIFIDQSSPADMYAVAGMNAEQIEAKVLAVLG 634


>gi|126463555|ref|YP_001044669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126105219|gb|ABN77897.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 637

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/642 (57%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P+ MK L+ REL+ LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GH
Sbjct: 62  LHAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA +G A  R++ G   + VAVIGDG+M+AG A+EA+N+ G+L + +IVILNDN 
Sbjct: 122 SSTSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +  E 
Sbjct: 181 EMSIA--------PPVGALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +  G   TLFEELG  Y+GP+DGH++D L+ +L  VK  +   PVLIHV+T+KGRGY
Sbjct: 233 LKSVTVGG--TLFEELGFSYVGPIDGHDLDQLLPVLRTVKQ-RAHAPVLIHVITKKGRGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A D+ H   KF+  TG Q K  +   SYT  FA++LI EAEVD+ + A+ AAM  
Sbjct: 290 APAEAARDRGHATNKFNVLTGAQVKPVSNAPSYTKVFAQSLIKEAEVDERICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP R FDVGIAEQHAVTF+A LA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F++ LP +VVMA +DEAEL HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GVE+P   KG+PL++G+GR++ EG R+ALL +GT +     A+  L
Sbjct: 470 EGPIAFRYPRGDGVGVEMPA--KGVPLQIGRGRVVREGTRIALLSFGTRLAEVQVAAEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TVADARF KPLD  LI  LA  HE LIT+EEG+IGGFGSHV Q LA+ G+ D 
Sbjct: 528 AARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             ++R +VLPD +IDH S     A AGL  + I       LG
Sbjct: 588 GFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|406706618|ref|YP_006756971.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB5]
 gi|406652394|gb|AFS47794.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB5]
          Length = 637

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/634 (55%), Positives = 464/634 (73%), Gaps = 13/634 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            L+ IN+P  +K +S ++LK ++DELR +VI  VS TGGHLG+SLGV+ELTVALHYVFN 
Sbjct: 7   FLNQINFPSDLKKISEKDLKVVSDELREEVIDAVSTTGGHLGASLGVVELTVALHYVFNT 66

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ+YPHKILTGR+DK+ T+RQ  G+SGFTKR+ESEYD FG  HSSTSISA
Sbjct: 67  PQDKIIWDVGHQSYPHKILTGRKDKIRTLRQGGGISGFTKRTESEYDPFGAAHSSTSISA 126

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLG+A    L  + + V+AVIGDGA++AG AYEAMNNAG   + MIVILNDN ++S+   
Sbjct: 127 GLGIAEANKLSNKNDEVIAVIGDGAISAGMAYEAMNNAGTSKAKMIVILNDN-EMSIA-- 183

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGA+S+ L+++ S +    LRE  K +T          A K ++  R  ++G
Sbjct: 184 ------KPVGAMSTYLAKIFSGKIYFSLRETIKLITSAFSKRFSAKAGKAEDLFRSAVTG 237

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLF  LG YYIGP+DGH++  LV IL+ VK +K  GP+LIH+ T+KG+GY +AEKA 
Sbjct: 238 G--TLFHSLGFYYIGPIDGHDLTTLVPILKNVKQSKHQGPILIHIKTQKGKGYSFAEKAN 295

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           D YHGV+KF+  TG+Q K+SA   SYT  FA+ LI  A+ D  +VA+ AAM GGTGL++F
Sbjct: 296 DHYHGVSKFNVGTGEQVKASASAPSYTKVFAKTLIEHAKKDSKIVAVTAAMPGGTGLDVF 355

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            + FP+R +DVGIAEQHAVTFAAGLA E  KP+ AIYS+F+QRAYDQ+VHDV +Q LPVR
Sbjct: 356 GKEFPSRMYDVGIAEQHAVTFAAGLATENYKPYAAIYSTFLQRAYDQIVHDVAIQSLPVR 415

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH GSFD+T+++ LPN ++MA SDEAEL  M+ T+  I+D+P  FR
Sbjct: 416 FAIDRAGLVGADGPTHAGSFDITYLSTLPNFIIMAASDEAELVRMINTSVDINDKPCAFR 475

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+G ELPP ++ I  E+GKGRI+ EG+++A+L +GT +   L AS  L+  G+ +
Sbjct: 476 YPRGTGLGTELPPISEKI--EIGKGRIIQEGKKLAVLNFGTRLSEVLKASENLKKKGINI 533

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TV DARF KPLD  LI  LA +HE ++T+EEG+IGGFGSHVV FL +  LLD  +K+R +
Sbjct: 534 TVIDARFAKPLDENLIWQLATTHESILTIEEGAIGGFGSHVVNFLTKKNLLDSNLKFRSM 593

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           +LPD +ID   P    ++A L  S I   + +++
Sbjct: 594 ILPDLFIDQDKPEIMYSEALLDSSSIEEKIMDLI 627


>gi|332559608|ref|ZP_08413930.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
 gi|332277320|gb|EGJ22635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
          Length = 637

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/642 (57%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P+ MK L+ REL+ LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GH
Sbjct: 62  LHAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA +G A  R++ G   + VAVIGDG+M+AG A+EA+N+ G+L + +IVILNDN 
Sbjct: 122 SSTSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +  E 
Sbjct: 181 EMSIA--------PPVGALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +  G   TLFEELG  Y+GP+DGH++D L+ +L  VK  +   PVLIHV+T+KGRGY
Sbjct: 233 LKSVTVGG--TLFEELGFSYVGPIDGHDLDQLLPVLRTVKQ-RAHAPVLIHVITKKGRGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A D+ H   KF+  TG Q K  +   SYT  FA++LI EAEVD+ + A+ AAM  
Sbjct: 290 APAEAARDRGHATNKFNVLTGAQVKPVSNAPSYTKVFAQSLIKEAEVDERICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP R FDVGIAEQHAVTF+A LA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F++ LP +VVMA +DEAEL HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GVE+P   KG+PL++G+GR++ EG R+ALL +GT +     A+  L
Sbjct: 470 EGPIAFRYPRGDGVGVEMP--VKGVPLQIGRGRVVNEGTRIALLSFGTRLAEVQVAAEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TVADARF KPLD  LI  LA  HE LIT+EEG+IGGFGSHV Q LA+ G+ D 
Sbjct: 528 AARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             ++R +VLPD +IDH S     A AGL  + I       LG
Sbjct: 588 GFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|221640629|ref|YP_002526891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           KD131]
 gi|221161410|gb|ACM02390.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodobacter sphaeroides
           KD131]
          Length = 637

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/642 (57%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P+ MK L+ REL+ LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GH
Sbjct: 62  LHAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA +G A  R++ G   + VAVIGDG+M+AG A+EA+N+ G+L + +IVILNDN 
Sbjct: 122 SSTSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +  E 
Sbjct: 181 EMSIA--------PPVGALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +  G   TLFEELG  Y+GP+DGH++D L+ +L  VK  +   PVLIHV+T+KGRGY
Sbjct: 233 LKSVTVGG--TLFEELGFSYVGPIDGHDLDQLLPVLRTVKQ-RAHAPVLIHVITKKGRGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A D+ H   KF+  TG Q K  +   SYT  FA++LI EAEVD+ + A+ AAM  
Sbjct: 290 APAEAARDRGHATNKFNVLTGAQVKPVSNAPSYTKVFAQSLIKEAEVDERICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP R FDVGIAEQHAVTF+A LA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F++ LP +VVMA +DEAEL HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GVE+P   KG+PL++G+GR++ EG R+ALL +GT +     A+  L
Sbjct: 470 EGPIAFRYPRGDGVGVEMP--VKGVPLQIGRGRVVREGTRIALLSFGTRLAEVQVAAEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TVADARF KPLD  LI  LA  HE LIT+EEG+IGGFGSHV Q LA+ G+ D 
Sbjct: 528 AARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             ++R +VLPD +IDH S     A AGL  + I       LG
Sbjct: 588 GFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|429207275|ref|ZP_19198534.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
 gi|428189650|gb|EKX58203.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
          Length = 637

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/642 (57%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P+ MK L+ REL+ LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPCTPTLDRVTLPVDMKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GH
Sbjct: 62  LHAVFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA +G A  R++ G   + VAVIGDG+M+AG A+EA+N+ G+L + +IVILNDN 
Sbjct: 122 SSTSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +  E 
Sbjct: 181 EMSIA--------PPVGALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +  G   TLFEELG  Y+GP+DGH++D L+ +L  VK  +   PVLIHV+T+KGRGY
Sbjct: 233 LKSVTVGG--TLFEELGFSYVGPIDGHDLDQLLPVLRTVKQ-RAHAPVLIHVITKKGRGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A D+ H   KF+  TG Q K  +   SYT  FA++LI EAEVD+ + A+ AAM  
Sbjct: 290 APAEAARDRGHATNKFNVLTGAQVKPVSNAPSYTKVFAQSLIKEAEVDERICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP R FDVGIAEQHAVTF+A LA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F++ LP +VVMA +DEAEL HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GVE+P   +G+PL++G+GR++ EG R+ALL +GT +     A+  L
Sbjct: 470 EGPIAFRYPRGDGVGVEMPA--RGVPLQIGRGRVVREGTRIALLSFGTRLAEVQVAAEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TVADARF KPLD  LI  LA  HE LIT+EEG+IGGFGSHV Q LA+ G+ D 
Sbjct: 528 AARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGIFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             ++R +VLPD +IDH S     A AGL  + I       LG
Sbjct: 588 GFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|418406285|ref|ZP_12979604.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           5A]
 gi|358006778|gb|EHJ99101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           5A]
          Length = 639

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/640 (58%), Positives = 465/640 (72%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VS TGGHLG+ LGV+ELT+A+H 
Sbjct: 5   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSSTGGHLGAGLGVVELTIAIHK 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 65  VFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L      V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 125 SISAGLGMAVAAGLDQSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 184 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 236 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D  ++ + AAM  GTG
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 353 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA SDEAEL HMV TAAA D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  L++GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 473 ISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD +++   P    A AGL  + I +TVFN LGQ
Sbjct: 591 VRTLTLPDHWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630


>gi|325292127|ref|YP_004277991.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
 gi|325059980|gb|ADY63671.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
          Length = 636

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/640 (58%), Positives = 465/640 (72%), Gaps = 14/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD +N+P  +K +  R+L +LA ELR ++I  VS TGGHLG+ LGV+ELT+A+H 
Sbjct: 2   PQTPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSSTGGHLGAGLGVVELTIAIHK 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R+ESEYD FG GHSST
Sbjct: 62  VFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEGGLSGFTRRAESEYDDFGAGHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISAGLGMAV   L      V+AVIGDG+M+AG A+EA+NNAG LD+ +IVILNDN  +S
Sbjct: 122 SISAGLGMAVAAGLDQSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDN-DMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PP GA+S+ L+RL S R     R+  K +T  +G  +     +   +ARG
Sbjct: 181 IA--------PPTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   TLFEELG Y+IGP+DGH+ D L+ +L  V++ +  GPVLIHVVT+KG+GY  A
Sbjct: 233 YVTGG--TLFEELGFYHIGPIDGHSFDHLLPVLRNVRDNQK-GPVLIHVVTQKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT+ FAEALI EA +D  ++ + AAM  GTG
Sbjct: 290 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDDKIIGVTAAMPNGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+     FP R FDVGIAEQHAVTFAAGLA +G KPFCA+YS+F+QR YDQ+VHDV +Q 
Sbjct: 350 LDKMAELFPARTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRF +DRAG VGADGPTH GSFD TF+A LP MVVMA SDEAEL HMV TAAA D+ P
Sbjct: 410 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAASDEAELKHMVRTAAAYDEGP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             FRYPRG G+GVE+P   +G  L++GKGRI+ EG +VALL +GT +  CLAA+  L++ 
Sbjct: 470 ISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LIR LA  HEVL+T+EEGS+GGFG+HV+ F+A  GLLD   K
Sbjct: 528 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 587

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            R L LPD +++   P    A AGL  + I +TVFN LGQ
Sbjct: 588 VRTLTLPDHWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 627


>gi|323447373|gb|EGB03297.1| hypothetical protein AURANDRAFT_59650 [Aureococcus anophagefferens]
          Length = 660

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/660 (58%), Positives = 477/660 (72%), Gaps = 36/660 (5%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MK  SI ELKQLA ELR DVI  VSKTGGHL SSLGV+ELT ALHYVF+AP+DRI+WDV 
Sbjct: 1   MKKFSIAELKQLAHELRWDVIRAVSKTGGHLSSSLGVVELTTALHYVFDAPEDRIMWDVS 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQ YPHKILTGRR +M T+RQ DGLSGF KR+ESEYD FG GHSSTSISA LGM+VG+  
Sbjct: 61  HQCYPHKILTGRRSRMGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAALGMSVGKSQ 120

Query: 206 KGR-KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPP 263
           KGR +NN +AVIGDGA+T G A+EAMNNA YL + MI +LNDN QVSLPT T   G + P
Sbjct: 121 KGRAQNNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVIP 180

Query: 264 VGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEE 323
            GALS+  SRL S++P  + R+VAKG++      +  + AK+DEYARG+++G   TLFEE
Sbjct: 181 SGALSAYTSRLISSKPFADFRQVAKGISSLFPSEIQAINAKIDEYARGIVTGG--TLFEE 238

Query: 324 LGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAK 383
           LG YYIGPVDGH++++LV ILE +++T +  PVL+H+ TEKG GY  A +A+DK HGVAK
Sbjct: 239 LGFYYIGPVDGHDLENLVPILENLRDTPSNKPVLLHIKTEKGYGYAPAMQASDKMHGVAK 298

Query: 384 FDPATGKQFKSSARTQ-------SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFL 436
           FD ATGKQFK +           S TT FA  L   AE D+DV+ I AAM GGTG+++F 
Sbjct: 299 FDVATGKQFKGAPPAPGAPPKPASLTTIFANELCRLAEKDRDVIGITAAMPGGTGMDIFG 358

Query: 437 RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRF 496
           RRFP R +DVGIAEQHAVTFAAGLA EGLKPFC IYS+FMQR YDQ+VHDV +Q LPVRF
Sbjct: 359 RRFPKRTYDVGIAEQHAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQDLPVRF 418

Query: 497 AMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRY 556
            +DRAGLVG DGPTH GSFD+T++ C+P +V+MAP++E +L +M+ATA AIDD+PSC RY
Sbjct: 419 ILDRAGLVGNDGPTHHGSFDLTYLGCMPGLVIMAPAEEVDLRNMIATAYAIDDKPSCVRY 478

Query: 557 PRGNGIGV------------ELPPGNKGIPLEVGKGRILIEG--------ERVALLGYGT 596
           PRG G G+            E+P   + +P  VGKGRI+ +G        ++VA+L  GT
Sbjct: 479 PRGTGYGLEKLNDLFDLGLTEVPEAGEVLP--VGKGRIIKDGVKGRPGANKKVAILSLGT 536

Query: 597 AVQSCLAASALLES--NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 654
            + +   A+  LE   + + +TVADARF KPLD  L+R LAK ++VLIT+EE S+ GFG 
Sbjct: 537 RLAAAAEAAKELEGEYDDVAVTVADARFMKPLDIDLVRKLAKENDVLITIEENSVLGFGD 596

Query: 655 HVVQFLAQDGLL-DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           +V+ FLA DG L DG +K RP+VLPD +I+  +   Q   AGL   HI  T   +L + +
Sbjct: 597 YVLHFLALDGALDDGNLKVRPMVLPDAFIETATQFQQYEAAGLNAKHIVGTAAKLLDRAK 656


>gi|329888093|ref|ZP_08266691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           ATCC 11568]
 gi|328846649|gb|EGF96211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           ATCC 11568]
          Length = 636

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/640 (58%), Positives = 456/640 (71%), Gaps = 15/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+ +P   +   I +LKQLADE+RA+ I  VS TGGHLG+ LGV+ELTVALH+
Sbjct: 2   PHTPLLDTVKFPADTRGFDIAQLKQLADEVRAETIDAVSVTGGHLGAGLGVVELTVALHH 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF  P+D ++WDVGHQ YPHKILTGRRD+M T+RQ  GLSGFTKRSESEYD FG  H+ST
Sbjct: 62  VFETPQDILIWDVGHQCYPHKILTGRRDRMRTLRQGGGLSGFTKRSESEYDPFGAAHAST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQV 250
           SISA LG A  RD KG  N VVAVIGDG+M+AG AYEAMNNA    S  ++V+LNDN  +
Sbjct: 122 SISAALGFAAARDAKGGNNRVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVVLNDN-DM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVG +S+ L++  S    + +R+V K     +  P  + A K +EYAR
Sbjct: 181 SIA--------PPVGGMSAYLAKQVSGGAYQNIRKVGKKFVDHMPRPFRDAARKAEEYAR 232

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GMI G   TLFEELG YY+GP+DGH++++LV IL+      T  PVL+HVVT+KG+GY  
Sbjct: 233 GMIVGG--TLFEELGFYYVGPIDGHDMENLVPILKNAAAI-TDRPVLVHVVTQKGKGYAP 289

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE +ADK H V KFD  +GKQ K+ +   SYT  F   LI  A+VD  ++AI AAM  GT
Sbjct: 290 AESSADKLHAVVKFDVVSGKQAKAVSNAPSYTKVFGTELIKHAQVDPTIMAITAAMPSGT 349

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF + FP R FDVGIAEQHAVTFAAGLA +G+KP CA+YS+F+QR YDQVVHDV +Q
Sbjct: 350 GLDLFGQAFPDRTFDVGIAEQHAVTFAAGLAADGMKPVCALYSTFLQRGYDQVVHDVAIQ 409

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFAMDRAGLVGADG TH GSFD+ +M  LP MV+MA SDEAEL  M++T+ AIDDR
Sbjct: 410 SLPVRFAMDRAGLVGADGSTHAGSFDIGYMGALPGMVLMAASDEAELAAMISTSLAIDDR 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           PS FRYPRG G+GV++P      PLE+GKGRI+ EG  VA+L  GT +Q  L A+ +L +
Sbjct: 470 PSAFRYPRGEGVGVDIP--ELAAPLEIGKGRIVREGTSVAILSLGTRLQESLKAADMLAA 527

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            G+  TVADARF KPLD  LI  LA+ HE LITVEEG++GGFG+ V+Q LA+ G LDG +
Sbjct: 528 KGVSATVADARFAKPLDADLILRLAREHEALITVEEGAMGGFGAFVLQLLAEKGALDGGL 587

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           K R L LPD + D   P    AQAGL   HIAA     LG
Sbjct: 588 KIRTLHLPDIFQDQDKPEVMYAQAGLNAEHIAAAAVTALG 627


>gi|254418670|ref|ZP_05032394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
 gi|196184847|gb|EDX79823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
          Length = 636

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/640 (58%), Positives = 457/640 (71%), Gaps = 15/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+ +P  M+   I +LKQLA E+RA+ I  VS TGGHLG+ LGV+ELT ALH+
Sbjct: 2   PDTPLLDTVKFPADMRGFDIAQLKQLAQEVRAETIDAVSVTGGHLGAGLGVVELTTALHH 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF  PKD ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H+ST
Sbjct: 62  VFETPKDILIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAAHAST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQV 250
           SISA LG A  RD KG KN VVAVIGDG+M+AG AYEAMNNA    +  ++VILNDN  +
Sbjct: 122 SISAALGFAAARDQKGEKNKVVAVIGDGSMSAGMAYEAMNNAAEATNGQLMVILNDN-DM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVG +S+ L+ L S    + +R + + V + +  P    A K +EYAR
Sbjct: 181 SIA--------PPVGGMSAYLAGLVSGGAYQNVRRLGRSVAQHLPRPFRNAAKKAEEYAR 232

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM++G   TLFEELG YY+GP+DGH++++LV IL++    +   PVL+HVVT+KG+GY  
Sbjct: 233 GMVTGG--TLFEELGFYYVGPIDGHDMENLVPILKKAAAIEDR-PVLVHVVTQKGKGYAP 289

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE +ADK H V KFD  +GKQ KS +   SYT  F   LI  A +D  +VAI AAM  GT
Sbjct: 290 AESSADKLHAVVKFDVVSGKQAKSVSNAPSYTKVFGTELIKHAALDPSIVAITAAMPSGT 349

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF + FP R +DVGIAEQHAVTFAAGLA +G+KP CAIYS+F+QR YDQVVHDV +Q
Sbjct: 350 GLDLFGQAFPDRTYDVGIAEQHAVTFAAGLAADGMKPVCAIYSTFLQRGYDQVVHDVAIQ 409

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFAMDRAGLVGADG TH GSFD+ FM  LP MV+MA +DEAEL  M++T+ AIDDR
Sbjct: 410 SLPVRFAMDRAGLVGADGATHAGSFDIGFMGALPGMVLMAAADEAELAGMISTSLAIDDR 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           PS FRYPRG+G+GVE+P      P E+G+GRI+ EG  VA+L  GT +Q  L A+ LL +
Sbjct: 470 PSAFRYPRGDGVGVEIP--ELAAPFEIGRGRIVREGTSVAILSLGTRLQESLKAADLLAA 527

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            G+  TVADARF KPLD  LI  LA+ HE LITVEEG++GGFG+ V+Q LA+ G LD  +
Sbjct: 528 RGVSATVADARFAKPLDADLILRLAREHEALITVEEGAMGGFGAFVLQLLAEKGALDRGL 587

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           K R L LPD + D  +PA   A AGL   HIAA     LG
Sbjct: 588 KVRTLNLPDVFQDQDAPAAMYALAGLNADHIAAAALRALG 627


>gi|84685989|ref|ZP_01013885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666082|gb|EAQ12556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2654]
          Length = 648

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/644 (56%), Positives = 460/644 (71%), Gaps = 18/644 (2%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           ++P TPLLD I  P  M+ LS+ E++QLADELRA+ I++VSKTGGHLG+ LGV+ELTVA+
Sbjct: 9   EKPATPLLDRIASPADMRGLSVAEMRQLADELRAETIYSVSKTGGHLGAGLGVVELTVAI 68

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           H +F+ P D+++WDV HQ YPHKILTGRRD+M ++RQ DGLSGFTKR+ES YD FG  HS
Sbjct: 69  HAIFDTPHDKLIWDVSHQCYPHKILTGRRDRMTSIRQKDGLSGFTKRTESPYDPFGAAHS 128

Query: 190 STSISAGLGMAVGRDLKGRKNN----VVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
           STSISA LG AV RDL G   N     +AVIGDGAM+AG A+EAMNNAG+L+  +IV+LN
Sbjct: 129 STSISAALGFAVARDLGGSPENGIGDCIAVIGDGAMSAGMAFEAMNNAGHLNKRLIVVLN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGALS+ LSRL +  P +E +  AKG  + +  P  E A + 
Sbjct: 189 DN-EMSI--------APPVGALSTYLSRLYAGEPFQEFKAAAKGAVRLLPPPFQEGARRA 239

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
            E  +GM  G   T+FEELG  Y+GP+DGH++D L  +L  VK  + TGPVLIH +T KG
Sbjct: 240 KEMLKGMTVGG--TMFEELGFSYVGPIDGHDMDQLAQVLRTVK-ARATGPVLIHAITRKG 296

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GY  AE+  DK H  AKFD  TGKQ K+ +   SYT+ F + L    E D  +VA+ AA
Sbjct: 297 KGYRPAEERDDKGHATAKFDVPTGKQHKAPSNAPSYTSVFGKTLTKLGETDDKIVAVTAA 356

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTG+++F  RFP+R FDVGIAEQH VTF+AGLA  G++PFCAIYS+F+QR YDQVVH
Sbjct: 357 MPDGTGVDIFGARFPSRTFDVGIAEQHGVTFSAGLAAGGMRPFCAIYSTFLQRGYDQVVH 416

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q+LPVRF +DRAGLVGADG TH GSFD+ ++A LP+ V+MAPSDEAEL +M+ TA 
Sbjct: 417 DVAIQRLPVRFMIDRAGLVGADGATHAGSFDIAYLANLPDFVIMAPSDEAELVNMIETAR 476

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            IDDRPS  RYPRG G+G E+P       LE+GKGRI+ EG+RVA L  G  +     A+
Sbjct: 477 GIDDRPSAVRYPRGAGVGTEMP--ETPTALEIGKGRIVAEGKRVAFLSLGPRLTEVHKAA 534

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L + G+  T+ADARF KPLD  +I  LA+ HEVLIT+EEG+IGGFGSHV Q LA++G+
Sbjct: 535 EMLTAKGITPTIADARFAKPLDEDMILKLAREHEVLITIEEGAIGGFGSHVAQLLAENGV 594

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            D  +K+R +VLPD +ID  +P      AGLT   + A V + L
Sbjct: 595 FDSGLKFRSMVLPDTFIDQATPDQMYEVAGLTADDMVAKVMSAL 638


>gi|407799466|ref|ZP_11146359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
           guishaninsula JLT2003]
 gi|407058651|gb|EKE44594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
           guishaninsula JLT2003]
          Length = 641

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/647 (57%), Positives = 463/647 (71%), Gaps = 18/647 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ L+  EL Q+ADELRA+ I  VS+TGGHLG+ LGV+ELTVALH
Sbjct: 4   RPATPLLDRIHEPADLRGLTDAELVQVADELRAETISAVSQTGGHLGAGLGVVELTVALH 63

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VF  P+DR++WDV HQTYPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  HSS
Sbjct: 64  AVFETPRDRLIWDVSHQTYPHKILTGRRDRIRTLRQKDGLSGFTKRSESVYDPFGAAHSS 123

Query: 191 TSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           TSISA LG A  RDL GR +    + +AVIGDGAM+AG A+EAMNNAG++   + V+LND
Sbjct: 124 TSISAALGFATARDLGGRPDPRLGDAIAVIGDGAMSAGMAFEAMNNAGHMKKRLFVVLND 183

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N ++S+         PPVGA+SS LSRL +  P +E +  AKG    +  P+ + A +  
Sbjct: 184 N-EMSIA--------PPVGAMSSYLSRLYAGAPFQEFKAAAKGAVSLLPQPLQQGARRAK 234

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           +  + +  G   TLFEELG  YIGP+DGH++D L+ +L  V+  + TGP+L+HV+T KG+
Sbjct: 235 DLIKHITIGG--TLFEELGFDYIGPLDGHDLDQLLPVLRTVR-ARATGPMLLHVITRKGK 291

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE+AAD+ H  +KFD  TGKQ KS +   SYT+ FA+ALI EA  D  + A+ AAM
Sbjct: 292 GYAPAEEAADRGHATSKFDVITGKQKKSPSNAPSYTSVFAKALIREAADDPRICAVTAAM 351

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             GTGLNLF  R  +RCFDVGIAEQH VTFAAGLA  G++PFCAIYS+F+QR YDQVVHD
Sbjct: 352 PDGTGLNLFAERHASRCFDVGIAEQHGVTFAAGLAAGGMRPFCAIYSTFLQRGYDQVVHD 411

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V LQ+LPVRFA+DRAGLVGADG TH G+FD+ F++ LP   VMA SDEAEL HMVATAAA
Sbjct: 412 VALQRLPVRFAIDRAGLVGADGATHAGAFDIAFLSNLPGFTVMAASDEAELVHMVATAAA 471

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            DD P  FR+PRG G GV+LP   +G+PLE+GKGRIL EG  VA+L  GT +   L A  
Sbjct: 472 HDDGPIAFRFPRGEGTGVDLP--ERGVPLEIGKGRILREGSGVAILCLGTRMVEVLQAHE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            L + G+  TVADARF KPLD  +I  LA+ H+ LITVEEG++GGFGSHV Q LA +G+ 
Sbjct: 530 ALAARGIVPTVADARFAKPLDREMILQLARDHDALITVEEGAVGGFGSHVAQLLADEGVF 589

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           D  + +R +VLPD +ID   P D  A AGL    I A V +++G  R
Sbjct: 590 DDGLVFRSMVLPDTFIDQADPRDMYAVAGLNAEDIEAKVLSVMGVAR 636


>gi|334344767|ref|YP_004553319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
           chlorophenolicum L-1]
 gi|334101389|gb|AEG48813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
           chlorophenolicum L-1]
          Length = 641

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/641 (58%), Positives = 459/641 (71%), Gaps = 14/641 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD + +P  ++ L   +L+QLADELR +VI  V  TGGHLGS LGV+ELT A
Sbjct: 2   NDRPSTPLLDQVVWPADLRKLQPDQLRQLADELRQEVISAVGVTGGHLGSGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESE+D FG  H
Sbjct: 62  IHYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV   ++GR    +AVIGDG+M+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAALGFAVANKMQGRPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+RL S+R    LR++AK + +++  P+H  A K DE+
Sbjct: 181 DMSIA--------PPVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM    G TLFEELG YY+GP+DGHN+D L+ +LE V++    GP L+HVVT+KG+GY
Sbjct: 233 ARGM--AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDA-AEGPCLVHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEAE D  V AI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVITGTQDKAPPGPPSYTGVFAKALIAEAERDPAVCAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT+++ LPN VVMA +DEAEL HMV T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLSSLPNFVVMAAADEAELVHMVHTCAVHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P   RYPRGNG+G+ LP   +   LE+GKGRI+ EG +VA+L  GT ++  L A+ +L
Sbjct: 470 DGPIAVRYPRGNGVGIALPETPE--RLEIGKGRIVREGRQVAILSLGTRLEEALKAAEVL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD A+IR L  +HEV +T+EEGSIGG G+HV+   +  GL+D 
Sbjct: 528 EAKGLSTTVADLRFAKPLDEAMIRRLLTTHEVAVTIEEGSIGGLGAHVLTMASDQGLIDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +K R + LPD + D   P  Q A A L    I  TV   L
Sbjct: 588 GLKLRTMRLPDIFQDQDKPEKQYADARLDAEAIVDTVLTAL 628


>gi|77464715|ref|YP_354219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
 gi|119368196|sp|Q3IYR6.1|DXS2_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|77389133|gb|ABA80318.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
          Length = 637

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/642 (57%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P+ +K L+ REL+ LADELRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPCTPTLDRVTLPVDIKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH +F+AP+D+I+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GH
Sbjct: 62  LHAIFDAPRDKIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESPYDCFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA +G A  R++ G   + VAVIGDG+M+AG A+EA+N+ G+L + +IVILNDN 
Sbjct: 122 SSTSISAAVGFAAAREMGGDTGDAVAVIGDGSMSAGMAFEALNHGGHLKNRVIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +  E 
Sbjct: 181 EMSIA--------PPVGALSSYLSRLYAGAPFQDFKAAAKGALGLLPEPFQEGARRAKEM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + +  G   TLFEELG  Y+GP+DGH++D L+ +L  VK  +   PVLIHV+T+KGRGY
Sbjct: 233 LKSVTVGG--TLFEELGFSYVGPIDGHDLDQLLPVLRTVKQ-RAHAPVLIHVITKKGRGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A D+ H   KF+  TG Q K  +   SYT  FA++LI EAEVD+ + A+ AAM  
Sbjct: 290 APAEAARDRGHATNKFNVLTGAQVKPVSNAPSYTKVFAQSLIKEAEVDERICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF  RFP R FDVGIAEQHAVTF+A LA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLNLFGERFPKRTFDVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F++ LP +VVMA +DEAEL HMVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GVE+P   KG+PL++G+GR++ EG R+ALL +GT +     A+  L
Sbjct: 470 EGPIAFRYPRGDGVGVEMP--VKGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  TVADARF KPLD  LI  LA  HE LIT+EEG+IGGFGSHV Q LA+ G+ D 
Sbjct: 528 AARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDR 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             ++R +VLPD +IDH S     A AGL  + I       LG
Sbjct: 588 GFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629


>gi|222085096|ref|YP_002543626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
           K84]
 gi|398382394|ref|ZP_10540482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
 gi|254782056|sp|B9JAL7.1|DXS_AGRRK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221722544|gb|ACM25700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
           K84]
 gi|397717559|gb|EJK78175.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
          Length = 638

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/644 (58%), Positives = 466/644 (72%), Gaps = 14/644 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +  P TPLLD ++YP  ++ L  R+L QLA E+R ++I  VS+TGGHLG+ LGV+ELT+A
Sbjct: 2   THMPETPLLDQVHYPSDLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P DR+++DVGHQ YPHKILTGRRD++ T+RQ  G+SGFT+R+ESEYD FG  H
Sbjct: 62  IHNVFDTPNDRLIFDVGHQCYPHKILTGRRDRIRTLRQEGGISGFTRRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  DL      V+AVIGDGAM+AG AYEA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVAADLDKTDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R     R++ K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGFRDLGKKLTAYLGKNVDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAQGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K      SYT+ FA+AL+ EA  D  +V I AAM  
Sbjct: 290 APAEAAADKYHGVNKFDVITGAQAKVKPNAPSYTSVFADALVQEATFDDKIVGITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP RCFDVGIAEQHAVTFAAGLA EG KPF A+YS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKLQEVFPKRCFDVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD TF+A LP  VVMA +DEAEL HMV TAAA D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG G+G+E+P   +G  LE+GKGRI+ +G +VALL +GT +   LAA+  L
Sbjct: 470 LGPISFRYPRGEGVGIEMP--ERGQILEIGKGRIVKQGSKVALLSFGTRLADSLAAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLDH LIR LA  HEVLIT+EEGS+GGFGS V+QFLA +GLLD 
Sbjct: 528 DAAGLPTTVADARFAKPLDHDLIRQLASHHEVLITIEEGSVGGFGSQVMQFLASEGLLDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
            +K R LV+PD +++   P    A AGL  + I  TVF  LG++
Sbjct: 588 GLKIRTLVMPDIWVEQAKPEVMNAMAGLDRAGIVQTVFKALGRS 631


>gi|349686639|ref|ZP_08897781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           oboediens 174Bp2]
          Length = 654

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/659 (56%), Positives = 477/659 (72%), Gaps = 33/659 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 8   PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 68  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 127

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 128 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 187

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 188 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 238

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 239 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 296

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 297 HGYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAA 356

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F R +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 357 MPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 416

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ 
Sbjct: 417 DVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSI 476

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ELP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 477 AFDEGPIGLRYPRGGGLGLELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPR 534

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +   L A+ +L + GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+
Sbjct: 535 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 594

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG--QTRE 714
             LA+ GLLD  V++RP+ LPDR+IDH + A Q  +AGL    I AT  + LG  Q+R+
Sbjct: 595 THLAKTGLLD-RVRFRPMTLPDRFIDHNTQAAQYHEAGLDAPAIVATALSALGVPQSRQ 652


>gi|114769862|ref|ZP_01447472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2255]
 gi|114549567|gb|EAU52449.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HTCC2255]
          Length = 642

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/643 (56%), Positives = 467/643 (72%), Gaps = 18/643 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD IN P  MKNLS  +L QLA ELR++ I  VS+TGGHLG+ LGV+ELT A+H
Sbjct: 5   RPNTPILDRINSPEDMKNLSDAQLYQLAKELRSETISIVSETGGHLGAGLGVVELTTAIH 64

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VF+ PKDR++WDV HQ YPHKILTGRR++M T+R+  GLSGFTKRSES +D FG  HSS
Sbjct: 65  AVFDTPKDRLIWDVSHQCYPHKILTGRRNQMRTIRKGGGLSGFTKRSESAFDPFGAAHSS 124

Query: 191 TSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           TSISA LG AV RDL G       + +AVIGDG+M+AG AYEAMNNAG+L   +IVILND
Sbjct: 125 TSISAALGFAVARDLGGAPEHGLGDAIAVIGDGSMSAGMAYEAMNNAGHLGKRLIVILND 184

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NK +S+         PPVGA+S+ LSRL +  P +EL+  AKG    +  P  + A +  
Sbjct: 185 NK-MSIA--------PPVGAMSTYLSRLYAGEPFQELKAAAKGAVSLLPSPFQDGAKRAR 235

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           +  + M  G   TLFE+LG  YIGP+DGH+++ L+ +L  VK+ + TGP+LIH +T+KG+
Sbjct: 236 DILKHMTIGG--TLFEQLGFSYIGPIDGHDMEQLLNVLRTVKD-RATGPILIHAITQKGK 292

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE ++DKYHGVAKF+  +G+Q K+ +   SYT  FA ALIAEA  D  +VA+ AAM
Sbjct: 293 GYAPAEASSDKYHGVAKFNVVSGQQQKTPSNAPSYTKVFANALIAEASEDDKIVAVTAAM 352

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             GTGL++F + +P+R FDVGIAEQHAVTF AG+A  G+KPFCA+YS+F+QR YDQVVHD
Sbjct: 353 PDGTGLDIFEKHYPSRTFDVGIAEQHAVTFCAGMAAGGMKPFCALYSTFLQRGYDQVVHD 412

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V LQ+LPVRFA+DRAGLVGADG TH GSFD++F+  LP++VVMA +DEAEL HMVATA +
Sbjct: 413 VALQRLPVRFAIDRAGLVGADGATHAGSFDISFLTNLPDIVVMAAADEAELMHMVATARS 472

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
           IDDRPS FR+PRG G+GV+LP   KG  LE+GKGRI+ +G ++A+L +G  +Q  L A+ 
Sbjct: 473 IDDRPSAFRFPRGEGVGVDLP--EKGRVLEIGKGRIIQQGSKIAILSFGARLQEVLKAAD 530

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            L   G++ T+ADARF KPLD  +I  L   H+ LIT+EEG +GGFGSHV Q L  +G+ 
Sbjct: 531 SLSLRGIKPTIADARFAKPLDKQMILDLVSKHDALITIEEGVVGGFGSHVQQLLLDEGIF 590

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           D   K+R +VLPD ++D  +P +    A ++ + I   VF+IL
Sbjct: 591 DHGFKFRSMVLPDTFLDQDTPKNMYENAAMSANDIEEKVFDIL 633


>gi|390167485|ref|ZP_10219472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
 gi|389589893|gb|EIM67901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
          Length = 641

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/641 (58%), Positives = 457/641 (71%), Gaps = 14/641 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD + +P  ++ L    L+QLADELR +VI  V  TGGHLGS LGV+ELT A
Sbjct: 2   NDRPSTPLLDQVVWPADLRKLQPDRLRQLADELRQEVISAVGVTGGHLGSGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H
Sbjct: 62  IHYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV   ++G+    +AVIGDG+M+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAALGFAVANRMQGKPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+RL S+R    LR++AK + +++  P+H  A K DE+
Sbjct: 181 DMSIA--------PPVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM    G TLFEELG YY+GP+DGHN+D L+ +LE V++    GP L+HVVT+KG+GY
Sbjct: 233 ARGM--AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDA-AEGPCLVHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEAE D  + AI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVITGAQAKAPPGPPSYTGVFAKALIAEAERDPAICAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVHTCAVHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P   RYPRGNG G+ LP   +   LE+GKGRI+ EG +VA+L  GT ++  L A+  L
Sbjct: 470 DGPIAVRYPRGNGTGIALPATPE--RLEIGKGRIVREGRQVAILSLGTRLEEALKAAETL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD ALIR L  +HEV +T+EEGSIGG G+HV+   +  GL+D 
Sbjct: 528 EAKGLSTTVADLRFAKPLDEALIRRLLTTHEVAVTIEEGSIGGLGAHVLTMASDQGLIDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +K R + LPD + D   P +Q A A L    I  TV   L
Sbjct: 588 GLKLRTMRLPDIFQDQDKPENQYADARLDAGAIVDTVLTAL 628


>gi|384261859|ref|YP_005417045.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
           photometricum DSM 122]
 gi|378402959|emb|CCG08075.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
           photometricum DSM 122]
          Length = 640

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/643 (57%), Positives = 467/643 (72%), Gaps = 12/643 (1%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S  P TPLLDT+  P  ++ L+  +L+QLA E+RA++I  VS TGGHL + LGV+ELTVA
Sbjct: 2   STTPETPLLDTLRDPADIRRLTTAQLEQLAHEVRAEMIDIVSHTGGHLSAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VFN P+DR++WDVGHQ+YPHKI+TGRR++M ++RQ  G+SGFT R ES YD FG GH
Sbjct: 62  LHHVFNTPEDRLIWDVGHQSYPHKIVTGRRERMRSLRQGGGISGFTLREESPYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMA   +L G    V+AVIGDG+M+AG AYEAMNNAG + S +IVILNDN 
Sbjct: 122 SSTSISAGLGMAAAAELLGDDRLVIAVIGDGSMSAGMAYEAMNNAGAMKSRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGA+S+ LSRL S+     +R++AK V   +  P+   A + +EY
Sbjct: 181 DMSIA--------PPVGAMSAYLSRLLSSNSWLSIRDLAKEVASHLPPPLERTARRAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           AR +++G G+TLFEELG YY+GP+DGH +D LV +L  V++ +  GPVLIHVVT KG+GY
Sbjct: 233 ARSIMTG-GNTLFEELGFYYVGPIDGHRMDHLVPVLRNVRDGRRDGPVLIHVVTRKGKGY 291

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV++F+  TG Q K   +  SYT  F ++L+ EA  D  +VAI AAM  
Sbjct: 292 APAEAAPDKYHGVSRFNIVTGVQDKGKPQAPSYTNVFGKSLLTEAIRDPRIVAITAAMPS 351

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R +DVGIAEQHAVTFAAGLACEGL+PF A+YS+F+QRA+DQVVHDV 
Sbjct: 352 GTGLDKFAETFPDRTYDVGIAEQHAVTFAAGLACEGLRPFVAMYSTFLQRAFDQVVHDVA 411

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVR A+DRAG VGADG TH G FD+ F+ C+PN+V+M  +DEAEL  MVATAA  D
Sbjct: 412 LQNLPVRIAVDRAGFVGADGATHGGVFDMAFLGCIPNLVIMCAADEAELARMVATAALYD 471

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P+  RYPRG G+GVE+P   +  PL +GKGR++ EG+ VALL  GT +  CLAA+  L
Sbjct: 472 DGPTVLRYPRGEGVGVEIPDAPE--PLAIGKGRVVREGKGVALLSIGTRLHDCLAAAEQL 529

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KPLD  LI  LA++HEVL+ VEEGSIGGFGS VV  LA  GLLD 
Sbjct: 530 AARGLSPTVADARFAKPLDWDLIEGLARTHEVLVLVEEGSIGGFGSLVVTGLANRGLLDN 589

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +K R L +PDR+ +H +P  Q A+AG+  S I  TV   LG+
Sbjct: 590 GLKTRILCIPDRFFEHDTPEAQCAKAGIDASAILDTVLAALGR 632


>gi|296282072|ref|ZP_06860070.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium
           bathyomarinum JL354]
          Length = 643

 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/649 (56%), Positives = 461/649 (71%), Gaps = 14/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S+RP TPLLD +N P  ++ L   +L+QLADELR ++I  V  TGGHLGS LGV+ELTVA
Sbjct: 5   SERPETPLLDQVNLPADLRKLERGKLRQLADELRTEMIDAVGTTGGHLGSGLGVVELTVA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HY+FN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 65  IHYIFNTPEDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAG+G A+   L+ +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN 
Sbjct: 125 SSTSISAGIGFAMANKLQDKPGRAIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+R+ S+     LR +A  V K++   +H    K +E+
Sbjct: 184 DMSIA--------PPVGGLSAYLARVVSSGEYLGLRSLASKVAKKMHRRIHSSLGKAEEF 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            RGM++G   TLFEELG YY+GP+DGHN+D L+ +LE V+++   GPVLIHVVTEKG+GY
Sbjct: 236 TRGMVTGG--TLFEELGFYYVGPIDGHNLDHLIPVLENVRDSDQ-GPVLIHVVTEKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            +AE+A+DKYHGV+KFD  TG+Q KSS    +Y   F E L   AE DK +VAI AAM  
Sbjct: 293 KFAEQASDKYHGVSKFDVITGEQKKSSGGPPNYQNVFGETLAKLAETDKRIVAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F +  P R FDVGIAEQH VTFAAGLA +G++PF AIYS+F+QRAYDQVVHDV 
Sbjct: 353 GTGVDKFAKAHPERTFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMA +DEAEL HM  TAA  D
Sbjct: 413 IQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAAADEAELAHMTYTAAEYD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P  FRYPRG G GVE+P   K   LE+GKGRI+ EG +VA+L  GT +   L A+  L
Sbjct: 473 DGPIAFRYPRGAGTGVEIP--EKLEKLEIGKGRIVKEGSKVAILSLGTRLGEALDAAEQL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD  LI    + H+V++T+EE +IGG G+HV+ F +  GLLD 
Sbjct: 531 EARGLSTTVADMRFAKPLDTVLIEKAMRDHDVVVTIEEAAIGGLGAHVLTFASDSGLLDE 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            +K R + LPD + D   P  Q  +AGL  ++I  TV   L      +E
Sbjct: 591 GLKVRTMRLPDIFQDQDDPKKQYDEAGLNAANILDTVLAALRHNSAGVE 639


>gi|103487835|ref|YP_617396.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
 gi|118595621|sp|Q1GQK9.1|DXS_SPHAL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|98977912|gb|ABF54063.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
          Length = 642

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/651 (56%), Positives = 457/651 (70%), Gaps = 18/651 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLDT++ P  ++ L   +L+Q ADELRA++I  V  TGGHLGS LGV+ELT A
Sbjct: 2   TDRPHTPLLDTVDVPADLRKLKPEDLRQFADELRAEMISAVGTTGGHLGSGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P+D+++WDVGHQ YPHKI+TGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  IHYVFDTPRDKLVWDVGHQCYPHKIITGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+   LK      +AVIGDG+M+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAALGFAIANKLKDEPGRAIAVIGDGSMSAGMAYEAMNNAKQAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L++L S+RP  ELRE+A+   +++  P+H+ A K DEY
Sbjct: 181 DMSI--------APPVGGLSAYLAKLVSSRPFLELREIARRFARKLPEPLHKAAKKTDEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM    G TLFEELG YY+GP+DGHN+D L+ ILE V+++   GPVLIH VT+KG+GY
Sbjct: 233 ARGM--AMGGTLFEELGFYYVGPIDGHNLDHLIPILENVRDSDH-GPVLIHAVTKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG+Q K+     +Y   F E L   AE DK +VAI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVITGEQAKAPPGPPAYQNVFGETLAKLAETDKRIVAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F +  P R FDVGIAEQHAVTFAAGLA +G++PF AIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGVDKFAKVHPDRSFDVGIAEQHAVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFD+T++A LPNMVVMA +DEAEL HM  TAA  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMTYTAAEHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
             P  FRYPRGNG GV LP     +P  LE+GKGR++ EG+ VA+L  GT +   L A+ 
Sbjct: 470 AGPIAFRYPRGNGTGVALP----AVPQKLEIGKGRVVREGKTVAILSLGTRLAEALKAAD 525

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            LE+ GL  +V D RF KPLD  LIR    +HEV +TVEEGSIGG G+HV+   + +GL+
Sbjct: 526 TLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLI 585

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
           D  +K R L LPD + D   P  Q   AGL    I  TV   L      +E
Sbjct: 586 DAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKALRHNSAGVE 636


>gi|349687975|ref|ZP_08899117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           oboediens 174Bp2]
          Length = 664

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/653 (56%), Positives = 472/653 (72%), Gaps = 31/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 8   PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 68  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 127

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 128 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 187

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 188 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 238

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 239 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 296

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 297 HGYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAA 356

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F R +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 357 MPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 416

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ 
Sbjct: 417 DVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSI 476

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ELP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 477 AFDEGPIGLRYPRGGGLGLELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPR 534

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +   L A+ +L + GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+
Sbjct: 535 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 594

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             LA+ GLLD  V++RP+ LPDR+IDH + A Q  +AGL  + I  T    LG
Sbjct: 595 THLAKTGLLD-RVRFRPMTLPDRFIDHNTQAAQYHEAGLDAAAITNTALEALG 646


>gi|384921844|ref|ZP_10021805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
 gi|384464259|gb|EIE48843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
          Length = 641

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/643 (57%), Positives = 464/643 (72%), Gaps = 18/643 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++ P  +K +S  EL+QLA ELRA+ I  VS+TGGHLG+ LGV+ELTVALH 
Sbjct: 5   PDTPLLDRVSAPADLKRMSDAELEQLAHELRAETIAAVSQTGGHLGAGLGVVELTVALHA 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P+D+++WDV HQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YDCFG GHSST
Sbjct: 65  VFDTPRDKLIWDVSHQAYPHKILTGRRDRIRTIRQQGGLSGFTKRSESPYDCFGAGHSST 124

Query: 192 SISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           SISA LG AV RDL G  +    + +AVIGDGAM+AG A+EAMNNAG+L   +IVILNDN
Sbjct: 125 SISAALGFAVARDLGGTTDTGAGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVILNDN 184

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
            ++S+          P GA+SS LSRL +  P ++L+  AKG    +  P+ E A +  E
Sbjct: 185 -EMSIAA--------PTGAMSSYLSRLYAEAPFQDLKVAAKGAVALLPPPLREGAKRAKE 235

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
             +GM    G TLFEELG  Y+GP+DGH++  L+ +L  V++ + TGP+LIH +T+KG+G
Sbjct: 236 MIKGM--AVGGTLFEELGFSYLGPIDGHDLHQLLPVLRTVRD-RATGPILIHALTKKGKG 292

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE +AD+ H  AKFD +TG+Q K+ +   SYT+ FA+ L   AEVD  + A+ AAM 
Sbjct: 293 YAPAEGSADRGHARAKFDVSTGEQKKAPSNAPSYTSVFAKELTRLAEVDPRICAVTAAMP 352

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTGL+L   RFP R FDVGIAEQH VTFAAGLA  GL+PFCA+YS+F+QR YDQVVHDV
Sbjct: 353 DGTGLDLMAERFPARVFDVGIAEQHGVTFAAGLAAGGLRPFCAMYSTFLQRGYDQVVHDV 412

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +Q+LPVRFA+DRAGLVGADG TH G++D+ FM  LP MVVMA +DEAEL HMVATAAA 
Sbjct: 413 AIQRLPVRFAIDRAGLVGADGATHAGAYDIAFMTNLPGMVVMAAADEAELKHMVATAAAY 472

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           D  P  FRYPRG G GV++P   +G  LE+G+GR++ +G RVALL +GT +   LAA+  
Sbjct: 473 DSGPIAFRYPRGEGRGVDMP--EQGEILEIGRGRLIRQGARVALLSFGTRLGETLAAAER 530

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L++ G+  TVADARF KPLD  LI  LA +HE L+T+EEG+IGGFGSHV Q LA +G+ D
Sbjct: 531 LDARGIAATVADARFAKPLDRDLILRLATTHEALLTIEEGAIGGFGSHVAQLLADEGIFD 590

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             +K+R +VLPD +IDH SP    A AGL  + I   V   LG
Sbjct: 591 HGLKFRSMVLPDSFIDHASPDAMYAAAGLDAARIEEKVLTTLG 633


>gi|149202565|ref|ZP_01879537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
 gi|149143847|gb|EDM31881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
          Length = 643

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/646 (57%), Positives = 461/646 (71%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +  P  +K  S  +L QLA ELR++ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 3   SDRPQTPLLDQVASPADLKRFSDSQLVQLAHELRSETISAVSETGGHLGAGLGVVELTVA 62

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH+VF+AP+D+I+WDV HQ YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  H
Sbjct: 63  LHHVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAH 122

Query: 189 SSTSISAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGAM+AG A+EAMNNAG+L   +IVIL
Sbjct: 123 SSTSISAALGFAVARDLGGNCPSGLGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRLIVIL 182

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +
Sbjct: 183 NDN-EMSIA--------PPVGALSSYLSRLYAEAPFQDFKAAAKGAISLLPPPFQEGARR 233

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +G+    G TLFEELG  Y+GP+DGH++  L+ +L  VK  + TGP+LIHV+T+K
Sbjct: 234 AKDMLKGL--AVGGTLFEELGFSYVGPIDGHDLHQLLPVLRTVK-ARATGPILIHVLTKK 290

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A D  H  AKFD  TG+Q KS +   SYT  FA+AL+A A  D  + A+ A
Sbjct: 291 GKGYGPAERARDGGHATAKFDVLTGEQRKSPSNAPSYTGVFAKALLAHAAQDDKICAVTA 350

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+R FDVGIAEQHAVTF+AGLA  GLKPFCA+YS+F+QR YDQVV
Sbjct: 351 AMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFSAGLAAGGLKPFCALYSTFLQRGYDQVV 410

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FD  F+A LP  VVMA +DEAEL HMVATA
Sbjct: 411 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAFLANLPGFVVMAAADEAELVHMVATA 470

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D+ P  FRYPRG G+GV +P   +G PLE+GKGRI+  G RVA+L +GT +   L A
Sbjct: 471 AAHDEGPIAFRYPRGEGMGVTMP--ERGEPLEIGKGRIIQTGARVAILSFGTRLSEVLKA 528

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           S  L + G+  T+ADARF KPLD ALI  L ++HE +ITVEEG+IGGF SHV  FLA+  
Sbjct: 529 SEALRARGITPTIADARFAKPLDEALILDLVQNHEAMITVEEGAIGGFASHVSHFLAEAQ 588

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D   K+R +VLPD +ID  S  D  A A L  + I A V ++LG
Sbjct: 589 VFDRGFKFRSMVLPDTFIDQASAEDMYAVARLNAADIEARVLDVLG 634


>gi|149915301|ref|ZP_01903829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149811022|gb|EDM70861.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 642

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/649 (57%), Positives = 460/649 (70%), Gaps = 18/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +  P  +K  S  +L  LA +LRA+ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   SNRPDTPLLDLVQSPADIKRFSDAQLVGLAHDLRAETISCVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDV HQ+YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDAPRDKIIWDVSHQSYPHKILTGRRDRIRTLRQRDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGAM+AG A+EAMN+AG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGASETGHGDAIAVIGDGAMSAGMAFEAMNHAGHLKKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P +E +  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSSYLSRLYAGEPFQEFKAAAKGAVSLLPPPFQEGARR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +G+  G   TLFEELG  YIGP+DGH++D L+ +L  V+  + TGP LIHV+T K
Sbjct: 233 AKDMLKGLTVGG--TLFEELGFSYIGPIDGHDMDQLLPVLRTVR-ARATGPTLIHVITRK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE   D  H  AKFD  TG+Q K+ +   SYT  FA+AL+  A  D  + AI A
Sbjct: 290 GKGYGPAEARRDGGHATAKFDLVTGEQKKAPSNAPSYTRVFADALLEHAAQDDRICAITA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+LF +R+P+RCFDVGIAEQHAVTFAAGLA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPEGTGLDLFEKRYPSRCFDVGIAEQHAVTFAAGLAAGGMKPFCALYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADGPTH G+FDV ++A LP   VMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGPTHAGAFDVAYLANLPGFTVMAAADEAELKHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
            A D+ P  FRYPRG G GVE+P   +G  LE+GKGR++ +G RVALL +GT +   + A
Sbjct: 470 VAHDEGPIAFRYPRGEGQGVEMP--ERGEVLEIGKGRMIQQGSRVALLSFGTRLGEVMKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           S  L + G+  +VADARF KPLD  LI  LA  HE LIT+EEG++GGFGSHV Q LA   
Sbjct: 528 SEALRARGITPSVADARFAKPLDRDLILGLAARHEALITIEEGAVGGFGSHVAQLLADHA 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           + D  +K+R +VLPD +ID  SP D  A AGL   HI A V ++LG  R
Sbjct: 588 VFDDGLKFRSMVLPDTFIDQASPEDMYATAGLDADHIEAKVLDVLGIAR 636


>gi|294012272|ref|YP_003545732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
           UT26S]
 gi|292675602|dbj|BAI97120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
           UT26S]
          Length = 644

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/641 (58%), Positives = 456/641 (71%), Gaps = 14/641 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD + +P  ++ L    L+QLADELR +VI  V  TGGHLGS LGV+ELT A
Sbjct: 5   NDRPSTPLLDQVVWPADLRKLQPDRLRQLADELRQEVISAVGVTGGHLGSGLGVVELTTA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H
Sbjct: 65  IHYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV   ++G+    +AVIGDG+M+AG AYEAMNNA    + +IVILNDN 
Sbjct: 125 SSTSISAALGFAVANRMQGKPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+RL S+R    LR++AK + +++  P+H  A K DE+
Sbjct: 184 DMSIA--------PPVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEF 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM    G TLFEELG YY+GP+DGHN+D L+ +LE V++    GP L+HVVT+KG+GY
Sbjct: 236 ARGM--AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDA-AEGPCLVHVVTQKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEAE D  + AI AAM  
Sbjct: 293 APAEAAADKYHGVQKFDVITGAQAKAPPGPPSYTGVFAKALIAEAERDPAICAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV 
Sbjct: 353 GTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV T A  D
Sbjct: 413 IQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVHTCAVHD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P   RYPRGNG G+ LP   +   LE+GKGRI+ EG +VA+L  GT ++  L A+  L
Sbjct: 473 DGPIAVRYPRGNGTGIALPATPE--RLEIGKGRIVREGRQVAILSLGTRLEEALKAAETL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD ALIR L  +HEV +T+EEG++GG G+HV+   +  GL+D 
Sbjct: 531 EAKGLSTTVADLRFAKPLDEALIRRLLTTHEVAVTIEEGAVGGLGAHVLTMASDQGLIDN 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +K R + LPD + D   P  Q A A L    I  TV   L
Sbjct: 591 GLKLRTMRLPDIFQDQDKPEKQYADARLDAGAIVDTVLTAL 631


>gi|219114431|ref|XP_002176386.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
           [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402632|gb|EEC42622.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
           [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 730

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/670 (55%), Positives = 472/670 (70%), Gaps = 40/670 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+LD++ YP  MKNL +R+LKQLA+ELR +V+ +VSKTGGHL SSLGV ELTVALHYVF+
Sbjct: 54  PILDSVKYPSDMKNLDMRQLKQLANELRWEVLESVSKTGGHLSSSLGVNELTVALHYVFD 113

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+D I+WDV HQ YPHKILTGRRD+M T+RQ+ G+SGF KR ESEYD FG GHSSTSIS
Sbjct: 114 MPEDDIIWDVSHQCYPHKILTGRRDRMSTLRQSGGISGFCKRKESEYDSFGAGHSSTSIS 173

Query: 195 AGLGMAVGRD-LKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
              GM++G+  L  R+NN +AVIGDGA+T G AYEAMN+AGYL + MIVILNDN QVSLP
Sbjct: 174 VAQGMSIGKSILNKRQNNCIAVIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLP 233

Query: 254 TATLD-GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           T T   G I P   LS+  S L  ++P ++ R  AK   K +   + ++  ++DEYARG+
Sbjct: 234 TGTPSAGGIVPASQLSTYTSNLLVSKPFQDFRMFAKNFNKLLPEGVQDVNKRIDEYARGI 293

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           ++G   TLFEELG +Y+GPVDGH++D+L+ ILE+++++ +T PVL+HV T KG GYP AE
Sbjct: 294 VAGG--TLFEELGFFYVGPVDGHDLDNLIPILEKLRDSPSTKPVLLHVKTTKGYGYPPAE 351

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           +A+D+ HGVAKF+  TGKQ KS      S T+ FA ALI  A  D+ +V I AAM GGTG
Sbjct: 352 QASDRMHGVAKFNLGTGKQIKSKKPIAPSLTSIFANALIDAATEDRSIVGITAAMPGGTG 411

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           +++F RRFP R FDVGIAEQHAVT  AG+ACEGLKPF  IYS+FMQR YDQVVHDV +Q 
Sbjct: 412 MDIFGRRFPKRTFDVGIAEQHAVTMGAGMACEGLKPFVCIYSTFMQRGYDQVVHDVAIQN 471

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVR  +DRAGLVG DGPTH G +D+++M C+PN+++MAPSDE EL +MVAT AA +D P
Sbjct: 472 LPVRMVLDRAGLVGNDGPTHHGCYDLSYMGCIPNLIIMAPSDEVELRNMVATQAAFNDGP 531

Query: 552 SCFRYPRGNGIGV--------------ELPPGNKGIPLEVGKGRIL-------------- 583
           +  RYPRG G G+              E+P   KG  L +GKGRI+              
Sbjct: 532 TVLRYPRGTGYGLETLKNTFGYTFEGDEIP--TKGEVLPIGKGRIVRRPGGFNQNQSSTR 589

Query: 584 --IEGERVALLGYGTAVQSCLAASALLE--SNGLRLTVADARFCKPLDHALIRSLAKSHE 639
                +RVA+L  GT +   L A+  +E     L +TVAD RF KPLD  L+R LA  H 
Sbjct: 590 GKSRKDRVAVLSLGTRLHEALVAAKEVEDIDPTLGVTVADGRFMKPLDVDLVRELADEHS 649

Query: 640 VLITVEEGSIGGFGSHVVQFLAQDGLL-DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 698
           VLIT+EEGSIGGFG HV+ FL+ DG+L DG +K+RP+V+PD   + G+  +Q  QAGL  
Sbjct: 650 VLITIEEGSIGGFGDHVLHFLSLDGILDDGELKFRPMVIPDTLFEAGTQYEQYEQAGLNS 709

Query: 699 SHIAATVFNI 708
            HI  T+  +
Sbjct: 710 EHIRGTILRL 719


>gi|310814825|ref|YP_003962789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
           Y25]
 gi|385234996|ref|YP_005796338.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
           vulgare WSH-001]
 gi|308753560|gb|ADO41489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
           Y25]
 gi|343463907|gb|AEM42342.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
           vulgare WSH-001]
          Length = 644

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/645 (58%), Positives = 467/645 (72%), Gaps = 19/645 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD ++ P  +K LS  +L +LA ELRA+ I  VS+TGGHLG+ LGV+ELTVALH
Sbjct: 6   RPSTPLLDRVSSPADLKRLSDADLVRLAGELRAETISAVSETGGHLGAGLGVVELTVALH 65

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VF+AP+D+I+WDV HQ+YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  HSS
Sbjct: 66  AVFDAPRDKIIWDVSHQSYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAHSS 125

Query: 191 TSISAGLGMAVGRDL-----KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
           TSISA LG AV RDL     +G   + +A+IGDG+M+AG A+EAMNNAG L   M VILN
Sbjct: 126 TSISAALGFAVARDLGGATPEGAIGDTIAIIGDGSMSAGMAFEAMNNAGDLKKRMFVILN 185

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGALSS LSRL +  P ++L+  AKG    +  P+ E A + 
Sbjct: 186 DN-EMSIA--------PPVGALSSYLSRLYAGGPFQDLKAAAKGAVNMLPEPLREGAKRA 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
            E  + M  G   T+FEELG  Y+GP+DGH+++ L+A+L  V + + TGPVLIH +T+KG
Sbjct: 237 KEMLKHMTVGG--TMFEELGFSYLGPIDGHDMEQLLAVLRTVHD-RATGPVLIHAITQKG 293

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GY  AE A DK HGV KFD  TG+Q K  +   SYT+ FA ALI +AE D  +VAI AA
Sbjct: 294 KGYAPAEAARDKGHGVGKFDVVTGEQAKVKSNAPSYTSVFANALIEQAEKDSRIVAITAA 353

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F+ RF  RCFDVGIAEQHAVTFAAGLA  G+KPFCA+YS+F+QR YDQVVH
Sbjct: 354 MPDGTGLDKFMVRFADRCFDVGIAEQHAVTFAAGLAAGGMKPFCALYSTFLQRGYDQVVH 413

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q+LPVRFA+DRAGLVGADG TH G+FD+ FMA LP MVVMA +DEAEL  MVATAA
Sbjct: 414 DVAIQRLPVRFAIDRAGLVGADGATHAGAFDIAFMANLPGMVVMAAADEAELVRMVATAA 473

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             +D P  FR+PRG G+GVE+P   +  PLE+GKGRI   G RVA+L +GT +    AA+
Sbjct: 474 QHNDGPIAFRFPRGEGVGVEIPADAQ--PLEIGKGRITQAGARVAILSFGTRLSEAEAAA 531

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            LL + G+  T+ADARF KPLD  +I  LA+ HEVLIT+EEG+IGGFGSHV Q LA+ G+
Sbjct: 532 ELLSARGITPTIADARFAKPLDRDMILRLAREHEVLITIEEGAIGGFGSHVAQLLAEAGV 591

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            D  +K+R +VLPD +ID  +P D    AGL  + IA  V + LG
Sbjct: 592 FDHGLKFRSMVLPDIFIDQANPRDMYDVAGLNANDIANKVLSALG 636


>gi|338708492|ref|YP_004662693.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
 gi|336295296|gb|AEI38403.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
          Length = 650

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/650 (57%), Positives = 459/650 (70%), Gaps = 14/650 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  +++L   EL+QLADELR + I  V  TGGHLGS LGVIELT+ALHYVF
Sbjct: 7   TPLLDTIKTPSDLRHLERMELRQLADELRKETISAVGVTGGHLGSGLGVIELTIALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  DTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L  +K+  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSHKKDKAVAIIGDGSMTAGMAYEAMNNAKAAGERLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLAIAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G TLFEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTLFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ FAE LI EA+ D  +VAI AAM  GTGL+
Sbjct: 295 AEDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFAERLIKEAQADDKIVAITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA    KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAHYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDEAEL  MV T A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDEAELSSMVHTMAQYDKGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNGIGV LP   +   L +GKGR+L  G+ VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGIGVTLPENPE--TLTIGKGRLLRRGKTVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD  L R L K+H+V++TVEEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDETLTRHLLKTHKVIVTVEEGALGGFATQVLTMASDEGLMDEGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFKS 723
            L LPDR+     P  Q A+AGL    I A V + L +  + +E++   +
Sbjct: 593 TLRLPDRFQPQDKPEIQYAEAGLDADGIVAAVISALHRNAKPVELVEITA 642


>gi|357977645|ref|ZP_09141616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. KC8]
          Length = 641

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/648 (57%), Positives = 459/648 (70%), Gaps = 14/648 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S+RP TPLLDT++ P  ++ L   +L  L  ELR +++  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SERPKTPLLDTVDTPGDLRKLKPEQLGDLVRELRQEMVSAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P D ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  LHYVFNTPDDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV   L G     +AVIGDGAM+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAALGFAVANKLAGDPGKAIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+R+ S+RP   LR++AK + +++  P+H+ A K DE+
Sbjct: 181 DMSIA--------PPVGGLSAYLARMVSSRPFLSLRDLAKRLARKLPRPLHDAARKTDEF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM  G   TLFEELG YY+GP+DGHN+D L+ ILE V++    GP+LIHVVT+KG+GY
Sbjct: 233 ARGMTMGG--TLFEELGFYYVGPIDGHNLDHLIPILENVRDAGE-GPILIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEA  D  V AI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVVTGAQAKAPPGPPSYTGVFAQALIAEATRDDKVCAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R FDVGIAEQHAVTFAAGL+ +G +PFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKFATLFPDRSFDVGIAEQHAVTFAAGLSAQGYRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFD+T++A LPN VVMA +DEAEL HMV T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGATHAGSFDITYLASLPNFVVMAAADEAELTHMVHTMALHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRGNG GV +P   +   L +GKGR++ EG+ VA+L  GT +     A+  L
Sbjct: 470 SGPIAVRYPRGNGTGVGIPTTPE--RLAIGKGRLVREGKTVAILSLGTRLGEAEKAADQL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  +VAD RF KPLD ALIR+L  +HEV +T+EEGS+GG G+HV+   + +GL+DG
Sbjct: 528 EALGLSTSVADLRFAKPLDEALIRTLLTTHEVAVTIEEGSVGGLGAHVLTLASDEGLIDG 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            +K R + LPD + DH  P  Q A+AGL    I AT    L +    L
Sbjct: 588 GLKLRTMRLPDIFQDHEKPETQYAEAGLDAEAIVATALAALRRNNTGL 635


>gi|255262871|ref|ZP_05342213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
 gi|255105206|gb|EET47880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
          Length = 642

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/646 (56%), Positives = 463/646 (71%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD +  P  MK++S  EL +LADE+R + I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPHTPTLDRVVTPTDMKSMSAAELCRLADEVRQETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ PKDRI+WDV HQ YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDTPKDRIIWDVSHQCYPHKILTGRRDRIRTLRQRDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG AYEAMNNAG+L   MIVIL
Sbjct: 122 SSTSISAALGFAVARDLGGAPEHGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGA+SS LSRL +  P +EL+  AKG    +  P    A +
Sbjct: 182 NDN-EMSIA--------PPVGAMSSYLSRLYAGAPFQELKAAAKGAVSLLPEPFQLGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +GM  G   TLFEELG  Y+GP+DGH+++ L+ +L  VK+ + TGP+LIH +T+K
Sbjct: 233 AKEMLKGMTVGG--TLFEELGFSYLGPIDGHDMEQLLGVLRTVKD-RATGPILIHAITKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A+DK HGV+KFD  TG+Q K+ +   SYT+ F++AL+  A  D  + A+ A
Sbjct: 290 GKGYAPAEAASDKGHGVSKFDMVTGEQKKAPSNAPSYTSVFSKALLDLAAKDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL  F+ R+ +RCFDVGIAEQHAVTF+AGLA  G++PFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLKQFMDRYASRCFDVGIAEQHAVTFSAGLAAGGMRPFCALYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FDV F++ LP  VVMA +DEAEL  MV TA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVGFLSNLPGFVVMAAADEAELTRMVVTA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           A  D+ P  FR+PRG G+GVE+P   K  P+E+GKGR++ EG+ VA+L +GT +Q   AA
Sbjct: 470 AQHDEGPIAFRFPRGEGVGVEIPEDAK--PIEIGKGRMIREGKGVAILSFGTRLQEVEAA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              L + G+  T+ADARF KPLD  +I  LA  HE LITVEEG+IGGFGSHV Q LA +G
Sbjct: 528 CEALAARGITPTIADARFAKPLDREMILKLAADHEALITVEEGAIGGFGSHVAQLLADEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID   P D  + AGL   HI A V ++LG
Sbjct: 588 VFDHGLKYRSMVLPDTFIDQAGPRDMYSVAGLNSEHIEAKVLDVLG 633


>gi|338707067|ref|YP_004661268.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
 gi|336293871|gb|AEI36978.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
          Length = 649

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/648 (57%), Positives = 458/648 (70%), Gaps = 14/648 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  +++L   EL+QLADELR + I  V  TGGHLGS LGVIELT+ALHYVF
Sbjct: 7   TPLLDTIKTPSDLRHLERMELRQLADELRKETISAVGVTGGHLGSGLGVIELTIALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  DTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L  +K+  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSHKKDKAVAIIGDGSMTAGMAYEAMNNAKAAGERLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLAIAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G TLFEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTLFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ FAE LI EA+ D  +VAI AAM  GTGL+
Sbjct: 295 AEDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFAERLIKEAQADDKIVAITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA    KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAHYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDEAEL  MV T A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDEAELSSMVHTMAQYDKGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNGIGV LP   +   L +GKGR+L  G+ VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGIGVTLPENPE--TLTIGKGRLLRRGKTVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD  L R L K+H+V++TVEEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDETLTRHLLKTHKVIVTVEEGALGGFATQVLTMASDEGLMDEGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            L LPDR+     P  Q A+AGL    I A V + L +  + +E++  
Sbjct: 593 TLRLPDRFQPQDKPEIQYAEAGLDADGIVAAVISALHRNAKPVELVEI 640


>gi|114329068|ref|YP_746225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317242|gb|ABI63302.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 669

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/660 (56%), Positives = 474/660 (71%), Gaps = 33/660 (5%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP LD + YP  ++N+S  +L+ +ADELRA+ +  VS TGGHLG++LGVIELTVA+H VF
Sbjct: 12  TPTLDRVRYPSDLRNMSSEQLRAVADELRAETVDAVSVTGGHLGAALGVIELTVAIHAVF 71

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG GHSSTSI
Sbjct: 72  DTPSDRLIWDVGHQAYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSI 131

Query: 194 SAGLGMAVGRDLK-------GRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           SAGLGMAV RDL+           +V+AVIGDGAM+AG  YEAMNNAG L S ++VILND
Sbjct: 132 SAGLGMAVARDLRRAAGEVGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILND 191

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N  +S+         PPVGA+S+ LSRL S+R    LR++A  + +     +   A + +
Sbjct: 192 N-DMSI--------APPVGAMSAYLSRLLSSRSFLNLRDLAGKMARHFPRGIERTARRAE 242

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EYARG+++G   TLFEELG YY+GP+DGHN+D L+ +L  V++ + TGP+L+H +T KG 
Sbjct: 243 EYARGILTGG--TLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAEETGPILVHAITRKGH 300

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFK------SSARTQSYTTYFAEALIAEAEVDKDVV 420
           GY  AE +ADKYH V++F+  TG+Q K      +     +YT  FAEALIA AE +  VV
Sbjct: 301 GYAPAEASADKYHAVSRFNVVTGEQIKPAPVPGAKPAPPTYTKVFAEALIAAAEDNPRVV 360

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AI+AAM  GTGL+ F +RFP RCFDVGIAEQHAVTFAAGLA EG+ PFCA+YS+F+QR Y
Sbjct: 361 AINAAMPSGTGLDAFEKRFPDRCFDVGIAEQHAVTFAAGLAVEGMVPFCALYSTFLQRGY 420

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ ++ CLP M++M+PSDEAEL H 
Sbjct: 421 DQLVHDVAIQHLPVRFAIDRAGLVGADGATHAGSFDMAYLGCLPGMMIMSPSDEAELVHA 480

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI----PLEVGKGRILIEGER-VALLGYG 595
           VAT AA D  PS  RYPRG G+GV LP   KG      L +G+GRI+ EG   +A+L  G
Sbjct: 481 VATVAAYDSGPSAVRYPRGEGVGVALPRDEKGRLRGDVLPIGRGRIVREGRSGIAILSIG 540

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           T +Q  L A+  L ++GL +TVAD RF KPLD AL+  LA+ ++VL+ VEEGSIGG+ SH
Sbjct: 541 TRLQDALLAADDLAAHGLTVTVADGRFVKPLDTALVERLARENDVLVVVEEGSIGGYASH 600

Query: 656 VVQFLAQDGLLDG----TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           V+Q LAQ GLLD      +K R ++LPDRYIDH +  +Q+ QAGL    I  TV  +L Q
Sbjct: 601 VMQHLAQAGLLDARDGHALKLRSMILPDRYIDHDTQPNQIRQAGLDHQAIRDTVLKLLEQ 660


>gi|398383548|ref|ZP_10541616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
 gi|397724564|gb|EJK85029.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
          Length = 640

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/638 (57%), Positives = 455/638 (71%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P  ++ L   +L+QLADELR + I  V  TGGHLGS LGV+ELT A+HY
Sbjct: 4   PSTPLLDTVHTPTDLRALQPDQLRQLADELRDETIAAVGVTGGHLGSGLGVVELTTAIHY 63

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSST
Sbjct: 64  VFDTPNDKLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRTESEYDPFGAAHSST 123

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG AV   ++G+    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 124 SISAALGFAVANKMQGKPGKAIAVIGDGAMSAGMAYEAMNNAQEAGNRLVVILNDN-DMS 182

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L+RL S+R    LR++AK + +++  P+H+ A K DE+ARG
Sbjct: 183 I--------APPVGGLSAYLARLVSSREFLGLRDLAKRLARKLPRPLHKAAKKTDEFARG 234

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M    G TLFEELG YY+GPVDGHN+D L+ +LE V++    GPVLIHVVT+KG+GY  A
Sbjct: 235 M--AMGGTLFEELGFYYVGPVDGHNLDQLIPVLENVRD-NAEGPVLIHVVTQKGKGYAPA 291

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEA+ D  + AI AAM  GTG
Sbjct: 292 EAAADKYHGVQKFDVITGTQAKAPPGPPSYTNVFAQALIAEAQRDPRLCAITAAMPSGTG 351

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q 
Sbjct: 352 LDKFELAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQN 411

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV T A  D  P
Sbjct: 412 LPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVHTCATHDSGP 471

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRGNG GV +P   + +P  +GKGRIL EG +VA+L  GT ++  + A+ +LE+ 
Sbjct: 472 IAVRYPRGNGTGVAMPKIPEALP--IGKGRILREGRQVAILSLGTRLEEAIKAADMLETK 529

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  +V D RF KPLD ALIR +  +HEV +T+EEG+IGG G+HV+   +  GL D  +K
Sbjct: 530 GLSASVVDLRFAKPLDEALIRRMLTTHEVAVTIEEGAIGGLGAHVLTLASDLGLTDAGLK 589

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R L LPD + D   P  Q A A L    I  TV   L
Sbjct: 590 IRTLRLPDIFQDQDKPEKQYADARLDADAIVDTVLTAL 627


>gi|339505498|ref|YP_004692918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
           149]
 gi|338759491|gb|AEI95955.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
           Och 149]
          Length = 642

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/646 (57%), Positives = 457/646 (70%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           +  P TPLLD ++ P  MK LS R+L QLADELR + +  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDTPKTPLLDLVHRPADMKGLSDRQLVQLADELRRETVSAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDTPRDKIIWDVGHQCYPHKILTGRRDRIRTLRMKGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG AYEAMNNAG+L   MIVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PP GA+SS LSRL S  P ++ +  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPTGAMSSYLSRLYSGEPFQDFKAAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFEELG  YIGP+DGH++D L+ +L  VK  + TGP++IH +T+K
Sbjct: 233 AKDMLKGM--AVGGTLFEELGFSYIGPIDGHDLDQLLPLLRTVK-ARATGPIMIHALTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TG+Q K+ +   SYT  FA++L+ EA  D  + A+ A
Sbjct: 290 GKGYAPAETARDKGHATAKFDVLTGQQTKAPSNAPSYTKVFAQSLLEEAMKDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+RCFDVGIAEQH VTF+A LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ ++A LP  VVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELKHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
            A DD P  FR+PRG G GV++P    G  LE+GKGRI+ EG RVA+L +GT +     A
Sbjct: 470 VAHDDGPIAFRFPRGEGNGVDMP--EVGEVLEIGKGRIITEGARVAILSFGTRLAEVQKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              L + G+  T+ADARF KPLD  +I  LA +HE LITVEEG+IGGFGSHV Q L+ +G
Sbjct: 528 GEALAARGITPTIADARFAKPLDRDMILDLAVNHEALITVEEGAIGGFGSHVAQLLSDEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D   K+R +VLPD +ID  SPAD  A AG+  + I   V ++LG
Sbjct: 588 VFDTGFKFRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633


>gi|399076032|ref|ZP_10751806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
 gi|398037908|gb|EJL31084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
          Length = 638

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/637 (58%), Positives = 458/637 (71%), Gaps = 14/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT++ P   +  SI ELKQLA E+RA+ I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 5   TPLLDTVSSPADTRGFSIAELKQLASEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
             PKD ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H++TSI
Sbjct: 65  ETPKDIVIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG    RD KG  N+V+AVIGDG+M+AG AYEAMN A      +IVILNDN  +S+ 
Sbjct: 125 SAALGFCAARDAKGESNSVIAVIGDGSMSAGMAYEAMNAAVDTTKRLIVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG +S+ L+ L S    R++R++ K V +++  P+ + A K +EYARGM+
Sbjct: 184 --------PPVGGMSAYLANLVSGGAYRKVRKLGKTVVEKLPSPIRDAARKAEEYARGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T FEELG +Y+GP+DGH++D LV++L   K+     PVL+HVVT+KG+GY  AE 
Sbjct: 236 TGG--TFFEELGFHYVGPIDGHDMDALVSVLNNAKHFDEK-PVLVHVVTQKGKGYAPAEG 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DK H V KFD  TG+Q K++A   SYT  FA+ LI  A VD  +VAI AAM  GTGL+
Sbjct: 293 ADDKLHAVVKFDVVTGQQHKAAAGPPSYTKVFAQELIKHAAVDDKIVAITAAMPSGTGLD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + +P R FDVGIAEQHAVTFAAGLA +G+KPF AIYS+F+QR YDQVVHDV +Q+LP
Sbjct: 353 LFGKAYPHRTFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVAIQRLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFAMDRAGLVGADGPTH G+FD+ FM  LP MV+MA +DE EL HMVATA  IDDRPS 
Sbjct: 413 VRFAMDRAGLVGADGPTHAGTFDLGFMGALPGMVLMAAADELELAHMVATAVEIDDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+G+ LP  +   PLE+GKGRI+ EG  VA++  GT +  CL A+ LL + GL
Sbjct: 473 FRYPRGEGLGLTLP--DLAAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  ++  LA+ HE +ITVEEG++GGFG+ V+Q LAQ G LD  +K R
Sbjct: 531 SATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALAQHGALDRGLKIR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LVLPD + D   P    AQAGL    I     + LG
Sbjct: 591 TLVLPDIFQDQDKPDVMYAQAGLDAEGILRGALSALG 627


>gi|110677932|ref|YP_680939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
 gi|118595488|sp|Q16CP0.1|DXS2_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|109454048|gb|ABG30253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
          Length = 642

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/643 (57%), Positives = 455/643 (70%), Gaps = 18/643 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLD ++ P  MK LS R+L QLADELR++ +  VS TGGHLG+ LGV+ELTVALH 
Sbjct: 5   PKTPLLDLVHRPADMKGLSDRQLVQLADELRSETVSAVSVTGGHLGAGLGVVELTVALHA 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P+D+I+WDVGHQ YPHKILT RRD++ T+R   GLSGFTKRSES YD FG  HSST
Sbjct: 65  VFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKGGLSGFTKRSESPYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           SISA LG AV RDL G       + +AVIGDG+M+AG AYEAMNNAG+L   MIVILNDN
Sbjct: 125 SISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILNDN 184

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
            ++S+         PP GA+SS LSRL S  P ++ +  AKG    +  P  E A +  +
Sbjct: 185 -EMSIA--------PPTGAMSSYLSRLYSGEPFQDFKAAAKGAVSLLPEPFREGAKRAKD 235

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
             +GM    G TLFEELG  YIGP+DGH++D L+ +L  VK  + TGP++IH +T+KG+G
Sbjct: 236 MLKGM--AVGGTLFEELGFSYIGPIDGHDLDQLLPLLRTVK-ARATGPIMIHALTKKGKG 292

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE A DK H  AKFD  TG+Q K+ +   SYT  FA++L+ EA  D  + A+ AAM 
Sbjct: 293 YAPAETARDKGHATAKFDVLTGQQTKAPSNAPSYTKVFAQSLLEEATKDDKICAVTAAMP 352

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTGLNLF  RFP+RCFDVGIAEQH VTF+A LA  G+KPFCA+YS+F+QR YDQVVHDV
Sbjct: 353 DGTGLNLFAERFPSRCFDVGIAEQHGVTFSAALAAGGMKPFCAMYSTFLQRGYDQVVHDV 412

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            +Q+LPVRFA+DRAGLVGADG TH GSFD+ ++A LP  VVMA +DEAEL HMVATA A 
Sbjct: 413 AIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELKHMVATAVAH 472

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DD P  FR+PRG G GV++P    G  LE+GKGRI+ EG RVA+L +GT +     A   
Sbjct: 473 DDGPIAFRFPRGEGNGVDMP--EVGEVLEIGKGRIITEGTRVAILSFGTRLAEVQKAGEA 530

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L + G+  T+ADARF KPLD  +I  L  +HE LITVEEG+IGGFGSHV Q L+ +G+ D
Sbjct: 531 LAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFD 590

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
              K+R +VLPD +ID  SPAD  A AG+  + I   V ++LG
Sbjct: 591 TGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633


>gi|149914239|ref|ZP_01902770.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149811758|gb|EDM71591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 642

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/629 (58%), Positives = 460/629 (73%), Gaps = 14/629 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S++P TPLLD +  P  ++ +  R+L +LA ELR++VI  VS+TGGHLGSSLGV+ELTVA
Sbjct: 3   SEKPHTPLLDRVAGPSDLRQMPDRDLARLAQELRSEVISAVSETGGHLGSSLGVVELTVA 62

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  H
Sbjct: 63  IHAVFSTPMDKLIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAH 122

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AVGRD+     + +AVIGDG+++AG AYEAMNNAG+    + VILNDN 
Sbjct: 123 SSTSISAALGFAVGRDMGQATGDAIAVIGDGSISAGMAYEAMNNAGHEGRRLFVILNDN- 181

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGA+SS LSRL +N PL  +  +A+G    +  PM E A +  + 
Sbjct: 182 EMSI--------APPVGAMSSYLSRLYANEPLARMASLAEGFEAAMPAPMREGAKRARQL 233

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             G+ +GSG TLFEELG  Y+GP+DGH++D L+ +L   + T+ TGPVLIH  T KG+GY
Sbjct: 234 VTGL-TGSG-TLFEELGFEYVGPIDGHDMDQLLPVLRAAR-TRATGPVLIHCCTVKGKGY 290

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE ++DKYHGVAKFD ATG Q KSS  T SYT+ F ++L  EA  D D+VA+ AAM  
Sbjct: 291 APAETSSDKYHGVAKFDVATGTQTKSSGGTPSYTSIFGQSLTEEAARDPDIVAVTAAMPS 350

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL++   RFP R FDVGIAEQHAVTFAAG+A  GLKPFCAIYS+F+QR YDQVVHDV 
Sbjct: 351 GTGLDVMAARFPARVFDVGIAEQHAVTFAAGMAASGLKPFCAIYSTFLQRGYDQVVHDVA 410

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRFA+DRAGLVGADG TH G+FD+ +++ LP   VMA +DEAEL HMVATAAA D
Sbjct: 411 LQGLPVRFAIDRAGLVGADGATHAGAFDIGYLSSLPGFTVMAAADEAELKHMVATAAAHD 470

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG+G+GVE+P   +G  L++GKGR+L EG  VA+L YG  +  C+ A  LL
Sbjct: 471 AGPIAFRYPRGSGMGVEIP--ERGQVLKIGKGRVLREGTDVAILSYGAHLAECIEAVDLL 528

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E  GL +T+ADARF KPLD  L+  LA+ H  LITVE+G+ GGFGS V+  LA++G  D 
Sbjct: 529 EREGLSVTLADARFAKPLDTELVMQLAEKHRALITVEQGAEGGFGSIVMHALAREGGFDR 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLT 697
            +  R + LPDR+ID  SPAD  A AG+T
Sbjct: 589 GLAMRNVCLPDRFIDQASPADMYADAGMT 617


>gi|386350703|ref|YP_006048951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
 gi|346719139|gb|AEO49154.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
          Length = 622

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/617 (59%), Positives = 447/617 (72%), Gaps = 12/617 (1%)

Query: 93  ELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHK 152
           +L+QLA E+RA++I  VS TGGHLGS LGV+ELTVALH+VF+ P DRI+WDVGHQ YPHK
Sbjct: 3   QLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVFDTPDDRIIWDVGHQCYPHK 62

Query: 153 ILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNV 212
           ILTGRRD++ T+RQ  GLSGFT R ES YD FG GHSSTSISAGLGMA+G  L G   +V
Sbjct: 63  ILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDARDV 122

Query: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALS 272
           VAVIGDG+M+AG AYEAMNNAG   S +IVILNDN  +S+         PPVGA+S+ LS
Sbjct: 123 VAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDN-DMSIA--------PPVGAMSAYLS 173

Query: 273 RLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPV 332
           RL S++    +R +AK +  ++   +   A + +EYARGM++G G TLFEE+G YY+GP+
Sbjct: 174 RLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGG-TLFEEMGFYYVGPI 232

Query: 333 DGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF 392
           DGH +D LV +L  V+     GPVLIHVVT+KG+GY  AE A DKYHGV++F+  TG Q 
Sbjct: 233 DGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQE 292

Query: 393 KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQH 452
           K+  +  SYT  F + L+A A  D  +VA+ AAM GGTGL+     +P RCFDVGIAEQH
Sbjct: 293 KAKPQAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGIAEQH 352

Query: 453 AVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC 512
           AVTFAAGLACEGLKPF A+YSSF+QR YDQVVHDV LQKLPVRFA+DRAG VGADG TH 
Sbjct: 353 AVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHG 412

Query: 513 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG 572
           G FD+ F+ CLPN+VVM  +DEAEL  MV TAA  D  P   RYPRG G+GVE+P   + 
Sbjct: 413 GVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ- 471

Query: 573 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 632
            PL +GKGRI+ EG+ VALL  GT +QSCL A  +L + GL  TVADARF KP D  L+ 
Sbjct: 472 -PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVA 530

Query: 633 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 692
            LA  HEVLI VEEG+IGGF SHV  +LA  GLLDG +K R L +PDR+ +H +P  Q A
Sbjct: 531 DLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCA 590

Query: 693 QAGLTPSHIAATVFNIL 709
           +AG+    I   V + L
Sbjct: 591 KAGIDAQAITTAVLDAL 607


>gi|162147644|ref|YP_001602105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542273|ref|YP_002274502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786221|emb|CAP55803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529950|gb|ACI49887.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 667

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/653 (56%), Positives = 470/653 (71%), Gaps = 31/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD + YP  ++NLS+ +LKQLA+ELRA+ +  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 21  PLLDRVAYPEDLRNLSVEQLKQLAEELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 80

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R ESEYD FG  HSSTSIS
Sbjct: 81  TPADRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSIS 140

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+       R+ NVVAVIGDG+++AG AYEAMNNA   G     +IV+LN
Sbjct: 141 AGLGMAVAHHLRAEHDPAYRERNVVAVIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLN 200

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LR++A  V +++   +   A K 
Sbjct: 201 DN-EMSI--------APPVGAMSNYLSRLMSSRQFLGLRDLAGKVARRLPERLERTAKKA 251

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMI+G   TLFEELG YY+GPVDGH+++ LV IL  +++    GP+L+H++TEKG
Sbjct: 252 DEYARGMITGG--TLFEELGFYYVGPVDGHDLNQLVPILRNLRDADDKGPILLHILTEKG 309

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH VAKF+  TG+Q K+     SYT+ F+  L+  A+ D  +VA+ AA
Sbjct: 310 RGYRPAESAGDKYHAVAKFNVVTGEQKKAPPGPPSYTSVFSRELVRRAKQDDTIVAVTAA 369

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F R  P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 370 MPSGTGLDAFARACPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 429

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPSDE EL HM ATA 
Sbjct: 430 DVVLQNLPVRFAIDRAGLVGADGATHAGAFDINYLGCLPGMTIMAPSDELELLHMTATAC 489

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D  P   RYPRGNG+G+ LP    G  LE+G+GRI+ E  R        +A+L  GT 
Sbjct: 490 AFDAGPIALRYPRGNGLGLALP--EAGEILEIGRGRIIREMGRQSGRETGGIAILSLGTR 547

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +   L A+ +L + GL  TVADARF KPLD ALI +LA++H VL+T+E+G+ GGFG++V+
Sbjct: 548 LAEVLKAADMLAAQGLAPTVADARFAKPLDTALIENLARNHAVLLTIEDGAEGGFGAYVM 607

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             LA+ GLLD T+++RP+ LPDR+IDH +   Q  QAGL    IAA     LG
Sbjct: 608 HHLARTGLLD-TIRFRPMTLPDRFIDHNTQDAQYHQAGLDAPAIAACAMQALG 659


>gi|400756076|ref|YP_006564444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
           2.10]
 gi|398655229|gb|AFO89199.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
           gallaeciensis 2.10]
          Length = 642

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/648 (56%), Positives = 459/648 (70%), Gaps = 22/648 (3%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD I  P  +K+LS  +L Q+A ELR + I  VS TGGHLG+ LGV+ELT A
Sbjct: 2   SDRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDV HQ YPHKILT RRD++ T+R  DGLSGFTKRSES +D FG  H
Sbjct: 62  LHAVFDTPRDKIIWDVSHQCYPHKILTSRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P +EL+ VAKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE LG  Y+GP+DGH++D L+ +L  VK  + TGP+LIHV+T+K
Sbjct: 233 AKDMLKGM--AVGGTLFESLGFSYLGPIDGHDMDQLLPVLRTVK-ARATGPILIHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A DK H  AKFD  TG+Q K+ +   SYT+ F + L+  A  D  + A+ A
Sbjct: 290 GKGYAPAERARDKGHATAKFDMVTGEQKKAPSNAPSYTSVFGKELVRLAAEDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+L   R+P+RCFDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLSLMAERYPSRCFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ +MA LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELAHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCL 602
           AA DD P  FRYPRG G GV++P     +P  LE+GKGR++  G+RVALL +GT +    
Sbjct: 470 AAYDDGPIAFRYPRGEGEGVDMPE----VPEVLEIGKGRMIQNGKRVALLSFGTRLGEVR 525

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A+  L + G+  T+ADARF KPLD  LI +LA SH+ LIT+EEG++GGFGSHV Q LA+
Sbjct: 526 KAAEALTAKGITPTIADARFAKPLDRDLILNLAASHDALITIEEGAVGGFGSHVAQLLAE 585

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +G+ D  +K+R +VLPD +ID  SPAD    A +    I A V  +LG
Sbjct: 586 EGVFDSGLKYRSMVLPDTFIDQASPADMYTVAAMNAPQIEAKVLEVLG 633


>gi|347759880|ref|YP_004867441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347578850|dbj|BAK83071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 663

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/659 (56%), Positives = 474/659 (71%), Gaps = 33/659 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLADELRA+ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 17  PQLDRVRAPHDMRNLSVEQLKQLADELRAETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPAYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 197 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 247

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 248 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 305

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 306 HGYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAA 365

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+H
Sbjct: 366 MPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMH 425

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH GSFD+ ++ CLP + +MAPS E EL HM ATA 
Sbjct: 426 DVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATAI 485

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ LP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 486 AFDEGPIGLRYPRGAGLGLALPAA--GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPR 543

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           ++  L A+ +L ++GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGF S V+
Sbjct: 544 LEHALKAADMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVM 603

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG--QTRE 714
             LA+ GLLD  V++RP+ LPDR+IDH +   Q  +AGL  + I  T  + LG  Q+R+
Sbjct: 604 THLAKTGLLD-RVRFRPMTLPDRFIDHNTQDAQYIEAGLDAAAIVDTALSALGLPQSRQ 661


>gi|126736182|ref|ZP_01751925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
 gi|126714348|gb|EBA11216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
          Length = 637

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/642 (56%), Positives = 461/642 (71%), Gaps = 14/642 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLD +N P  MK +S  EL+QLADELRA+ I  VS TGGHLG+ LGV+E+TVA
Sbjct: 2   SDQPHTPLLDRVNTPDDMKGMSDAELRQLADELRAETIAAVSVTGGHLGAGLGVVEMTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+APKD+I+WDV HQ YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDAPKDKIIWDVSHQCYPHKILTGRRDRIRTLRTEGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV RDL     + +A+IGDGAM+AG AYEAMNNAG+L   +IVILNDN 
Sbjct: 122 SSTSISAALGFAVARDLGAGGGDAIAIIGDGAMSAGMAYEAMNNAGHLGKRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PP GA+SS LSRL +  P +E +  AKG    +  P  E A +  + 
Sbjct: 181 EMSIA--------PPTGAMSSYLSRLYAGEPFQEFKAAAKGAVSLLPEPFREGAKRAKDM 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + M  G   TLFEELG  Y+GP+DGH+++ L+++L  VK+ +  GP+LIH +T+KG+GY
Sbjct: 233 LKHMTVGG--TLFEELGFSYLGPIDGHDMEQLLSVLRTVKD-RADGPILIHAITKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE+A+DK H  AKFD  TG+Q K+ +   SYT+ F+E+L   A  D  + A+ AAM  
Sbjct: 290 APAERASDKGHATAKFDVITGEQKKAPSNAPSYTSVFSESLCKLAADDPKICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL  F+ R+ +RCFDVGIAEQHAVTF+AGLA  G++PFCA+YS+F+QR YDQVVHDV 
Sbjct: 350 GTGLTKFMERYTSRCFDVGIAEQHAVTFSAGLAAGGMRPFCALYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV +++ LP  VVMA +DEAEL  MV TAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVGYLSNLPGFVVMAAADEAELVRMVTTAAAHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P   +   LE+GKGR++ EG +VA+L +GT +Q  ++A   L
Sbjct: 470 EGPIAFRFPRGEGVGVEMPETPE--LLEIGKGRMIREGAQVAILSFGTRLQEVMSACEAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G++ TVADARF KPLD  LI  LA  H+ LITVEEG++GGFGSHV Q LA +G+ D 
Sbjct: 528 EAKGIKPTVADARFAKPLDRELILQLAADHDALITVEEGAVGGFGSHVAQLLADEGVFDH 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +K+R +VLPD +ID  SP      AG+   HI A V  +LG
Sbjct: 588 GLKYRSMVLPDTFIDQASPKVMYDVAGMNAEHIEAKVLEVLG 629


>gi|330994689|ref|ZP_08318612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
 gi|329758330|gb|EGG74851.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
          Length = 663

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/659 (56%), Positives = 474/659 (71%), Gaps = 33/659 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  ++NLS+ +L+QLADELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 17  PQLDRVRAPHDLRNLSVEQLRQLADELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+SS LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 197 DN-EMSI--------APPVGAMSSYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 247

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 248 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 305

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 306 HGYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAA 365

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+H
Sbjct: 366 MPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMH 425

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH GSFD+ ++ CLP + +MAPS E EL HM ATA 
Sbjct: 426 DVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATAI 485

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ LP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 486 AFDEGPIGLRYPRGAGLGLALPAA--GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPR 543

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           ++  L A+ +L ++GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGF S V+
Sbjct: 544 LEHALKAADMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVM 603

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG--QTRE 714
             LA+ GLLD  V++RP+ LPDR+IDH +   Q  +AGL  + I  T  + LG  Q+R+
Sbjct: 604 THLARTGLLD-RVRFRPMTLPDRFIDHNTQDAQYIEAGLDAASIVKTALSALGLPQSRQ 661


>gi|397675987|ref|YP_006517525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
 gi|395396676|gb|AFN56003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
          Length = 649

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/648 (56%), Positives = 454/648 (70%), Gaps = 14/648 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 295 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV T A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDIAFMVNLPNMVVMAPSDEGELANMVHTMAHYDQGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGVGVSL-EGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            L LPDR+        Q A+AGL    I A V + L +  + +E++  
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRNSKPVEVVEM 640


>gi|386348075|ref|YP_006046323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
 gi|346716511|gb|AEO46526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
          Length = 622

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/617 (59%), Positives = 446/617 (72%), Gaps = 12/617 (1%)

Query: 93  ELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHK 152
           +L+QLA E+RA++I  VS TGGHLGS LGV+ELTVALH+VF+ P DRI+WDVGHQ YPHK
Sbjct: 3   QLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVFDTPDDRIIWDVGHQCYPHK 62

Query: 153 ILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNV 212
           ILTGRRD++ T+RQ  GLSGFT R ES YD FG GHSSTSISAGLGMA+G  L G   +V
Sbjct: 63  ILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDARDV 122

Query: 213 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALS 272
           VAVIGDG+M+AG AYEAMNNAG   S +IVILNDN  +S+         PPVGA+S+ LS
Sbjct: 123 VAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDN-DMSIA--------PPVGAMSAYLS 173

Query: 273 RLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPV 332
           RL S++    +R +AK +  ++   +   A + +EYARGM++G G TLFEELG YY+GP+
Sbjct: 174 RLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGG-TLFEELGFYYVGPI 232

Query: 333 DGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF 392
           DGH +D LV +L  V+     GPVLIHVVT+KG+GY  AE A DKYHGV++F+  TG Q 
Sbjct: 233 DGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQE 292

Query: 393 KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQH 452
           K+  +  SYT  F + L+A A  D  +V + AAM GGTGL+     +P RCFDVGIAEQH
Sbjct: 293 KAKPQAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQH 352

Query: 453 AVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC 512
           AVTFAAGLACEGLKPF A+YSSF+QR YDQVVHDV LQKLPVRFA+DRAG VGADG TH 
Sbjct: 353 AVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHG 412

Query: 513 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG 572
           G FD+ F+ CLPN+VVM  +DEAEL  MV TAA  D  P   RYPRG G+GVE+P   + 
Sbjct: 413 GVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ- 471

Query: 573 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 632
            PL +GKGRI+ EG+ VALL  GT +QSCL A  +L + GL  TVADARF KP D  L+ 
Sbjct: 472 -PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVA 530

Query: 633 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 692
            LA  HEVLI VEEG+IGGFG+HV  +L   GLLDG +K R L +PDR+ +H +P  Q A
Sbjct: 531 DLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCA 590

Query: 693 QAGLTPSHIAATVFNIL 709
           +AG+    I   V + L
Sbjct: 591 KAGIDAQAITTAVLDAL 607


>gi|94496312|ref|ZP_01302889.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
 gi|94424058|gb|EAT09082.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
          Length = 639

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/641 (57%), Positives = 456/641 (71%), Gaps = 14/641 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD + +P  ++ L   +L+QLADELRA+ I  V  TGGHLGS LGV+ELT A
Sbjct: 2   TDRPETPLLDQVVWPADLRKLQPEQLRQLADELRAETIAAVGVTGGHLGSGLGVVELTAA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFT+R+ES+YD FG  H
Sbjct: 62  IHYVFDTPDDKLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRAESDYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+   ++ +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN 
Sbjct: 122 SSTSISAALGFAIANKMQDKPGKAIAVIGDGAMSAGMAYEAMNNARDAGNRLVVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+RL S+R    LR++A+ + +++  P+H  A K DE+
Sbjct: 181 DMSIA--------PPVGGLSAYLARLVSSREFLGLRDLARKLARKLPRPLHNAARKTDEF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM    G TLFEELG YY+GP+DGHN+D L+ +LE V++    GP L+HVVT+KG+GY
Sbjct: 233 ARGM--AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDA-AQGPCLVHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEA+ D  V AI AAM  
Sbjct: 290 APAEAAADKYHGVQKFDVITGTQDKAPPGPPSYTNVFAKALIAEAQRDPAVCAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGLDKFQAAFPDRIFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMA +DEAEL HMV T A  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNMVVMAAADEAELVHMVRTCAIHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRGNG G+ LP   +   LE+GKGRI+ EG +VA+L  GT ++  + A+  L
Sbjct: 470 SGPIAVRYPRGNGTGIPLPEQPQA--LEIGKGRIVREGRQVAILSLGTRLEEAMKAADAL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD ALIR L  +H+V +T+EEG++GG G+HV+   +  GL+D 
Sbjct: 528 EAKGLSTTVADLRFAKPLDEALIRKLLTTHDVAVTIEEGAVGGLGAHVLTLASDLGLIDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +K R L LPD + D   P  Q A A L    I  TV   L
Sbjct: 588 GLKLRTLRLPDLFQDQDKPEKQYAMARLDADGIIDTVLTAL 628


>gi|347760612|ref|YP_004868173.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347579582|dbj|BAK83803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 671

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/653 (56%), Positives = 469/653 (71%), Gaps = 31/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLADELRA+ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 15  PQLDRVRAPHDMRNLSVEQLKQLADELRAETIDAVSTTGGHLGASLGVVELTVALHAVFD 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 75  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 134

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPAYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 194

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 195 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 245

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 246 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 303

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 304 HGYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAA 363

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+H
Sbjct: 364 MPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMH 423

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH GSFD+ ++ CLP + +MAPS E EL HM ATA 
Sbjct: 424 DVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATAI 483

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ LP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 484 AFDEGPIGLRYPRGAGLGLALPAA--GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPR 541

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           ++  L A+ +L ++GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGF S V+
Sbjct: 542 LEHALKAADMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVM 601

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             LA+ GLLD  V++RP+ LPDR+IDH +   Q  +AGL  + I  T    LG
Sbjct: 602 THLAKTGLLD-RVRFRPMTLPDRFIDHNTQDAQYIEAGLDAAAITNTALEALG 653


>gi|209543457|ref|YP_002275686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531134|gb|ACI51071.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 704

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/653 (56%), Positives = 470/653 (71%), Gaps = 31/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD + YP  ++NLS+ +LKQLA+ELRA+ +  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 48  PLLDRVAYPEDLRNLSVEQLKQLAEELRAETVDAVSTTGGHLGASLGVVELTVALHAVFD 107

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+R ESEYD FG  HSSTSIS
Sbjct: 108 TPADRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSIS 167

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+       R+ NVVAVIGDG+++AG AYEAMNNA   G     +IV+LN
Sbjct: 168 AGLGMAVAHHLRAEHDPAYRERNVVAVIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLN 227

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LR++A  V +++   +   A K 
Sbjct: 228 DN-EMSI--------APPVGAMSNYLSRLMSSRQFLGLRDLAGKVARRLPERLERTAKKA 278

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARGMI+G   TLFEELG YY+GPVDGH+++ LV IL  +++    GP+L+H++TEKG
Sbjct: 279 DEYARGMITGG--TLFEELGFYYVGPVDGHDLNQLVPILRNLRDADDKGPILLHILTEKG 336

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RGY  AE A DKYH VAKF+  TG+Q K+     SYT+ F+  L+  A+ D  +VA+ AA
Sbjct: 337 RGYRPAESAGDKYHAVAKFNVVTGEQKKAPPGPPSYTSVFSRELVRRAKQDDTLVAVTAA 396

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F R  P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 397 MPSGTGLDAFARACPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 456

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPSDE EL HM ATA 
Sbjct: 457 DVVLQNLPVRFAIDRAGLVGADGATHAGAFDINYLGCLPGMTIMAPSDELELLHMTATAC 516

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D  P   RYPRGNG+G+ LP    G  LE+G+GRI+ E  R        +A+L  GT 
Sbjct: 517 AFDAGPIALRYPRGNGLGLALP--EAGEILEIGRGRIIREMGRQSGRETGGIAILSLGTR 574

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +   L A+ +L + GL  TVADARF KPLD ALI +LA++H VL+T+E+G+ GGFG++V+
Sbjct: 575 LAEVLKAADMLAAQGLAPTVADARFAKPLDTALIENLARNHAVLLTIEDGAEGGFGAYVM 634

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             LA+ GLLD T+++RP+ LPDR+IDH +   Q  QAGL    IAA     LG
Sbjct: 635 HHLARTGLLD-TIRFRPMTLPDRFIDHNTQDAQYHQAGLDAPAIAACAMQALG 686


>gi|167647276|ref|YP_001684939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. K31]
 gi|254782067|sp|B0T3X7.1|DXS_CAUSK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|167349706|gb|ABZ72441.1| deoxyxylulose-5-phosphate synthase [Caulobacter sp. K31]
          Length = 638

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/637 (57%), Positives = 459/637 (72%), Gaps = 14/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI+ P   +  S+ ELKQLA E+RA+ I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 5   TPLLDTISSPADTRGFSVAELKQLASEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
             PKD ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  H++TSI
Sbjct: 65  ETPKDIVIWDVGHQAYPHKILTGRRDRIKTLRQGGGLSGFTKRAESVYDPFGAAHAATSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG    RD KG  N+V+AVIGDG+M+AG AYEAMN A      +IVILNDN  +S+ 
Sbjct: 125 SAALGFCAARDAKGENNSVIAVIGDGSMSAGMAYEAMNAAVDTTKRLIVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG +S+ L+ L S    R++R++ K V +++  P+ + A K +EYARGM+
Sbjct: 184 --------PPVGGMSAYLANLVSGGAYRKVRKLGKTVVEKLPTPIRDAARKAEEYARGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T FEELG +Y+GP+DGH++D LV++L  VK+     PVL+HVVT+KG+GY  AE 
Sbjct: 236 TGG--TFFEELGFHYVGPIDGHDMDALVSVLNNVKHFDEK-PVLVHVVTQKGKGYAPAEG 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADK H V KFD  TG+Q K++A   SYT  FA+ LI  A VD  ++AI AAM  GTGL+
Sbjct: 293 AADKLHAVVKFDVVTGQQHKAAAGPPSYTKVFAQELIKHAAVDDKIMAITAAMPSGTGLD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + +P R FDVGIAEQHAVTFAAGLA +G+KPF AIYS+F+QR YDQVVHDV +Q+LP
Sbjct: 353 LFGKAYPERTFDVGIAEQHAVTFAAGLAADGMKPFVAIYSTFLQRGYDQVVHDVAIQRLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFAMDRAGLVGADGPTH G+FD+ FM  LP MV+MA +DE EL HMV+TA AIDDRPS 
Sbjct: 413 VRFAMDRAGLVGADGPTHAGTFDLGFMGALPGMVLMAAADEVELAHMVSTAVAIDDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+G+ +P  +   PLE+GKGRI+ EG  VA++  GT +  CL A+ LL + GL
Sbjct: 473 FRYPRGEGLGLTIP--DLAAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  ++  LA+ HE +ITVEEG++GGFG+ V+Q LA  G LD  +K R
Sbjct: 531 SATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LVLPD + D   P    AQAGL    I     + LG
Sbjct: 591 TLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627


>gi|163745284|ref|ZP_02152644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
           HEL-45]
 gi|161382102|gb|EDQ06511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
           HEL-45]
          Length = 642

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/641 (56%), Positives = 459/641 (71%), Gaps = 18/641 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD +  P  +K+LS  +L Q+A ELR + I  VS+TGGHLG+ LGV+ELTVALH VF
Sbjct: 7   TPLLDQVTRPADLKHLSDAQLTQVARELRTETISAVSETGGHLGAGLGVVELTVALHAVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+D+I+WDV HQ YPHKILT RRD++ ++R  DGLSGFTKRSES YD FG  HSSTSI
Sbjct: 67  DTPRDKIIWDVSHQCYPHKILTERRDRIRSLRMKDGLSGFTKRSESPYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           SA LG AVGRDL G       + +AVIGDGAM+AG AYEA+NNAG L   +IVILNDN +
Sbjct: 127 SAALGFAVGRDLGGVIPEGLGDAIAVIGDGAMSAGMAYEALNNAGDLKKRLIVILNDN-E 185

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PPVGA+SS LSRL +  P ++ +  AKG    +  P  E A +  +  
Sbjct: 186 MSIA--------PPVGAMSSYLSRLYAEAPFQDFKAAAKGAVSLLPEPFREGAKRAKDML 237

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GM    G TLFE LG  Y+GP++GH++D L+ +L  V+  + TGP+LIH+ T+KG+GY 
Sbjct: 238 KGM--AVGGTLFENLGFSYLGPINGHDMDQLLPVLRTVQQ-RATGPILIHIQTQKGKGYG 294

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE A D+ H  AKF+  TG+Q KS +   SYT  FA++L+ EA  D  + A+ AAM  G
Sbjct: 295 PAEAARDRGHATAKFNVVTGEQKKSPSNAPSYTRVFADSLLTEAAEDDKICAVTAAMPDG 354

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL+LF  R+P+RCFDVGIAEQH VTF AGLA  G+KPFCA+YS+F+QR YDQVVHDV +
Sbjct: 355 TGLDLFAERYPSRCFDVGIAEQHGVTFCAGLAAAGMKPFCAMYSTFLQRGYDQVVHDVAI 414

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q+LPVRFA+DRAGLVGADGPTH G+FDV F+A LP  VVMA +DEAEL HMVATAAA D+
Sbjct: 415 QRLPVRFAIDRAGLVGADGPTHAGAFDVAFLANLPGFVVMAAADEAELRHMVATAAAHDE 474

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G GVE+P   +G PLE+GKGRI+ EG +VALL +GT ++    A+  L 
Sbjct: 475 GPIAFRYPRGEGRGVEMP--ERGTPLEIGKGRIIREGSKVALLSFGTRLEEVEKAAEALS 532

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G+  T+ADARF KPLD  +I  LA+ HE LIT+EEG++GGFGSHV Q LA + + D  
Sbjct: 533 AKGITPTIADARFAKPLDRDMILKLAEDHEALITIEEGAVGGFGSHVAQLLADEAVFDKG 592

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +K+R +VLPD +ID  +PAD  A AG+    I A V ++LG
Sbjct: 593 LKFRSMVLPDIFIDQANPADMYAVAGMNAEQITAKVLDVLG 633


>gi|397677362|ref|YP_006518900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
 gi|395398051|gb|AFN57378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
          Length = 650

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/650 (56%), Positives = 454/650 (69%), Gaps = 14/650 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 295 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV T A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDIAFMVNLPNMVVMAPSDEGELANMVHTMAHYDQGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGVGVSL-EGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFKS 723
            L LPDR+        Q A+AGL    I A V   L +  + +E++   +
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRNSKPVEVVELTT 642


>gi|84515019|ref|ZP_01002382.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
 gi|84511178|gb|EAQ07632.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
          Length = 644

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/639 (56%), Positives = 465/639 (72%), Gaps = 13/639 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD+I  P  ++ +++  L  LAD+LRA+VI  VS+TGGHLGSSLGV+ELTVA
Sbjct: 2   TNRPSTPFLDSIAGPADLRRMNMTALANLADDLRAEVISAVSETGGHLGSSLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P+D++++DVGHQ YPHK+LTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  IHAVFDTPRDKLIFDVGHQCYPHKVLTGRRDRIRTLRQEGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG  VGRDL     + +AVIGDG+++AG AYEAMNNAG     + VILNDN 
Sbjct: 122 SSTSISAALGFTVGRDLGMPTGDAIAVIGDGSISAGMAYEAMNNAGSEGRRLFVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGA+S  LS L ++ PL +L ++A+G    + GP+ + A +  + 
Sbjct: 181 EMSIA--------PPVGAMSKYLSGLYAS-PLGDLHKMAEGFESVLPGPIRDHARRARQL 231

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM SG+  TLFE LG  YIGP+DGH++  L+ +L   K T+ TGPVLIHV T+KG+GY
Sbjct: 232 VTGMQSGNTGTLFESLGFSYIGPIDGHDMSQLLPVLRAAK-TRATGPVLIHVCTKKGKGY 290

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE++ADKYHGVAKF+ A+G+Q KS     SYT  F  AL  EA+ D  +VA+ AAM  
Sbjct: 291 APAEQSADKYHGVAKFNVASGEQAKSRPNAPSYTKIFGTALTVEAQHDPRIVAVTAAMPN 350

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++  +RF +R FDVG+AEQH VTFAAG+A  GLKPFCAIYS+F+QR YDQ+VHDV 
Sbjct: 351 GTGVDIMGQRFGSRVFDVGMAEQHGVTFAAGMAASGLKPFCAIYSTFLQRGYDQIVHDVA 410

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRFA+DRAGLVGADGPTH GSFD+ ++A LPNMVVMA  DE EL HMV TAAA D
Sbjct: 411 LQNLPVRFAIDRAGLVGADGPTHAGSFDIGYLAALPNMVVMAAGDELELMHMVRTAAAYD 470

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG G+G++LP   +G  +E+GKGRI+ +G  VA+L +G  +  C  A+  L
Sbjct: 471 EGPIAFRYPRGEGVGLDLP--ERGEIIEIGKGRIVQQGSDVAILSFGAHLDECRKAARAL 528

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G+ +T+ADARF KPLD ALIR L + H+ L+TVE+G+ GGFG+ V+  LA DGLLDG
Sbjct: 529 ETQGVSVTIADARFAKPLDRALIRQLLRHHKALVTVEQGAQGGFGAMVLHDLANDGLLDG 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
             + R + LPDRYIDH +P    A+AGLT   IAAT   
Sbjct: 589 RCQVRTMTLPDRYIDHAAPDVMYAEAGLTAVDIAATAMQ 627


>gi|347757576|ref|YP_004865138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
           ARL-13]
 gi|347590094|gb|AEP09136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
           ARL-13]
          Length = 629

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/626 (58%), Positives = 451/626 (72%), Gaps = 13/626 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ +  P  +++ +  +LKQLA+E+RA++I  VS TGGHLG+ LGV+ELTVA+H VFN 
Sbjct: 9   LLNNVVVPDDIRDFTDDQLKQLAEEVRAEMIDAVSHTGGHLGAGLGVVELTVAIHAVFNT 68

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSISA
Sbjct: 69  PDDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISA 128

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV RD  G+ N+V+ VIGDG+MTAG AYEAMNNAG   S +IVILNDN  +S+   
Sbjct: 129 GLGMAVARDQLGKDNHVICVIGDGSMTAGMAYEAMNNAGDAKSRLIVILNDN-DMSIA-- 185

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGALS  L+RL S++   + RE  K VT+ +  P+     + +E AR  + G
Sbjct: 186 ------PPVGALSKHLTRLVSSKRYMQARETGKKVTEILPPPLRHAVKRAEESARTAM-G 238

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +GS LFEE+G YYIGPVDGHN+D L+ I+  +++    GPVLIH +T+KG+GY  AE +A
Sbjct: 239 TGS-LFEEMGFYYIGPVDGHNLDQLLPIMRNLRDGAHEGPVLIHAITKKGKGYAPAESSA 297

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DK HGV KFD  TG Q KS     +YT  FA++LI EA  D  +VAI  AM  GTGL+LF
Sbjct: 298 DKMHGVVKFDVVTGAQHKSKPSAPAYTKVFAQSLIEEARHDSRIVAITGAMPSGTGLDLF 357

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            R FP R FDVGIAEQHAVTFAAG+A EGLKPFCAIYS+F+QRAYDQVVHDV +Q LPVR
Sbjct: 358 EREFPDRMFDVGIAEQHAVTFAAGMATEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVR 417

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FAMDRAGLVGADG TH G+FDV +M CLPNMV+MA  DE EL HMVAT AA D  P   R
Sbjct: 418 FAMDRAGLVGADGSTHAGAFDVAYMGCLPNMVLMAAGDEVELMHMVATMAAYDAGPIGLR 477

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+G++LP   +G  LE+GKGR++ EG  VA+L YGT +   L A+  L   G+  
Sbjct: 478 YPRGEGMGIDLPA--RGFVLEIGKGRVVREGNDVAILSYGTRLGEALKAADALAERGISA 535

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KPLD ALI  LA  H  LIT+EEGSIGGFGS+ ++++   GLLDG  + + +
Sbjct: 536 TVADARFAKPLDTALITQLANHHSKLITIEEGSIGGFGSYTLEYMNDAGLLDGRCRVKTM 595

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHI 701
            LPD + D  +P  Q  +AGL    I
Sbjct: 596 HLPDLFQDQDTPDKQYDEAGLNAKQI 621


>gi|381202917|ref|ZP_09910026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           XLDN2-5]
          Length = 640

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/640 (57%), Positives = 454/640 (70%), Gaps = 18/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+N P  ++ L   +L QLADELRA+ I  V  TGGHLGS LGV+ELT A+HY
Sbjct: 4   PSTPLLDTVNIPADLRKLQPDQLHQLADELRAETIAAVGVTGGHLGSGLGVVELTTAIHY 63

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSST
Sbjct: 64  VFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHSST 123

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG AV   ++ +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 124 SISAALGFAVANKMQDKPGKGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDN-DMS 182

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L+RL S+R    LR++AK + +++  P+H+ A K DE+ARG
Sbjct: 183 IA--------PPVGGLSAYLARLVSSREFLGLRDMAKKLARKLPRPLHKAAKKTDEFARG 234

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M   +G TLFEELG YY+GP+DGHN++ L+ +LE V++    GP LIHVVT+KG+GY  A
Sbjct: 235 M--ATGGTLFEELGFYYVGPIDGHNLEHLIPVLENVRDA-AEGPCLIHVVTQKGKGYGPA 291

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEAE D  V AI AAM  GTG
Sbjct: 292 EAAADKYHGVQKFDVITGTQAKAPPGPPSYTNVFAQALIAEAERDPRVCAITAAMPSGTG 351

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q 
Sbjct: 352 LDKFELAFPDRIFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQN 411

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV T A  D  P
Sbjct: 412 LPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELTHMVHTCAVHDSGP 471

Query: 552 SCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
              RYPRGNG GV +P     +P  LE+GKGR++ EG +VA+L  GT ++  + A+  LE
Sbjct: 472 IAVRYPRGNGTGVAMPE----VPEALEIGKGRVVREGRQVAILSLGTRLEEAMKAADTLE 527

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + GL  +V D RF KPLD ALIR +  +HEV +T+EEGSIGG G+HV+   +  GL D  
Sbjct: 528 AKGLSASVVDLRFAKPLDEALIRRMLTTHEVAVTIEEGSIGGLGAHVLTLASDLGLTDNG 587

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           +K R + LPD + D   P  Q A A L    I  TV   L
Sbjct: 588 LKIRTMRLPDIFQDQDKPEQQYADARLDADAIVTTVLTAL 627


>gi|85375331|ref|YP_459393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter litoralis
           HTCC2594]
 gi|123099471|sp|Q2N6U5.1|DXS_ERYLH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|84788414|gb|ABC64596.1| 1-D-deoxyxylulose 5-phosphate synthase [Erythrobacter litoralis
           HTCC2594]
          Length = 640

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/649 (56%), Positives = 457/649 (70%), Gaps = 14/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLDT++YP  ++ L   +L+QL+DELRA++I  V  TGGHLGS LGV+ELT A
Sbjct: 2   SARPDTPLLDTVSYPEDLRKLEPGQLRQLSDELRAEMISAVGVTGGHLGSGLGVVELTAA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVFN P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  IHYVFNTPEDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLG AV   LKG     +AVIGDGAM+AG AYEAMNNA    + +IVILNDN 
Sbjct: 122 SSTSISAGLGFAVANKLKGEPGKAIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS  L+RL S+     LR +A  +T ++   +H    K +EY
Sbjct: 181 DMSIA--------PPVGGLSGYLARLMSSSEYLGLRSLASRMTAKVSRRVHTSLGKAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            +G+++G   TLFEELG YY+GP+DGHN+D L+ +LE V++ +  GP LIHV T KG+GY
Sbjct: 233 TKGLVTGG--TLFEELGFYYVGPIDGHNLDHLIPVLENVRDAEE-GPFLIHVRTVKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE +ADKYHGVAKFD  TG+Q KS+    +Y   F E L   A+ D  + AI AAM  
Sbjct: 290 APAENSADKYHGVAKFDVVTGEQKKSTGGPPAYQNVFGETLAKLADSDPRICAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F +  P R FDVGIAEQH VTFAAGLA +G++PF AIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGVDKFAKAHPDRAFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HM  TAA  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNFVVMAAADEAELVHMTYTAAEHD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P  FRYPRG GIG++LP   +   LE+GKGRI+  G +VALL  GT ++    A+  L
Sbjct: 470 SGPIAFRYPRGGGIGIDLPETPE--KLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADEL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  T+AD RF KPLD  LI  L K+HEV++T+EE SIGG G+HV+ + + +GL D 
Sbjct: 528 EAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDA 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            +K R + LPD +I+  +P  Q  +AGLT  HI  TV   L Q    +E
Sbjct: 588 GLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKALRQNSAGVE 636


>gi|56552130|ref|YP_162969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752342|ref|YP_003225235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|81354958|sp|Q5NN52.1|DXS1_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|56543704|gb|AAV89858.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258551705|gb|ACV74651.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 649

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/648 (56%), Positives = 454/648 (70%), Gaps = 14/648 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 295 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV + A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGVGVSL-EGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            L LPDR+        Q A+AGL    I A V + L +  + +E++  
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRNSKPVEVVEM 640


>gi|218197541|gb|EEC79968.1| hypothetical protein OsI_21592 [Oryza sativa Indica Group]
          Length = 611

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/609 (58%), Positives = 441/609 (72%), Gaps = 23/609 (3%)

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           V+EL +A+HYVFNAP D+ILWD G  TY HKILTGRR   HT++Q  GLSGFT R ESEY
Sbjct: 14  VVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEY 73

Query: 182 DCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           D FG GH   S+SAGLGMAV RDL GRKN +V VI +    AGQ YEAM +AG+LDS+M+
Sbjct: 74  DPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNMV 133

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           VILND++   LP A     +  + ALSSALS++QS++  R+ RE AKG++K  G  MHE 
Sbjct: 134 VILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHEF 192

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
           AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL+ +L+EV    +TGPVL+HV+
Sbjct: 193 AAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHVI 252

Query: 362 TEKGRG---------YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAE 412
           TE  +           P  E   D    + KF          +  +++Y   F E+LIAE
Sbjct: 253 TENEKDSGGEFNSEITPDEEGPPDSSQDILKF--------LENGLSRTYNDCFVESLIAE 304

Query: 413 AEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIY 472
           AE DK +V +H  MG    + LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I 
Sbjct: 305 AENDKRIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIP 364

Query: 473 SSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPS 532
           S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+PS
Sbjct: 365 STFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPS 424

Query: 533 DEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVGKGRILIEGERVA 590
           +E EL  MVATAA ++DRP CFRYP+G  +G    L  GN   PLE+GKG IL EG+ +A
Sbjct: 425 NEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGN---PLEIGKGEILAEGKEIA 481

Query: 591 LLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIG 650
            LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR L + H+ LITVEEG++G
Sbjct: 482 FLGYGEVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTVG 541

Query: 651 GFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           GFGSHV QF++ DGLLDG +KWRP+VLPDRYI+H S  +QL  AGLT  HIAAT   +LG
Sbjct: 542 GFGSHVSQFISLDGLLDGKIKWRPIVLPDRYIEHASLTEQLDMAGLTAHHIAATALTLLG 601

Query: 711 QTREALEIM 719
           + R+AL +M
Sbjct: 602 RHRDALLLM 610


>gi|384412441|ref|YP_005621806.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|118595489|sp|Q5NM38.2|DXS2_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|335932815|gb|AEH63355.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 650

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/650 (56%), Positives = 454/650 (69%), Gaps = 14/650 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 295 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV + A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGVGVSL-EGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFKS 723
            L LPDR+        Q A+AGL    I A V   L +  + +E++   +
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRNSKPVEVVELTT 642


>gi|56552494|ref|YP_163333.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56544068|gb|AAV90222.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 660

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/650 (56%), Positives = 454/650 (69%), Gaps = 14/650 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 17  TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 76

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 77  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 136

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 137 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 195

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 196 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 246

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 247 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 304

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 305 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 364

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 365 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 424

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV + A  D  P  
Sbjct: 425 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPIS 484

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 485 VRYPRGNGVGVSL-EGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 542

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 543 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 602

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFKS 723
            L LPDR+        Q A+AGL    I A V   L +  + +E++   +
Sbjct: 603 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRNSKPVEVVELTT 652


>gi|126462659|ref|YP_001043773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221639678|ref|YP_002525940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           KD131]
 gi|126104323|gb|ABN77001.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221160459|gb|ACM01439.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Rhodobacter sphaeroides
           KD131]
          Length = 648

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/645 (56%), Positives = 455/645 (70%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +  P  MK LS  EL++LADE+R++VI  V++TGGHLGSSLGV+ELTVA
Sbjct: 5   TPRPETPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VFN P D+++WDVGHQ YPHKILTGRR++M T+RQ  GLSGFTKRSES YD FG  H
Sbjct: 65  LHAVFNTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+GR+L     + +AVIGDG++TAG AYEA+N+AG+L+  + VILNDN 
Sbjct: 125 SSTSISAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGAL+  L  L S  P   LR  A G+   + GP+ + A +  + 
Sbjct: 184 DMSI--------APPVGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQL 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM  G   TLFEELG  Y+GP+DGH+++ L+  L   +  +TTGPVLIHVVT+KG+GY
Sbjct: 236 VTGMPGGG--TLFEELGFTYVGPIDGHDMEALLQTLRAAR-ARTTGPVLIHVVTKKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV KFDP TG+Q KS A   +YT  F   L  EA  D  +VAI AAM  
Sbjct: 293 APAENAPDKYHGVNKFDPVTGEQKKSVANAPNYTKVFGSTLTEEAARDPRIVAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++  +RFP R FDVGIAEQHAVTFAAGLA  G+KPFCAIYSSF+QR YDQ+ HDV 
Sbjct: 353 GTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADG TH G+FDV F+  LPNM VMA +DEAEL HM+ATA A D
Sbjct: 413 LQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTSLPNMTVMAAADEAELIHMIATAVAFD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P   +G  LE G+GR++ EG  VA+L +G  +   L A+ LL
Sbjct: 473 EGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G+ +TVADARF +PLD  LI  L + H  L+TVE+G++GGFG+HV+ +LA  G  DG
Sbjct: 531 EAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDG 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +  R + LPDR+I+  SP D  A AGL    IAAT    L + R
Sbjct: 591 GLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635


>gi|254476395|ref|ZP_05089781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
 gi|214030638|gb|EEB71473.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
          Length = 642

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/648 (56%), Positives = 455/648 (70%), Gaps = 22/648 (3%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD I  P  +K+LS  +L Q+A ELR + I  VS TGGHLG+ LGV+ELT A
Sbjct: 2   SDRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES +D FG  H
Sbjct: 62  LHAVFDTPRDKIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVIPEGNGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P +EL+ VAKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE LG  Y+GP+DGH++D L+ +L  VK  + TGP+LIHV+T+K
Sbjct: 233 AKDMLKGM--AVGGTLFESLGFSYLGPIDGHDMDQLLPVLRTVK-ARATGPILIHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A DK H  AKFD  TG+Q K+ +   SYT  F + L+  A  D  + A+ A
Sbjct: 290 GKGYAPAERARDKGHATAKFDMVTGEQKKAPSNAPSYTAVFGKELVRLAAEDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNL   R+P+R FDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ +MA LP MVVMA +DEAEL HM ATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELVHMTATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCL 602
           AA DD P  FRYPRG G GV++P     +P  LE+GKGR++  G+RVA+L +GT +    
Sbjct: 470 AAYDDGPIAFRYPRGEGEGVDMPE----VPEVLEIGKGRMIQNGKRVAILSFGTRLGEVK 525

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A+  L + G+  T+ADARF KPLD  +I  LA  HE LIT+EEG++GGFGSHV Q LA+
Sbjct: 526 KAAEALSAKGITPTIADARFAKPLDRDMILKLAADHEALITIEEGAVGGFGSHVAQLLAE 585

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +G+ D  +K+R +VLPD +ID  SPAD    A +    I A V  +LG
Sbjct: 586 EGVFDSGLKFRSMVLPDTFIDQASPADMYEIAAMNAPQIEAKVLEVLG 633


>gi|384411041|ref|YP_005620406.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|335931415|gb|AEH61955.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 649

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/648 (56%), Positives = 454/648 (70%), Gaps = 14/648 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 295 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV + A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGVGVSL-EGEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLVDDGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            L LPDR+        Q A+AGL    I A V + L +  + +E++  
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRNSKPVEVVEM 640


>gi|91762254|ref|ZP_01264219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718056|gb|EAS84706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 637

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/644 (53%), Positives = 465/644 (72%), Gaps = 14/644 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            L  IN+P  ++ LS  +L+++++E+R ++I  VS+TGGHLG+ LGV+ELTVALHYVF+ 
Sbjct: 6   FLKDINFPSDLRKLSENDLQEVSNEVRKEMIDAVSETGGHLGAGLGVVELTVALHYVFDT 65

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGR+ K+ T+RQ +GLSGFTKRSESEYD FG  HSSTSIS+
Sbjct: 66  PNDRLIWDVGHQTYPHKILTGRKSKIKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISS 125

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA    L  + +N++AVIGDGA++AG AYEAMNNAG   + MIVILNDN  +S+   
Sbjct: 126 ALGMAEANKLSNKSSNIIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDN-DMSIA-- 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGA+ + L++L + +    LRE  K +           A K +++ R  ++G
Sbjct: 183 ------KPVGAMRTYLAKLLTGKIYFSLRETFKLIVSAFSKRFSAKAGKAEDFLRSAVTG 236

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLF  LG YY+GP+DGH++  L+ IL+  +++K  GP++IH+ T+KG+GY YAEKA+
Sbjct: 237 G--TLFNSLGFYYVGPIDGHDLSTLIPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKAS 294

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           D YHGV+KF+  TG+Q KS     +YT  FA  L+  AE D  VV + AAM GGTG+++F
Sbjct: 295 DHYHGVSKFNVVTGEQVKSGTNLPAYTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIF 354

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            + FP R FDVGIAEQHAVTFAAGLA EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVR
Sbjct: 355 AKDFPKRMFDVGIAEQHAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVR 414

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DRAGLVGADG TH GSFD+T+++ LPN +VMAPSDEAEL  M+ T+ +I+++P   R
Sbjct: 415 FIIDRAGLVGADGSTHAGSFDITYLSTLPNFIVMAPSDEAELVKMINTSMSINNKPCAIR 474

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRGNGIGVELP  ++ I  E+GKGR++ EG++V +L  GT ++ C  A+A L++ G+  
Sbjct: 475 YPRGNGIGVELPSIDENI--EIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIES 532

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           T+ DARF KPLD  LI   A+ HEV+ITVEEGSIGGFGSHV   L++ G+ D  +K+R +
Sbjct: 533 TIVDARFAKPLDQELILKCAREHEVMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTM 592

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +LPD +I+  SP      AGL  S I+  + +IL  T+E+++++
Sbjct: 593 ILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL-FTKESIKVV 635


>gi|254462269|ref|ZP_05075685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678858|gb|EDZ43345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 642

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/646 (56%), Positives = 457/646 (70%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD +  P  +   S  EL ++A ELR++ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPNTPLLDRVQRPADLGQFSDAELTRVAQELRSETISAVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VFN PKD+I+WDVGHQ YPHKILT RR+++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 62  LHSVFNTPKDKIIWDVGHQCYPHKILTERRERIRTLRMKDGLSGFTKRSESVYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+++AG A+EAMNNAG+L   M VIL
Sbjct: 122 SSTSISAALGFAVARDLGGEAPGGLGDAIAVIGDGSISAGMAFEAMNNAGHLKKRMFVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P ++L+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSSYLSRLYAEEPFQDLKTAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM  G   TLFE+LG  Y+GP+DGH++D L+ +L  V+ T+ TGPVLIHV+T+K
Sbjct: 233 AKDMLKGMTVGG--TLFEQLGFSYLGPIDGHDMDQLLPVLRTVQ-TRATGPVLIHVITKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TG+Q KS +   SYT  FAE+L+ EA  D  + A+ A
Sbjct: 290 GKGYAPAEAARDKGHATAKFDVLTGEQKKSPSNAPSYTKVFAESLLKEAAADDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLN F  R+P+RCFDV IAEQH VTF+A LA  G+KPFC +YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNQFAERYPSRCFDVAIAEQHGVTFSAALAAGGMKPFCTMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FD  +++ LP   VMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAYLSNLPGFTVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
            A D+ P  FR+PRG G+GVE+P   KGIPLE+GKGRI+ EG+ VA+L +GT ++    A
Sbjct: 470 VAHDEGPIAFRFPRGEGVGVEIP--EKGIPLEIGKGRIIREGKGVAILSFGTRLKEVEDA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              L + G+  ++A+ARF KPLD  LI  LA+ HE LIT+EEG++GGFGSHV Q LA++G
Sbjct: 528 CDALAAKGITPSIANARFAKPLDRDLILQLAQDHESLITIEEGAVGGFGSHVAQLLAEEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SP D  A A L    I A V + LG
Sbjct: 588 VFDTGLKYRSMVLPDIFIDQSSPRDMYAVAKLNAEDIEAKVLDTLG 633


>gi|429209358|ref|ZP_19200596.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
 gi|428187823|gb|EKX56397.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
          Length = 648

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/645 (56%), Positives = 455/645 (70%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +  P  MK LS  EL++LADE+R++VI  V++TGGHLGSSLGV+ELTVA
Sbjct: 5   TPRPETPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VFN P D+++WDVGHQ YPHKILTGRR++M T+RQ  GLSGFTKRSES YD FG  H
Sbjct: 65  LHAVFNTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+GR+L     + +AVIGDG++TAG AYEA+N+AG+L+  + VILNDN 
Sbjct: 125 SSTSISAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGAL+  L  L S  P   LR  A G+   + GP+ + A +  + 
Sbjct: 184 DMSI--------APPVGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQL 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM  G   TLFEELG  Y+GP+DGH+++ L+  L   +  +TTGPVLIHVVT+KG+GY
Sbjct: 236 VTGMPGGG--TLFEELGFTYVGPIDGHDMEALLQTLRAAR-ARTTGPVLIHVVTKKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV KFDP TG+Q KS A   +YT  F   L  EA  D  +VAI AAM  
Sbjct: 293 APAENAPDKYHGVNKFDPVTGEQKKSVANAPNYTKVFGSTLTEEAARDPRIVAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++  +RFP R FDVGIAEQHAVTFAAGLA  G+KPFCAIYSSF+QR YDQ+ HDV 
Sbjct: 353 GTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADG TH G+FDV F+  LPNM VMA +DEAEL HM+ATA A D
Sbjct: 413 LQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTSLPNMTVMAAADEAELIHMIATAVAFD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P   +G  LE G+GR++ EG  VA+L +G  +   L A+ LL
Sbjct: 473 EGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G+ +TVADARF +PLD  LI  L + H  L+TVE+G++GGFG+HV+ +LA  G  DG
Sbjct: 531 EAEGVNVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDG 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +  R + LPDR+I+  SP D  A AGL    IAAT    L + R
Sbjct: 591 GLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635


>gi|260753843|ref|YP_003226736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553206|gb|ACV76152.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 650

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/650 (56%), Positives = 454/650 (69%), Gaps = 14/650 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I  P  ++ L    L+QLADELR + I  V  TGGHLGS LGVIELTVALHYVF
Sbjct: 7   TPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N PKD ++WDVGHQTYPHKILTGRRD++ T+RQ DGLSGFT+R+ESEYD FG  HSSTSI
Sbjct: 67  NTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   L    +  VA+IGDG+MTAG AYEAMNNA      +IVILNDN ++S+ 
Sbjct: 127 SAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALSS LSRL S+RP   LR++ +GV  ++   +   A K DEYARGM 
Sbjct: 186 --------PPVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEYARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +G T FEELG YY+GPVDGHN+D L+ +LE V++ K  GP+L+HVVT KG+GY  AE 
Sbjct: 237 -ATGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V + D  +GKQ K+     SYT+ F+E LI EA+ D  +V I AAM  GTGL+
Sbjct: 295 AKDKYHAVQRLDVVSGKQAKAPPGPPSYTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA  G KPFC +YS+F+QR YDQ+VHDV +Q LP
Sbjct: 355 RFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ FM  LPNMVVMAPSDE EL +MV + A  D  P  
Sbjct: 415 VRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPIS 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG+GV L  G K I L +GKGR++  G++VA+L  GT ++  L A+  L++ GL
Sbjct: 475 VRYPRGNGVGVSL-EGEKEI-LTIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+   + +GL+D  +K R
Sbjct: 533 STSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSFKS 723
            L LPDR+        Q A+AGL    + A V   L +  + +E++   +
Sbjct: 593 TLRLPDRFQPQDKQERQYAEAGLDADGMVAAVTAALQRNSKPVEVVELTT 642


>gi|77463823|ref|YP_353327.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
 gi|119368195|sp|Q3J1A8.1|DXS1_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|77388241|gb|ABA79426.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
          Length = 648

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/645 (56%), Positives = 455/645 (70%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +  P  MK LS  EL++LADE+R++VI  V++TGGHLGSSLGV+ELTVA
Sbjct: 5   TPRPETPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VFN P D+++WDVGHQ YPHKILTGRR++M T+RQ  GLSGFTKRSES YD FG  H
Sbjct: 65  LHAVFNTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+GR+L     + +AVIGDG++TAG AYEA+N+AG+L+  + VILNDN 
Sbjct: 125 SSTSISAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGAL+  L  L S  P   LR  A G+   + GP+ + A +  + 
Sbjct: 184 DMSI--------APPVGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQL 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM  G   TLFEELG  Y+GP+DGH+++ L+  L   +  +TTGPVLIHVVT+KG+GY
Sbjct: 236 VTGMPGGG--TLFEELGFTYVGPIDGHDMEALLQTLRAAR-ARTTGPVLIHVVTKKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV KFDP TG+Q KS A   +YT  F   L  EA  D  +VAI AAM  
Sbjct: 293 APAENAPDKYHGVNKFDPVTGEQKKSVANAPNYTKVFGSTLTEEAARDPRIVAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++  +RFP R FDVGIAEQHAVTFAAGLA  G+KPFCAIYSSF+QR YDQ+ HDV 
Sbjct: 353 GTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADG TH G+FDV F+  LPNM VMA +DEAEL HM+ATA A D
Sbjct: 413 LQNLPVRFVIDRAGLVGADGATHAGAFDVGFITSLPNMTVMAAADEAELIHMIATAVAFD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P   +G  LE G+GR++ EG  VA+L +G  +   L A+ LL
Sbjct: 473 EGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G+ +TVADARF +PLD  LI  L + H  L+TVE+G++GGFG+HV+ +LA  G  DG
Sbjct: 531 EAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDG 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +  R + LPDR+I+  SP D  A AGL    IAAT    L + R
Sbjct: 591 GLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635


>gi|332185973|ref|ZP_08387719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
 gi|332013788|gb|EGI55847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
          Length = 641

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/638 (58%), Positives = 451/638 (70%), Gaps = 14/638 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P  ++ L+  +L+QLADELR + I  V  TGGHLGS LGV+ELTVALHY
Sbjct: 5   PQTPLLDTVHTPDDLRRLAPEQLRQLADELRTETISAVGTTGGHLGSGLGVVELTVALHY 64

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSST
Sbjct: 65  VFNTPADRLVWDVGHQCYPHKILTGRRDRIRTIRQGGGLSGFTKRSESEYDPFGAAHSST 124

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG AV   L G     +AVIGDGAM+AG AYEAMNNA    + +IVILNDN  +S
Sbjct: 125 SISAALGFAVANKLAGTPGKGIAVIGDGAMSAGMAYEAMNNAEQAGNRLIVILNDN-DMS 183

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ LSR+ S+R    +R+V K + K+   P+ + A K DE+ARG
Sbjct: 184 IA--------PPVGGLSAYLSRIVSSREFLGVRDVFKKLAKRFPRPIQKAARKTDEFARG 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M  G   TLFEELG YY+GP+DGHN+D L+ +LE V++ +  GP+LIHVVT+KG+GY  A
Sbjct: 236 MTMGG--TLFEELGFYYVGPIDGHNLDHLIPVLENVRDAEE-GPILIHVVTKKGKGYAPA 292

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     +Y   F E L  EAE D  + AI AAM  GTG
Sbjct: 293 EAAADKYHGVQKFDVITGAQAKAPPGPPAYQNVFGETLSREAESDPRICAITAAMPSGTG 352

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F    P R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q 
Sbjct: 353 LDKFAAAHPDRFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQN 412

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMA +DEAEL HMV T    D  P
Sbjct: 413 LPVRFAIDRAGLVGADGATHAGSFDVTYLASLPNMVVMAAADEAELVHMVHTCVNHDSGP 472

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRGNG+GV LP   +   LE+GKGR++ EG++VA+L  GT +   L A+  LE+ 
Sbjct: 473 IAVRYPRGNGVGVALPETPE--LLEIGKGRLVREGKKVAILSLGTRLGEALRAADALEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  +VAD RF KPLD ALIR L  +HEV +T+EE +IGG G+HV+   + +GL+D  +K
Sbjct: 531 GLSTSVADLRFAKPLDEALIRRLLTTHEVAVTIEENAIGGLGAHVLTMASDEGLIDAGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + D   P  Q AQAGL    I  TV   L
Sbjct: 591 LRTMRLPDLFQDQDKPEVQYAQAGLDADAIVETVLKAL 628


>gi|99082760|ref|YP_614914.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
 gi|118595619|sp|Q1GCG4.1|DXS_SILST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|99039040|gb|ABF65652.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
          Length = 645

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/649 (56%), Positives = 453/649 (69%), Gaps = 18/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD I  P  +K LS  +L+Q+A ELR + I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPQTPLLDQIASPADLKRLSDAQLEQVAHELRQETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ PKD+++WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES +D FG  H
Sbjct: 62  LHSVFDTPKDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESAFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G       + +AVIGDGAM+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFSVARDLGGVTEEGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P  +L+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSSYLSRLYTEAPFHDLKAAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE LG  YIGP+DGH++D L+ +L  VK  +  GP+LIH VT+K
Sbjct: 233 AKDMLKGM--AMGGTLFESLGFSYIGPIDGHDMDQLLPVLRTVK-ARAAGPILIHAVTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TG+Q K+ +   SYT+ F + L   A  D  + A+ A
Sbjct: 290 GKGYRPAEVARDKGHATAKFDMVTGEQKKAPSNAPSYTSVFGKTLTDLAAQDSKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNL   R+P+R FDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ FMA LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELKHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D  P  FRYPRG G GVE+P   +   LE+GKGRI+ EG RVALL +GT +     A
Sbjct: 470 AAYDAGPIAFRYPRGEGEGVEMP--EQPEVLEIGKGRIIEEGSRVALLSFGTRLGEVRKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  TVADARF KPLD  +I SLA+ HE LIT+EEG++GGFGSHV Q L+++ 
Sbjct: 528 AEALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEA 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           + D  +K+R +VLPD +ID  SP D    A +   HI A V ++LG  R
Sbjct: 588 VFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVLGVAR 636


>gi|149185145|ref|ZP_01863462.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
 gi|148831256|gb|EDL49690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
          Length = 640

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/649 (55%), Positives = 459/649 (70%), Gaps = 14/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S+RP TPLLDT++ P  ++ L   +L+QL+DELR ++I  V  TGGHLGS LGV+ELT A
Sbjct: 2   SERPHTPLLDTVDTPADLRKLKQDQLRQLSDELRTEMIDAVGTTGGHLGSGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H
Sbjct: 62  IHYVFDTPTDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+   ++GR    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN 
Sbjct: 122 SSTSISAALGFAMANKMQGRPGRGIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+R  S+     LR +A  ++K++   +H    K +EY
Sbjct: 181 DMSIA--------PPVGGLSAYLARTVSSSEYLGLRSLASRLSKKLSRRVHSSLEKAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARGM++G   TLFEELG YY+GP+DGHN+D L+ +LE V++++  GPVLIHVVT+KG+GY
Sbjct: 233 ARGMVTGG--TLFEELGFYYVGPIDGHNLDHLIPVLENVRDSEQ-GPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE +ADKYHGVAKFD  TG+Q KSS    +Y   F E L   A  D  + AI AAM  
Sbjct: 290 APAENSADKYHGVAKFDVVTGEQKKSSGGPPAYQNVFGETLAKLANDDPRICAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F +  P + FDVGIAEQH VTFAAGLA EG++PF AIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGVDKFAQAHPDKAFDVGIAEQHGVTFAAGLAAEGMRPFAAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFD+T++A LPN VVMA +DEAEL HM  TAA  D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGCTHAGSFDITYLATLPNFVVMAAADEAELAHMTYTAAEYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P  FRYPRG G GVE+P   K    E+GKGRI+ EG +VA+L  G  ++    A+  L
Sbjct: 470 DGPIAFRYPRGAGTGVEIP--EKLEKFEIGKGRIMREGSKVAILSLGARLEEAKKAADQL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD ALI  + +SHEV++T+EEG++GG G+HV+ + + +GL DG
Sbjct: 528 EAKGLSTTVADMRFAKPLDTALIEQIMRSHEVVVTIEEGAVGGLGAHVLTYASDEGLTDG 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            +K R + LPD + D   P  Q  +AGL   HI  TV + L      +E
Sbjct: 588 GLKVRTMRLPDAFQDQDDPTKQYDEAGLNAPHIVDTVLSALRHNSAGVE 636


>gi|399994532|ref|YP_006574772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
           DSM 17395 = CIP 105210]
 gi|398659087|gb|AFO93053.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
          Length = 642

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/646 (56%), Positives = 455/646 (70%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD I  P  +K+LS  +L Q+A ELR + I  VS TGGHLG+ LGV+ELT A
Sbjct: 2   SDRPQTPLLDQITRPADLKSLSDAQLTQVAQELRQETISAVSVTGGHLGAGLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+I+WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES +D FG  H
Sbjct: 62  LHAVFDTPRDKIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P +EL+ VAKG    +  P  E A +
Sbjct: 182 NDN-EMSI--------APPVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE LG  Y+GP+DGH++D L+ +L  VK  + TGP+LIHV+T+K
Sbjct: 233 AKDMLKGM--AVGGTLFESLGFSYLGPIDGHDMDQLLPVLRTVK-ARATGPILIHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TG+Q K+ +   SYT+ F + L+  A  D  + A+ A
Sbjct: 290 GKGYAPAEAARDKGHATAKFDMVTGEQKKAPSNAPSYTSVFGKELVRLAAEDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+L   R+P+R FDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLSLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ +MA LP MVVMA +DEAEL HM ATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYMANLPGMVVMAAADEAELAHMTATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G GV++P   +   LE+GKGR++ EG+RVA+L +GT +     A
Sbjct: 470 AAYDDGPIAFRYPRGEGEGVDMPEAPE--VLEIGKGRMIQEGKRVAILSFGTRLGEVRKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  +I  LA  HE LIT+EEG++GGFGSHV Q LA++G
Sbjct: 528 AEALSARGITPTIADARFAKPLDRDMILKLAADHEALITIEEGAVGGFGSHVAQLLAEEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SPAD    A +    I A V  +LG
Sbjct: 588 IFDSGLKYRSMVLPDTFIDQASPADMYNVAAMNAPQIEAKVLEVLG 633


>gi|452750501|ref|ZP_21950248.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
           JLT2015]
 gi|451961695|gb|EMD84104.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
           JLT2015]
          Length = 615

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/616 (59%), Positives = 449/616 (72%), Gaps = 14/616 (2%)

Query: 94  LKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKI 153
           ++QLADE+RA++I  VS+TGGHLG+ LGV+ELTVALHY+FN P+DR++WDVGHQ YPHKI
Sbjct: 1   MRQLADEVRAEMIDAVSQTGGHLGAGLGVVELTVALHYIFNTPEDRLIWDVGHQAYPHKI 60

Query: 154 LTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVV 213
           LTGRRD+M T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG AV   L GR    +
Sbjct: 61  LTGRRDRMRTIRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAVANKLSGRDGKAI 120

Query: 214 AVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSR 273
           AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+R
Sbjct: 121 AVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLAR 171

Query: 274 LQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVD 333
           + S+     LR +AK    ++    +  A+K +EYARGM   +G TLFEELG YY+GP+D
Sbjct: 172 MVSSSEYLGLRSLAKKFASRLHKRFYNAASKAEEYARGM--ATGGTLFEELGFYYVGPID 229

Query: 334 GHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK 393
           GHN+D L+ +LE V++++  GP+L+HVVT+KG GY  AE++ADKYHGV KFD  +G+   
Sbjct: 230 GHNLDHLIPVLENVRDSEQ-GPILVHVVTKKGHGYAPAEQSADKYHGVTKFDVVSGEMAP 288

Query: 394 SSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHA 453
             A   SYT  FA+ALIAEAE D  V AI AAM GGTG++ F + FP R FDVGIAEQH 
Sbjct: 289 KKAGPPSYTGVFAKALIAEAERDDRVCAITAAMPGGTGVDKFAQHFPERSFDVGIAEQHG 348

Query: 454 VTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG 513
           VTFAAGLA +G++PF AIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH G
Sbjct: 349 VTFAAGLAAQGMRPFAAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGQTHAG 408

Query: 514 SFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI 573
           SFDVT++A LPNMVVMA +DEAEL HM  TAA  DD P  FRYPRGNG GVELP   +  
Sbjct: 409 SFDVTYLATLPNMVVMAAADEAELVHMTHTAAEYDDGPIAFRYPRGNGTGVELPETPE-- 466

Query: 574 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 633
            LE+GKGR+L EG +VA+L  GT +   L A+  L++ GL  TVAD RF KPLD ALIR 
Sbjct: 467 RLEIGKGRVLREGSKVAILSLGTRLGEALIAADELDAKGLPTTVADLRFAKPLDTALIRK 526

Query: 634 LAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 693
           LA +H+VL+TVEEG+IGG G+HV+   + +GLLD  +K R + LPD + D   P  Q  +
Sbjct: 527 LAATHDVLVTVEEGAIGGLGAHVLTLASDEGLLDAGLKIRTMRLPDIFQDQDDPKRQYEE 586

Query: 694 AGLTPSHIAATVFNIL 709
           AGL    I   V   L
Sbjct: 587 AGLDAPAIVRKVLEAL 602


>gi|222147754|ref|YP_002548711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
 gi|254782057|sp|B9JSL2.1|DXS_AGRVS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221734742|gb|ACM35705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
          Length = 639

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/648 (56%), Positives = 464/648 (71%), Gaps = 16/648 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + +P TPLLD + +P  ++ +  +++ Q+A ELR ++I  VS TGGHLG+ LGV+ELT+A
Sbjct: 2   TSKPNTPLLDQVVFPSDLRKIEDKDMPQVARELRDEMIDAVSVTGGHLGAGLGVVELTLA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VFN P+DR+++DVGHQ YPHKILTGRR+++ T+RQ  GLSGFTKR+ESEYD FG  H
Sbjct: 62  IHKVFNTPEDRLIFDVGHQCYPHKILTGRRERIRTLRQEHGLSGFTKRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISAGLGMAV  +L      V+AVIGDGAM+AG A+EA+NNAG LD+ +IVILNDN 
Sbjct: 122 SSTSISAGLGMAVAAELGQTDRKVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PP GA+S+ L+RL S R    +RE+ K +T  +G  +     +  E+
Sbjct: 181 DMSIA--------PPTGAMSAYLARLASGRTYMGMREIGKKLTAYLGKNIDRAITRAVEH 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           ARG ++G   T+FEE+G Y+IGP+DGH+ D L+ +L  V++    GPVLIHVVT+KG+GY
Sbjct: 233 ARGYVTGG--TMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDN-AKGPVLIHVVTQKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE AADKYHGV  FD  TG Q K+     SYT  FA+AL+ EA +D  +V I AAM  
Sbjct: 290 APAEAAADKYHGVNTFDVITGTQAKAKPNAPSYTAVFADALVEEARLDDKIVGITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+     FP R FDVGIAEQHAVTFAAGLA EG KPFCA+YS+F+QR YDQVVHDV 
Sbjct: 350 GTGLDKLQNLFPERTFDVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRF +DRAG VGADGPTH GSFD  F+A LP  VVMA +DEAEL HMV TAAA D
Sbjct: 410 IQGLPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG G+GV++P   +G  L +GKGRI+ EG +VALL +GT +  CL A+  L
Sbjct: 470 EGPISFRYPRGEGVGVQMP--ERGEILPIGKGRIIKEGSKVALLSFGTRLAECLVAAEDL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           ++ GL  TVADARF KPLD  LIR LA+ H VLITVEEG++GGFGS V+  LA +GLLD 
Sbjct: 528 DAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDH 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
            +K R LVLPD ++D   P     +AGL    I +TVF  L  +R+AL
Sbjct: 588 GLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTAL--SRDAL 633


>gi|159045834|ref|YP_001534628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
 gi|157913594|gb|ABV95027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
          Length = 643

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/646 (56%), Positives = 454/646 (70%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TP+LD +  P  MK LS REL  LA +LRA+ I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPHTPVLDRVKTPDDMKGLSDRELVALARDLRAETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+DRI+WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDAPRDRIIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGA++AG A+EA+NNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGAPEHGIGDAIAVIGDGAISAGMAFEALNNAGHLKKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PP GA+SS L+RL +  P +E +  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPTGAMSSYLNRLYAGAPFQEFKAAAKGAVSLLPPPFQEGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  + M  G   TLFEELG  Y+GP+DGH+++ L+++L  VK  +  GP+LIH +T+K
Sbjct: 233 AKDILKHMTIGG--TLFEELGFSYVGPIDGHDMEQLLSVLRTVK-ARADGPILIHAITKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE AADK H  AKFD  +G Q K+ +   +YT  FAE LI EAE D  +VA+ A
Sbjct: 290 GKGYAPAEGAADKGHATAKFDVVSGAQKKAPSNAPTYTNVFAETLIDEAERDSRIVAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+ F +RF  R FDV IAEQH VTF AGLA  G+KPFC +YS+F+QR YDQVV
Sbjct: 350 AMPSGTGLDKFAKRFAARTFDVAIAEQHGVTFCAGLAAGGMKPFCTMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ LPVRFA+DRAGLVGADG TH G++D  +++ LPNMVVMA +DEAEL HMVATA
Sbjct: 410 HDVALQNLPVRFAIDRAGLVGADGATHAGAYDTAYLSNLPNMVVMAAADEAELRHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
            A D  P  FR+PRG G+GVELP   +G+PLE+GKGRI+ EG RVA+L +GT +     A
Sbjct: 470 VAHDSGPIAFRFPRGEGVGVELP--ERGVPLEIGKGRIIAEGSRVAILSFGTRLAEVREA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              L + G+  TVADARF KPLD  LI  LA  HE LIT+EEG++GGFGSHV Q L+++G
Sbjct: 528 CEALTARGITPTVADARFAKPLDRDLILRLAAEHEALITIEEGAVGGFGSHVAQLLSEEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +ID  SP D    AGL    I A V ++LG
Sbjct: 588 VFDTGLKFRSMVLPDTFIDQASPRDMYDIAGLNAPDIEAKVLSVLG 633


>gi|427411739|ref|ZP_18901941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           ATCC 51230]
 gi|425710029|gb|EKU73052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           ATCC 51230]
          Length = 639

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/646 (56%), Positives = 455/646 (70%), Gaps = 14/646 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+  P  ++ L   +L+QLADELRA+ I  V  TGGHLGS LGV+ELT A+HY
Sbjct: 4   PSTPLLDTVKIPADLRKLQPDQLRQLADELRAETIAAVGVTGGHLGSGLGVVELTTAIHY 63

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  HSST
Sbjct: 64  VFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHSST 123

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG AV   ++ +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S
Sbjct: 124 SISAALGFAVANKMQDKPGKGIAVIGDGAMSAGMAYEAMNNAREAGNRLVVILNDN-DMS 182

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG LS+ L+RL S+R    LR++AK + +++  P+H+ A K DE+ARG
Sbjct: 183 IA--------PPVGGLSAYLARLVSSREFLGLRDMAKKLARKLPRPLHKAAKKTDEFARG 234

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M   +G TLFEELG YY+GP+DGHN++ L+ +LE V++    GP LIHVVT+KG+GY  A
Sbjct: 235 M--ATGGTLFEELGFYYVGPIDGHNLEHLIPVLENVRDA-AEGPCLIHVVTQKGKGYGPA 291

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGV KFD  TG Q K+     SYT  FA+ALIAEA+ D  V AI AAM  GTG
Sbjct: 292 EAAADKYHGVQKFDVITGTQAKAPPGPPSYTNVFAQALIAEAQRDPRVCAITAAMPSGTG 351

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q 
Sbjct: 352 LDKFELAFPDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQN 411

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH GSFDVT++A LPN VVMA +DEAEL HMV T A  D  P
Sbjct: 412 LPVRFAIDRAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELTHMVHTCAVHDSGP 471

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRGNG GV +P   +   LE+GKGR++ EG +VA+L  GT ++  + A+  LE+ 
Sbjct: 472 IAVRYPRGNGTGVAMPEVAEA--LEIGKGRVVREGRQVAILSLGTRLEEAMKAADTLEAK 529

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  +V D RF KPLD ALIR +  +HEV +T+EEGSIGG G+HV+   +  GL D  +K
Sbjct: 530 GLSASVVDLRFAKPLDEALIRRMLTTHEVAVTIEEGSIGGLGAHVLTLASDLGLTDHGLK 589

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            R + LPD + D   P  Q A A L    I  TV   L      +E
Sbjct: 590 IRTMRLPDIFQDQDKPEQQYADARLDADAIVDTVLTALRHNSAGVE 635


>gi|224004236|ref|XP_002295769.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209585801|gb|ACI64486.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 747

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/706 (52%), Positives = 479/706 (67%), Gaps = 49/706 (6%)

Query: 62  SERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLG 121
           ++ G  +S     P+LDT+NYP  MK L ++ELKQLA ELR ++I  VSKTGGH  SSLG
Sbjct: 41  TDNGPPYSGPASKPILDTVNYPHDMKRLDMKELKQLAHELRWELIEAVSKTGGHFSSSLG 100

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           VIELTVALHYVF+ P+D I+WDV HQ YPHK+LTGRRD+  T+RQ  G+SGF KR ESEY
Sbjct: 101 VIELTVALHYVFDMPEDDIIWDVAHQCYPHKMLTGRRDRFPTLRQLGGISGFCKRKESEY 160

Query: 182 DCFGTGHSSTSISAGLGMAVGRDL-KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           D FG GHSSTSISA  GM+V + L   RKNN +AVIGDGA+T G AYEAMNNAGYL S M
Sbjct: 161 DSFGAGHSSTSISAAQGMSVAKSLLNKRKNNCIAVIGDGAITGGMAYEAMNNAGYLSSRM 220

Query: 241 IVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 299
           IV+LNDN QVSLPT T   G + P   LS+  S L  ++P ++ R+ AK + +     + 
Sbjct: 221 IVVLNDNGQVSLPTGTQTAGGVRPASQLSAYTSNLIVSKPFQDFRDFAKSLNRLFPENVQ 280

Query: 300 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIH 359
           ++  ++DEYARG+++G   T+FEELG +Y+GP+DGH++D++V ILE+++++ +T PVL+H
Sbjct: 281 DVNKRLDEYARGLVTGG--TVFEELGFFYVGPIDGHDLDNMVPILEKLRDSDSTKPVLLH 338

Query: 360 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDV 419
           + T KG+GYP A  A+DK HGV KFD ATG Q K  A + S T+ FA A+I  A  D+ +
Sbjct: 339 IKTNKGQGYPPALAASDKMHGVGKFDIATGIQVKGKAASPSLTSIFANAMIDAATEDRAI 398

Query: 420 VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRA 479
           V I AAM GGTG+++F RRFP R +DVGIAEQHAVTFAAG+ACEGLKPFC IYS+FMQR 
Sbjct: 399 VGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGMACEGLKPFCCIYSTFMQRG 458

Query: 480 YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFH 539
           YDQVVHDV +Q LPVR  +DRAG+VG DGPTH G +D+ ++ C+PN+ +M+PSDE EL +
Sbjct: 459 YDQVVHDVAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYLGCIPNLTIMSPSDEIELKN 518

Query: 540 MVATAAAIDDRPSCFRYPRGNG---------IGVELPPGN---KGIPLEVGKGRI----- 582
           MV T AA DD P+  RYPRG G          G EL  G    KG  +++GKGRI     
Sbjct: 519 MVMTCAAFDDGPTVLRYPRGVGYGAEKLQNLFGYELENGEVPAKGEVIKIGKGRIIRRPG 578

Query: 583 -------------------------LIEGERVALLGYGTAVQSCLAASALLESNG--LRL 615
                                    L++  R+A+L  GT +   L A+  +E     L +
Sbjct: 579 GIHALKEELTANGSSDSRMGAGSRGLLKENRIAILTLGTRLSEALVAADEIEGANPDLAV 638

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL-DGTVKWRP 674
           TVADARF KPLD  LIR L+ ++ +++TVEEGSIGGFG HV+ FL+ DG L DG +K+RP
Sbjct: 639 TVADARFMKPLDEDLIRELSDNNGIIVTVEEGSIGGFGDHVLHFLSLDGALDDGELKFRP 698

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           +VLPD Y +  +  +Q   AGL   HI  TV  +     EA  +++
Sbjct: 699 MVLPDTYFEAATQYEQYEMAGLNSHHIRDTVLRLANVKVEAAPVLA 744


>gi|197104378|ref|YP_002129755.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
           HLK1]
 gi|254782082|sp|B4RGW0.1|DXS_PHEZH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|196477798|gb|ACG77326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
           HLK1]
          Length = 638

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/639 (58%), Positives = 458/639 (71%), Gaps = 14/639 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT++ P   + LSI +L+QLADE+RA+ I  VS+TGGHLG+ LGV+ELTVALH+
Sbjct: 3   PVTPLLDTVSSPADTRGLSIAQLRQLADEVRAETIDAVSQTGGHLGAGLGVVELTVALHH 62

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           V+  PKD ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES+YD FG  H++T
Sbjct: 63  VYETPKDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESDYDPFGAAHAAT 122

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG    RD +GR N VVAVIGDG+M+AG AYEAMNNA      + VILNDN  +S
Sbjct: 123 SISAALGFCAARDREGRDNKVVAVIGDGSMSAGMAYEAMNNAYETTKQLTVILNDN-DMS 181

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG +S+ ++RL S    + LR + K V++    P+ E A K +EYARG
Sbjct: 182 IA--------PPVGGMSAYMARLVSGGGYQSLRNLGKAVSRAFPRPLQEAARKAEEYARG 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M++G   T FEELG YY+GP+DGH++D LV +L+  +      PVL+HVVT+KG+GY  A
Sbjct: 234 MVTGG--TFFEELGFYYVGPIDGHDMDALVHVLQNARKIDDK-PVLVHVVTQKGKGYAPA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EKAADKYHGV KFD  TG Q KS A   SYT  FA+ L+  AE D+ VVAI AAM  GTG
Sbjct: 291 EKAADKYHGVVKFDVVTGAQAKSQAAAPSYTKVFAQELVKHAERDERVVAITAAMPSGTG 350

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF +RFP R FDVGIAEQHAVTFAAGLA +G+KPF AIYS+F+QR YDQVVHDV +Q 
Sbjct: 351 LDLFGQRFPERTFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVAIQS 410

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADGPTH GSFDV FM  LP MVVM P+DEAEL   +ATA AIDDRP
Sbjct: 411 LPVRFAIDRAGLVGADGPTHAGSFDVGFMGQLPGMVVMGPADEAELARAIATAVAIDDRP 470

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S FRYPRG G+GVE+P      PLE+G+GRI+ EG  VA+L +GT +   L A+ +L + 
Sbjct: 471 SAFRYPRGEGVGVEIP--ALADPLEIGRGRIVREGTAVAILSFGTRLGESLKAADMLAAR 528

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  L+  LA+ HE LITVEEG++GGFG  V+  LA+ G LD  +K
Sbjct: 529 GLSATVADARFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLK 588

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            R L LPD + D   P    AQAGL    I       LG
Sbjct: 589 IRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAALG 627


>gi|332558698|ref|ZP_08413020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
 gi|332276410|gb|EGJ21725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
          Length = 648

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/645 (56%), Positives = 455/645 (70%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +  P  MK LS  EL++LADE+R++VI  V++TGGHLGSSLGV+ELTVA
Sbjct: 5   TPRPETPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VFN P D+++WDVGHQ YPHKILTGRR++M T+RQ  GLSGFTKRSES YD FG  H
Sbjct: 65  LHAVFNTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+GR+L     + +AVIGDG++TAG AYEA+N+AG+L+  + VILNDN 
Sbjct: 125 SSTSISAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGAL+  L  L S  P   LR  A G+   + GP+ + A +  + 
Sbjct: 184 DMSI--------APPVGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQL 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM  G   TLFEELG  Y+GP+DGH+++ L+  L   +  +TTGPVLIHVVT+KG+GY
Sbjct: 236 VTGMPGGG--TLFEELGFTYVGPIDGHDMEALLQTLRAAR-ARTTGPVLIHVVTKKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV KFDP TG+Q KS A   +YT  F   L  EA  D  +VAI AAM  
Sbjct: 293 APAENAPDKYHGVNKFDPVTGEQKKSVANAPNYTKVFGSTLTEEAARDPRIVAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++  +RFP R FDVGIAEQHAVTFAAGLA  G+KPFCAIYSSF+QR YDQ+ HDV 
Sbjct: 353 GTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADG TH G+FDV F+  LPNM VMA +DEAEL HM+ATA A D
Sbjct: 413 LQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTSLPNMTVMAAADEAELIHMIATAVAFD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P   +G  LE G+GR++ EG  VA+L +G  +   L A+ LL
Sbjct: 473 EGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G+ +TVADARF +PLD  LI  L + H  L+TVE+G++GGFG+HV+ +LA  G  DG
Sbjct: 531 EAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDG 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +  R + LPDR+I+  SP D  A AGL    IAAT    L + R
Sbjct: 591 GLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALVRGR 635


>gi|259418101|ref|ZP_05742020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
           TrichCH4B]
 gi|259347007|gb|EEW58821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
           TrichCH4B]
          Length = 642

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/649 (56%), Positives = 454/649 (69%), Gaps = 18/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD I  P  +K LS  +L+QLA ELR + I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   TDRPQTPLLDQIASPADLKRLSDAQLEQLAHELRQETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ PKD+++WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES +D FG  H
Sbjct: 62  LHAVFDTPKDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESAFDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKN----NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G       + +AVIGDGAM+AG A+EAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFSVARDLGGVTEEGLGDAIAVIGDGAMSAGMAFEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P  +L+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSIA--------PPVGALSSYLSRLYTEAPFHDLKAAAKGAVSLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE LG  YIGP+DGH++D L+ +L  VK  +  GP+LIH VT+K
Sbjct: 233 AKDMLKGM--AMGGTLFESLGFSYIGPIDGHDMDQLLPVLRTVK-ARANGPILIHAVTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TG+Q K+ +   SYT+ F + L   A  D  + A+ A
Sbjct: 290 GKGYRPAEVARDKGHATAKFDMVTGEQKKAPSNAPSYTSIFGKTLAELAAQDSKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNL   R+P+R FDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ FMA LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIGFMANLPGMVVMAAADEAELKHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G GVE+P   +   LE+GKGR++ +G+RVALL +GT +     A
Sbjct: 470 AAYDDGPIAFRYPRGEGEGVEMP--EQPEILEIGKGRMIQDGKRVALLSFGTRLGEVRKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  +I +LA  HE LITVEEG++GGFGSHV Q L+ +G
Sbjct: 528 AEALAARGITPTIADARFAKPLDRDMILNLAAEHEALITVEEGAVGGFGSHVAQLLSDEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           + D  +K+R +VLPD +ID  SP D    A +   HI A V ++LG  R
Sbjct: 588 VFDEGLKFRSMVLPDTFIDQASPKDMYDDAAMNAEHIEAKVLDVLGVAR 636


>gi|356557843|ref|XP_003547220.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 487

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/413 (84%), Positives = 380/413 (92%)

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           +A GMIS SGSTLFEELGLYYIGPVDGHN++DLVAIL EVKNT+TTGP +IHVVTEKG G
Sbjct: 56  HAHGMISSSGSTLFEELGLYYIGPVDGHNMNDLVAILNEVKNTETTGPCVIHVVTEKGHG 115

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           YPYAE+AA KYH V+KFDPATG+QFK+ A T+SY+TYFAEALIAEAE DKD++ IHAAMG
Sbjct: 116 YPYAERAAAKYHVVSKFDPATGEQFKAKATTKSYSTYFAEALIAEAEADKDIIGIHAAMG 175

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
           GGTG+N FLRRFPTRCFDVGIAEQHAVTFAAGLACEG KPFCAI SSFMQRAYDQVVHDV
Sbjct: 176 GGTGMNHFLRRFPTRCFDVGIAEQHAVTFAAGLACEGFKPFCAINSSFMQRAYDQVVHDV 235

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
           DLQKLPVRF +DRAGLVG DG THCG+FDVTFMACLPNMVVMAPSDEAELFHMVATAAAI
Sbjct: 236 DLQKLPVRFGIDRAGLVGPDGCTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 295

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           DDRPSCFRYPRGNG+GVELPPGNKGIPLE+GKGRILIEGERVALLGYG+ VQSC+AA+ L
Sbjct: 296 DDRPSCFRYPRGNGVGVELPPGNKGIPLEIGKGRILIEGERVALLGYGSTVQSCVAAATL 355

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 667
           L   GL  TV +ARFCKPLDH+LIRSLAKSHEVLITVEEGSIGGFGSHV QF+A DGLLD
Sbjct: 356 LGDLGLHATVVNARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLD 415

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           G +KWRP+VLPD YIDHGSPADQL +A LTPSHIAATVFN+LGQ RE LE+M+
Sbjct: 416 GKLKWRPMVLPDCYIDHGSPADQLNEARLTPSHIAATVFNLLGQAREELEVMT 468


>gi|413953253|gb|AFW85902.1| hypothetical protein ZEAMMB73_111194 [Zea mays]
          Length = 611

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/607 (58%), Positives = 438/607 (72%), Gaps = 9/607 (1%)

Query: 117 GSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKR 176
           G+   V+ELT+A+HYVFNAP D+ILWD G   Y HKILTGRR   HT+ Q +GLSGFT R
Sbjct: 9   GADRSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTITQKNGLSGFTSR 68

Query: 177 SESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL 236
            ESEYD FG GH   S+SAGLGMAV RD+ GRKN +V VI +    AGQ YEAM +AG+L
Sbjct: 69  FESEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFL 128

Query: 237 DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG 296
           DS+M+VILND+    LP A   G    V A SSALS++QS++  R  RE AKG+ K  G 
Sbjct: 129 DSNMVVILNDSCHTLLPKAD-GGAKMSVNAFSSALSKIQSSKGFRRFREAAKGLAKWFGK 187

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
            MHE AAKVDEYARGMI   G+TLFEELGLYYIGP+DG N+DDL+ +L+EV +  +TGPV
Sbjct: 188 GMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDLICVLKEVASLDSTGPV 247

Query: 357 LIHVVT--EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAE 414
           L+HV+T  E   G     +      G +   P   K F  +  +++Y   F EAL AEAE
Sbjct: 248 LVHVITGTENDTGGIIGSEINAVEEGPSNSSPDLLK-FLGTGLSRTYNDCFVEALTAEAE 306

Query: 415 VDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSS 474
            DK +V +H  MG    L LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I S+
Sbjct: 307 NDKRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPST 366

Query: 475 FMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDE 534
           F+QRAYDQ++ DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+PS+E
Sbjct: 367 FLQRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNE 426

Query: 535 AELFHMVATAAAIDDRPSCFRYPRGNGIGV--ELPPGNKGIPLEVGKGRILIEGERVALL 592
            EL  MVATAA I+DRP CFRYPRG  +G    +  GN   P E+GKG IL+EG+ +A L
Sbjct: 427 DELIDMVATAAMIEDRPICFRYPRGAIVGTSGSVTYGN---PFEIGKGEILVEGKEIAFL 483

Query: 593 GYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGF 652
           GYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR+L + H  LITVEEG++GGF
Sbjct: 484 GYGEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGF 543

Query: 653 GSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           GSHV QF++ DGLLDG  KWRP+VLPDRYI+H S A+QL  AGLT  HIAAT   +LG+ 
Sbjct: 544 GSHVSQFISLDGLLDGRTKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRH 603

Query: 713 REALEIM 719
           R+AL +M
Sbjct: 604 RDALLLM 610


>gi|146278064|ref|YP_001168223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556305|gb|ABP70918.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 648

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/645 (56%), Positives = 455/645 (70%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TPLLD +  P  MK L+  EL++LADE+R++VI  V++TGGHLGSSLGV+ELTVA
Sbjct: 5   TPRPETPLLDRVCCPADMKALNDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVA 64

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VFN P D+++WDVGHQ YPHKILTGRR++M T+RQ  GLSGFTKRSES+YD FG  H
Sbjct: 65  LHAVFNTPTDKLIWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESDYDPFGAAH 124

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+GR+L     + +AVIGDG++TAG AYEA+N+AG+L+  + VILNDN 
Sbjct: 125 SSTSISAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDN- 183

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVGAL+  L  L S  P   LR  A G+   + GP+ + A +  + 
Sbjct: 184 DMSI--------APPVGALARYLVNLSSKAPFATLRAAADGIESALPGPLRDGARRARQL 235

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM  G   TLFEELG  Y+GP+DGH++  L+  L   +  +TTGPVLIHVVT KG+GY
Sbjct: 236 VTGMPGGG--TLFEELGFTYVGPIDGHDMPSLLQTLRAAR-ARTTGPVLIHVVTRKGKGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A DKYHGV KFDP TG+Q KS A   +YT  F   L  EA  D  +VAI AAM  
Sbjct: 293 APAENAPDKYHGVNKFDPVTGEQKKSVANAPNYTKVFGTTLTDEAARDPRIVAITAAMPS 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++  +RFP R FDVGIAEQHAVTFAAGLA  G+KPFCAIYSSF+QR YDQ+ HDV 
Sbjct: 353 GTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHDVA 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADG TH G+FDV F+  LPN+ VMA +DEAEL HM+ATA A D
Sbjct: 413 LQNLPVRFVIDRAGLVGADGATHAGAFDVGFLTTLPNLTVMAAADEAELVHMIATAVAFD 472

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P   +G  LE G+GR++ EG  VA+L +G  +   L A+ LL
Sbjct: 473 EGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLL 530

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G+ +TVADARF +PLD  LI  L + H  L+TVE+G++GGFG+HV+ +LA  G  DG
Sbjct: 531 EAEGVSVTVADARFSRPLDTGLIDQLVRHHPALVTVEQGAMGGFGAHVMHYLANSGGFDG 590

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +  R + LPDR+I+  SP D  A AGL    IAAT  + L + R
Sbjct: 591 GLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARSALARGR 635


>gi|84514695|ref|ZP_01002059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
           SKA53]
 gi|84511746|gb|EAQ08199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
           SKA53]
          Length = 637

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/645 (56%), Positives = 464/645 (71%), Gaps = 14/645 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S +P TPLLD +  P  MK+LS  +L++LADELRA+ I  VS TGGHLG+ LGV+E+TVA
Sbjct: 2   SDQPNTPLLDKVQTPADMKSLSDAQLRKLADELRAETIAAVSVTGGHLGAGLGVVEMTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+APKD+I+WDV HQ+YPHKILTGRRD++ T+R   GLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDAPKDKIIWDVSHQSYPHKILTGRRDRIRTIRTEGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG AV RDL G   + +A+IGDGA++AG AYEAMNNAG+L   +IVILNDN 
Sbjct: 122 SSTSISAALGFAVARDLGGDPGDAIAIIGDGAISAGMAYEAMNNAGHLGKRLIVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGA+SS LS+L +  P +E +  AKG    +  P  E A +  + 
Sbjct: 181 EMSIA--------PPVGAMSSYLSQLYAGAPFQEFKAAAKGAVSLLPEPFREGAKRAKDV 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + M  G   TLFE+LG  Y+GP+DGH++D L+++L  VK  +  GP+LIH +T+KG+GY
Sbjct: 233 LKHMTVGG--TLFEQLGFSYVGPIDGHDMDQLLSVLRTVK-ARADGPILIHAITKKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE A+DK H  AKFD  TGKQ K+ +   SYT+ FAE+L+  A  D  + A+ AAM  
Sbjct: 290 APAESASDKGHATAKFDLVTGKQAKAPSNAPSYTSVFAESLLKHAAADPRICAVTAAMPD 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL+ F+ R+ +RCFDVGIAEQHAVTF+AGLA  G++PFCAIYS+F+QR YDQ+VHDV 
Sbjct: 350 GTGLSKFMERYASRCFDVGIAEQHAVTFSAGLAAGGMRPFCAIYSTFLQRGYDQIVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q+LPVRFA+DRAGLVGADG TH GSFDV F+A LP  VVMA +DEAEL  MVATAAA D
Sbjct: 410 IQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVMAAADEAELVRMVATAAAYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FR+PRG G+GVE+P      PLE+GKGR++ EG +VA+L +GT +   + A   L
Sbjct: 470 EGPIAFRFPRGEGVGVEIP--QDATPLEIGKGRMIREGAQVAILSFGTRLSEVMKACETL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ G++ TVADARF KPLD  LI  LA  H+ LITVEEG++GGFGSHV Q LA +G+ D 
Sbjct: 528 EAKGIKPTVADARFAKPLDRDLILQLAAGHDALITVEEGAVGGFGSHVGQLLADEGVFDH 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            +++R +VLPD +ID  SP      AG+  +HI A V   LG  R
Sbjct: 588 GLRFRSMVLPDTFIDQASPKAMYDVAGMNAAHIEAKVLEALGIAR 632


>gi|220926882|ref|YP_002502184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
           ORS 2060]
 gi|219951489|gb|ACL61881.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
           2060]
          Length = 654

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/653 (57%), Positives = 465/653 (71%), Gaps = 26/653 (3%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD +  P  ++ L   +L+QLADELRA+ I  VS TGGHLG+ LGV+ELTVALHYVF 
Sbjct: 7   PLLDRVRDPADLRALPESDLRQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFT 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  HSSTSIS
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGR----------KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           AGLGMA+ RDL             + NVVAVIGDG+++AG AYEAMNNAG L S +IVIL
Sbjct: 127 AGLGMAIARDLAEAAARARGETPARRNVVAVIGDGSISAGMAYEAMNNAGALRSRLIVIL 186

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN              PPVGA+S+ L+RL S    R LR+ AK   + +   +++ AA+
Sbjct: 187 NDNDM---------SIAPPVGAMSAYLARLVSGDTYRSLRDTAKQFGRLLPKALYDTAAR 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +EYARG+++G G T+FEELG +Y+GP+DGHN+D L+ +L+ V++    GPVL+HVVT+K
Sbjct: 238 AEEYARGILAGGG-TMFEELGFHYVGPIDGHNLDHLLPVLKNVRDAPE-GPVLVHVVTQK 295

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE AAD+ H V KFD  +G+Q K+     SYT  F E+L+  A  D+ VVAI A
Sbjct: 296 GKGYAPAEAAADRGHAVVKFDVLSGQQVKAKPNAPSYTRVFGESLVKAAAADETVVAITA 355

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTG+++F +  P R FDVGIAEQHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVV
Sbjct: 356 AMPSGTGVDIFAKAHPERTFDVGIAEQHAVTFAAGLAAEGFRPFCAIYSTFLQRAYDQVV 415

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q LPVRFA+DRAGLVGADG TH G+FD+ ++ CLPN+ VMA +DEAEL HMVATA
Sbjct: 416 HDVAIQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNLTVMAAADEAELVHMVATA 475

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE--GERVALLGYGTAVQSCL 602
            A D  P   RYPRG G+GV+LP   +G  L +GKGR+L    G RVALL  GT +   L
Sbjct: 476 HAHDAGPIALRYPRGEGVGVDLP--ERGEVLAIGKGRVLRRPPGARVALLSLGTRLAEAL 533

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A+  LE +G+ +TVADARF KPLD ALI  LA SHEVL+T+EEGS GGFG+ V+  LA 
Sbjct: 534 KAADRLEESGIGVTVADARFAKPLDEALILDLAGSHEVLVTLEEGSTGGFGAMVLHLLAA 593

Query: 663 DGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            G LD GTV+ R L LPD Y DH SP    AQAGL    I  TV ++L + R+
Sbjct: 594 RGALDAGTVRVRTLTLPDVYQDHDSPERMYAQAGLDAPAIVRTVTDLLPEERK 646


>gi|71083316|ref|YP_266035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|118595598|sp|Q4FN07.1|DXS_PELUB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71062429|gb|AAZ21432.1| 1-D-deoxyxylulose 5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 637

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/644 (53%), Positives = 462/644 (71%), Gaps = 14/644 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            L  IN+P  ++ LS  +L+++++E+R ++I  VS+TGGHLG+ LGV+ELTVALHYVF+ 
Sbjct: 6   FLKDINFPSDLRKLSENDLQEVSNEVRKEMIDAVSETGGHLGAGLGVVELTVALHYVFDT 65

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGR+ K+ T+RQ +GLSGFTKRSESEYD FG  HSSTSIS+
Sbjct: 66  PNDRLIWDVGHQTYPHKILTGRKSKIKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISS 125

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA    L  + NN++AVIGDGA++AG AYEAMNNAG   + MIVILNDN  +S+   
Sbjct: 126 ALGMAEANKLSNKLNNIIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDN-DMSIA-- 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGA+ + L++L + +    LRE  K +           A K +++ R  ++G
Sbjct: 183 ------KPVGAMRTYLAKLLTGKIYFSLRETFKLIVSAFSKRFSVKAGKAEDFLRSAVTG 236

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLF  LG YY+GP+DGH++  L+ IL+  +++K  GP++IH+ T+KG+GY YAEKA+
Sbjct: 237 G--TLFNSLGFYYVGPIDGHDLSTLIPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKAS 294

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           D YHGV+KF+  TG+Q KS     +YT  FA  L+  AE D  VV + AAM GGTG+++F
Sbjct: 295 DHYHGVSKFNVVTGEQVKSGTNLPAYTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIF 354

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            + FP R FDVGIAEQHAVTFAAGLA EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVR
Sbjct: 355 AKDFPKRMFDVGIAEQHAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVR 414

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DRAGLVGADG TH GSFD+T+++ LPN +VMAPSDEAEL  M  T+  I+++P   R
Sbjct: 415 FIIDRAGLVGADGSTHAGSFDITYLSTLPNFIVMAPSDEAELVKMTNTSMTINNKPCAIR 474

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRGNGIGVELP  ++ I  E+GKGR++ EG++V +L  GT ++ C  A+A L++ G+  
Sbjct: 475 YPRGNGIGVELPSIDENI--EIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIES 532

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           T+ DARF KPLD  LI   A+ HE +ITVEEGSIGGFGSHV   L++ G+ D  +K+R +
Sbjct: 533 TIVDARFAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTM 592

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
           +LPD +I+  SP      AGL  S I+  + +IL  T+E+++++
Sbjct: 593 ILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL-FTKESIKVV 635


>gi|85703103|ref|ZP_01034207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
 gi|85672031|gb|EAQ26888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
          Length = 643

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/646 (57%), Positives = 457/646 (70%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD    P  +K LS  +L QLA ELR++ I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 3   SDRPKTPLLDQTASPADLKRLSDPQLVQLAHELRSETISAVSETGGHLGAGLGVVELTVA 62

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+AP+D+I+WDV HQ YPHKILTGRRD++ T+RQ DGLSGFTKRSES YD FG  H
Sbjct: 63  LHAVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKDGLSGFTKRSESPYDPFGAAH 122

Query: 189 SSTSISAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGAM+AG A+EAMNNAG+L   +IVIL
Sbjct: 123 SSTSISAALGFAVARDLGGNCPSGLGDAIAVIGDGAMSAGMAFEAMNNAGHLKKRLIVIL 182

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P ++ +  AKG    +  P  E A +
Sbjct: 183 NDN-EMSIA--------PPVGALSSYLSRLYAGEPFQDFKAAAKGAISLLPPPFQEGARR 233

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +G+  G   TLFEELG  Y+GP+DGH++  L+ +L  VK  +  GP+LIHV+T+K
Sbjct: 234 AKDMLKGLTVGG--TLFEELGFSYLGPIDGHDLHQLLPVLRTVK-ARANGPILIHVLTKK 290

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE+A D  H  AKFD  TG+Q KS +   SYT+ FA+AL+A A  D  + A+ A
Sbjct: 291 GKGYGPAERARDGGHATAKFDVLTGEQRKSPSNAPSYTSVFAKALLAHAGQDDKICAVTA 350

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGLNLF  R+P+R FDVGIAEQHAVTF+AGLA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 351 AMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFSAGLAAGGMKPFCALYSTFLQRGYDQVV 410

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G+FD  F+A LP  VVMA +DEAEL HMVATA
Sbjct: 411 HDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAFLANLPGFVVMAAADEAELVHMVATA 470

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
            A D+ P  FRYPRG G+GV +P   +G  LE+GKGRI+  G RVA+L +GT +   L A
Sbjct: 471 VAHDEGPIAFRYPRGEGMGVTMP--ERGEALEIGKGRIIQTGARVAILSFGTRLAEVLKA 528

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           S  L + G+  T+ADARF KPLD  LI  L ++HE LIT+EEG+IGGF SHV  FLA+  
Sbjct: 529 SESLRARGITPTIADARFAKPLDEKLILDLVQNHEALITIEEGAIGGFASHVSHFLAEAQ 588

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D   K+R +VLPD +ID  +  D  A A L  S I A V ++LG
Sbjct: 589 VFDRGFKFRSMVLPDTFIDQANAEDMYAVARLNASDIEARVLDVLG 634


>gi|254456404|ref|ZP_05069833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207083406|gb|EDZ60832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 638

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/644 (52%), Positives = 466/644 (72%), Gaps = 14/644 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            LD IN+P  +K +S ++L++++DE+R ++I  VS+TGGHLG+ LGV+ELTVALHYVF+ 
Sbjct: 7   FLDNINFPSDLKKISEKDLQKVSDEVRKEMISAVSETGGHLGAGLGVVELTVALHYVFDT 66

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+++WDVGHQ+YPHKI+TGR+ K+ T+RQ +GLSGFTKRSESEYD FG  HSSTSIS+
Sbjct: 67  PNDKLIWDVGHQSYPHKIITGRKKKIRTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISS 126

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+A    L  + +NV+AVIGDGA++AG AYEAMNNAG   + MIVILNDN  +S+   
Sbjct: 127 ALGIAEANKLANKTSNVIAVIGDGAISAGMAYEAMNNAGASKTKMIVILNDN-DMSIA-- 183

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGA+ + L++L + +     RE  K +T          A K +++ R  ++G
Sbjct: 184 ------KPVGAMRTYLAKLFTGKIYFSFRETLKLITSAFSKRFSAKAGKAEDFLRSAVTG 237

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLF  LG YY GP+DGH+++DL+ IL+  +++K  GP++IHV T+KG+GY YAEKA 
Sbjct: 238 G--TLFSSLGFYYAGPIDGHDLNDLIPILKNARDSKHEGPIMIHVKTQKGKGYSYAEKAT 295

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           D YHGV+KF+  TG+Q KS +   +YT  FA  L+  A+ D  +V I AAM GGTG+++F
Sbjct: 296 DNYHGVSKFNVETGEQIKSISNLPAYTKVFANTLVKHAQKDSKIVGITAAMPGGTGMDIF 355

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            + FP R FDVGIAEQHAVTF+AGLA EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVR
Sbjct: 356 GKEFPKRMFDVGIAEQHAVTFSAGLATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVR 415

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH GSFD+T+++ LPN +VMA SDEAEL  M+ T+  I+D+P   R
Sbjct: 416 FAIDRAGLVGADGSTHAGSFDITYLSTLPNFIVMAASDEAELVKMINTSVDINDKPCAIR 475

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRGNG+G+ELP  ++ I  E+GKGRI+ +G++  +L  GT ++ C  A+  L+S G+  
Sbjct: 476 YPRGNGVGLELPSIDEKI--EIGKGRIIQQGKQACILSLGTRLEECKFAAEELKSKGVST 533

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           T+ DARF KPLD  LI   A+ HEV+IT+EEGSIGGFGSHV   LA+ G+ D  +K+R +
Sbjct: 534 TIIDARFAKPLDRELILKCAREHEVMITIEEGSIGGFGSHVKNLLAETGVFDKGLKFRSM 593

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
            LPD +ID  +P +    AGL+ S I+  + +IL  T+++++++
Sbjct: 594 TLPDSFIDQDTPKNMYELAGLSSSQISKKILDIL-FTKDSIKVV 636


>gi|315498416|ref|YP_004087220.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
           48]
 gi|315416428|gb|ADU13069.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
           48]
          Length = 640

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/642 (56%), Positives = 459/642 (71%), Gaps = 18/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           +P TP+LDT+  P  +++LS  ELK LADE+RA+ I  VSKTGGHLGS+LGV+ELTVALH
Sbjct: 3   QPETPVLDTLTVPEAIRHLSAAELKTLADEVRAETIDVVSKTGGHLGSALGVVELTVALH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VF  P D ++WDVGHQ YPHKILTGRR+++ ++RQ  GLSGFTKRSES YD FG  H++
Sbjct: 63  HVFETPSDILIWDVGHQCYPHKILTGRRERIRSLRQGGGLSGFTKRSESPYDPFGAAHAA 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LG    RD KG  N VVAVIGDG+M+AG AYEAMNNA     ++ VILNDN  +
Sbjct: 123 TSISAALGFCAARDHKGETNKVVAVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDN-DM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVG +S+ L+ L S    + +R   K V +++   + E+  K +E++R
Sbjct: 182 SIA--------PPVGGMSAYLANLVSGGAYQAVRRFGKSVAERLPRALFEMVRKGEEFSR 233

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
             ++G   T FEELG YY+GP+DGH++D+L+++ + V++  T  PVL+HVVT+KG+GY  
Sbjct: 234 TYVTGG--TFFEELGFYYVGPIDGHDMDNLLSVFKRVRDI-TDRPVLVHVVTQKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE A+DKYHGVAKFD  TG+Q K  A   SYT  FA  LI +A++D  VVAI AAM  GT
Sbjct: 291 AEAASDKYHGVAKFDVITGEQAKPKANAPSYTEVFAAELIKQAQIDPKVVAITAAMPSGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+ F   FPTRC+DVGIAEQHAVTFAAGLA +G+KPFCA+YS+F+QR YDQV HDV LQ
Sbjct: 351 GLDRFAEVFPTRCYDVGIAEQHAVTFAAGLAADGMKPFCALYSTFLQRGYDQVAHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFA+DRAGLVGADG TH G+FD+ ++  LP M++MA +DEAEL  M+ATA A DD 
Sbjct: 411 DLPVRFAIDRAGLVGADGATHAGTFDIGYLGTLPGMMIMAAADEAELARMIATATAYDDG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           PS FRYPRG G+GVE+P     +P  L +G+GRI+ EG +VA+L  G  +   L A+ LL
Sbjct: 471 PSAFRYPRGEGVGVEIP----AVPETLAIGRGRIVREGSKVAILSLGARLPEALKAADLL 526

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + GL  TVADARF KPLD  LI  LA+ HE LITVEEG++GGFG+ V+ +LA +G LD 
Sbjct: 527 GARGLSTTVADARFAKPLDKELILQLARHHECLITVEEGAMGGFGAFVLHYLAGEGALDN 586

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +K R L LPDR+ DH  P    A AGL    IAA+    LG
Sbjct: 587 GLKIRTLTLPDRFQDHDKPEKMYADAGLDAQGIAASAMKALG 628


>gi|16126307|ref|NP_420871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
           CB15]
 gi|221235086|ref|YP_002517522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
           NA1000]
 gi|21263543|sp|Q9A6M5.1|DXS_CAUCR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782066|sp|B8GXC4.1|DXS_CAUCN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|13423547|gb|AAK24039.1| 1-deoxyxylulose-5-phosphate synthase [Caulobacter crescentus CB15]
 gi|220964258|gb|ACL95614.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 640

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/639 (58%), Positives = 456/639 (71%), Gaps = 18/639 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P   + LS+ ELKQLA E+RA+ I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 5   TPLLDTIASPADTRGLSLAELKQLAAEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
             PKD ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H++TSI
Sbjct: 65  ETPKDIVIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG    RD KG  N+V+AVIGDG++ AG AYEAMN A      +IVILNDN  +S+ 
Sbjct: 125 SAALGFCAARDAKGEDNSVIAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG +S+ L+ L S    R +R++ K V +++  PM E A K +EYARGM+
Sbjct: 184 --------PPVGGMSAYLANLVSGGAYRSVRKLGKTVVEKLPTPMREAARKAEEYARGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYA 371
           +G   T FEELG YYIGP+DGH++D LV++L   KN K  G  PVL+H VT+KG+GY  A
Sbjct: 236 TGG--TFFEELGFYYIGPIDGHDMDALVSVL---KNAKAFGDKPVLVHCVTQKGKGYAPA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADK H V KFD  TG+Q K++    SYT  FA+ LI +AE D  +VAI AAM  GTG
Sbjct: 291 EGAADKLHAVVKFDVVTGQQQKAAGGPPSYTKVFAQELIKQAEKDDKIVAITAAMPSGTG 350

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+LF + FP R FDVGIAEQHAVTFAAG+A +G+KPF AIYS+F+QR YDQVVHDV +Q 
Sbjct: 351 LDLFGKAFPERTFDVGIAEQHAVTFAAGMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQG 410

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFAMDRAGLVGADGPTH GSFD+ FM  LP MV+MA +DE EL  MVATAA IDDRP
Sbjct: 411 LPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRP 470

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S FRYPRG G+G+++P   +  PLE+GKGRI+ EG  VA++ +GT +   L A+ LL + 
Sbjct: 471 SAFRYPRGEGLGLDMPAIAE--PLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAAR 528

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TV DARF KPLD  L+  LA+ HE +ITVEEGS+GGFG+ V+Q LAQ G LD  +K
Sbjct: 529 GLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLK 588

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            R L LPD + D   P    AQAGL    I     + +G
Sbjct: 589 IRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627


>gi|220926555|ref|YP_002501857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
           ORS 2060]
 gi|219951162|gb|ACL61554.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
           2060]
          Length = 665

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/648 (58%), Positives = 465/648 (71%), Gaps = 26/648 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD +  P  ++ L   +L+QLADELRA+ I  VS TGGHLG+ LGV+ELTVALHYVF 
Sbjct: 7   PLLDRVRDPADLRALPESDLRQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFT 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  HSSTSIS
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGR----------KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           AGLGMA+ RDL             + NVVAVIGDG+++AG AYEAMNNAG L S +IVIL
Sbjct: 127 AGLGMAIARDLAEAAARARGETPARRNVVAVIGDGSISAGMAYEAMNNAGALRSRLIVIL 186

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN  +S+         PPVGA+S+ L+RL S    R LR+ AK   + +   +++ AA+
Sbjct: 187 NDN-DMSI--------APPVGAMSAYLARLVSGDTYRSLRDTAKQFGRLLPKALYDTAAR 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +EYARG+++G G T+FEELG +Y+GP+DGHN+D L+ +L+ V++    GPVL+HVVT+K
Sbjct: 238 AEEYARGILAGGG-TMFEELGFHYVGPIDGHNLDHLLPVLKNVRDAPE-GPVLVHVVTQK 295

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE AAD+ H V KFD  +G+Q K+     SYT  F E+L+  A  D+ VVAI A
Sbjct: 296 GKGYAPAEAAADRGHAVVKFDVLSGQQVKAKPNAPSYTRVFGESLVKAAAADETVVAITA 355

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTG+++F +  P R FDVGIAEQHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVV
Sbjct: 356 AMPSGTGVDIFAKAHPERTFDVGIAEQHAVTFAAGLAAEGFRPFCAIYSTFLQRAYDQVV 415

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q LPVRFA+DRAGLVGADG TH G+FD+ ++ CLPN+ VMA +DEAEL HMVATA
Sbjct: 416 HDVAIQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNLTVMAAADEAELVHMVATA 475

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE--GERVALLGYGTAVQSCL 602
            A D  P   RYPRG G+GV+LP   +G  L +GKGR+L    G RVALL  GT +   L
Sbjct: 476 HAHDAGPIALRYPRGEGVGVDLP--ERGEVLAIGKGRVLRRPPGARVALLSLGTRLAEAL 533

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A+  LE +G+ +TVADARF KPLD ALI  LA SHEVL+T+EEGS GGFG+ V+  LA 
Sbjct: 534 KAADRLEESGIGVTVADARFAKPLDEALILDLAGSHEVLVTLEEGSTGGFGAMVLHLLAA 593

Query: 663 DGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            G LD GTV+ R L LPD Y DH SP    AQAGL    I  TV ++L
Sbjct: 594 RGALDAGTVRVRTLTLPDVYQDHDSPERMYAQAGLDAPAIVRTVTDLL 641


>gi|404254956|ref|ZP_10958924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26621]
          Length = 641

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/638 (57%), Positives = 448/638 (70%), Gaps = 18/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+N P  ++ L   EL+ LADELR + I  V  TGGHLGS LGV+ELTVA+HYVF
Sbjct: 7   TPLLDTVNVPADLRTLPATELRALADELRQETIAAVGVTGGHLGSGLGVVELTVAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 67  DTPRDRLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   +  +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S+ 
Sbjct: 127 SASLGFAIANKIADKPGKAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG LS+ LSR+ S+R     RE+AK + K++  P     +K DE+ARG+ 
Sbjct: 186 --------PPVGGLSAYLSRIVSSREFLGFRELAKRLAKKLPRPFASSLSKADEFARGL- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN++ L+ +LE V++ +  GP+L+HVVT+KG+GY  AE 
Sbjct: 237 -AMGGTLFEELGFYYVGPIDGHNLEQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGV KFD  +G Q K+      Y   F   L+ EAE D  + AI AAM  GTGL+
Sbjct: 295 AADKYHGVQKFDVISGVQTKAPPGPPQYQNVFGAQLLKEAESDPTICAITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 355 GFSKAFPDRFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMAPSDEAEL HM  TAA  D  P  
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAPSDEAELVHMTHTAALHDSGPIA 474

Query: 554 FRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
            RYPRGNG GV +P     +P  LE+GKGRI+ +G +VA++  GT +   L A+  LE+ 
Sbjct: 475 VRYPRGNGTGVAMPE----VPERLEIGKGRIVRQGHKVAIMALGTRLGEALKAADALEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  +HEV +T+EE S+GG G+HV+ F +  GL+D  +K
Sbjct: 531 GLSTTVADLRFAKPLDEELIRKLLTTHEVAVTIEESSVGGLGAHVLTFASDTGLIDAGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R L LPD + D   P  Q A+AGL    I  TV   L
Sbjct: 591 LRTLRLPDVFQDQDKPEAQYAEAGLDADAIVETVLKAL 628


>gi|349686274|ref|ZP_08897416.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           oboediens 174Bp2]
          Length = 631

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/629 (57%), Positives = 461/629 (73%), Gaps = 31/629 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 17  PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 197 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 247

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 248 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 305

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 306 HGYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAA 365

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F R +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 366 MPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 425

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ 
Sbjct: 426 DVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSI 485

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ELP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 486 AFDEGPIGLRYPRGGGLGLELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPR 543

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +   L A+ +L + GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+
Sbjct: 544 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 603

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGS 686
             LA+ GLLD  V++RP+ LPDR+IDH +
Sbjct: 604 THLAKTGLLD-RVRFRPMTLPDRFIDHNT 631


>gi|330991812|ref|ZP_08315761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
 gi|329760833|gb|EGG77328.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
          Length = 652

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/645 (56%), Positives = 465/645 (72%), Gaps = 31/645 (4%)

Query: 83  PIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILW 142
           P  ++NLS+ +L+QLADELR++ I  VS TGGHLG+SLGV+ELTVALH VF+ P DR++W
Sbjct: 4   PHDLRNLSVEQLRQLADELRSETIDAVSTTGGHLGASLGVVELTVALHAVFDTPDDRVIW 63

Query: 143 DVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG 202
           DVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV 
Sbjct: 64  DVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVA 123

Query: 203 RDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLP 253
             L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+ 
Sbjct: 124 HHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSIA 182

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+SS LSRL S+R    LRE+A  + K++ G +   A K DEYARG++
Sbjct: 183 --------PPVGAMSSYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIM 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE 
Sbjct: 235 TGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAES 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+
Sbjct: 293 AGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDKIVTITAAMPSGTGLD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+HDV LQKLP
Sbjct: 353 KFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ ++ CLP + +MAPS E EL HM ATA A D+ P  
Sbjct: 413 VRFAIDRAGLVGADGATHAGSFDIAYLGCLPGITLMAPSTEVELMHMTATAIAFDEGPIG 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAAS 605
            RYPRG G+G+ LP    G  LE+G+GRI+ E  R        +A+L  G  ++  L A+
Sbjct: 473 LRYPRGAGLGLALPAA--GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPRLEHALKAA 530

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
            +L ++GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGF S V+  LA+ GL
Sbjct: 531 DMLAAHGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASFVMTHLARTGL 590

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           LD  V++RP+ LPDR+IDH +   Q  +AGL  + I  T    LG
Sbjct: 591 LD-RVRFRPMTLPDRFIDHNTQDAQYIEAGLDAAAITNTALEALG 634


>gi|349688169|ref|ZP_08899311.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           oboediens 174Bp2]
          Length = 634

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/629 (57%), Positives = 461/629 (73%), Gaps = 31/629 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 20  PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 79

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 80  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 139

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 140 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 199

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 200 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 250

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YY+GPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 251 DEYARGIMTGG--TLFEELGFYYVGPVDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKG 308

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 309 HGYKPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQASTDDRIVTITAA 368

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F R +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 369 MPSGTGLDKFARAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 428

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ 
Sbjct: 429 DVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSI 488

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ELP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 489 AFDEGPIGLRYPRGGGLGLELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPR 546

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +   L A+ +L + GL  TVADARF KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+
Sbjct: 547 LADALKAADMLAAQGLSPTVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFGSYVM 606

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGS 686
             LA+ GLLD  V++RP+ LPDR+IDH +
Sbjct: 607 THLAKTGLLD-RVRFRPMTLPDRFIDHNT 634


>gi|341613385|ref|ZP_08700254.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium sp.
           JLT1363]
          Length = 632

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/642 (56%), Positives = 454/642 (70%), Gaps = 14/642 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +LDT+N P  ++ +   +L+QLADELR ++I  V  TGGHLGS LGV+ELTVA+HY+FN 
Sbjct: 1   MLDTVNLPADLRKIDRDKLRQLADELRTEMIDAVGTTGGHLGSGLGVVELTVAIHYIFNT 60

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSISA
Sbjct: 61  PEDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISA 120

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           G+G A+   L+ +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S+   
Sbjct: 121 GIGFAMANRLQDKPGRAIAVIGDGAMSAGMAYEAMNNAEQAGNRLVVILNDN-DMSIA-- 177

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVG LS+ L+R+ S+     LR +A  V K++   +H    K +E+ RGM++G
Sbjct: 178 ------PPVGGLSAYLARVVSSGEYLGLRSLASKVAKKMHRRIHSSLGKAEEFTRGMVTG 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEELG YY+GP+DGHN+D L+ +LE V+++   GPVLIHVVTEKG+GY +AE++A
Sbjct: 232 G--TLFEELGFYYVGPIDGHNLDHLIPVLENVRDSDQ-GPVLIHVVTEKGKGYKFAEESA 288

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DKYHGV+KFD  TG+Q KS     +Y   F E L   AE D  + AI AAM GGTG++ F
Sbjct: 289 DKYHGVSKFDVITGEQKKSKGGPPNYQNVFGETLAKLAETDTRICAITAAMPGGTGVDKF 348

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +  P R FDVGIAEQH VTFAAGLA +G++PF AIYS+F+QRAYDQVVHDV +Q LPVR
Sbjct: 349 AKAHPERSFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVR 408

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH GSFD+T++A LPN VVMA SDEAEL HM  TAA  D+ P  FR
Sbjct: 409 FAIDRAGLVGADGATHAGSFDITYLATLPNFVVMAASDEAELAHMTYTAAEYDEGPIAFR 468

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G GVE+P   K   LE+GKGRI+ EG +VA+L  GT +   L A+  LE+ GL  
Sbjct: 469 YPRGAGTGVEIP--EKLQKLEIGKGRIVKEGSKVAILSLGTRLGEALEAAEQLEARGLST 526

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVAD RF KPLD ALI    + HEV++T+EEG+IGG G+HV+ + +  GLLD  +K R +
Sbjct: 527 TVADMRFAKPLDTALIEKAMREHEVVLTIEEGAIGGIGAHVLTYASDSGLLDEGLKVRTM 586

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            LPD + D   P  Q  +AGL   HI  TV   L      +E
Sbjct: 587 RLPDIFQDQDDPKKQYDEAGLNAPHILDTVLAALRHNSAGVE 628


>gi|395491697|ref|ZP_10423276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26617]
          Length = 641

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/636 (57%), Positives = 447/636 (70%), Gaps = 14/636 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+N P  ++ L   EL+ LADELR + I  V  TGGHLGS LGV+ELTVA+HYVF
Sbjct: 7   TPLLDTVNVPADLRTLPATELRALADELRQETIAAVGVTGGHLGSGLGVVELTVAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 67  DTPRDRLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG A+   +  +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S+ 
Sbjct: 127 SASLGFAIANKIADKPGKAIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG LS+ LSR+ S+R     RE+AK + K++  P     +K DE+ARG+ 
Sbjct: 186 --------PPVGGLSAYLSRIVSSREFLGFRELAKRLAKKLPRPFASSLSKADEFARGL- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN++ L+ +LE V++ +  GP+L+HVVT+KG+GY  AE 
Sbjct: 237 -AMGGTLFEELGFYYVGPIDGHNLEQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGV KFD  +G Q K+      Y   F   L+ EAE D  + AI AAM  GTGL+
Sbjct: 295 AADKYHGVQKFDVISGVQTKAPPGPPQYQNVFGAQLLKEAESDPTICAITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 355 GFSKAFPDRFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDVT++A LPNMVVMAPSDEAEL HM  TAA  D  P  
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDVTYLATLPNMVVMAPSDEAELVHMTHTAALHDSGPIA 474

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG GV +P   +   LE+GKGRI+ +G +VA++  GT +   L A+  LE+ GL
Sbjct: 475 VRYPRGNGTGVAMPEVAE--RLEIGKGRIVRQGHKVAIMALGTRLGEALKAADALEAKGL 532

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVAD RF KPLD  LIR L  +HEV +T+EE S+GG G+HV+ F +  GL+D  +K R
Sbjct: 533 STTVADLRFAKPLDEELIRKLLTTHEVAVTIEESSVGGLGAHVLTFASDTGLIDAGLKLR 592

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            L LPD + D   P  Q A+AGL    I  TV   L
Sbjct: 593 TLRLPDVFQDQDKPEAQYAEAGLDADAIVETVLKAL 628


>gi|295688781|ref|YP_003592474.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
 gi|295430684|gb|ADG09856.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
          Length = 640

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/637 (58%), Positives = 453/637 (71%), Gaps = 14/637 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P   + LS+ ELKQLA E+RA+ I  VS TGGHLG+ LGV+ELTVALH+VF
Sbjct: 5   TPLLDTIASPADTRGLSVGELKQLAAEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
             PKD ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H++TSI
Sbjct: 65  ETPKDILIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAAHAATSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG    RD KG  N+VVAVIGDG++ AG AYEAMN A      +IVILNDN  +S+ 
Sbjct: 125 SAALGFCAARDAKGEDNSVVAVIGDGSLGAGMAYEAMNAATDTTKRLIVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG +S+ L+ L S    R +R++ K V +++  PM E A K +EYARGM+
Sbjct: 184 --------PPVGGMSAYLANLVSGGAYRSVRKLGKTVVEKLPSPMREAARKAEEYARGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G   T FEELG +Y+GP+DGH++D LV++L+  K      PVL+H VT+KG+GY  AE 
Sbjct: 236 TGG--TFFEELGFHYVGPIDGHDMDALVSVLKNAKAFADK-PVLVHCVTQKGKGYAPAEG 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           A DK H V KFD  TG+Q KS+    SYT  FA+ LI +AE D  +VAI AAM  GTGL+
Sbjct: 293 ADDKLHAVVKFDVVTGQQQKSAGGPPSYTKVFAQELIKQAEKDDKIVAITAAMPSGTGLD 352

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           LF + FP R FDVGIAEQHAVTFAAGLA +G+KPF AIYS+F+QR YDQVVHDV +Q LP
Sbjct: 353 LFGKAFPDRTFDVGIAEQHAVTFAAGLAADGMKPFTAIYSTFLQRGYDQVVHDVAIQGLP 412

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFAMDRAGLVGADGPTH GSFD+ FM  LP MV+MA +DE EL  MVATAAAIDDRPS 
Sbjct: 413 VRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAAIDDRPSA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G+G+E+P      PLE+GKGRI+ EG  VA++ +GT +   L A+ LL + GL
Sbjct: 473 FRYPRGEGLGLEIPANVD--PLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGL 530

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TV DARF KPLD  L+  LA+ HE ++TVEEGS+GGFG+ V+Q LAQ G LD  +K R
Sbjct: 531 SATVCDARFAKPLDLDLLLRLAREHEAIVTVEEGSMGGFGAFVLQALAQHGALDRGLKIR 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            L LPD + D   P    AQAGL    +     + LG
Sbjct: 591 TLCLPDVFQDQDKPDAMYAQAGLDAEGVLRGALSALG 627


>gi|254460223|ref|ZP_05073639.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676812|gb|EDZ41299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 624

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/622 (58%), Positives = 456/622 (73%), Gaps = 14/622 (2%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           MK LS  EL+ LA ELR++V+  VS+TGGHLGSSLGV+ELTVALH VF+ P+D+++WDVG
Sbjct: 1   MKGLSNSELETLAHELRSEVVEAVSETGGHLGSSLGVVELTVALHAVFDTPRDKLIWDVG 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQ YPHK+LTGRR++M T+RQ  GLSGFTKR+ESE+D FG  HSSTSISA LG  + RD+
Sbjct: 61  HQCYPHKVLTGRRERMKTLRQEGGLSGFTKRAESEFDPFGAAHSSTSISAALGFTIARDM 120

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVG 265
                + VA+IGDG+++AG AYEA+NNAG     M VILNDN ++S+         PPVG
Sbjct: 121 GLPTGDAVAIIGDGSISAGMAYEALNNAGAEGRRMFVILNDN-EMSIA--------PPVG 171

Query: 266 ALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELG 325
           A+S  LS L ++ PL EL+ +A+G    + GP+ + A +  +   G ++ +G T+FE+LG
Sbjct: 172 AMSKYLSGLYAS-PLGELQTIAEGFEAALPGPLRDHARRARQLVTG-VADAGGTMFEDLG 229

Query: 326 LYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFD 385
             Y+GPVDGH++D L+++L   + T++TGPVLIH  T KG+GY  AE++ADKYHGVAKFD
Sbjct: 230 FQYVGPVDGHDMDQLLSVLRAAR-TRSTGPVLIHCCTVKGKGYAPAEQSADKYHGVAKFD 288

Query: 386 PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFD 445
            +TG Q KS     SYT+ F +AL   AE D  +V I AAM  GTG+++F   FP R FD
Sbjct: 289 VSTGVQSKSRPNAPSYTSVFGKALSKLAEADPKIVGITAAMPSGTGMDIFADHFPKRMFD 348

Query: 446 VGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVG 505
           VGIAEQH VTFAAG+A  GLKPFCAIYSSF+QR YDQ+VHDV LQ LPVRFA+DRAGLVG
Sbjct: 349 VGIAEQHGVTFAAGMAAGGLKPFCAIYSSFLQRGYDQIVHDVALQNLPVRFAIDRAGLVG 408

Query: 506 ADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE 565
           ADGPTH G+FDV +++ LPNM VMA SDEAEL HMVATAAA D  P  FRYPRG+G GVE
Sbjct: 409 ADGPTHAGAFDVGYLSALPNMTVMAASDEAELVHMVATAAAHDSGPIAFRYPRGSGTGVE 468

Query: 566 LPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 625
           +P    G  LE+GKGRI+ EG  VA+L +G  +   L A+ L+E+ G+  TVADARF KP
Sbjct: 469 IP--EIGEVLEIGKGRIVREGADVAILSFGAHLSESLKAADLMEAQGVSATVADARFAKP 526

Query: 626 LDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 685
           LDHALIR L K+H+ LIT+E+GS GGFG+ V+ +LA +GLLDG +  R + LPDR+ID  
Sbjct: 527 LDHALIRKLVKTHKALITIEQGSQGGFGAMVLHYLAGEGLLDGDLAIRTMTLPDRFIDQA 586

Query: 686 SPADQLAQAGLTPSHIAATVFN 707
           +P    A AGLT + IAAT   
Sbjct: 587 APDAMYADAGLTATDIAATALQ 608


>gi|340779464|ref|ZP_08699407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter aceti NBRC
           14818]
          Length = 645

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/653 (56%), Positives = 465/653 (71%), Gaps = 32/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD +++P+ ++NLSI +LKQ+ADELR++ +  VS TGGHLG+SLGV+ELTVA+H VF+
Sbjct: 8   PLLDRVSHPVDLRNLSIDQLKQVADELRSETVETVSTTGGHLGASLGVVELTVAIHAVFD 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKI+TGRRD++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 68  TPDDRLIWDVGHQAYPHKIITGRRDRIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 127

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA   G     +IVILN
Sbjct: 128 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNAAVAGEGAERLIVILN 187

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVG++S+ LSRL S+R    LR++A    K++   +   A K 
Sbjct: 188 DN-EMSIA--------PPVGSMSNYLSRLMSSRQFMGLRDLAGKFVKKLPNRLERTAKKA 238

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYARGMI+G   TLFEELG YY+GPVDGH++  LV IL  +++T   GP+L+HV+TEKG
Sbjct: 239 EEYARGMITGG--TLFEELGFYYVGPVDGHDMTQLVPILRNLRDTDQ-GPILLHVITEKG 295

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH VAKF+  TG+Q K+     S+T  FA  LI  A  D  + AI AA
Sbjct: 296 HGYKPAEAAGDKYHAVAKFNVVTGEQKKAPPGPPSWTNIFARELIDRASTDNRIAAITAA 355

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F  +FP R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 356 MPSGTGLDKFATKFPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 415

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH GSFD+ ++ CLP M +MAPSDE EL +M ATA 
Sbjct: 416 DVVLQKLPVRFAIDRAGLVGADGATHAGSFDIAYLGCLPGMTIMAPSDEIELLNMTATAC 475

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-GER-------VALLGYGTA 597
             D+ P   RYPRGN  G+ELP   KG  +++GKGRI+ E G++       +A+L  G  
Sbjct: 476 EFDEGPIALRYPRGNTYGLELPA--KGEIIQIGKGRIVREMGQQSGREKGGIAILSLGPR 533

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +Q  L A+  L ++GL  TVADARF KPLD  L+  LA+ H VLIT+EEGS+GGFGS V 
Sbjct: 534 LQEVLKAADQLAAHGLPPTVADARFAKPLDTQLVEQLARDHAVLITIEEGSVGGFGSFVA 593

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           Q L++ GLLD  V+ R + LPD +IDH S  +Q   A L   +I  T  N LG
Sbjct: 594 QHLSKTGLLD-NVRLRTMTLPDMFIDHDSQFEQYNVAHLNAPYIVKTALNALG 645


>gi|397623997|gb|EJK67229.1| hypothetical protein THAOC_11764 [Thalassiosira oceanica]
          Length = 752

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/719 (51%), Positives = 485/719 (67%), Gaps = 55/719 (7%)

Query: 53  RPN--GVCASLSERGEYHSQRP-PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNV 109
           RP   G  A LSE     + RP   P+LD++ +P  MK L +REL+QLA ELR +VI +V
Sbjct: 30  RPQHAGRGAVLSESAAADADRPLSKPILDSVTFPHDMKRLDMRELQQLAHELRWEVIESV 89

Query: 110 SKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDG 169
           S+TGGH  SSLGVIELT+ALHYVF+ P+D I+WDV HQ YPHK+LTGRRD+  T+RQ DG
Sbjct: 90  SQTGGHFSSSLGVIELTIALHYVFDMPEDDIIWDVAHQCYPHKMLTGRRDRFPTLRQLDG 149

Query: 170 LSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-KGRKNNVVAVIGDGAMTAGQAYE 228
           +SGF KR ESEYD FG GHSSTSISA  GM+V + L + R+NN +AVIGDGA+T G AYE
Sbjct: 150 MSGFCKRKESEYDSFGAGHSSTSISAAQGMSVAKSLLQKRRNNCIAVIGDGAITGGMAYE 209

Query: 229 AMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNRPLRELREVA 287
           AMN+AGYL S MIV+LNDN QVSLPT T   G + P   LS+  S L  ++P ++ R+ A
Sbjct: 210 AMNSAGYLTSRMIVVLNDNGQVSLPTGTQSAGGVKPASQLSAYTSNLLVSKPFQDFRDFA 269

Query: 288 KGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEV 347
           K + K     + ++  ++DEYARG+++G   TLFEELG +Y+GP+DGH+++++V ILE++
Sbjct: 270 KSLNKLFPENVQDVNKRIDEYARGVVTGG--TLFEELGFFYVGPIDGHDLENMVPILEKL 327

Query: 348 KNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAE 407
           +++ +  PVL+H+ T KG GY  A KA+D+ HGV KFD  TG QFK  A   S+T+ FA 
Sbjct: 328 RDSDSNKPVLLHLKTTKGYGYEPALKASDRMHGVGKFDIKTGIQFKGKAAAPSFTSIFAN 387

Query: 408 ALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKP 467
           ALI  A   +++V I AAM GGTG+++F RRFP R FDVGIAEQHAVTFAAG+ACEGLKP
Sbjct: 388 ALIDAATEHREIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTFAAGMACEGLKP 447

Query: 468 FCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMV 527
           FC IYS+FMQR YDQVVHDV +Q LPVR  +DRAG+VG DGPTH G +D+ +M C+PN+ 
Sbjct: 448 FCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYMGCIPNLT 507

Query: 528 VMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG---------IGVELPPG---NKGIPL 575
           +M+PSDE EL +MVATAA  D+ P   RYPRG G          G +L  G    KG+ +
Sbjct: 508 IMSPSDEIELRNMVATAADFDEGPIVLRYPRGVGYAADKLQTLFGYDLQDGEVPTKGVAI 567

Query: 576 EVGKGRILIE----------------------------GE----RVALLGYGTAVQSCLA 603
           E+GKGRI+ E                            GE    RVA+L  G+ +   L 
Sbjct: 568 EIGKGRIIREPGGIRTLSKPEAVPANGSTDSTIGAGSRGETRESRVAILSIGSRLSEALI 627

Query: 604 ASALLESN--GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA 661
           A+  LE +   L +TVADARF KPLD  L+ SLA  + V++TVEEGS+GGFG HV+ FL+
Sbjct: 628 AADELEESYPNLAVTVADARFMKPLDKDLVLSLAADNGVIVTVEEGSVGGFGDHVLHFLS 687

Query: 662 QDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 719
            +G LD G +++RP+V+PD Y +  +  +Q   AGL   HI   V   L +T    E++
Sbjct: 688 HEGALDSGDLRFRPMVMPDTYFETATQYEQYEMAGLNARHIRDQVAK-LAKTSAGAEVV 745


>gi|149202070|ref|ZP_01879043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
 gi|149144168|gb|EDM32199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
          Length = 661

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/653 (56%), Positives = 461/653 (70%), Gaps = 15/653 (2%)

Query: 53  RPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKT 112
           R  G+ A+  E    H+ RP TPLLD I  P  ++ +  R+L  LADELRA+VI  VS+T
Sbjct: 7   RAGGISATGEEAAMTHT-RPNTPLLDRIAGPSDLRQMPDRQLAALADELRAEVISAVSET 65

Query: 113 GGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSG 172
           GGHLGSSLGV+ELTVA+H VF+ P D+++WDVGHQ YPHKILTGRRD++ T+RQ DGLSG
Sbjct: 66  GGHLGSSLGVVELTVAIHAVFSTPMDKLIWDVGHQCYPHKILTGRRDRIRTLRQKDGLSG 125

Query: 173 FTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNN 232
           FTKRSES YD FG  HSSTSISA LG AVGRD+     + +AVIGDG+++AG AYEA+NN
Sbjct: 126 FTKRSESIYDPFGAAHSSTSISAALGFAVGRDMGQATGDAIAVIGDGSISAGMAYEALNN 185

Query: 233 AGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK 292
           AG     + VILNDN ++S+         PPVGA+SS LSR+ ++ PL  +  +A+G   
Sbjct: 186 AGAEGRRLFVILNDN-EMSIA--------PPVGAMSSYLSRMYASEPLARMASLAEGFEA 236

Query: 293 QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKT 352
            +  P+ E A +  +   G+ +GSG TLFEELG  Y+GP+DGH++  L+++L   + T+ 
Sbjct: 237 ALPTPLRESAKRARQLVTGL-TGSG-TLFEELGFQYVGPIDGHDMGQLLSVLRAAR-TRA 293

Query: 353 TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAE 412
           TGPVLIHV T KG+GY  AE AADK HGV+KFDPATG Q KS     SYT  F +AL+ E
Sbjct: 294 TGPVLIHVCTVKGKGYAPAEGAADKGHGVSKFDPATGAQAKSKPGAPSYTGVFGQALVDE 353

Query: 413 AEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIY 472
           A  D  +VA+ AAM  GTGL     RFP R FDVGIAEQHAVTFAAG+A  GLKPFC IY
Sbjct: 354 AARDDRIVAVTAAMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAAGMAASGLKPFCTIY 413

Query: 473 SSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPS 532
           S+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++  LP M +MA +
Sbjct: 414 STFLQRAYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIGYLGNLPGMTLMAAA 473

Query: 533 DEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALL 592
           DEAEL HMVATAAA D  P  FRYPRG+G GV LP   +G PL +GKGR++ EG  VA+L
Sbjct: 474 DEAELVHMVATAAAHDAGPIAFRYPRGSGTGVALP--ERGKPLAIGKGRVIEEGTDVAIL 531

Query: 593 GYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGF 652
            +G  +  C  A+ ++  +G+ +TVADARF KPLD  L+  L   H  LITVE+G++GGF
Sbjct: 532 SFGAHLFECQVAADMVADDGITVTVADARFAKPLDTDLLMQLVGHHRALITVEQGAMGGF 591

Query: 653 GSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           GS V+  LA+ G  D  +  R L LPDR+ID   PAD  A AGL+ + IA ++
Sbjct: 592 GSMVLHELARRGAFDKGLILRTLCLPDRFIDQADPADMYADAGLSATDIAHSI 644


>gi|254466411|ref|ZP_05079822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           Y4I]
 gi|206687319|gb|EDZ47801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           Y4I]
          Length = 642

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/644 (56%), Positives = 454/644 (70%), Gaps = 18/644 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I  P  +K L+  +L Q+A ELR + I  VS TGGHLG+ LGV+ELT ALH
Sbjct: 4   RPNTPLLDQITRPADLKGLTDAQLVQVAHELRQETISAVSVTGGHLGAGLGVVELTTALH 63

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VF+ P+D+++WDV HQ YPHKILTGRRD++ T+R  DGLSGFTKRSES YD FG  HSS
Sbjct: 64  AVFDTPRDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHSS 123

Query: 191 TSISAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           TSISA LG AV RDL G       + +AVIGDG+M+AG A+EAMNNAG+L   + VILND
Sbjct: 124 TSISAALGFAVARDLGGVIPEGNGDAIAVIGDGSMSAGMAFEAMNNAGHLGKRLFVILND 183

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N ++S+         PPVGALSS LSRL +  P +EL+  AKG    +  P  E A +  
Sbjct: 184 N-EMSI--------APPVGALSSYLSRLYAGEPFQELKAAAKGAVSLLPEPFREGAKRAK 234

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           +  +GM    G TLFE LG  Y+GP+DGH+++ L+ +L  VK  + TGP+LIHV+T+KG+
Sbjct: 235 DMLKGM--AVGGTLFEALGFSYLGPIDGHDLNQLLPVLRTVK-ARATGPILIHVLTKKGK 291

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GY  AE+A DK H  AKFD  TG+Q K+ +   SYT+ F   L+  A  D  + A+ AAM
Sbjct: 292 GYGPAERARDKGHATAKFDMVTGEQKKAPSNAPSYTSVFGNELVKLAAKDDKICAVTAAM 351

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             GTGL+L   R+P+RCFDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVVHD
Sbjct: 352 PDGTGLSLMAERYPSRCFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHD 411

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V +Q+LPVRFA+DRAGLVGADG TH GSFD+ FMA LP MVVMA +DEAEL HMVATAAA
Sbjct: 412 VAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELVHMVATAAA 471

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            +D P  FRYPRG G GVE+P   +   LE+GKGR++  G+RVALL +GT +     A+ 
Sbjct: 472 HNDGPIAFRYPRGEGEGVEMPETPE--VLEIGKGRMIQAGKRVALLSFGTRLGEVKKAAE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL 666
            L + G++ T+ADARF KPLD  LI  LA  HE LIT+EEG++GGFGSHV Q LA++G+ 
Sbjct: 530 ALAAKGIKPTIADARFAKPLDRDLILQLAADHEALITIEEGAVGGFGSHVAQLLAEEGVF 589

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           D  +K+R +VLPD +ID  SPAD    A +    I A V ++LG
Sbjct: 590 DSGLKYRSMVLPDTFIDQASPADMYEVAAMNAPQIEAKVLDVLG 633


>gi|349700302|ref|ZP_08901931.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 630

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/635 (57%), Positives = 462/635 (72%), Gaps = 31/635 (4%)

Query: 93  ELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHK 152
           +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+ P DR++WDVGHQ YPHK
Sbjct: 2   QLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFDTPDDRVIWDVGHQAYPHK 61

Query: 153 ILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG----- 207
           ILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+      
Sbjct: 62  ILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPS 121

Query: 208 -RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPP 263
            R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PP
Sbjct: 122 YRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSIA--------PP 172

Query: 264 VGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEE 323
           VGA+S+ LSRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEE
Sbjct: 173 VGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEE 230

Query: 324 LGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAK 383
           LG YYIGPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+K
Sbjct: 231 LGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSK 290

Query: 384 FDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRC 443
           F+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R 
Sbjct: 291 FNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRF 350

Query: 444 FDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGL 503
           FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGL
Sbjct: 351 FDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGL 410

Query: 504 VGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIG 563
           VGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G
Sbjct: 411 VGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAGLG 470

Query: 564 VELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRL 615
           +ELP    G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L + GL  
Sbjct: 471 LELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLSP 528

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KP+D AL+  LA++H VLIT+EEGS+GGF S+V+  LA+ GLLD  V++RP+
Sbjct: 529 TVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASYVMTHLAKTGLLD-RVRFRPM 587

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LPDR+IDH + A Q  +AGL    I AT  + LG
Sbjct: 588 TLPDRFIDHNTQAAQYHEAGLDAPAIVATALSALG 622


>gi|429768590|ref|ZP_19300736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           470-4]
 gi|429189010|gb|EKY29868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           470-4]
          Length = 636

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/640 (57%), Positives = 454/640 (70%), Gaps = 15/640 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TPLLDT+ +P   +   I +LKQLA+E+RA+ I  VS TGGHLG+ LGV+ELTVALH+
Sbjct: 2   PNTPLLDTVKFPADTRGFDIPQLKQLAEEVRAETIDAVSVTGGHLGAGLGVVELTVALHH 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF  P+D ++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  H+ST
Sbjct: 62  VFETPQDILIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHAST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQV 250
           SISA LG A  RD KG  N VVAVIGDG+M+AG AYEAMNNA    S  ++VILNDN  +
Sbjct: 122 SISAALGFAAARDAKGGNNRVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVILNDN-DM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVG +S+ L++  S    + +R+V K     +  P  + A K +EYAR
Sbjct: 181 SIA--------PPVGGMSAYLAKQVSGGTYQNIRKVGKKFVDHMPRPFRDAARKAEEYAR 232

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GMI G   TLFEELG YY+GP+DGH++++LV IL+      T  PVL+HVVT+KG+GY  
Sbjct: 233 GMIVGG--TLFEELGFYYVGPIDGHDMENLVPILKNAAAI-TDRPVLVHVVTQKGKGYAP 289

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE +ADK H V KFD  +GKQ K+ +   SYT  F   LI  A+ D  V+A+ AAM  GT
Sbjct: 290 AESSADKLHAVVKFDVVSGKQAKAISNAPSYTKVFGTELIKHAQADPTVMAVTAAMPSGT 349

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+LF + FP R FDVGIAEQHAVTFAAGLA +G+KP CAIYS+F+QR YDQVVHDV +Q
Sbjct: 350 GLDLFGQAFPDRTFDVGIAEQHAVTFAAGLAADGMKPVCAIYSTFLQRGYDQVVHDVAIQ 409

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFAMDRAGLVGADG TH GSFD+ +M  LP MV+MA +DEAEL  M++T+ AIDDR
Sbjct: 410 SLPVRFAMDRAGLVGADGATHAGSFDIGYMGALPGMVLMAAADEAELAAMISTSLAIDDR 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           PS FRYPRG G+GV++P      PLE+GKGRI+ EG  VA+L  GT +Q  L A+ +L +
Sbjct: 470 PSAFRYPRGEGVGVDIP--ELAAPLEIGKGRIVREGTSVAILSLGTRLQESLKAADMLAA 527

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            G+  TVADARF KPLD  LI  LA+ HE LITVEEG++GGFG+ V+Q LA+ G LD  +
Sbjct: 528 KGVSATVADARFAKPLDADLILRLAREHEALITVEEGAMGGFGAFVLQLLAKKGALDAGL 587

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           K R L LPD + D   P    AQAGL   HIAA     LG
Sbjct: 588 KIRTLHLPDIFQDQDKPEVMYAQAGLNAEHIAAAAVTALG 627


>gi|114765816|ref|ZP_01444909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelagibaca bermudensis
           HTCC2601]
 gi|114541815|gb|EAU44852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. HTCC2601]
          Length = 641

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/646 (56%), Positives = 454/646 (70%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S  P TPLLD ++ P  +K  S  EL+Q+A ELR + I  VS+TGGHLG+ LGVIELTVA
Sbjct: 2   SDSPQTPLLDRVSSPADLKRFSDAELEQVAHELRDETIAAVSETGGHLGAGLGVIELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+++WDV HQ YPHKILTGRRD++ T+R+  GLSGFTKRSES YD FG GH
Sbjct: 62  LHAVFDTPRDKVIWDVSHQAYPHKILTGRRDRIRTLRKKGGLSGFTKRSESPYDPFGAGH 121

Query: 189 SSTSISAGLGMAVGRDLKG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG AV RDL G       + +AVIGDGAM+AG AYEAMNNAG+L   +IVIL
Sbjct: 122 SSTSISAALGFAVARDLGGVCDTGAGDAIAVIGDGAMSAGMAYEAMNNAGHLGKRLIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PP GA+SS LSRL +  P ++L+  AKG    +  P  E A +
Sbjct: 182 NDN-EMSI--------APPTGAMSSYLSRLYAEEPFQDLKAAAKGAVSLLPPPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             E  +GM  G   TLFEELG  Y+GP+DGH++  L+ +L  V+  +   P+L+HV+T+K
Sbjct: 233 AKEMLKGMTVGG--TLFEELGFDYLGPLDGHDLHQLLPVLRMVR-ARANKPILLHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE++AD+ H  AKFD ATG+Q K+ +   +YT  FA+ L   A  D  + A+ A
Sbjct: 290 GKGYGPAEESADRGHARAKFDVATGEQKKAPSNAPAYTKVFAKELTRLAAEDSRICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+L   R+P+R FDVGIAEQH VTFAAGLA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLDLMAERYPSRVFDVGIAEQHGVTFAAGLAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH G++D+ FMA LP MVVMA +DEAEL HMVATA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGAYDIAFMANLPGMVVMAAADEAELKHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D+ P  FRYPRG G GVE+P    G  LE+G+GRI+ EG+RVALL +GT +     A
Sbjct: 470 AAHDEGPIAFRYPRGEGEGVEMP--EAGEILEIGRGRIVSEGKRVALLSFGTRLGEVRKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
              L + G+  TVADARF KPLD  L   LA  HE LIT+EEGS+GGFGSHV Q L+ +G
Sbjct: 528 CEKLSARGITPTVADARFAKPLDRDLTLRLAAEHEALITIEEGSVGGFGSHVAQLLSDEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D  +K+R +VLPD +IDH SP D    AGL   HI   V   LG
Sbjct: 588 VFDHGLKFRSMVLPDTFIDHASPDDMYESAGLDARHIEEKVLTTLG 633


>gi|114326885|ref|YP_744042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315059|gb|ABI61119.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 674

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/658 (56%), Positives = 473/658 (71%), Gaps = 33/658 (5%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP LD + YP  ++N+S  +L+ +ADELRA+ +  VS TGGHLG++LGVIELTVA+H VF
Sbjct: 18  TPTLDRVRYPSDLRNMSSEQLRAVADELRAETVDAVSVTGGHLGAALGVIELTVAIHAVF 77

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG GHSSTSI
Sbjct: 78  DTPSDRLIWDVGHQAYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSI 137

Query: 194 SAGLGMAVGRDLK-------GRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           SAGLGMAV RDL+           +V+AVIGDGAM+AG  YEAMNNAG L S ++VILND
Sbjct: 138 SAGLGMAVARDLRRAAGEVGAGPEHVIAVIGDGAMSAGMVYEAMNNAGSLKSRLVVILND 197

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           N  +S+         PPVGA+S+ LSRL S+R    LR++A  + +     +   A + +
Sbjct: 198 N-DMSIA--------PPVGAMSAYLSRLLSSRSFLNLRDLAGKMARHFPRGIERTARRAE 248

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
           EYARG+++G   TLFEELG YY+GP+DGHN+D L+ +L  V++ + TGP+L+H +T KG 
Sbjct: 249 EYARGILTGG--TLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAEETGPILVHAITRKGH 306

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFK------SSARTQSYTTYFAEALIAEAEVDKDVV 420
           GY  AE +ADKYH V++F+  TG+Q K      +     +YT  FAEALIA AE +  VV
Sbjct: 307 GYAPAEASADKYHAVSRFNVVTGEQIKPAPVPGAKPAPPTYTKVFAEALIAAAEENPRVV 366

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AI+AAM  GTGL+ F +RFP RCFDVGIAEQHAVTFAAGLA EG+ PFCA+YS+F+QR Y
Sbjct: 367 AINAAMPSGTGLDAFEKRFPDRCFDVGIAEQHAVTFAAGLAVEGMVPFCALYSTFLQRGY 426

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ ++ CLP M++M+PSDEAEL H 
Sbjct: 427 DQLVHDVAIQHLPVRFAIDRAGLVGADGATHAGSFDMAYLGCLPGMMIMSPSDEAELVHA 486

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI----PLEVGKGRILIEGER-VALLGYG 595
           VAT AA D  PS  RYPRG G+GV LP   KG      L +G+GRI+ EG   +A+L  G
Sbjct: 487 VATVAAYDSGPSAVRYPRGEGVGVALPRDEKGRLRGDVLPIGRGRIVREGRSGIAILSIG 546

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
           T +Q  L A+  L ++GL +TVAD RF KPLD AL+  LA+ ++VL+ VEEGSIGG+ SH
Sbjct: 547 TRLQDALLAADDLAAHGLTVTVADGRFVKPLDTALVERLARENDVLVVVEEGSIGGYASH 606

Query: 656 VVQFLAQDGLLDG----TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           V+Q LAQ GLLD      +K R ++LPDRYIDH +  +Q+ QAGL    I  TV  ++
Sbjct: 607 VMQHLAQAGLLDARDGHALKLRSMILPDRYIDHDTQPNQIRQAGLDHQAIRDTVLKLV 664


>gi|170744395|ref|YP_001773050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
 gi|168198669|gb|ACA20616.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
          Length = 654

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/648 (57%), Positives = 460/648 (70%), Gaps = 26/648 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD +  P  ++ L   +L QLA ELRA+ I  VS TGGHLG+ LGV+ELTVALHYVF+
Sbjct: 7   PLLDRVRDPSELRALPESDLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFH 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  HSSTSIS
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 195 AGLGMAVGRDLKG----------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           AGLGMAV RDL             + NVVAVIGDG+++AG AYEAMNNAG L S ++VIL
Sbjct: 127 AGLGMAVARDLAEAAARARGETPERRNVVAVIGDGSISAGMAYEAMNNAGALRSRLVVIL 186

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN              PPVGA+S+ L+RL S    R LR+ A+   + +   +++ A +
Sbjct: 187 NDNDM---------SIAPPVGAMSAYLARLVSGDTYRSLRDTARQFGRLLPKALYDTAVR 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +EYARG+++G G T+FEELG +Y+GP+DGHN+D L+ IL+ V++    GPVL+HVVT+K
Sbjct: 238 AEEYARGILAGGG-TMFEELGFHYVGPIDGHNLDHLLPILKNVRDAPE-GPVLVHVVTQK 295

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE AAD+ H V KFD  +G+Q K+ A   +YT  F E+L+  A+ D  VVAI A
Sbjct: 296 GKGYAPAEAAADRGHAVVKFDVVSGQQVKAKANAPTYTRVFGESLVKAADADDKVVAITA 355

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTG++LF +  P R FDVGIAEQHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVV
Sbjct: 356 AMPSGTGVDLFAKAHPGRTFDVGIAEQHAVTFAAGLAAEGYRPFCAIYSTFLQRAYDQVV 415

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++ CLPNMVVMA +DEAEL HMVATA
Sbjct: 416 HDVALQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNMVVMAAADEAELVHMVATA 475

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQSCL 602
            A D  P  FRYPRG G+GV+LP   KG  L +G+GR++   EG RVAL+  GT +   L
Sbjct: 476 HAHDAGPIAFRYPRGEGVGVDLP--EKGEVLALGRGRVIRRPEGARVALVSLGTRLAEAL 533

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A+  LE  G+ +TVADARF KPLD  L+  LA SHEVL+TVEEGS GGFG+ V+  LA 
Sbjct: 534 KAAEQLEERGIGVTVADARFAKPLDEGLLLDLAGSHEVLVTVEEGSTGGFGAMVLHLLAG 593

Query: 663 DGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            G LD GTV+ R L LPD Y DH +P    AQAGL    I   V + L
Sbjct: 594 RGALDAGTVRVRTLTLPDSYQDHDTPERMYAQAGLDAPAIVRAVEHAL 641


>gi|126734148|ref|ZP_01749895.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
           CCS2]
 gi|126717014|gb|EBA13878.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
           CCS2]
          Length = 640

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/650 (55%), Positives = 457/650 (70%), Gaps = 13/650 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           + RP TP LD+I  P  ++ ++   +  LAD++RA+VI  VS+TGGHLGSSLGV+ELT A
Sbjct: 2   TNRPHTPFLDSIAGPADIRRMNDTAIANLADDVRAEVISAVSETGGHLGSSLGVVELTTA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +H VF+ P+D++++DVGHQ YPHK+LTGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H
Sbjct: 62  IHAVFDTPRDKVVFDVGHQCYPHKVLTGRRDRIRTLRQEGGLSGFTKRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG  VGRD+     + +AVIGDG+++AG AYEA+NNAG     + VILNDN 
Sbjct: 122 SSTSISAALGFTVGRDMGMPTGDAIAVIGDGSISAGMAYEALNNAGAEGRRLFVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGA+S  LS L ++ P+ EL ++A+G    + GP+ + A +    
Sbjct: 181 EMSIA--------PPVGAMSKYLSGLYAS-PMGELHKMAEGFEAALPGPLRDHARRARSL 231

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
             GM +G   TLFEELG  Y+GP+DGH++  L+ +L   + T+ TGPVLIHV T KG+GY
Sbjct: 232 VTGMQTGGSGTLFEELGFSYVGPIDGHDMTQLLPVLRAAR-TRATGPVLIHVCTTKGKGY 290

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE +AD  HGV+KFD ATG Q KS     SYT  F  AL  EA+ D  +VA+ AAM  
Sbjct: 291 APAEDSADCGHGVSKFDLATGAQAKSKPNAPSYTKVFGSALTTEAQADPSIVAVTAAMPS 350

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG+++   RF  R FDVGIAEQH VTFAAG+A  GLKPFCAIYS+F+QR YDQVVHDV 
Sbjct: 351 GTGVDIMGARFKDRVFDVGIAEQHGVTFAAGMAASGLKPFCAIYSTFLQRGYDQVVHDVA 410

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRFA+DRAGLVGADGPTH G+FD+ +M+ LPNMVVMA  DE EL HMV TAAA D
Sbjct: 411 LQNLPVRFAIDRAGLVGADGPTHAGAFDIGYMSALPNMVVMAAGDELELMHMVRTAAAYD 470

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P  FRYPRG G G++LP   +G  +E+GKGRI+ EG  VA+L +G  +  C  A+  L
Sbjct: 471 DGPIAFRYPRGEGEGIDLP--ERGELIEIGKGRIVQEGSDVAILSFGAHLAECRKAAEKL 528

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
            + G+  T+ADARF KPLD ALIR L ++H+ LITVE+GS GGFG+ V+  LA DGLLDG
Sbjct: 529 AAQGVSTTIADARFAKPLDRALIRQLLRNHKALITVEQGSRGGFGAMVLHDLANDGLLDG 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
             + R + LPDRYIDH SP    A AGLT   +AAT     G   + +E+
Sbjct: 589 CCQVRTMTLPDRYIDHASPDAMYADAGLTAVDVAATAMQAAGIEVKRVEV 638


>gi|349700981|ref|ZP_08902610.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 640

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/635 (56%), Positives = 460/635 (72%), Gaps = 31/635 (4%)

Query: 93  ELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHK 152
           +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+ P DR++WDVGHQ YPHK
Sbjct: 2   QLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFDTPDDRVIWDVGHQAYPHK 61

Query: 153 ILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG----- 207
           ILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+      
Sbjct: 62  ILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPS 121

Query: 208 -RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPP 263
            R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PP
Sbjct: 122 YRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSIA--------PP 172

Query: 264 VGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEE 323
           VGA+S+ LSRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEE
Sbjct: 173 VGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEE 230

Query: 324 LGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAK 383
           LG YYIGPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+K
Sbjct: 231 LGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSK 290

Query: 384 FDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRC 443
           F+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R 
Sbjct: 291 FNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRF 350

Query: 444 FDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGL 503
           FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGL
Sbjct: 351 FDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGL 410

Query: 504 VGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIG 563
           VGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G
Sbjct: 411 VGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAGLG 470

Query: 564 VELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRL 615
           +ELP    G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L + GL  
Sbjct: 471 LELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLSP 528

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KP+D AL+  LA++H VLIT+EEGS+GGF S+V+  LA+ GLLD  V++RP+
Sbjct: 529 TVADARFAKPIDTALVEQLARNHAVLITIEEGSVGGFASYVMTHLAKTGLLD-RVRFRPM 587

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            LPDR+IDH + A Q  +AGL    I  T    LG
Sbjct: 588 TLPDRFIDHNTQAAQYHEAGLDAVAITNTALEALG 622


>gi|61653206|gb|AAX48160.1| deoxyxylulose-5-phosphate synthase [uncultured proteobacterium
           DelRiverFos13D03]
          Length = 631

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/642 (57%), Positives = 458/642 (71%), Gaps = 14/642 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD ++ P  +K +S  EL +LADE+RA+VI  VSKTGGHLGSSLGV+ELTVA+H VF+A
Sbjct: 3   LLDKVSSPADLKAMSDAELGRLADEVRAEVISVVSKTGGHLGSSLGVVELTVAIHAVFDA 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+++WDVGHQ YPHKILTGRRD+MH++RQ  G+SGFTKRSES YD FG  HSSTSISA
Sbjct: 63  PVDKLIWDVGHQCYPHKILTGRRDRMHSLRQEGGVSGFTKRSESVYDPFGAAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG  +GRD+     + +AVIGDGA+TAG AYEAMN AG+L   M VILNDN  +S+   
Sbjct: 123 ALGFTLGRDMGQPTGDAIAVIGDGAITAGMAYEAMNAAGHLGKRMFVILNDN-DMSIA-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL+  L+ L  ++P   LR++A+G    + GP+ E A +  +   GM SG
Sbjct: 180 ------PPVGALNRYLNGLSRHKPFDLLRDMAEGFEAALPGPLREGARRARQIVTGMPSG 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +  TLFE+LG  YIGPVDGH++ DL+A L   K T+ TGPVLIH VT KG+GY  AE +A
Sbjct: 234 A--TLFEQLGFSYIGPVDGHSMPDLLATLRAAK-TRATGPVLIHAVTVKGKGYAPAENSA 290

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DKYHGVAKFD  +G Q K+ +   +YT+ F   L   A  D  +VA+ AAM  GTGL++ 
Sbjct: 291 DKYHGVAKFDVVSGTQAKAKSNAPAYTSVFGRCLTEAAARDGKIVAVTAAMPTGTGLDIM 350

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             RFP R FDVGIAEQHAVTFAAG+A  GLKPF AIYS+F+QR YDQ+VHDV LQ LPVR
Sbjct: 351 AERFPARVFDVGIAEQHAVTFAAGMAASGLKPFVAIYSTFLQRGYDQIVHDVALQGLPVR 410

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G+FDV F+A LP  VVMA  DEAEL HMVATAAA D+ P  FR
Sbjct: 411 FAIDRAGLVGADGATHAGAFDVGFLANLPGFVVMAAGDEAELAHMVATAAAYDEGPISFR 470

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G GV++P  ++G  L++GKGR+L +G  VALL +G  +  CL A+  L + G+ +
Sbjct: 471 YPRGEGSGVQMP--DQGQVLQIGKGRVLRQGSDVALLCFGAHLPECLLAAEGLAAQGISV 528

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KPLD  LI  LA+ H+ +ITVE+G+ GGFG+ V++++A  G LD  V+ R L
Sbjct: 529 TVADARFAKPLDTDLITQLARHHQAVITVEQGARGGFGAQVLEYMANSGGLDHGVRLRTL 588

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            LPDR+I+  SPA   A AGL+ + I   V  +L Q  + L 
Sbjct: 589 TLPDRFIEQASPAAMYADAGLSVADITRAVERVLPQRVQVLR 630


>gi|170744434|ref|YP_001773089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
 gi|168198708|gb|ACA20655.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
          Length = 663

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/648 (57%), Positives = 459/648 (70%), Gaps = 28/648 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD +  P  ++ L   +L QLA ELRA+ I  VS TGGHLG+ LGV+ELTVALHYVF+
Sbjct: 7   PLLDRVRDPSELRALPESDLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHYVFH 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKR+ES YD FG  HSSTSIS
Sbjct: 67  TPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSIS 126

Query: 195 AGLGMAVGRDLKG----------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           AGLGMAV RDL             + NVVAVIGDG+++AG AYEAMNNAG L S ++VIL
Sbjct: 127 AGLGMAVARDLAEAAARARGETPERRNVVAVIGDGSISAGMAYEAMNNAGALRSRLVVIL 186

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           ND               PPVGA+S+ L+RL S    R LR+ A+   + +   +++ A +
Sbjct: 187 NDMSIA-----------PPVGAMSAYLARLVSGDTYRSLRDTARQFGRLLPKALYDTAVR 235

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +EYARG+++G G T+FEELG +Y+GP+DGHN+D L+ IL+ V++    GPVL+HVVT+K
Sbjct: 236 AEEYARGILAGGG-TMFEELGFHYVGPIDGHNLDHLLPILKNVRDAPE-GPVLVHVVTQK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE AAD+ H V KFD  +G+Q K+ A   +YT  F E+L+  A+ D  VVAI A
Sbjct: 294 GKGYAPAEAAADRGHAVVKFDVVSGQQVKAKANAPTYTRVFGESLVKAADADDKVVAITA 353

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTG++LF +  P R FDVGIAEQHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVV
Sbjct: 354 AMPSGTGVDLFAKAHPGRTFDVGIAEQHAVTFAAGLAAEGYRPFCAIYSTFLQRAYDQVV 413

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++ CLPNMVVMA +DEAEL HMVATA
Sbjct: 414 HDVALQNLPVRFALDRAGLVGADGATHAGAFDLAYLCCLPNMVVMAAADEAELVHMVATA 473

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQSCL 602
            A D  P  FRYPRG G+GV+LP   KG  L +G+GR++   EG RVAL+  GT +   L
Sbjct: 474 HAHDAGPIAFRYPRGEGVGVDLP--EKGEVLALGRGRVIRRPEGARVALVSLGTRLAEAL 531

Query: 603 AASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQ 662
            A+  LE  G+ +TVADARF KPLD  L+  LA SHEVL+TVEEGS GGFG+ V+  LA 
Sbjct: 532 KAAEQLEERGIGVTVADARFAKPLDEGLLLDLAGSHEVLVTVEEGSTGGFGAMVLHLLAG 591

Query: 663 DGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            G LD GTV+ R L LPD Y DH +P    AQAGL    I   V + L
Sbjct: 592 RGALDAGTVRVRTLTLPDSYQDHDTPERMYAQAGLDAPAIVRAVEHAL 639


>gi|294084634|ref|YP_003551392.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664207|gb|ADE39308.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 640

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/628 (55%), Positives = 457/628 (72%), Gaps = 13/628 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLD I+    ++ +   +L++LA ELR + I  V+KTGGHLG+ LGV+ELTVALHYVF
Sbjct: 7   TPLLDKISAIKDLRRIPESDLQRLAAELRHETIRAVAKTGGHLGAGLGVVELTVALHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILTGRRD++ T+RQ DGLSGFTKR ESE+D FG GHSSTSI
Sbjct: 67  NTPDDRLIWDVGHQAYPHKILTGRRDRIETLRQRDGLSGFTKRDESEFDPFGAGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV  DL+    NV+AVIGDGAM+AG AYEAMNNAG  +S +IVILNDN  +S+ 
Sbjct: 127 SAGLGMAVASDLQSTPRNVIAVIGDGAMSAGMAYEAMNNAGASESRLIVILNDN-DMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                    PVGA+SS LSRL ++ P   +R++ + VT +    +   A +  + AR +I
Sbjct: 186 Q--------PVGAMSSYLSRLITSEPFHSIRDLVREVTSKFPAEIERTARRAKDVARDLI 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +  ++F +LG  +IGP+DGH+V+ L+ IL+ +++T T GPVL+HVVTEKG G+P+ ++
Sbjct: 238 GVN--SVFSQLGFMHIGPLDGHDVNQLLPILKNLRDTHTNGPVLLHVVTEKGHGHPFKDQ 295

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           + +KYH V KFD  TG Q KS+    +YT+ FA +LI  AE D  +VAI AAM  GTGL+
Sbjct: 296 SHEKYHAVPKFDIITGTQQKSAGNVPNYTSVFANSLIKAAEADSKIVAITAAMPSGTGLD 355

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
               +FP+R FDVGIAEQHAVTFAAG+A EG+KPFCA+YS+F+QR YDQ++HDV LQ LP
Sbjct: 356 KLKAKFPSRVFDVGIAEQHAVTFAAGMASEGMKPFCALYSTFLQRGYDQLIHDVCLQNLP 415

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAG+VGADG TH G +DV +++CLPNMV+M PSDEAEL HMVAT+ A DD PS 
Sbjct: 416 VRFAIDRAGVVGADGATHAGIYDVAYLSCLPNMVIMCPSDEAELIHMVATSVAYDDGPSA 475

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G ELP   + +P  +GKGR++ EG+ +A+L  GT +  CLAA+  +   G+
Sbjct: 476 LRYPRGEGVGCELPDEAEILP--IGKGRMIREGDDIAILSLGTRLTDCLAAADAMAVQGV 533

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
            + VADARF KPLD  L+  LA ++  L+ VEE S GGF +HV+ +LA  GLLD  ++ R
Sbjct: 534 NVAVADARFAKPLDTDLLAHLATNYRKLVIVEENSPGGFSAHVMTYLANHGLLDTGLQVR 593

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHI 701
            + LPD YI+H S A QLA AG+  + I
Sbjct: 594 LMTLPDIYIEHDSQAGQLALAGIDAAGI 621


>gi|126741030|ref|ZP_01756713.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
 gi|126717956|gb|EBA14675.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
          Length = 642

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/646 (56%), Positives = 447/646 (69%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD I  P  MK LS  +L QLA ELR + I  VS TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPNTPLLDQIARPADMKGLSDAQLVQLAHELRQETISAVSVTGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P+D+++WDV HQ YPHKILT RRD++ T+R  +GLSGFTKRSES YD FG  H
Sbjct: 62  LHAVFDTPRDKLIWDVSHQCYPHKILTERRDRIRTLRMKEGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGR----KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G       + +AVIGDG+M+AG A+EAMNNAG+L+  + V+L
Sbjct: 122 SSTSISAALGFSVARDLGGVIPEGNGDAIAVIGDGSMSAGMAFEAMNNAGHLNKRLFVVL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P +EL+ VAKG    +  P  E A +
Sbjct: 182 NDN-EMSI--------APPVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G TLFE LG  Y+GP+DGH++D L+ +L  +K  + TGPVLIHV+T+K
Sbjct: 233 AKDMLKGM--AVGGTLFESLGFSYLGPIDGHDMDQLLPVLRTLK-ARATGPVLIHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TGKQ K+ +   SYT+ F   L+  A  D  + A+ A
Sbjct: 290 GKGYGPAETARDKGHATAKFDVLTGKQHKAPSNAPSYTSVFGNELVKLAAKDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL L   R+P+R FDVGIAEQH VTFA  LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLALMAERYPSRTFDVGIAEQHGVTFAGALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ LPVRFA+DRAGLVGADG TH GSFD+ F+A LP+MVVMA +DEAEL HMVATA
Sbjct: 410 HDVALQGLPVRFAIDRAGLVGADGATHAGSFDIGFLANLPSMVVMAAADEAELVHMVATA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA DD P  FRYPRG G GVE+P   +   LE+GK R++ EG RVALL +GT +     A
Sbjct: 470 AAYDDGPIAFRYPRGEGEGVEMP--EEPQILEIGKSRMIQEGARVALLSFGTRLGETRKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ DARF KPLD  +I  LA +HE LIT+EEG++GGFGSHV Q L+ +G
Sbjct: 528 AEALSAKGITPTIVDARFAKPLDREMILDLAANHEALITIEEGAVGGFGSHVAQLLSDEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D   K+R +VLPD +ID  SP D    A +    I A V  +LG
Sbjct: 588 IFDRGFKFRSMVLPDSFIDQASPKDMYEAAAMNAPQIEAKVLEVLG 633


>gi|21328654|gb|AAM48660.1| deoxyxylulose-5-phosphate synthase [uncultured marine
           proteobacterium]
          Length = 630

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/634 (57%), Positives = 445/634 (70%), Gaps = 14/634 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD I  P  +K LS ++L QLADELR DVI  VS+TGGHLGSSLGV+ELTVALH VF+ 
Sbjct: 4   LLDEITAPSDLKTLSDQQLAQLADELRVDVIEAVSRTGGHLGSSLGVVELTVALHAVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+++WDVGHQ YPHK+LTGRR  M T+RQ  GLSGFTKRSES YD FG  HSSTSISA
Sbjct: 64  PKDKLIWDVGHQCYPHKVLTGRRAGMGTLRQEGGLSGFTKRSESPYDPFGAAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
             G  V RDL     + +AVIGDG+++AG AYEA+NNAG     M VILNDN ++S+   
Sbjct: 124 AHGFTVARDLGQDTGDAIAVIGDGSISAGMAYEALNNAGAEGRRMFVILNDN-EMSIA-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGA+S  +S L +   L +L    + +   + GPM + A +  E   G ++ 
Sbjct: 181 ------PPVGAMSKYMSGL-AGTALAQLNAFGQDIETVLPGPMRDHARRARELVTGAVAS 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
            G T+FEELG  YIGP+DGH++  L+++L   + T+  GPVLIH  T KG+GY  AE +A
Sbjct: 234 QG-TIFEELGFEYIGPIDGHDMSQLLSVLRSAR-TRAKGPVLIHCCTVKGKGYAPAETSA 291

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DKYHGVAKFD A+G Q KS A   SYTT F + L   AE D  +V I AAM  GTGL++F
Sbjct: 292 DKYHGVAKFDVASGAQMKSGANAPSYTTVFGQTLTKLAEKDSKIVGITAAMPSGTGLDIF 351

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +RF  R FDVGIAEQH VTFAAGLA  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVR
Sbjct: 352 AQRFADRMFDVGIAEQHGVTFAAGLAASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVR 411

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G+FD+ F+  LPNMVVMA +DEAEL HM+ TAAA D  P  FR
Sbjct: 412 FAIDRAGLVGADGATHAGAFDIGFLTALPNMVVMAAADEAELVHMITTAAAHDTGPIAFR 471

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G GV +P   +G  L++GKGRI+  G  +ALL +G  +   L A+ L+ + G+  
Sbjct: 472 YPRGTGTGVSIP--QEGELLQIGKGRIVRPGAEIALLSFGGHLAEALKAADLISAQGVDA 529

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPL 675
           TVADARF KPLDHALI  LAK+H+VLIT+E+G+ GGFG+ V+ +LA  GLLDG +  R +
Sbjct: 530 TVADARFAKPLDHALISKLAKTHKVLITIEQGAQGGFGAMVLHYLADTGLLDGPLAVRSM 589

Query: 676 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            LPDR+ID  +P    A AGLT + IAAT    L
Sbjct: 590 TLPDRFIDQAAPDAMYADAGLTATDIAATALQAL 623


>gi|393719494|ref|ZP_10339421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas echinoides
           ATCC 14820]
          Length = 641

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/638 (57%), Positives = 448/638 (70%), Gaps = 18/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT++YP  ++ L+  +L+QLADELR + I  V  TGGHLGS LGV+ELTVA+HYVF
Sbjct: 7   TPLLDTVHYPADLRALAPTQLRQLADELRQETIAAVGVTGGHLGSGLGVVELTVAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DR++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 67  DTPNDRLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG AV   + G+    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S+ 
Sbjct: 127 SASLGFAVANKIAGKPGKGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG LS+ LSR+ S+R     R++A+ + K++  P+     K +E+ARGM 
Sbjct: 186 --------PPVGGLSAYLSRIVSSREFLGFRDLARKLAKRLPKPIATGMRKTEEFARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +LE V++ +  GP+L+HVVT+KG+GY  AE 
Sbjct: 237 -AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGV KFD  TG Q K+      Y   F   L  EAE D  + AI AAM  GTGL+
Sbjct: 295 AADKYHGVQKFDVITGAQAKAPPGPPQYQNVFGAQLSKEAETDPLICAITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 355 GFSKAHPERFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFDVT+MA LPNMVVMAP+DEAEL HM  TA   D  P  
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDVTYMASLPNMVVMAPADEAELVHMTHTAVLHDSGPIA 474

Query: 554 FRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
            RYPRGNG GV LP     +P  LE+GKGRI+ +G +VA+L  GT +   L A+  LE+ 
Sbjct: 475 LRYPRGNGTGVALPE----VPQQLEIGKGRIVRQGHKVAILSLGTRLGEALRAAEALEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  +HEV +T+EE S+GG G+HV+ F +  GL+D  +K
Sbjct: 531 GLSTTVADLRFAKPLDEELIRKLLTTHEVAVTIEEASVGGLGAHVLTFASDAGLIDAGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + D   P  Q AQAGL    I  TV   L
Sbjct: 591 LRTMRLPDLFQDQDKPEVQYAQAGLDADAIVETVLKAL 628


>gi|254561124|ref|YP_003068219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
 gi|254268402|emb|CAX24359.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Methylobacterium extorquens DM4]
          Length = 660

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/646 (58%), Positives = 464/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 189 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 239

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 240 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 297

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 298 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 357

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 358 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 417

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ LPVRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA SDEAEL HMVA
Sbjct: 418 VVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAASDEAELVHMVA 477

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 478 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 535

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 536 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 595

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 596 AERGVLDTGRVRVRTLTLPDSYQDHDKPEKMYAEAGLDAEGILKAV 641


>gi|86136863|ref|ZP_01055441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
 gi|85826187|gb|EAQ46384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
          Length = 642

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/646 (56%), Positives = 448/646 (69%), Gaps = 18/646 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S RP TPLLD I  P  MK LS  +L QLA ELR + I  VS+TGGHLG+ LGV+ELTVA
Sbjct: 2   SDRPSTPLLDQIARPTDMKGLSDSQLVQLAHELRQETISAVSETGGHLGAGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH +F+ P+D+++WDV HQ+YPHKILT RRD++ T+R   GLSGFTKRSES YD FG  H
Sbjct: 62  LHAIFDTPRDKLIWDVSHQSYPHKILTERRDRIRTLRTKGGLSGFTKRSESPYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRK----NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVIL 244
           SSTSISA LG +V RDL G         +AVIGDG+M+AG A+EAMNNAG+L   MIVIL
Sbjct: 122 SSTSISAALGFSVARDLGGVVPEGLGEAIAVIGDGSMSAGMAFEAMNNAGHLKKRMIVIL 181

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN ++S+         PPVGALSS LSRL +  P +EL+ VAKG    +  P  E A +
Sbjct: 182 NDN-EMSI--------APPVGALSSYLSRLYAEEPFQELKAVAKGAASLLPEPFREGAKR 232

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
             +  +GM    G T+FE  G  Y+GP+DGH++D L+ +L  VK  + TGPVLIHV+T+K
Sbjct: 233 AKDMLKGM--AVGGTMFESFGFSYLGPIDGHDMDQLLPVLRTVK-ARATGPVLIHVLTKK 289

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE A DK H  AKFD  TGKQ K+ +   SYT  F + L+  A  D  + A+ A
Sbjct: 290 GKGYGPAEAARDKGHATAKFDVVTGKQHKTPSNAPSYTGVFGDELVKLAAKDDKICAVTA 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  GTGL+L   R+P+RCFDVGIAEQH VTFAA LA  G+KPFCA+YS+F+QR YDQVV
Sbjct: 350 AMPDGTGLSLMAERYPSRCFDVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ +MA LP MVVMA +DEAEL HMV TA
Sbjct: 410 HDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIGYMANLPGMVVMAAADEAELVHMVHTA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
           AA D  P  FRYPRG G GVE+P   +   LE+GKGR++ EG RVALL +GT +     A
Sbjct: 470 AAHDAGPIAFRYPRGEGEGVEMP--EEPQLLEIGKGRMIQEGSRVALLSFGTRLGEVKKA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDG 664
           +  L + G+  T+ADARF KPLD  +I  L   HE LI++EEG++GGFGSHV Q L+ +G
Sbjct: 528 AEALAAKGITPTIADARFAKPLDREMILDLVAGHEALISIEEGAVGGFGSHVAQLLSDEG 587

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + D   K+R +VLPD +ID  SPAD    A +    I A V  +LG
Sbjct: 588 VFDRGFKFRSMVLPDIFIDQSSPADMYETAAMNAPQIEAKVLEVLG 633


>gi|188581083|ref|YP_001924528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
           BJ001]
 gi|179344581|gb|ACB79993.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
          Length = 660

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/646 (57%), Positives = 464/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 194 SAGLGMAVGRDLK-----------GRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL            G++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 129 SAALGMAVARDLDDAEAKAKGEAPGKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 189 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 239

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 240 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 297

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 298 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 357

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 358 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 417

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ LPVRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 418 VVHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 477

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           TA A D  P   RYPRG G+GVELP    G PL +G+GR++   EG RVALL  GT +  
Sbjct: 478 TAHAHDSGPIALRYPRGEGVGVELP--ESGEPLAIGRGRVVRRPEGARVALLSLGTRLSE 535

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+ ++VADARF KPLD  +I  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 536 ALKAADALEAEGVAVSVADARFAKPLDAEMIVDLANSHEVLVTVEEGSVGGFGAMVLHLL 595

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           ++ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 596 SERGVLDAGRVRVRTLTLPDVYQDHDKPEKMYAEAGLDAEGILKAV 641


>gi|254293554|ref|YP_003059577.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hirschia baltica ATCC
           49814]
 gi|254042085|gb|ACT58880.1| deoxyxylulose-5-phosphate synthase [Hirschia baltica ATCC 49814]
          Length = 642

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/638 (56%), Positives = 451/638 (70%), Gaps = 16/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI+ P  +K  SI EL ++ADELR + I  VS TGGHLGS+LGV+ELTVA+H VF
Sbjct: 5   TPLLDTISSPADLKTKSIEELVEVADELRRETIDVVSTTGGHLGSALGVVELTVAIHKVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D+++WDVGHQ YPHKILT RR ++ T+RQ  GLSGFTKRSESEYD FG  H+ TSI
Sbjct: 65  DTPDDKLVWDVGHQCYPHKILTERRAEIRTLRQGGGLSGFTKRSESEYDPFGAAHAGTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAG G A  RDLK    NVV VIGDG+MTAG AYEAMN+ G +   MIVILNDN  +S+ 
Sbjct: 125 SAGAGFATARDLKDEDRNVVCVIGDGSMTAGMAYEAMNHMGGMHKRMIVILNDN-DMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGALS  LS+  S++  R+ R+  K + K +G  + + A K + YAR   
Sbjct: 184 --------PPVGALSHYLSKTVSSKGYRQFRKAGKMMAKTVG--LEKPAKKAEHYARDF- 232

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G  +F+ LG YY+GP+DGH++D L+ +LE V++ K  GPVL+HVVTEKG+G+  AEK
Sbjct: 233 -ALGGAMFDALGFYYVGPIDGHDLDTLIPVLENVRDMKN-GPVLVHVVTEKGKGFEPAEK 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV+KF+  TG+Q KS     SYT  FA+ LI  A+ D+ +V I AAM  GTG++
Sbjct: 291 SADKYHGVSKFNVITGEQAKSKPNAPSYTNVFAQELIRLAKDDERIVGITAAMPSGTGMD 350

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F   FP R FDVGIAEQH VTFAA +A +G+KPFCAIYS+F+QRAYD VVHDV +QKLP
Sbjct: 351 KFGDAFPERMFDVGIAEQHGVTFAAAMAADGMKPFCAIYSTFLQRAYDSVVHDVAIQKLP 410

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ ++  LP+ V+MA SDEAEL  MVATA AIDD PS 
Sbjct: 411 VRFAIDRAGLVGADGATHAGSFDIGYLGALPDFVLMAASDEAELQRMVATAHAIDDCPSA 470

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FR+PRG GIG++L    +  PLE+GKGRI+ EG  +A+L  G  +Q  L A+ +LE+ G 
Sbjct: 471 FRFPRGEGIGIDL--WERAEPLEIGKGRIVKEGTTIAILALGARLQEALHAADMLEAQGF 528

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  LI  LAK HEVLITVEEG+ GGFGS V++ LA+ G LD  ++ R
Sbjct: 529 STTVADARFAKPLDTDLIERLAKEHEVLITVEEGARGGFGSFVLEHLAKVGALDNGLRIR 588

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           P+ LPD + D   P      AGL+   IA      LG+
Sbjct: 589 PMTLPDVFQDQNKPELMYEDAGLSAKAIATQAIAALGR 626


>gi|114798103|ref|YP_760539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
           15444]
 gi|122942403|sp|Q0C154.1|DXS_HYPNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114738277|gb|ABI76402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
           15444]
          Length = 640

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/639 (58%), Positives = 458/639 (71%), Gaps = 16/639 (2%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P  LLD I+ P  +K  S  +LKQ+A E+R +V+  VS TGGHLGS LGV+ELTVA+H V
Sbjct: 6   PNRLLDAIDTPSDLKGRSRADLKQIAAEVREEVVDVVSVTGGHLGSGLGVVELTVAIHSV 65

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           F+ P D+++WDVGHQ YPHKILTGR+D+M T+RQ  GLSGFTKRSESEYD FG  H+STS
Sbjct: 66  FDTPDDKLVWDVGHQCYPHKILTGRKDRMRTLRQGGGLSGFTKRSESEYDPFGAAHASTS 125

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           ISAGLG A  RDL+ + N+V+ VIGDG+M+AG AYEAMNNAG   S MIVILNDN  +S+
Sbjct: 126 ISAGLGFAKSRDLQNKDNHVICVIGDGSMSAGMAYEAMNNAGADRSRMIVILNDN-DMSI 184

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGA+S   SRL S+RP R LR +AK V + +G  +   A + +EY RG 
Sbjct: 185 A--------PPVGAMSHYFSRLVSSRPYRGLRRIAKKVVQPMG--LESPARRAEEYLRGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
               G TLFEE+G YYIGPVDGH++D L+ +LE +K  +  GP+L+HVVT+KG+GY  AE
Sbjct: 235 --AMGGTLFEEMGFYYIGPVDGHDLDTLLDLLENIKAMQD-GPILLHVVTQKGKGYAPAE 291

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            +ADKYHGV+KF   TG+Q K +    SY   F + L    E D  + AI AAM  GT  
Sbjct: 292 NSADKYHGVSKFSVVTGEQAKGAGGPPSYQKVFGQTLAKLGETDDKICAITAAMPSGTST 351

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           ++F ++FP R FDVGIAEQHAVTFAAGLA +G+KPFCAIYS+F+QR YDQVVHDV +Q+L
Sbjct: 352 DIFGKKFPDRHFDVGIAEQHAVTFAAGLAADGMKPFCAIYSTFLQRGYDQVVHDVAIQQL 411

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PVRFA+DRAGLVGADG TH GSFD+ ++  LP  V MAPSDEAEL  MV T+  IDDRPS
Sbjct: 412 PVRFAIDRAGLVGADGATHAGSFDIGYLGALPGFVCMAPSDEAELARMVLTSLEIDDRPS 471

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G+GV +P   K  PLE+GKGR++ EG  +A+L YGT +Q  L A+ +L + G
Sbjct: 472 AVRYPRGEGVGVVIPDLLK--PLEIGKGRVVREGTSIAILSYGTRLQEALKAAEMLAAQG 529

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKW 672
           L  TVADARF KPLD+ LI  LA+ HEVL+T+EEGS GGFGS V++ LA  G LD  +K 
Sbjct: 530 LSATVADARFAKPLDNELIERLAREHEVLVTIEEGSRGGFGSFVLEHLANCGGLDAGLKV 589

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           R + LPD + DH +PA    QAGLT  HIAA     LG+
Sbjct: 590 RVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628


>gi|254563642|ref|YP_003070737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
 gi|254270920|emb|CAX26925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
          Length = 658

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/646 (58%), Positives = 463/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELRRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA SDEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAASDEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 475 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 532

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 533 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 592

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 593 AERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGILKAV 638


>gi|218532564|ref|YP_002423380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens CM4]
 gi|218524867|gb|ACK85452.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           CM4]
          Length = 658

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/646 (57%), Positives = 463/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELRRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 475 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 532

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 533 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 592

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 593 AERGVLDTGRVRVRTLTLPDSYQDHDKPEKMYAEAGLDAEGILKVV 638


>gi|410687145|ref|YP_006965280.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
           guttiformis]
 gi|399920087|gb|AFP55491.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
           guttiformis]
          Length = 630

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/631 (57%), Positives = 440/631 (69%), Gaps = 22/631 (3%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           R PTP LD ++ P  MK L+  EL+ LADELR +VI  V+ TGGHLGSSLGV+ELTVALH
Sbjct: 2   RSPTPQLDRVSAPSDMKALTDAELRILADELREEVIETVATTGGHLGSSLGVVELTVALH 61

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VF+ P+D+++WDVGHQ YPHKILTGRR KMHT+RQ  GLSGFTKRSESE+D FG  HSS
Sbjct: 62  AVFDTPRDKVIWDVGHQCYPHKILTGRRHKMHTLRQEGGLSGFTKRSESEFDPFGAAHSS 121

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LG  V RD+     + +AVIGDG+++AG AYEAMNNAG +   M VILNDN ++
Sbjct: 122 TSISAALGFTVARDMGEATGDAIAVIGDGSISAGMAYEAMNNAGAMGRRMFVILNDN-EM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGA+S         R +  L E A G    + GP+ + A +  +   
Sbjct: 181 SIA--------PPVGAMS---------RYMSGLTEFANGTLAALPGPLRDHARRARQLVT 223

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G +    STLFE LG  YIGP+DGH++  L+ +L   + T+ TGPVLIH  T KG+GY  
Sbjct: 224 GAVE-EQSTLFENLGFQYIGPIDGHDMGQLLGVLRAAR-TRATGPVLIHCCTVKGKGYAP 281

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE A+D YHGV KFDP TG Q KS     SYT  F +AL  EA  D  +VAI AAM GGT
Sbjct: 282 AEAASDSYHGVGKFDPVTGIQAKSKPNAPSYTEIFGKALTEEARRDPKIVAITAAMPGGT 341

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL++F +  P R FDVGIAEQH VTFAAG+A  GLKPF AIYSSF+QR YDQ+VHDV LQ
Sbjct: 342 GLDIFAKTHPNRMFDVGIAEQHGVTFAAGVAAGGLKPFVAIYSSFLQRGYDQIVHDVALQ 401

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFA+DRAGLVGADG TH G+FD+ ++  LPNMVVMA SDEAEL HMVATAAA DD 
Sbjct: 402 NLPVRFAIDRAGLVGADGATHAGAFDIGYLVALPNMVVMAASDEAELVHMVATAAAYDDG 461

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRG G GV LP   +G+PLE+GKG I+ +G  VA+L +G  +     A+ L+E+
Sbjct: 462 PIAFRYPRGEGEGVTLP--ERGVPLEIGKGVIVRQGFDVAILSFGAHLGESQRAADLIEA 519

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV 670
            GL +TVADARF KPLD ALI  LA+ H VLITVE+GS GGFGS V+  LA +G LD T+
Sbjct: 520 QGLTVTVADARFAKPLDKALINQLARKHRVLITVEQGSRGGFGSMVLDHLANEGWLDKTL 579

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
             R + LPDR+ID  +P    A AG+T   I
Sbjct: 580 AVRTVNLPDRFIDQAAPDAMYADAGMTAGDI 610


>gi|89052661|ref|YP_508112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
 gi|118595486|sp|Q28W25.1|DXS2_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|88862210|gb|ABD53087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
          Length = 636

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/642 (55%), Positives = 452/642 (70%), Gaps = 18/642 (2%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD +NYP  ++ +S  +L Q ADELRA+VI  VS+TGGHLGSSLGV+EL+VA+H
Sbjct: 3   RPHTPILDQVNYPSDLRRMSNADLAQCADELRAEVISAVSETGGHLGSSLGVVELSVAIH 62

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
            VFN P D+++WDVGHQ YPHK+LTGRRD++ T+RQ DGLSGFTKRSESEYD FG  HSS
Sbjct: 63  AVFNTPYDKLVWDVGHQCYPHKVLTGRRDRIRTLRQKDGLSGFTKRSESEYDPFGAAHSS 122

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LG A  +DL     + +AVIGDG+++AG AYEA+NNAG L   + VILNDN ++
Sbjct: 123 TSISAALGFAAAQDLGEATGDGIAVIGDGSISAGMAYEALNNAGDLGKRLFVILNDN-EM 181

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGA+S  L+ L +  PL  L+++A GV   +  P+ + A    E AR
Sbjct: 182 SIA--------PPVGAMSKYLTDLSAKSPLATLKDIADGVASHLPEPIRQGA----ERAR 229

Query: 311 GMISG--SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            +++G    +TLFE LG  YIGPVDGH++++L+  L   K  + TGPVLIH VT KG+GY
Sbjct: 230 ELVTGHQPSATLFEHLGFTYIGPVDGHDMEELLTTLRAAK-ARATGPVLIHAVTVKGKGY 288

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE + D YHGVAKFD ATG+Q KS+    SYT+ F + L+  AE D  +V + AAM G
Sbjct: 289 SPAELSDDCYHGVAKFDVATGQQKKSAPNAPSYTSVFGQTLLNMAEADSRIVGVTAAMPG 348

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++   +  P R FDVGIAEQHAVTF+AG+A  GLKPFCAIYSSF+QR YDQ+VHDV 
Sbjct: 349 GTGISTLQKAKPNRVFDVGIAEQHAVTFSAGMAAGGLKPFCAIYSSFLQRGYDQIVHDVA 408

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPVRF +DRAGLVGADGPTH G+FD+ +++ LPNM VMA +DEAEL HM+ATAAA +
Sbjct: 409 LQSLPVRFMIDRAGLVGADGPTHAGAFDIGYLSALPNMTVMACADEAELVHMMATAAAHN 468

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D P   RYPRG G GV LP  ++G  LE+GKGR++ +G  VA+L +G  ++    A+  L
Sbjct: 469 DGPIALRYPRGEGTGVALP--DQGDVLEIGKGRVIQDGHDVAILSFGAHLEEAKDAATAL 526

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL +TVADARF KPLD  LI  L   H  LITVE+G++ GFG  V+  LA  G LDG
Sbjct: 527 EARGLSVTVADARFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDG 586

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
               R L LPDR+ID  SPA+  A AGLT   IA      +G
Sbjct: 587 RCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAMG 628


>gi|163853706|ref|YP_001641749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens PA1]
 gi|163665311|gb|ABY32678.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           PA1]
          Length = 658

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/646 (57%), Positives = 463/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELRRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 475 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 532

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 533 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 592

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 593 AERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGILKVV 638


>gi|240138460|ref|YP_002962932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
 gi|240008429|gb|ACS39655.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Methylobacterium extorquens AM1]
          Length = 660

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/646 (57%), Positives = 463/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 189 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 239

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 240 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 297

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 298 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 357

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 358 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 417

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 418 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 477

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 478 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 535

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 536 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 595

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 596 AERGVLDTGRVRVRTLTLPDSYQDHDKPEKMYAEAGLDAEGILKAV 641


>gi|85703516|ref|ZP_01034620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
 gi|85672444|gb|EAQ27301.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
          Length = 661

 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/670 (54%), Positives = 457/670 (68%), Gaps = 15/670 (2%)

Query: 53  RPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKT 112
           R  G+ A+  E       RP TPLLD +  P  ++ +   +L  LADELRA+VI  VS+T
Sbjct: 7   RAGGISAT-GEEAAMTQDRPNTPLLDRVAGPSDLRQMPDEKLALLADELRAEVISAVSET 65

Query: 113 GGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSG 172
           GGHLGSSLGV+EL VA+H VFN P D+++WDVGHQ YPHKILTGRRD++ T+RQ DGLSG
Sbjct: 66  GGHLGSSLGVVELAVAIHAVFNTPIDKLVWDVGHQCYPHKILTGRRDRIRTLRQKDGLSG 125

Query: 173 FTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNN 232
           FTKRSES YD FG  HSSTSISA LG AV RD+     + +AVIGDG+++AG AYEA+NN
Sbjct: 126 FTKRSESIYDPFGAAHSSTSISAALGFAVARDMGQATGDAIAVIGDGSISAGMAYEALNN 185

Query: 233 AGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK 292
           AG     + VILNDN ++S+         PPVGA+SS LSR+ ++ PL  +  +A+G   
Sbjct: 186 AGAEGRRLFVILNDN-EMSI--------APPVGAMSSYLSRMYASEPLARMASLAEGFEA 236

Query: 293 QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKT 352
            +  P+ E A +  +   G+ +GSG TLFEELG  Y+GP+DGH++  L+++L   + T+ 
Sbjct: 237 ALPAPLRESAKRARQLVTGL-TGSG-TLFEELGFQYVGPIDGHDMGQLLSVLRAAR-TRA 293

Query: 353 TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAE 412
           TGPVLIH  T KG+GY  AE AAD+ HGV+KFDPATG Q KS     SYT  F +AL  E
Sbjct: 294 TGPVLIHCCTVKGKGYAPAEGAADRGHGVSKFDPATGAQAKSKPGAPSYTGVFGQALTDE 353

Query: 413 AEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIY 472
           A  D  +VA+ AAM  GTGL     RFP R FDVGIAEQHAVTFAAG+A  GLKPFCAIY
Sbjct: 354 AARDDRIVAVTAAMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAAGMAASGLKPFCAIY 413

Query: 473 SSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPS 532
           S+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++  LP M +MA +
Sbjct: 414 STFLQRAYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIGYLGNLPGMTLMAAA 473

Query: 533 DEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALL 592
           DEAEL HMVATAAA D  P  FRYPRG+G GV LP   +G PL +GKGRI+ EG  VA+L
Sbjct: 474 DEAELVHMVATAAAHDAGPIAFRYPRGSGTGVALP--ERGKPLAIGKGRIIEEGTDVAIL 531

Query: 593 GYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGF 652
            +G  +  C  A+ ++  +G+ +TVADARF KPLD  L+  L   H  LITVE+G++GGF
Sbjct: 532 SFGAHLFECQVAADMVADDGISVTVADARFAKPLDTDLLMQLVSHHRALITVEQGAMGGF 591

Query: 653 GSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
           GS V+  LA+ G  D  +  R L LPDR+ID  +P D    AGL+   IA  +   L   
Sbjct: 592 GSMVMHELARRGAFDKGLILRTLCLPDRFIDQANPEDMYVDAGLSAPQIADMIRASLAGR 651

Query: 713 REALEIMSFK 722
            E + +   +
Sbjct: 652 AEVVPLRQVR 661


>gi|163851366|ref|YP_001639409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens PA1]
 gi|163662971|gb|ABY30338.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           PA1]
          Length = 657

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/646 (57%), Positives = 463/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 475 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 532

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 533 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 592

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 593 AERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGILKAV 638


>gi|85709905|ref|ZP_01040970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
 gi|85688615|gb|EAQ28619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
          Length = 641

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/649 (55%), Positives = 461/649 (71%), Gaps = 14/649 (2%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S  P TPLLDTI  P  ++ L   +L+QLADELRA++I  VS +GGHLGS LGV+ELTVA
Sbjct: 2   SLSPSTPLLDTIPTPDELRKLKPEQLRQLADELRAEMIDAVSVSGGHLGSGLGVVELTVA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           +HYVFN P D+++WDVGHQ YPHKI+TGRRD++ T+RQ  GLSGFTKR+ESEYD FG  H
Sbjct: 62  IHYVFNTPDDKLIWDVGHQCYPHKIITGRRDRIRTIRQGGGLSGFTKRAESEYDPFGAAH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LG A+   L  +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN 
Sbjct: 122 SSTSISAALGFAIANKLNDKPGRGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDN- 180

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
            +S+         PPVG LS+ L+R+ S+     LR +A    K++   +H+   K +EY
Sbjct: 181 DMSIA--------PPVGGLSAYLARMVSSSEYLGLRSLASKAVKKMSRRLHDALGKAEEY 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           +RGM++G   TLFEELG YY+GP+DGHN+D L+ +LE V++T + GPVLIHVVTEKG+GY
Sbjct: 233 SRGMVTGG--TLFEELGFYYVGPIDGHNLDHLIPVLENVRDT-SEGPVLIHVVTEKGKGY 289

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE++ADKYHGV KF+  TG++ K SA   +Y   F + L   A+ DK + AI AAM  
Sbjct: 290 KPAEESADKYHGVPKFNVVTGEKQKGSAGAPAYQNVFGDTLADLADTDKRICAITAAMPS 349

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTG++ F +R P R FDVGIAEQH VTFAAGLA +G++PF AIYS+F+QRAYDQVVHDV 
Sbjct: 350 GTGVDRFAQRHPDRSFDVGIAEQHGVTFAAGLAAQGMRPFAAIYSTFLQRAYDQVVHDVA 409

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPVRFA+DRAGLVGADG TH GSFD+T++A LPNMVVMA +DEAEL HM  TA   D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGCTHAGSFDITYLATLPNMVVMAAADEAELVHMTYTAVEYD 469

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P  FRYPRG+G+GV LP   +   LE+GKGR++ EG +VA+L  G  ++    A+  L
Sbjct: 470 EGPIAFRYPRGSGVGVPLPETPQ--KLEIGKGRLVREGSKVAILSLGARLEEAKKAADQL 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG 668
           E+ GL  TVAD RF KPLD  LI  L ++HEV++T+EEG+IGG G+HV+ +   +GL D 
Sbjct: 528 EAKGLSTTVADMRFAKPLDEDLIARLMRTHEVVVTIEEGAIGGLGAHVLTYATDEGLTDN 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            +K R + LPD + D  SP  Q  +AGL+  HI  TV   L     ++E
Sbjct: 588 GLKVRTMRLPDTFQDQDSPDKQYEEAGLSAPHIVDTVLKALKHNSTSIE 636


>gi|240141131|ref|YP_002965611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
 gi|240011108|gb|ACS42334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
          Length = 658

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/646 (57%), Positives = 462/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T    D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 475 TCHVHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 532

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 533 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 592

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           A+ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 593 AERGVLDTGRVRVRTLTLPDLYQDHDKPEKMYAEAGLDAEGILKIV 638


>gi|218530174|ref|YP_002420990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens CM4]
 gi|218522477|gb|ACK83062.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           CM4]
          Length = 660

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/646 (57%), Positives = 462/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 189 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 239

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 240 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 297

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 298 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 357

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 358 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 417

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 418 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 477

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++   EG RVALL  GT +  
Sbjct: 478 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSE 535

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+  TVADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 536 ALKAADALEAEGVAATVADARFAKPLDAELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLL 595

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            + G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 596 TERGVLDTGRVRVRTLTLPDVYQDHDKPEKMYAEAGLDAEGILKAV 641


>gi|393723890|ref|ZP_10343817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26605]
          Length = 641

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/638 (56%), Positives = 448/638 (70%), Gaps = 18/638 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDT+N P  ++ L+  +L+QLADELR + I  V  TGGHLGS LGV+ELTVA+HYVF
Sbjct: 7   TPLLDTVNIPADLRTLAPTQLRQLADELRQETIAAVGMTGGHLGSGLGVVELTVAIHYVF 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D+++WDVGHQ YPHKILTGRRD++ T+R   GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 67  DTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG  V   +  +    +AVIGDGAM+AG AYEAMNNA    + ++VILNDN  +S+ 
Sbjct: 127 SAALGFGVANKIADKPGKGIAVIGDGAMSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVG LS+ LSR+ S+R     R++A+ + K++  P+ +   K +E+ARGM 
Sbjct: 186 --------PPVGGLSAYLSRIVSSREFLGFRDLARKLAKRLPKPIADGMRKTEEFARGM- 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
              G TLFEELG YY+GP+DGHN+D L+ +LE V++ +  GP+L+HVVT+KG+GY  AE 
Sbjct: 237 -AMGGTLFEELGFYYVGPIDGHNLDQLIPVLENVRDAEE-GPILVHVVTKKGKGYAPAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           AADKYHGV KFD  +G Q K+      Y   F   L  EAE D  + AI AAM  GTGL+
Sbjct: 295 AADKYHGVQKFDVISGVQTKAPPGPPQYQNVFGAQLSKEAETDPRICAITAAMPSGTGLD 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P R FDVGIAEQHAVTFAAGLA +G++PFCAIYS+F+QRAYDQVVHDV +Q LP
Sbjct: 355 AFAKAHPERFFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH GSFD+ ++A LPNMVVMAP+DEAEL HM  TA   D  P  
Sbjct: 415 VRFAIDRAGLVGADGATHAGSFDLAYLATLPNMVVMAPADEAELVHMTHTAILHDSGPIA 474

Query: 554 FRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
            RYPRGNG GVELP     +P  LE+GKGRI+ +G +VA+L  GT ++  L A+  LE+ 
Sbjct: 475 VRYPRGNGTGVELPV----VPEALEIGKGRIVRQGHKVAILSLGTRLEEALRAAEALEAK 530

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVAD RF KPLD  LIR L  +HEV +T+EEG++GG G+HV+ F +  GL+D  +K
Sbjct: 531 GLSTTVADLRFAKPLDEDLIRKLLTTHEVAVTIEEGAVGGLGAHVLTFASDSGLIDAGLK 590

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            R + LPD + D   P  Q AQAGL    I  TV   L
Sbjct: 591 LRTMRLPDIFQDQDKPELQYAQAGLDADAIVETVLKAL 628


>gi|188584012|ref|YP_001927457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
           BJ001]
 gi|179347510|gb|ACB82922.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
          Length = 658

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/646 (57%), Positives = 462/646 (71%), Gaps = 27/646 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLK-----------GRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL            G++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLDDAEARAKGEAPGKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P + FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI--EGERVALLGYGTAVQS 600
           TA A D  P   RYPRG G+GVELP    G PL +G+GR++   EG RVALL  GT +  
Sbjct: 475 TAHAHDSGPIALRYPRGEGVGVELP--ESGEPLAIGRGRVVRRPEGARVALLSLGTRLSE 532

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL 660
            L A+  LE+ G+ ++VADARF KPLD  LI  LA SHEVL+TVEEGS+GGFG+ V+  L
Sbjct: 533 ALKAADALEAEGVAVSVADARFAKPLDAELIVDLANSHEVLVTVEEGSVGGFGAMVLHLL 592

Query: 661 AQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           ++ G+LD G V+ R L LPD Y DH  P    A+AGL    I   V
Sbjct: 593 SERGVLDAGRVRVRTLTLPDVYQDHDKPEKMYAEAGLDAEGILKAV 638


>gi|357027710|ref|ZP_09089776.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
           amorphae CCNWGS0123]
 gi|355540411|gb|EHH09621.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
           amorphae CCNWGS0123]
          Length = 571

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/595 (60%), Positives = 433/595 (72%), Gaps = 25/595 (4%)

Query: 43  LDNHQIQLKKRPNGVCASLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELR 102
           +D H++Q+   P  V A+L            TPLLD +  P  ++ L   +L QLA ELR
Sbjct: 2   IDAHELQVSAGPLTVNATLH-----------TPLLDKVRIPADLRTLDEGQLPQLASELR 50

Query: 103 ADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMH 162
           A++I  VS TGGHLG+ LGV+ELTVALHYVFN P DR++WDVGHQ YPHKILTGRRD++ 
Sbjct: 51  AELIDAVSHTGGHLGAGLGVVELTVALHYVFNTPDDRLIWDVGHQAYPHKILTGRRDRIR 110

Query: 163 TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 222
           T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMA+ RDL G +NNV+AVIGDGAM+
Sbjct: 111 TLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAMARDLSGGRNNVIAVIGDGAMS 170

Query: 223 AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 282
           AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R    
Sbjct: 171 AGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTYLG 221

Query: 283 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 342
           LR+  K +T  +G        +  E+ARG ++G   TLFEELG Y+IGP+DGHN++ L+ 
Sbjct: 222 LRDFGKKLTSYLGKRADRAITRAVEHARGYVTGG--TLFEELGFYHIGPIDGHNLEHLIP 279

Query: 343 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 402
           +L+ V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+ A   SYT
Sbjct: 280 VLKNVRDNGD-GPVLIHVVTQKGKGYGPAEAAADKYHGVNKFDVITGAQAKAPANAPSYT 338

Query: 403 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 462
             FAE+L+ E   D  +VA+ AAM  GTGL+LF   FP+R FDVGIAEQHAVTFAAGLA 
Sbjct: 339 KVFAESLVQEGREDDRIVAVTAAMPNGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGLAT 398

Query: 463 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 522
           EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADG THCG+FD TF+A 
Sbjct: 399 EGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLAT 458

Query: 523 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 582
           LP  VVMA +DEAEL HMV TAA  DD P  FRYPRGNG+GVE+P   +G  LE+G+GRI
Sbjct: 459 LPGFVVMAAADEAELRHMVRTAAHYDDGPIAFRYPRGNGVGVEMP--ERGSVLEIGRGRI 516

Query: 583 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 637
           + EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  LIR LA+S
Sbjct: 517 VREGTKVALLSFGTRLQDCLLAAEELGAAGLSTTVADARFAKPLDEDLIRRLARS 571


>gi|354593293|ref|ZP_09011338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
           A911]
 gi|353673358|gb|EHD15052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
           A911]
          Length = 672

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/653 (54%), Positives = 463/653 (70%), Gaps = 31/653 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD I +P  + NLSI +L+Q+A ELRA+ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 33  PLLDHIRFPADLNNLSIEQLEQVARELRAETIDAVSTTGGHLGASLGVVELTVALHAVFD 92

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D ++WDVGHQ YPHKILTGRR+ + T+RQ  GLSGFTKRSES YD FG  HSSTSIS
Sbjct: 93  TPNDSLIWDVGHQAYPHKILTGRRELIRTLRQPGGLSGFTKRSESIYDPFGAAHSSTSIS 152

Query: 195 AGLGMAVGRDLKGR------KNNVVAVIGDGAMTAGQAYEAMNNA---GYLDSDMIVILN 245
           A LG+AV    K +      + N +AVIGDG++TAG AYEAMNNA   G     +IVILN
Sbjct: 153 AALGIAVANHYKAKHDPSYKERNSIAVIGDGSITAGMAYEAMNNAAVAGPGAEKLIVILN 212

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+          PVG++S  LS+L S+R    LR++A  V K++   + + A + 
Sbjct: 213 DN-EMSISQ--------PVGSMSVYLSQLLSSRHFLGLRDLAARVAKKLPESIEKKAKRA 263

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYAR M++G   TLFEELG YY+GP+DGHN+  LV +L  +++    GP+L+H+VT+KG
Sbjct: 264 EEYARSMMTGG--TLFEELGFYYVGPIDGHNLQQLVPVLRNLRDADQIGPILLHIVTQKG 321

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE + DKYH V+KF+  TG+Q K+     SYT+ F++ L+  A+ D+ ++AI AA
Sbjct: 322 HGYKPAESSGDKYHAVSKFNVITGEQTKAPPGPPSYTSVFSKELLKRAKEDEKIIAITAA 381

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F   FP R FDVGIAEQHAVTFAAGLA EG++PFCAIYSSF+QR YDQV+H
Sbjct: 382 MPSGTGLDKFQETFPDRYFDVGIAEQHAVTFAAGLATEGMRPFCAIYSSFLQRGYDQVMH 441

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G++D+ ++ CLP++V+MAPSDE EL HM ATAA
Sbjct: 442 DVVLQKLPVRFAIDRAGLVGADGATHAGTYDIAYLGCLPDIVLMAPSDEVELMHMTATAA 501

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-GER-------VALLGYGTA 597
           A D+ P  FR+PRG G+G++LP  N+   LE+GKGRI+ E G +       +A+L +G  
Sbjct: 502 AFDEGPIAFRFPRGPGLGLQLP--NQAEILEIGKGRIVQEMGNQTGKEKGGIAILSFGAR 559

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +  CL A+  L   G   T+ DARF KPLD  LI  LA++H+VLIT+EEGS GGFG++V+
Sbjct: 560 LTECLKAAETLTEQGYSPTIIDARFAKPLDTDLINQLARNHKVLITIEEGSRGGFGAYVM 619

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           + LA +GLLD  V++RP+V+PD +I H + A Q  +AGL  + I       +G
Sbjct: 620 EHLANNGLLD-NVRFRPMVIPDFFIHHNTQAAQYTEAGLDSASIVKVALKAMG 671


>gi|255261415|ref|ZP_05340757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
 gi|255103750|gb|EET46424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
          Length = 619

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/640 (55%), Positives = 449/640 (70%), Gaps = 25/640 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +LD I  P  +K LS  +L QLADELR +VI  V+ TGGHLGSSLGV+ELTVALH VF
Sbjct: 2   TSILDNIAGPSDLKGLSDPDLSQLADELRTEVIEAVATTGGHLGSSLGVVELTVALHAVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+D+++WDVGHQ YPHK+LTGRR +M T+RQ  G+SGFTKR+ES++D FG  HSSTSI
Sbjct: 62  DTPRDKLIWDVGHQCYPHKVLTGRRAQMKTLRQEGGISGFTKRTESDFDPFGAAHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG  V RD+     + VA+IGDG+++AG AYEAMNNAG     M VILNDN ++S+ 
Sbjct: 122 SAALGFTVARDMGQPTGDAVAIIGDGSISAGMAYEAMNNAGAEGRRMFVILNDN-EMSIA 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGA+S  +SRL ++ PL             + GP+ + A +  E   G  
Sbjct: 181 --------PPVGAMSQYMSRL-ADTPL----------GAALPGPLRDHARRARELVTGRT 221

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           + SG T+FEELG  Y+GP++GH++D L+A+L  V+ T+ TGPVLIH  T KG+GY  AE 
Sbjct: 222 TSSG-TMFEELGFEYVGPINGHDMDQLLAVLRSVR-TRATGPVLIHCCTVKGKGYAPAEN 279

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV+KFD ++G Q KS +   SYT+ F  AL   A  D  +V I AAM  GTG++
Sbjct: 280 SADKYHGVSKFDVSSGAQAKSGSNAPSYTSVFGHALTRIAARDSKIVGITAAMPSGTGMD 339

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F   FP R FDVGIAEQH VTFAAGLA  GLKPFCAIYS+F+QR YDQ+VHDV LQ LP
Sbjct: 340 IFADAFPRRVFDVGIAEQHGVTFAAGLAAGGLKPFCAIYSTFLQRGYDQIVHDVALQNLP 399

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADG TH G+FDV +++ LPNM VMA SDEAEL HMVATA A D  P  
Sbjct: 400 VRFAIDRAGLVGADGATHAGAFDVGYLSALPNMTVMAASDEAELVHMVATAVAHDAGPIA 459

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G G  +P  + G  LE+GKGR++ EG  VA+L +G  +   L ++ ++ + G+
Sbjct: 460 FRYPRGTGTGAAVP--DLGEVLEIGKGRVVREGADVAILSFGAHLSESLKSADMMAAQGV 517

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLDHALIR L K H+ LIT+E+GS GGFG+ V+ ++A +GLLDG +  R
Sbjct: 518 TATVADARFAKPLDHALIRQLVKHHKALITIEQGSQGGFGAMVLHYMAGEGLLDGDIAVR 577

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
            + LPDR+ID  +P    A AGLT + IAAT    + +TR
Sbjct: 578 TMTLPDRFIDQAAPDAMYADAGLTATDIAATAIQAV-KTR 616


>gi|329851865|ref|ZP_08266546.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
           C19]
 gi|328839714|gb|EGF89287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
           C19]
          Length = 639

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/639 (56%), Positives = 450/639 (70%), Gaps = 14/639 (2%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TP+LD+   P  ++ LS  ++K LADE+RA+ I  VSKTGGHLGS+LGV+ELTVALH+
Sbjct: 3   PETPVLDSFQTPQDIRRLSPTQVKALADEVRAETIDVVSKTGGHLGSALGVVELTVALHH 62

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
            F  P+D ++WDVGHQ YPHKILTGRRD++ ++RQ  GLSGFTKRSES YD FG  H++T
Sbjct: 63  TFETPRDILIWDVGHQCYPHKILTGRRDRIRSLRQGGGLSGFTKRSESPYDPFGAAHAAT 122

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG    RD KG  + V+AVIGDG+M+AG AYEAMNNA     ++ VILNDN  +S
Sbjct: 123 SISAALGFCAARDQKGEDHKVIAVIGDGSMSAGMAYEAMNNAAETTRNLTVILNDN-DMS 181

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVG +S+ L+ L S    + +R   K V +++   + EL  K +E++R 
Sbjct: 182 IA--------PPVGGMSAYLANLVSGGAYQAVRRWGKSVAERLPRSIFELVRKSEEFSRT 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            ++G   T FEELG YY+GP+DGHN++ L  +L  V+  +   PVL+HVVT+KG+GY  A
Sbjct: 234 YVTGG--TFFEELGFYYVGPIDGHNMEHLCQVLRRVREIRDR-PVLVHVVTQKGKGYEPA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E AADKYHGVAKFD  TG+Q K  +   SYT  FA  LI +A  D  +VAI AAM  GTG
Sbjct: 291 ENAADKYHGVAKFDVITGEQSKPKSNAPSYTEVFASELIKQARRDDRIVAITAAMPSGTG 350

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FPTRC+DVGIAEQHAVTFAAGLA EG+KPFCAIYS+F+QR YDQV HDV LQ 
Sbjct: 351 LDRFAEVFPTRCYDVGIAEQHAVTFAAGLAAEGMKPFCAIYSTFLQRGYDQVAHDVSLQN 410

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVRFA+DRAGLVGADG TH G+FD+ ++  LP M++MA SDEAEL  M+ATA A DD P
Sbjct: 411 LPVRFAIDRAGLVGADGATHAGAFDIGYLGALPQMMIMAASDEAELAAMIATATAYDDGP 470

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S FRYPRG+G+GV +P  +   PL +GKGRI+ EG +VA+L  G  +Q  L A+ +L + 
Sbjct: 471 SAFRYPRGDGVGVTIP--DVAQPLAIGKGRIVREGSKVAILSLGARLQEALKAADMLAAR 528

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           GL  TVADARF KPLD  LI  LA+ HE LITVEEGS+GGFG  V+ +LA +G LD  +K
Sbjct: 529 GLSTTVADARFAKPLDKDLILQLARHHECLITVEEGSVGGFGGFVLHYLAGEGALDNALK 588

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            R L LPD Y D  S  +Q A+AGL  + I  T    LG
Sbjct: 589 IRTLTLPDVYQDQDSQTNQYAEAGLDAAGIVLTAVRALG 627


>gi|229597237|ref|YP_001756119.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 656

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/655 (56%), Positives = 462/655 (70%), Gaps = 26/655 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           + LLD +  P  ++ L   EL+ +AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 8   SALLDRVPSPSALRRLPESELQAVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 67

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKRSES YD FG  HSSTSI
Sbjct: 68  DTPDDRIVWDVGHQCYPHKILTERRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSI 127

Query: 194 SAGLGMAVGRDL-------KG---RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVI 243
           SA LGMAV RDL       KG   ++ N +AVIGDG+M+AG AYEA+NNAG L S +IVI
Sbjct: 128 SAALGMAVARDLDNATAKQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVI 187

Query: 244 LNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAA 303
           LNDN  +S+         PPVGA+S+ L+RL S    + LRE AK + K +   +++ AA
Sbjct: 188 LNDN-DMSIA--------PPVGAMSAYLARLASGGAYQSLRETAKQLGKLLPKALYQRAA 238

Query: 304 KVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTE 363
             +EYAR ++ G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V++ +  GP+L+HVVT+
Sbjct: 239 AAEEYARSLVVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQ 296

Query: 364 KGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 423
           KG+GY  AE +AD+YHGV KFD  +G Q K+     +YT  F E+LI  A+ D  VVAI 
Sbjct: 297 KGKGYAPAEASADRYHGVVKFDVVSGIQAKAKPNAPAYTRVFGESLIKAADADDKVVAIT 356

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
           AAM GGTG++LF +  P + FDVGIAEQHAVTFA GLA EG +PF AIYS+F+QRAYDQV
Sbjct: 357 AAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQV 416

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           VHDV LQ LPVRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT
Sbjct: 417 VHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVAT 476

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG--ERVALLGYGTAVQSC 601
           A A D  P   RYPRG G+GVELP   +G  L +GKGR++      RVALL  GT +   
Sbjct: 477 AHAHDTGPIALRYPRGEGVGVELP--ERGEVLAIGKGRVVRRDAEARVALLSLGTRLAEA 534

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA 661
           L A+  L   G+ +TVADARF KPLD ALI  LA+ HEVLITVEEGS GGFG+ V+  LA
Sbjct: 535 LKAADALAEQGVAVTVADARFAKPLDEALILDLARDHEVLITVEEGSRGGFGAMVLHLLA 594

Query: 662 QDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           + G LD G V+ R + LPD Y DH SP    A+AGL    I  T  + L + +++
Sbjct: 595 ERGALDAGGVRVRTMTLPDAYQDHDSPEKMYAEAGLDAKTIVRTALDTLPERKDS 649


>gi|393769991|ref|ZP_10358504.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           sp. GXF4]
 gi|392724572|gb|EIZ81924.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           sp. GXF4]
          Length = 628

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/640 (57%), Positives = 455/640 (71%), Gaps = 26/640 (4%)

Query: 78  DTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPK 137
           D +  P  ++ L   EL+ +AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF+ P 
Sbjct: 1   DRVPEPAALRQLPESELQAVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVFDTPD 60

Query: 138 DRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGL 197
           DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSES YD FG  HSSTSISA L
Sbjct: 61  DRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAAL 120

Query: 198 GMAVGRDL-------KGR---KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           GMAV RDL       KGR   + N +AVIGDG+M+AG AYEAMNNAG L S +IVILNDN
Sbjct: 121 GMAVARDLDADAAKAKGRGVKRRNAIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN 180

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
             +S+         PPVGA+S  L+RL S    + LRE AK + K +   +++ AA  +E
Sbjct: 181 -DMSIA--------PPVGAMSGYLARLASGGTYQSLRETAKQLGKLLPKALYQRAAAAEE 231

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           YAR ++ G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V++ +  GP+L+HVVT KG+G
Sbjct: 232 YARSLVVGGG-TMFEEMGFHYVGPVDGHNLDQLLPVLKNVRDAEH-GPILLHVVTRKGKG 289

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE +AD+YHGV KFD  +G Q K+     +YT  F E+LI  A+ D  VVAI AAM 
Sbjct: 290 YAPAEASADRYHGVVKFDVVSGVQAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMP 349

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
           GGTG++LF +  P + FDVGIAEQHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV
Sbjct: 350 GGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDV 409

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            LQ LPVRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVATA A 
Sbjct: 410 ALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAH 469

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAAS 605
           D  P   RYPRG G+GVELP   +G  L +GKGR++ +    RVA+L  GT +   L A+
Sbjct: 470 DSGPIALRYPRGEGVGVELP--ERGEALAIGKGRMVRQDAEARVAILSLGTRLSEALKAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 665
             L   G+ +TVADARF KPLD ALI  LA+SHEVLIT+EEGS GGFG+ V+  L++ G 
Sbjct: 528 DTLSDQGVAVTVADARFAKPLDEALILDLAQSHEVLITIEEGSRGGFGAMVLHLLSERGA 587

Query: 666 LD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 704
           LD G V+ R L LPD Y DH SP    A+AGL  + I  T
Sbjct: 588 LDAGRVRVRTLTLPDLYQDHDSPEKMYAEAGLDAATIVKT 627


>gi|229597238|ref|YP_001756649.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 664

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/649 (56%), Positives = 457/649 (70%), Gaps = 26/649 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           + LLD +  P  ++ L   EL+ +AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 8   SALLDRVPSPSALRRLPESELQAVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 67

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILT RRD++ T+RQ  GLSGFTKRSES YD FG  HSSTSI
Sbjct: 68  DTPDDRIVWDVGHQCYPHKILTERRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSI 127

Query: 194 SAGLGMAVGRDL-------KG---RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVI 243
           SA LGMAV RDL       KG   ++ N +AVIGDG+M+AG AYEA+NNAG L S +IVI
Sbjct: 128 SAALGMAVARDLDNATAKQKGGAQKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVI 187

Query: 244 LNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAA 303
           LNDN  +S+         PPVGA+S+ L+RL S    + LRE AK + K +   +++ AA
Sbjct: 188 LNDN-DMSIA--------PPVGAMSAYLARLASGGAYQSLRETAKQLGKLLPKALYQRAA 238

Query: 304 KVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTE 363
             +EYAR ++ G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V++ +  GP+L+HVVT+
Sbjct: 239 AAEEYARSLVVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQ 296

Query: 364 KGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 423
           KG+GY  AE +AD+YHGV KFD  +G Q K+     +YT  F E+LI  A+ D  VVAI 
Sbjct: 297 KGKGYAPAEASADRYHGVVKFDVVSGIQAKAKPNAPAYTRVFGESLIKAADADDKVVAIT 356

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
           AAM GGTG++LF +  P + FDVGIAEQHAVTFA GLA EG +PF AIYS+F+QRAYDQV
Sbjct: 357 AAMPGGTGIDLFGKAHPDKTFDVGIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQV 416

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           VHDV LQ LPVRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT
Sbjct: 417 VHDVALQNLPVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVAT 476

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG--ERVALLGYGTAVQSC 601
           A A D  P   RYPRG G+GVELP   +G  L +GKGR++      RVALL  GT +   
Sbjct: 477 AHAHDTGPIALRYPRGEGVGVELP--ERGEVLAIGKGRVVRRDAEARVALLSLGTRLAEA 534

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA 661
           L A+  L   G+ +TVADARF KPLD ALI  LA+ HEVLITVEEGS GGFG+ V+  LA
Sbjct: 535 LKAADALAEQGVAVTVADARFAKPLDEALILDLARDHEVLITVEEGSRGGFGAMVLHLLA 594

Query: 662 QDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           + G LD G V+ R + LPD Y DH SP    A+AGL    I  T    L
Sbjct: 595 ERGALDAGGVRVRTMTLPDAYQDHDSPEKMYAEAGLDAKTIVRTALATL 643


>gi|222634935|gb|EEE65067.1| hypothetical protein OsJ_20090 [Oryza sativa Japonica Group]
          Length = 638

 Score =  682 bits (1759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/569 (58%), Positives = 413/569 (72%), Gaps = 23/569 (4%)

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           V+EL +A+HYVFNAP D+ILWD G  TY HKILTGRR   HT++Q  GLSGFT R ESEY
Sbjct: 14  VVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEY 73

Query: 182 DCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           D FG GH   S+SAGLGMAV RDL GRKN +V VI +    AGQ YEAM +AG+LDS+M+
Sbjct: 74  DPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNMV 133

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           VILND++   LP A     +  + ALSSALS++QS++  R+ RE AKG++K  G  MHE 
Sbjct: 134 VILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHEF 192

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
           AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL+ +L+EV    +TGPVL+HV+
Sbjct: 193 AAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHVI 252

Query: 362 TEKGRG---------YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAE 412
           TE  +           P  E   D    + KF          +  +++Y   F E+LIAE
Sbjct: 253 TENEKDSGGEFNSEITPDEEGPPDSSQDILKF--------LENGLSRTYNDCFVESLIAE 304

Query: 413 AEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIY 472
           AE DK +V +H  MG    + LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I 
Sbjct: 305 AENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIP 364

Query: 473 SSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPS 532
           S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+PS
Sbjct: 365 STFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPS 424

Query: 533 DEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVGKGRILIEGERVA 590
           +E EL  MVATAA ++DRP CFRYP+G  +G    L  GN   PLE+GKG IL EG+ +A
Sbjct: 425 NEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGN---PLEIGKGEILAEGKEIA 481

Query: 591 LLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIG 650
            LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR L + H+ LITVEEG++G
Sbjct: 482 FLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTVG 541

Query: 651 GFGSHVVQFLAQDGLLDGTVKWRPLVLPD 679
           GFGSHV QF++ DGLLDG +KWRP+VLPD
Sbjct: 542 GFGSHVSQFISLDGLLDGKIKWRPIVLPD 570


>gi|50952770|gb|AAT90303.1| putative deoxyxylulose-5-phosphate synthase [uncultured
           proteobacterium eBACred25D05]
          Length = 647

 Score =  680 bits (1754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/627 (54%), Positives = 442/627 (70%), Gaps = 14/627 (2%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+LD ++ P  ++ LS  +L Q+A ELR +VI  VS+TGGHLGSSLGV+ELTVALH +F 
Sbjct: 8   PILDKVSGPEDLRKLSDADLDQVAKELRNEVIEVVSQTGGHLGSSLGVVELTVALHAIFK 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKI+TGRR +M  +RQ DG+SGFTKRSESEYD FG  HSSTSIS
Sbjct: 68  TPLDKLIWDVGHQCYPHKIITGRRKRMMGLRQKDGVSGFTKRSESEYDPFGAAHSSTSIS 127

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LG  +GR+L     + +AVIGDG+++AG AYEAMNNAG  +  + VILNDN ++S+  
Sbjct: 128 AALGFTMGRELGQTVGDCIAVIGDGSISAGMAYEAMNNAGAENKRLFVILNDN-EMSIA- 185

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGA+SS LS L  N    +L+ +A+ V   +   M + A +  +   GM  
Sbjct: 186 -------PPVGAMSSYLSGLYGNSAFHKLKTLAEEVEVHLPWAMRDGARRARQIVTGM-- 236

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEELG  Y+GP+DGHN+  L+++L   K  + TGPVLIHV T+KG GY  AE +
Sbjct: 237 HGQATLFEELGFDYLGPIDGHNMPQLLSVLRAAK-ARATGPVLIHVCTKKGCGYAPAENS 295

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
           +DKYHGV+KFD ATG Q K+ A   SYT+ F +AL  EAE D  +VA+ AAM  GTG+N 
Sbjct: 296 SDKYHGVSKFDIATGLQSKTPANAPSYTSIFGQALTIEAEADPRIVAVTAAMPSGTGVNA 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
             + FP R FDVGIAEQH VTFAAG+A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPV
Sbjct: 356 MAKVFPKRVFDVGIAEQHGVTFAAGMAASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
           RFA+DRAGLVGADG TH G+FDV +++ LPN VVMA +DEAEL HMV TAA  D  P  F
Sbjct: 416 RFAIDRAGLVGADGATHAGAFDVAYLSNLPNFVVMAAADEAELMHMVRTAAEYDAGPISF 475

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGNG+GVELP   +G  LE+GKGRI+ +G  +A+L +G  +     A+  L++ G+ 
Sbjct: 476 RYPRGNGLGVELP--KRGEVLEIGKGRIIQDGSDIAILSFGAHLSVVQEAAVALKNKGIS 533

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
           +T+ADARF KPLD  LI  L  +H  ++TVE+GS+GGF S V+ +L Q G L   +    
Sbjct: 534 VTIADARFAKPLDTDLIDELVNNHSAILTVEQGSVGGFSSLVLHYLMQSGQLRHGINIDS 593

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHI 701
           +VLPDR+ID  SPA+  + AG++  H+
Sbjct: 594 MVLPDRFIDQASPAEMYSDAGMSEGHV 620


>gi|339505914|ref|YP_004716612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
           149]
 gi|338759907|gb|AEI96370.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
           Och 149]
          Length = 645

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/642 (55%), Positives = 452/642 (70%), Gaps = 18/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP LD +  P  ++++S  EL+ +ADELRA+V+  VS+TGGHLGSSLGV+EL+VA+H VF
Sbjct: 6   TPTLDRVAGPADLRSMSDLELRTVADELRAEVVEAVSQTGGHLGSSLGVVELSVAIHAVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+D+++WDVGHQ YPHKILTGRR +M T+RQ  G+SGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPRDKLVWDVGHQCYPHKILTGRRKQMPTLRQGGGISGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG  V RD+     + VAVIGDG+++AG AYEA+NNAG+    M VILNDN ++S+ 
Sbjct: 126 SAALGFTVSRDMGQPTGDAVAVIGDGSISAGMAYEALNNAGHEGRRMFVILNDN-EMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNR---PLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
                   PPVGA+SS LS L       P   L  +A+G+ +    P+ + A +  E   
Sbjct: 185 --------PPVGAMSSYLSSLSELSRVGPFGGLVAIAEGMEQLAPKPVRDGARRARELVT 236

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G+   S  T FEELG  YIGP+DGH+++ L+++L   K  + TGPVLIH  T KG+GY  
Sbjct: 237 GL--ESRGTFFEELGFDYIGPIDGHDMEQLLSVLRGAK-ARATGPVLIHCCTVKGKGYAP 293

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE +ADKYHGV+KF+  TG Q K+ A   SYT  F +AL + AE D  VVA+ AAM  GT
Sbjct: 294 AEGSADKYHGVSKFNVGTGVQAKAKANAPSYTAVFGDALTSLAEEDPSVVAVTAAMPSGT 353

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G++   +RFP R FDVGIAEQH VTFAA +A  GLKPFCAIYS+F+QR YDQ+VHDV LQ
Sbjct: 354 GVDRMAKRFPNRVFDVGIAEQHGVTFAAAMAATGLKPFCAIYSTFLQRGYDQIVHDVALQ 413

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFA+DRAGLVGADG TH GSFD+ ++  LP MVVMA +DEAEL HMVATA A +D 
Sbjct: 414 GLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDG 473

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAASALLE 609
           P  FRYPRGNG GV LP    G  LE+GKGR++ EG+  VA+L  GT +  C AA+ +LE
Sbjct: 474 PIAFRYPRGNGTGVPLP--EMGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARMLE 531

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G+  T+ADARF KPLD  LI +L ++H+ LITVE+G++GGFG+ V+Q +A +GLLD  
Sbjct: 532 AEGINATIADARFAKPLDMELIANLVQNHKALITVEQGAMGGFGAMVLQSMAAEGLLDLG 591

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            K R + LPDR+ID  SP +   +AGL    I   V  +LG+
Sbjct: 592 CKLRTICLPDRFIDQASPTEMYREAGLDTLGIVEQVTRVLGR 633


>gi|170656381|gb|ACB25436.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
           JCM 2831]
          Length = 626

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/632 (57%), Positives = 450/632 (71%), Gaps = 26/632 (4%)

Query: 97  LADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTG 156
           +AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF+ P DRI+WDVGHQ YPHKILT 
Sbjct: 1   MADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVFDTPDDRIVWDVGHQCYPHKILTE 60

Query: 157 RRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG-- 207
           RRD++ T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KG  
Sbjct: 61  RRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGA 120

Query: 208 -RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGA 266
            ++ N +AVIGDG+M+AG AYEA+NNAG L S +IVILNDN  +S+         PPVGA
Sbjct: 121 QKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPVGA 171

Query: 267 LSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGL 326
           +S+ L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G 
Sbjct: 172 MSAYLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGF 230

Query: 327 YYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDP 386
           +Y+GPVDGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE +AD+YHGV KFD 
Sbjct: 231 HYVGPVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDV 289

Query: 387 ATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDV 446
            +G Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDV
Sbjct: 290 VSGIQAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDV 349

Query: 447 GIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGA 506
           GIAEQHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGA
Sbjct: 350 GIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGA 409

Query: 507 DGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL 566
           DG TH G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVEL
Sbjct: 410 DGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRGEGVGVEL 469

Query: 567 PPGNKGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 624
           P   +G  L +GKGR++      RVALL  GT +   L A+  L   G+ +TVADARF K
Sbjct: 470 P--ERGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVADARFAK 527

Query: 625 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYID 683
           PLD ALI  LA+ HEVLITVEEGS GGFG+ V+  LA+ G LD G V+ R + LPD Y D
Sbjct: 528 PLDEALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTLPDAYQD 587

Query: 684 HGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           H SP    A+AGL    I  T  + L + +++
Sbjct: 588 HDSPEKMYAEAGLDAKTIVRTALDTLPERKDS 619


>gi|110677515|ref|YP_680522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
 gi|118595484|sp|Q16DV7.1|DXS1_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|109453631|gb|ABG29836.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter
           denitrificans OCh 114]
          Length = 645

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/642 (55%), Positives = 450/642 (70%), Gaps = 18/642 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP LD +  P  ++++S  EL+ +ADELRA+V+  VS+TGGHLGSSLGV+EL+VA+H VF
Sbjct: 6   TPTLDRVAGPADLRSMSDTELRNVADELRAEVVEAVSQTGGHLGSSLGVVELSVAIHAVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+D+++WDVGHQ YPHKILTGRR +M T+RQ  G+SGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPRDKLVWDVGHQCYPHKILTGRRKQMPTLRQGGGISGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG  + RD+     + VAVIGDG+++AG AYEAMNNAG+    M VILNDN ++S+ 
Sbjct: 126 SAALGFTISRDMGQPTGDAVAVIGDGSISAGMAYEAMNNAGHEGRRMFVILNDN-EMSIA 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNR---PLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
                   PPVGA+SS LS L       P   L  +A+G+ +    P+ + A +  E   
Sbjct: 185 --------PPVGAMSSYLSSLSELSRAGPFGGLVAIAEGMEQLAPKPVRDGARRARELVT 236

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G+   +  T FEELG  YIGP+DGH++  L+++L   K  + TGPVLIH  T KG+GY  
Sbjct: 237 GL--ENRGTFFEELGFDYIGPIDGHDMAQLLSVLRGAK-ARATGPVLIHCCTVKGKGYAP 293

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE +ADKYHGV+KFD  TG Q K+ A   SYT  F +AL   AE D  VVA+ AAM  GT
Sbjct: 294 AEGSADKYHGVSKFDVGTGVQAKAKANAPSYTAVFGDALTTLAEEDPSVVAVTAAMPSGT 353

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G++   +RFP R FDVGIAEQH VTFAA +A  GLKPFCAIYS+F+QR YDQ+VHDV LQ
Sbjct: 354 GVDRMAKRFPNRVFDVGIAEQHGVTFAAAMAATGLKPFCAIYSTFLQRGYDQIVHDVALQ 413

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPVRFA+DRAGLVGADG TH GSFD+ ++  LP MVVMA +DEAEL HMVATA A +D 
Sbjct: 414 GLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDG 473

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAASALLE 609
           P  FRYPRGNG GV LP    G  LE+GKGR++ EG+  VA+L  GT +  C AA+ +LE
Sbjct: 474 PIAFRYPRGNGTGVPLP--ETGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARILE 531

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           + G+  T+ADARF KPLD ALI +L ++H+ LITVE+G++ GFG+ V+Q +A +GLLD  
Sbjct: 532 AEGINATIADARFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDLG 591

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            K R + LPDR+ID  +PA+    AGL    I   V  +LG+
Sbjct: 592 CKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIVEQVTRVLGR 633


>gi|170656911|gb|ACB25966.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
           JCM 2831]
          Length = 634

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/626 (57%), Positives = 445/626 (71%), Gaps = 26/626 (4%)

Query: 97  LADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTG 156
           +AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF+ P DRI+WDVGHQ YPHKILT 
Sbjct: 1   MADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVFDTPDDRIVWDVGHQCYPHKILTE 60

Query: 157 RRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG-- 207
           RRD++ T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KG  
Sbjct: 61  RRDRIRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGA 120

Query: 208 -RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGA 266
            ++ N +AVIGDG+M+AG AYEA+NNAG L S +IVILNDN  +S+         PPVGA
Sbjct: 121 QKRRNAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPVGA 171

Query: 267 LSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGL 326
           +S+ L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G 
Sbjct: 172 MSAYLARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGF 230

Query: 327 YYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDP 386
           +Y+GPVDGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE +AD+YHGV KFD 
Sbjct: 231 HYVGPVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDV 289

Query: 387 ATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDV 446
            +G Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDV
Sbjct: 290 VSGIQAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDV 349

Query: 447 GIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGA 506
           GIAEQHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGA
Sbjct: 350 GIAEQHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGA 409

Query: 507 DGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL 566
           DG TH G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVEL
Sbjct: 410 DGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRGEGVGVEL 469

Query: 567 PPGNKGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 624
           P   +G  L +GKGR++      RVALL  GT +   L A+  L   G+ +TVADARF K
Sbjct: 470 P--ERGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVADARFAK 527

Query: 625 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYID 683
           PLD ALI  LA+ HEVLITVEEGS GGFG+ V+  LA+ G LD G V+ R + LPD Y D
Sbjct: 528 PLDEALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTLPDAYQD 587

Query: 684 HGSPADQLAQAGLTPSHIAATVFNIL 709
           H SP    A+AGL    I  T    L
Sbjct: 588 HDSPEKMYAEAGLDAKTIVRTALATL 613


>gi|356550766|ref|XP_003543755.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like, partial [Glycine max]
          Length = 478

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/485 (67%), Positives = 379/485 (78%), Gaps = 14/485 (2%)

Query: 239 DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 298
           D+I+ILNDN+QVSLPTAT+DGP PPVGALS AL+ L +N     LREVAKG+TKQIG   
Sbjct: 6   DLILILNDNEQVSLPTATIDGPAPPVGALSRALAXLNTNSKFHXLREVAKGITKQIGSRA 65

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
           HE A+K+D Y RGM  G+G+ LFEELGL+YIGPVD H++          K   T GP+LI
Sbjct: 66  HEFASKLDSYIRGMAGGAGACLFEELGLFYIGPVDSHDI---------XKGMPTLGPILI 116

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HV+TEKG+ Y  AE A DK HG  KFDP + KQ KS A TQ    YFAE+L AEAEVD+ 
Sbjct: 117 HVITEKGKRYHPAEVAPDKMHGAVKFDPKSRKQLKSKASTQ----YFAESLTAEAEVDEK 172

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGLA EGL  F AIYSSF+QR
Sbjct: 173 IVAIHAAMGGGTGLNLFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLNLFRAIYSSFLQR 232

Query: 479 AYDQV-VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
            YDQV  HDVDLQKLPVRFA+D AGLVGADGPTHCG+FD TFMACLPNMVVMAPSDE EL
Sbjct: 233 NYDQVRTHDVDLQKLPVRFALDAAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSDETEL 292

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
            HM+ATAAAIDDRPSCFRYPRGNGIG  LPP NKG P+++GKGRIL EG RVAL+GYGT 
Sbjct: 293 MHMIATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPMQIGKGRILKEGSRVALVGYGTM 352

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 657
           +QSC+  + +LE++G+  TVADARFCKPLD  L+  LA+ HE+LITVEEGSIGGFGSHV 
Sbjct: 353 IQSCMEVAKVLEAHGISTTVADARFCKPLDGDLMTRLAREHEILITVEEGSIGGFGSHVS 412

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
            FL  +GLLDG +KW  L LPDRYI+HGS  DQ+  AGL+ +HIA T  ++     ++  
Sbjct: 413 HFLGLNGLLDGNLKWLALTLPDRYINHGSQTDQIEMAGLSSNHIAVTALSLTNVHWDSRL 472

Query: 718 IMSFK 722
           ++S +
Sbjct: 473 LLSLQ 477


>gi|374669416|gb|AEZ55866.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 2 [Mitragyna
           speciosa]
          Length = 492

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/415 (74%), Positives = 365/415 (87%)

Query: 67  YHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELT 126
           +  ++PPTP+LDTINYPIHMKNLS  EL++LADELR ++++ VSKTG HL +SLGV ELT
Sbjct: 78  FTGEKPPTPILDTINYPIHMKNLSFEELERLADELREEIVYTVSKTGEHLSASLGVAELT 137

Query: 127 VALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGT 186
           VALH+VFN P D+I+WDVGHQTYPHKILTGRR +MHT+RQT GL+GF KR ES +D FG 
Sbjct: 138 VALHHVFNTPDDKIIWDVGHQTYPHKILTGRRSRMHTIRQTCGLAGFPKRDESVHDAFGA 197

Query: 187 GHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246
           GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGAMTAGQAYEAMNNAG+LDS++I++LND
Sbjct: 198 GHSSTSISAGLGMAVGRDLLGKANHVISVIGDGAMTAGQAYEAMNNAGFLDSNLIIVLND 257

Query: 247 NKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVD 306
           NKQVSLPTATLDGP  PVGALS AL+++QS+R LR+LRE AKGVTKQ+G   HE+AAKVD
Sbjct: 258 NKQVSLPTATLDGPAAPVGALSKALTKMQSSRKLRQLREAAKGVTKQLGNQAHEIAAKVD 317

Query: 307 EYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGR 366
            Y RG+++GSG++LFEELGLYYIGPVDGHN++DLV I ++VK+    GPVLIH++TEKG+
Sbjct: 318 SYVRGVVNGSGASLFEELGLYYIGPVDGHNIEDLVYIFKKVKSMPAPGPVLIHIMTEKGK 377

Query: 367 GYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           GYP AE A+DK HGV KFDP TGKQ KSS++T++YTTYFAE+L AEAE D  +VAIHAAM
Sbjct: 378 GYPPAEAASDKMHGVVKFDPQTGKQLKSSSKTKTYTTYFAESLAAEAEQDDKIVAIHAAM 437

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           GGGTGLN+F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YD
Sbjct: 438 GGGTGLNIFQKRFPHRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYD 492


>gi|294676253|ref|YP_003576868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
           1003]
 gi|141323|sp|P26242.1|DXS_RHOCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|46140|emb|CAA77557.1| 641 aa (68 kD) gene product of ORF641 [Rhodobacter capsulatus]
 gi|294475073|gb|ADE84461.1| 1-deoxy-D-xylulose-5-phosphate synthase-1 [Rhodobacter capsulatus
           SB 1003]
          Length = 641

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/635 (55%), Positives = 441/635 (69%), Gaps = 18/635 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP LD +  P  +K +SI +L  LA E+R +++  VS+TGGHLGSSLGV+ELTVALH VF
Sbjct: 8   TPHLDRVTGPADLKAMSIADLTALASEVRREIVEVVSQTGGHLGSSLGVVELTVALHAVF 67

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N+P D+++WDVGHQ YPHKILTGRR +M T+RQ  G+SGF KRSES +D FG GHSSTSI
Sbjct: 68  NSPGDKLIWDVGHQCYPHKILTGRRSRMLTLRQAGGISGFPKRSESPHDAFGAGHSSTSI 127

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG AVGR+L     + +A+IGDG++TAG AYEA+N+AG+L S M VILNDN  +S+ 
Sbjct: 128 SAALGFAVGRELGQPVGDTIAIIGDGSITAGMAYEALNHAGHLKSRMFVILNDN-DMSIA 186

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL   L+ +    P   L+  A+G+   + GP+ + A +    AR M+
Sbjct: 187 --------PPVGALQHYLNTIARQAPFAALKAAAEGIEMHLPGPVRDGARR----ARQMV 234

Query: 314 SG--SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           +    G+TLFEELG  YIGPVDGH++ +LV  L  V   + +GPVLIHV T KG+GY  A
Sbjct: 235 TAMPGGATLFEELGFDYIGPVDGHDMAELVETLR-VTRARASGPVLIHVCTTKGKGYAPA 293

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E A DK HGV+KFD  TGKQ KS     +YT  F E L  EA  D+ +VA+ AAM  GTG
Sbjct: 294 EGAEDKLHGVSKFDIETGKQKKSIPNAPNYTAVFGERLTEEAARDQAIVAVTAAMPTGTG 353

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L++  +RFP R FDVGIAEQHAVTFAAG+A  GLKPF A+YSSF+QR YDQ+VHDV LQ 
Sbjct: 354 LDIMQKRFPRRVFDVGIAEQHAVTFAAGMAAAGLKPFLALYSSFVQRGYDQLVHDVALQN 413

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPVR  +DRAGLVG DG TH G+FDV+ +A LPN  VMA +DEAEL HMV TAAA D  P
Sbjct: 414 LPVRLMIDRAGLVGQDGATHAGAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHDSGP 473

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G GVE+P   +G  LE+GKGR++ EG  VA+L +G  +   L A+ +LE+ 
Sbjct: 474 IALRYPRGEGRGVEMP--ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAE 531

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 671
           G+  TVADARFC+PLD  LI  L + H  LIT+E+G++GGFG+ V+ +LA+ G L+    
Sbjct: 532 GVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRA 591

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
            R + LPD YIDHGSP +  A AGLT + I  T  
Sbjct: 592 IRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTAL 626


>gi|55295806|dbj|BAD67657.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 1 [Oryza sativa
           Japonica Group]
 gi|215768492|dbj|BAH00721.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 565

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/563 (57%), Positives = 406/563 (72%), Gaps = 23/563 (4%)

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           V+EL +A+HYVFNAP D+ILWD G  TY HKILTGRR   HT++Q  GLSGFT R ESEY
Sbjct: 14  VVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEY 73

Query: 182 DCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           D FG GH   S+SAGLGMAV RDL GRKN +V VI +    AGQ YEAM +AG+LDS+M+
Sbjct: 74  DPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNMV 133

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           VILND++   LP A     +  + ALSSALS++QS++  R+ RE AKG++K  G  MHE 
Sbjct: 134 VILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHEF 192

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
           AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL+ +L+EV    +TGPVL+HV+
Sbjct: 193 AAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHVI 252

Query: 362 TEKGRG---------YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAE 412
           TE  +           P  E   D    + KF          +  +++Y   F E+LIAE
Sbjct: 253 TENEKDSGGEFNSEITPDEEGPPDSSQDILKF--------LENGLSRTYNDCFVESLIAE 304

Query: 413 AEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIY 472
           AE DK +V +H  MG    + LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I 
Sbjct: 305 AENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIP 364

Query: 473 SSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPS 532
           S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+PS
Sbjct: 365 STFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPS 424

Query: 533 DEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVGKGRILIEGERVA 590
           +E EL  MVATAA ++DRP CFRYP+G  +G    L  GN   PLE+GKG IL EG+ +A
Sbjct: 425 NEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGN---PLEIGKGEILAEGKEIA 481

Query: 591 LLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIG 650
            LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR L + H+ LITVEEG++G
Sbjct: 482 FLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTVG 541

Query: 651 GFGSHVVQFLAQDGLLDGTVKWR 673
           GFGSHV QF++ DGLLDG +K R
Sbjct: 542 GFGSHVSQFISLDGLLDGKIKVR 564


>gi|297605162|ref|NP_001056773.2| Os06g0142900 [Oryza sativa Japonica Group]
 gi|255676709|dbj|BAF18687.2| Os06g0142900 [Oryza sativa Japonica Group]
          Length = 562

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/558 (58%), Positives = 406/558 (72%), Gaps = 17/558 (3%)

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           V+EL +A+HYVFNAP D+ILWD G  TY HKILTGRR   HT++Q  GLSGFT R ESEY
Sbjct: 14  VVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEY 73

Query: 182 DCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           D FG GH   S+SAGLGMAV RDL GRKN +V VI +    AGQ YEAM +AG+LDS+M+
Sbjct: 74  DPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNMV 133

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           VILND++   LP A     +  + ALSSALS++QS++  R+ RE AKG++K  G  MHE 
Sbjct: 134 VILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHEF 192

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
           AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL+ +L+EV    +TGPVL+HV+
Sbjct: 193 AAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHVI 252

Query: 362 TE--KGRGYPYAEKAADKYHGVAKFDPATGKQ----FKSSARTQSYTTYFAEALIAEAEV 415
           TE  K  G  +  +      G     P    Q    F  +  +++Y   F E+LIAEAE 
Sbjct: 253 TENEKDSGGEFNSEITPDEEG-----PPDSSQDILKFLENGLSRTYNDCFVESLIAEAEN 307

Query: 416 DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF 475
           DK +V +H  MG    + LF  RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I S+F
Sbjct: 308 DKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTF 367

Query: 476 MQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEA 535
           +QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+ G FD+TFM+CLPNM+VM+PS+E 
Sbjct: 368 LQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNED 427

Query: 536 ELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVGKGRILIEGERVALLG 593
           EL  MVATAA ++DRP CFRYP+G  +G    L  GN   PLE+GKG IL EG+ +A LG
Sbjct: 428 ELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGN---PLEIGKGEILAEGKEIAFLG 484

Query: 594 YGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFG 653
           YG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR L + H+ LITVEEG++GGFG
Sbjct: 485 YGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTVGGFG 544

Query: 654 SHVVQFLAQDGLLDGTVK 671
           SHV QF++ DGLLDG +K
Sbjct: 545 SHVSQFISLDGLLDGKIK 562


>gi|339320004|ref|YP_004679699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
           mitochondrii IricVA]
 gi|338226129|gb|AEI89013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
           mitochondrii IricVA]
          Length = 624

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/635 (51%), Positives = 436/635 (68%), Gaps = 15/635 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  ++ P  +K L I +LK L+DE+R  +I   S+ GGHLG+SLGV+ELTVALH++F+ 
Sbjct: 3   LLGRVSLPFDLKGLKIEDLKVLSDEIREMIIKIASEKGGHLGASLGVVELTVALHHIFDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D ++WDVGHQ YPHKILTGR+D M T+RQ  G++GFTKR+ES YD FG GHSSTSISA
Sbjct: 63  PEDILIWDVGHQAYPHKILTGRKDLMSTIRQPGGIAGFTKRNESIYDPFGAGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG A  RD+K + N+V+AVIGDGAM+AG A+EA+NNA  L++ M+VILNDNK       
Sbjct: 123 ALGFAAARDIKKQNNHVIAVIGDGAMSAGMAFEALNNASMLNTKMLVILNDNKM------ 176

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGA+SS L++L S+R   + R +AK        P  E   K  +     ++ 
Sbjct: 177 ---SIAPAVGAMSSYLAKLLSSRQYYKARNIAKNALHYT--PFFEKVVKNVQKCTKRLA- 230

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVK-NTKTTGPVLIHVVTEKGRGYPYAEKA 374
           +GS  FEE+G +YIGPV GH++D L+ +L  ++ N +   P+L+H+ TEKGRG+   EK+
Sbjct: 231 TGSNFFEEIGFHYIGPVGGHSLDQLIPVLRNIRDNDQVNKPILLHIRTEKGRGFDSPEKS 290

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
            + YH V  FD  T  Q K      SY+  FA  L   A+ +K+VVAI AAM  GTGL+L
Sbjct: 291 LESYHAVLPFDLQTKIQKKPEKSYLSYSKVFASTLTKIAKKNKEVVAITAAMPSGTGLDL 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
            ++  P + +DVGIAEQHAVTFAAGLA  G KPF AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 351 MIKELPDQVYDVGIAEQHAVTFAAGLAAAGTKPFVAIYSTFLQRAYDQIIHDVAIQSLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
           RF +DRAGLVGADGPTH GSFD+ ++  LPN + MAPSDEAEL  MV TA  I+  PS  
Sbjct: 411 RFMLDRAGLVGADGPTHAGSFDLAYLCNLPNFICMAPSDEAELAKMVFTAYQINHCPSAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYP+     +E     +  PLE+GKGR++ +GER+A+L  GT +Q C+  S +L+ +G  
Sbjct: 471 RYPKAKTNSIEF--NYELEPLEIGKGRVIQKGERIAILSLGTRLQECIKTSEMLKKDGFD 528

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
           +T+ADARF KP+D  LIR LA SH++L+TVEEG+IGGFGS V QFL  DGLLDG +K+R 
Sbjct: 529 ITIADARFAKPIDTELIRDLASSHDILLTVEEGAIGGFGSSVAQFLLNDGLLDGKLKFRL 588

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           L LPD +I+  +      +AGL    +  T+ N+L
Sbjct: 589 LCLPDYFIEQNTVQQMYEEAGLNTRDMCQTIKNLL 623


>gi|260574952|ref|ZP_05842954.1| deoxyxylulose-5-phosphate synthase [Rhodobacter sp. SW2]
 gi|259022957|gb|EEW26251.1| deoxyxylulose-5-phosphate synthase [Rhodobacter sp. SW2]
          Length = 632

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/643 (54%), Positives = 443/643 (68%), Gaps = 23/643 (3%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P TP+LD I  P  +  LS  +L  LA E+RA+VI  VS+TGGHLGSSLGV+EL VA+H 
Sbjct: 4   PATPILDRIAGPADLHALSDAQLALLAKEVRAEVISVVSETGGHLGSSLGVVELAVAIHA 63

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P+D+++WDVGHQ YPHKILTGRRD+M ++RQ  G+SGFTKRSESEYD FG  HSST
Sbjct: 64  VFDTPRDKLIWDVGHQCYPHKILTGRRDRMRSLRQGGGISGFTKRSESEYDPFGAAHSST 123

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LG AV RDL       +AVIGDG++TAG AYEAMNNAG +   + VILNDN  +S
Sbjct: 124 SISAALGFAVARDLGMPTGEAIAVIGDGSITAGMAYEAMNNAGDMHKRLFVILNDN-DMS 182

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVGA+S  L++L +  P   LR  A+G+   + GP+ + A +    AR 
Sbjct: 183 IA--------PPVGAMSRYLNQLNNGAPFAALRAAAEGIEASLPGPLRDGARR----ARQ 230

Query: 312 MISG--SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +I+G   G TLFEELG  YIGP+DGH++  ++A L   +  + TGPV+IH +T KG+GYP
Sbjct: 231 LITGIPGGGTLFEELGFTYIGPIDGHDMAQVLATLRTAR-ARATGPVMIHALTVKGKGYP 289

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE A DKYHGV +FD  +G Q KS +   SYT  F  AL   A +D  +VA+ AAM  G
Sbjct: 290 PAEHALDKYHGVGRFDVESGTQAKSKSNAPSYTGVFGTALANAAALDTRIVAVTAAMPSG 349

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TG+++   +FP R FDVGIAEQH VTFAA +A  GL+PF AIYS+F+QR YDQ+VHDV L
Sbjct: 350 TGVDIMAAKFPARVFDVGIAEQHGVTFAAAMAAAGLRPFVAIYSTFLQRGYDQIVHDVAL 409

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPVRFA+DRAGLVG DG TH G+FDV F+A LP MVVMA  DEA+L HMVATAAA DD
Sbjct: 410 QGLPVRFAIDRAGLVGQDGATHAGAFDVGFLADLPGMVVMAAGDEADLVHMVATAAAYDD 469

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P  FRYPRG G GVE+P  + G  L +GKGR+L +G+ +ALL +G  +  CL A+ LLE
Sbjct: 470 GPIAFRYPRGEGRGVEVP--SPGEILPIGKGRVLRQGDDLALLSFGAHLGECLIAADLLE 527

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGT 669
           ++G+ +TVADARF KPLD  LI  L + H+ +ITVE+GS GGF + V+ +LA  G  D  
Sbjct: 528 ADGISVTVADARFAKPLDTDLITQLVRHHKAVITVEQGSAGGFAAQVLHYLANSGGFDRG 587

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
              R L LPDR+I+  SPA     AG+T   I      +L QT
Sbjct: 588 AVVRTLTLPDRFIEQASPAAMYLDAGMTAQDI-----RLLAQT 625


>gi|163760422|ref|ZP_02167504.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
 gi|162282373|gb|EDQ32662.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
          Length = 675

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/629 (55%), Positives = 430/629 (68%), Gaps = 14/629 (2%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TP+LD I  P  ++ +S  +L +LADELR D I  V+ TGGHLGS+LGV+ELTVA+H VF
Sbjct: 36  TPILDRIKSPEALRQMSDADLVRLADELRRDTIAKVAATGGHLGSTLGVVELTVAIHAVF 95

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+D+++WDVGHQ Y HKILTGRR+ M T+RQ  GLSGFTKR+ESEYD FG  HSSTSI
Sbjct: 96  DTPRDKLIWDVGHQAYAHKILTGRREAMATLRQDGGLSGFTKRAESEYDPFGAAHSSTSI 155

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLG A  R       + +AVIGDGAM+AG AYEAMNNAG +   + VILNDN+    P
Sbjct: 156 SAGLGFATARSFGFGDGDAIAVIGDGAMSAGMAYEAMNNAGTMGKRLFVILNDNEMSISP 215

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
           +         VGA S  LS L +  P   +  + +     +  P    AA+  + A G +
Sbjct: 216 S---------VGAFSKHLSALCTQAPAIGMDVMMRKAASMLPEPFKTGAARARQ-AVGAL 265

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
           +G+ S+LFE +G  YIGPVDGH++  L+AIL  V+N    GPVLIH +T KG GY  AE 
Sbjct: 266 AGT-SSLFEHMGFSYIGPVDGHDLPQLLAILRTVRNV-ADGPVLIHAITRKGAGYAPAEN 323

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
           +ADKYHGV  FD  TG   KS     +YT  FA+AL  EA+ D  VVAI AAM  GTGL+
Sbjct: 324 SADKYHGVGSFDAETGALSKSKPSAPAYTKVFAKALCDEADRDPGVVAITAAMASGTGLD 383

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F +  P R FDVGIAEQHAVTFAAGLA  G+KPFCAIYS+F+QRAYDQ+VHDV +Q LP
Sbjct: 384 VFSQAHPERMFDVGIAEQHAVTFAAGLAAAGMKPFCAIYSTFLQRAYDQIVHDVAIQGLP 443

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           VRFA+DRAGLVGADGPTH G+FDV +++ LP   VMA +DEAEL HMVATA A D  P  
Sbjct: 444 VRFAIDRAGLVGADGPTHAGAFDVAYLSNLPGFTVMAAADEAELVHMVATATAHDSGPIA 503

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
           FRYPRG G GV LP   +G P+ +GKGR++ EG  +A L +GT +  C  A+ +L + GL
Sbjct: 504 FRYPRGEGTGVALP--ERGTPIPIGKGRVIREGRDIAFLSFGTRLGECEKAADILAARGL 561

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 673
             TVADARF KPLD  LI  LA SH+ LITVEEG+ GGFG+ V++ LA  G LDG+   R
Sbjct: 562 SATVADARFAKPLDIELIERLASSHDALITVEEGAGGGFGARVLEHLAAAGRLDGSFAIR 621

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIA 702
            L LPD +  H SP+    ++GL   H+A
Sbjct: 622 TLTLPDHFEAHASPSVMYERSGLAAPHLA 650


>gi|61656095|gb|AAX49358.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Zea mays]
          Length = 424

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/423 (74%), Positives = 361/423 (85%), Gaps = 1/423 (0%)

Query: 297 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 356
           P HE+AAKVDEYARGMIS SGS+LFEELGLYYIGPVDGH V+DLV I E+VK+    GPV
Sbjct: 1   PTHEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPV 60

Query: 357 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 416
           LIH+VTEKG+GYP AE AAD+ HGV KF+PATG+Q KS + T SYT YFAE+LI EAE D
Sbjct: 61  LIHIVTEKGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESD 120

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
           + VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+
Sbjct: 121 EKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 180

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QR YDQVVHDVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDV +MACLPNMVVMAP+DEAE
Sbjct: 181 QRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAE 240

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYG 595
           L HMVATAAAIDDRPSCFR+PRGNG+G  LPPGNKG+ LEVG+GR+L+ G  RVALLGYG
Sbjct: 241 LMHMVATAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGYG 300

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 655
             VQ+CL A+  L+ + + +T ADARFCKPLD ALIR LA  HEVLIT EEGSIGGFGSH
Sbjct: 301 AMVQACLKAAEALKEHDVYVTAADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGSH 360

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           V  +L+  GLLDG +K R + LPDRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA
Sbjct: 361 VAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLEA 420

Query: 716 LEI 718
           +++
Sbjct: 421 MQL 423


>gi|349700050|ref|ZP_08901679.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 575

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/572 (57%), Positives = 415/572 (72%), Gaps = 30/572 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 17  PQLDRVRAPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 77  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 136

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 137 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 196

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 197 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 247

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YYIGPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 248 DEYARGIMTGG--TLFEELGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKG 305

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 306 HGYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAA 365

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 366 MPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 425

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ 
Sbjct: 426 DVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSI 485

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ELP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 486 AFDEGPIGLRYPRGAGLGLELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPR 543

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHA 629
           ++  L A+ +L + GL  TVADARF KP+D A
Sbjct: 544 LEDALKAADMLAAQGLSPTVADARFAKPIDTA 575


>gi|349700982|ref|ZP_08902611.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 578

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/572 (57%), Positives = 415/572 (72%), Gaps = 30/572 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P LD +  P  M+NLS+ +LKQLA+ELR++ I  VS TGGHLG+SLGV+ELTVALH VF+
Sbjct: 20  PQLDRVRMPHDMRNLSVEQLKQLAEELRSETIDAVSTTGGHLGASLGVVELTVALHAVFD 79

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRR+++ T+RQ  GLSGFT+RSESEYD FG  HSSTSIS
Sbjct: 80  TPDDRVIWDVGHQAYPHKILTGRRERIRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSIS 139

Query: 195 AGLGMAVGRDLKG------RKNNVVAVIGDGAMTAGQAYEAMNNAGYLD---SDMIVILN 245
           AGLGMAV   L+       R+ NV+AVIGDG+++AG AYEAMNNA +       +IV+LN
Sbjct: 140 AGLGMAVAHHLRAEEDPSYRERNVIAVIGDGSISAGMAYEAMNNASHCGPGAERLIVVLN 199

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN ++S+         PPVGA+S+ LSRL S+R    LRE+A  + K++ G +   A K 
Sbjct: 200 DN-EMSI--------APPVGAMSNYLSRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKA 250

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           DEYARG+++G   TLFEELG YYIGPVDGH+++ LV IL  +++ +  GPVL+HV+TEKG
Sbjct: 251 DEYARGIMTGG--TLFEELGFYYIGPVDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKG 308

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
            GY  AE A DKYH V+KF+  TG+Q K  +   SYT+ FA+ L+ +A  D  +V I AA
Sbjct: 309 HGYTPAESAGDKYHAVSKFNVVTGEQKKGPSGPPSYTSVFAKELVRQAATDDRIVTITAA 368

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL+ F + +P R FDVGIAEQHAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+H
Sbjct: 369 MPSGTGLDKFAKAYPDRFFDVGIAEQHAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMH 428

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQKLPVRFA+DRAGLVGADG TH G+FD+ ++ CLP M +MAPS+E EL HM AT+ 
Sbjct: 429 DVVLQKLPVRFAIDRAGLVGADGATHAGAFDIAYLGCLPGMTLMAPSNELELLHMTATSI 488

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER--------VALLGYGTA 597
           A D+ P   RYPRG G+G+ELP    G  LE+G+GRI+ E  R        +A+L  G  
Sbjct: 489 AFDEGPIGLRYPRGAGLGLELPAA--GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPR 546

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHA 629
           ++  L A+ +L + GL  TVADARF KP+D A
Sbjct: 547 LEDALKAADMLAAQGLSPTVADARFAKPIDTA 578


>gi|406707992|ref|YP_006758344.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB59]
 gi|406653768|gb|AFS49167.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB59]
          Length = 621

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 317/636 (49%), Positives = 438/636 (68%), Gaps = 18/636 (2%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            L  IN+P  +K L++ ELK L DELR   I  VSKTGGHLG+SLGV+ELTVALHYVF+ 
Sbjct: 3   FLSKINFPKDLKKLTLDELKILNDELRTFTIETVSKTGGHLGASLGVVELTVALHYVFDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+I+WDVGHQTYPHKI+TGR+ K+HT+R+ +GLSGFTKRSES YD FG  HSSTSISA
Sbjct: 63  PKDKIVWDVGHQTYPHKIITGRKRKIHTLRKKNGLSGFTKRSESIYDPFGAAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+AV RDL+ +  +V+++IGDGA++AG A+E +NN G+L  + ++ILNDN ++S+   
Sbjct: 123 NLGIAVARDLQKKSFDVISIIGDGAISAGMAFEGLNNIGHLSKNSLIILNDN-EMSIA-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGA+S  L  L S++    +R+V K  TK++   +   A K + Y +G +  
Sbjct: 180 ------KPVGAMSKYLVNLLSSKTYENIRDVVKNFTKKLPDEVGNFAKKTEGYLKGYL-- 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +G+TLFEELG+ YIGP+DGHN+D L+ + ++ K  +  GPV +H++TEKG+GY  AE + 
Sbjct: 232 TGNTLFEELGMNYIGPIDGHNLDLLIQLFQKYKEKELHGPVFLHIITEKGKGYAPAENSN 291

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           DK+HGV+ FD  TG Q KS  +T  YT+  +E L+  A+ DK V AI AAM  GTGL+ F
Sbjct: 292 DKFHGVSSFDIQTGVQNKSKDKT--YTSVISETLLKLAKKDKKVTAITAAMPSGTGLDKF 349

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
              +P R FDVGIAEQHAVTFA G+A E +KPF AIYS+F+QRAYDQVVHD+ +Q LPVR
Sbjct: 350 QELYPDRFFDVGIAEQHAVTFAGGMATESMKPFVAIYSTFLQRAYDQVVHDIAIQSLPVR 409

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DR+G VGADG TH GSFD+T++ CLPN +VMAPS   EL +M+  + +I+++PS  R
Sbjct: 410 FLIDRSGFVGADGATHAGSFDLTYLCCLPNFIVMAPSSGEELKNMLNFSLSINNKPSAIR 469

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL-ESNGLR 614
           YPR + +G E         + +GKG+++ +G+++A L  GT ++    AS L+ + N  +
Sbjct: 470 YPR-DTVG-EYNEKKSFEKITLGKGKVIQKGKKIAFLNLGTRLEQVKLASKLIKDKNKFQ 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
            T+ D RF KP+D  L+++L K+H++ ITVEE +IGGF S V  F      +   +K   
Sbjct: 528 TTIIDMRFAKPIDTQLLKTLLKNHDIFITVEENAIGGFSSQVNNFFLNQ--IKKQIKVLN 585

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             + D +ID     DQ +Q+G++P  I   V N+L 
Sbjct: 586 FFMKDEFIDQSDINDQYSQSGISPEEIYKKVSNLLN 621


>gi|134292966|ref|YP_001116702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
           G4]
 gi|134136123|gb|ABO57237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
           G4]
          Length = 646

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 436/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG+G GV        +P  +GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 481 RYPRGSGTGVATVKEFTALP--IGKGEVRRRSSQPEGKRVAILAFGTMVAPSLAAADELD 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 539 A-----TVANMRFVKPIDAALVRELAETHDYLVTVEEGCLMGGAGSACVEALMESGVIRP 593

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  L+Q GL  + IA ++
Sbjct: 594 VLQ---LGLPDQFIDHGDPAKLLSQCGLDSAGIAKSI 627


>gi|115358001|ref|YP_775139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           AMMD]
 gi|122321876|sp|Q0BAL8.1|DXS_BURCM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115283289|gb|ABI88805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           AMMD]
          Length = 646

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 341/637 (53%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   +   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA   L+
Sbjct: 481 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELD 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 539 A-----TVANMRFVKPIDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 593

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  LAQ GL  + IA ++
Sbjct: 594 VIQ---LGLPDQFIDHGDPAKLLAQCGLDGAGIAKSI 627


>gi|387904758|ref|YP_006335096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. KJ006]
 gi|387579650|gb|AFJ88365.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia sp. KJ006]
          Length = 634

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 436/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG+G GV        +P  +GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGSGTGVATVKEFTALP--IGKGEVRRRSSQPEGKRVAILAFGTMVAPSLAAADELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPIDAALVRELAETHDYLVTVEEGCLMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  L+Q GL  + IA ++
Sbjct: 582 VLQ---LGLPDQFIDHGDPAKLLSQCGLDSAGIAKSI 615


>gi|171320201|ref|ZP_02909261.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
 gi|171094553|gb|EDT39607.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
          Length = 634

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 341/637 (53%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   +   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA   L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPIDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  LAQ GL  + IA ++
Sbjct: 582 VIQ---LGLPDQFIDHGDPAKLLAQCGLDGAGIAKSI 615


>gi|402569608|ref|YP_006618952.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
 gi|402250805|gb|AFQ51258.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
          Length = 634

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 435/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA G+A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDEDECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDCLVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  L+Q GL  + IA ++
Sbjct: 582 VIQ---LGLPDQFIDHGDPAKLLSQCGLDGAGIAKSI 615


>gi|172062808|ref|YP_001810459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           MC40-6]
 gi|229813264|sp|B1Z1G2.1|DXS_BURA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|171995325|gb|ACB66243.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MC40-6]
          Length = 634

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 341/637 (53%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   +   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA   L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  LAQ GL  + IA ++
Sbjct: 582 VIQ---LGLPDQFIDHGDPAKLLAQCGLDGAGIAKSI 615


>gi|170699440|ref|ZP_02890484.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
           IOP40-10]
 gi|170135640|gb|EDT03924.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
           IOP40-10]
          Length = 634

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 341/637 (53%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   +   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSPTPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDEDECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA   L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  LAQ GL  + IA ++
Sbjct: 582 VIQ---LGLPDQFIDHGDPAKLLAQCGLDGAGIAKSI 615


>gi|187921414|ref|YP_001890446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phytofirmans
           PsJN]
 gi|187719852|gb|ACD21075.1| deoxyxylulose-5-phosphate synthase [Burkholderia phytofirmans PsJN]
          Length = 653

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 337/637 (52%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 22  LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 81

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 82  PRDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 141

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 142 ALGMAIASKLQGDNRTGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 199

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 200 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 250

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 251 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 307

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 308 PVLYHGPGKFNPAEGIKPATTPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 367

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 368 FEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 427

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 428 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 486

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG I  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 487 RYPRGAGTGVATVKQMAALPL--GKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLD 544

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD AL+R LA++H+ ++T+EEG + GG GS  V+ L + G++  
Sbjct: 545 A-----TVANMRFVKPLDAALVRQLAETHDAIVTIEEGCVMGGAGSACVEALLESGVMRP 599

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + I  ++
Sbjct: 600 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGITKSI 633


>gi|167566510|ref|ZP_02359426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
           EO147]
 gi|167573591|ref|ZP_02366465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
           C6786]
          Length = 634

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDEMKTLRQLDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  LKG     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLKGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  PM ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPMLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D++F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLSFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEALD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D  L++ LA++H+ L+TVEEG + GG GS  V+ + + G++  
Sbjct: 527 A-----TVANMRFVKPIDAELVQELAQTHDYLVTVEEGCVMGGAGSACVEAMMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  L+  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLSMCGLDGDGIAKSI 615


>gi|254253602|ref|ZP_04946919.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
 gi|124898247|gb|EAY70090.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
          Length = 646

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 340/637 (53%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHTLRQFGGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 481 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD AL+R LA++H+ L+T EEG + GG GS  V+ L + G++  
Sbjct: 539 A-----TVANMRFVKPLDAALVRELAQTHDYLVTAEEGCVMGGAGSACVEALMESGVIRP 593

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD++IDHG PA  L+Q GL  + IA ++
Sbjct: 594 VLQ---LGLPDQFIDHGDPATLLSQCGLDAAGIAKSI 627


>gi|209517793|ref|ZP_03266628.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
 gi|209501739|gb|EEA01760.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
          Length = 635

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 432/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMAV   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAVASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  P+ +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPVLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM VM PSDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTVMTPSDENECRQMLYTALQ-QSHPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG +  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMTAVPL--GKGEVRRETSAPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEGSI GG GS  V+ L   G++  
Sbjct: 527 A-----TVANMRFVKPLDTELVRKLAETHDAIVTVEEGSIMGGAGSACVEALLASGVMRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGIARSI 615


>gi|77970943|gb|ABB12322.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
          Length = 646

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKVLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA G+A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 481 RYPRGAGTGVPTVKEFTEIPL--GKGEVRRQTSQPEGKRVAILAFGTMVAPSLAAAEELD 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 539 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 593

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD +IDHG PA  L+Q GL  + IA ++
Sbjct: 594 VLQ---LGLPDLFIDHGDPAKLLSQCGLDGAGIAKSI 627


>gi|167583905|ref|ZP_02376293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ubonensis Bu]
          Length = 634

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQLDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DR+GLVGADG TH G++D+ FM C+PNM VM PSDE E   M+ TA      P+  
Sbjct: 410 VFAIDRSGLVGADGATHAGAYDLAFMRCIPNMTVMVPSDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPQGKRIAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+VL+T EEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDVLVTSEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG  A  L+Q GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDHAKLLSQCGLDGAGIAKSI 615


>gi|161702975|ref|YP_372966.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
 gi|118595497|sp|Q393P4.2|DXS_BURS3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 634

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKVLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA G+A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVPTVKEFTEIPL--GKGEVRRQTSQPEGKRVAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD +IDHG PA  L+Q GL  + IA ++
Sbjct: 582 VLQ---LGLPDLFIDHGDPAKLLSQCGLDGAGIAKSI 615


>gi|206562766|ref|YP_002233529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           J2315]
 gi|444361874|ref|ZP_21162452.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           BC7]
 gi|444372696|ref|ZP_21172129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|229813273|sp|B4EN29.1|DXS_BURCJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|198038806|emb|CAR54768.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           J2315]
 gi|443592944|gb|ELT61708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443597989|gb|ELT66389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           BC7]
          Length = 634

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ ++TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDYVVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD +IDHG PA  L+Q GL  + IA ++
Sbjct: 582 VLQ---LGLPDLFIDHGDPAKLLSQCGLDGAGIAKSI 615


>gi|421866285|ref|ZP_16297957.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           H111]
 gi|358073868|emb|CCE48835.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           H111]
          Length = 634

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ ++TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDYVVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD +IDHG PA  L+Q GL  + IA ++
Sbjct: 582 VLQ---LGLPDLFIDHGDPAKLLSQCGLDGAGIAKSI 615


>gi|107026830|ref|YP_624341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           AU 1054]
 gi|116691976|ref|YP_837509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           HI2424]
 gi|123461833|sp|A0AYZ0.1|DXS_BURCH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|105896204|gb|ABF79368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           AU 1054]
 gi|116649976|gb|ABK10616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           HI2424]
          Length = 646

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 481 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 539 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 593

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD+++DHG  A  LAQ GL  + IA ++
Sbjct: 594 VLQ---LGLPDQFVDHGDHAKLLAQCGLDGAGIAKSI 627


>gi|295700828|ref|YP_003608721.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
 gi|295440041|gb|ADG19210.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
          Length = 650

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 337/637 (52%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 19  LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 78

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 79  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 138

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 139 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 196

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  P+ +LA K++E+A+GMI 
Sbjct: 197 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPVLDLARKLEEHAKGMI- 247

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 248 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 304

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 305 PVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 364

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 365 FEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 424

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM VMAPSDE E   M+ TA      P+  
Sbjct: 425 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTVMAPSDENECRQMLYTALQ-QSHPTAV 483

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG +  E     G+R+A+L +GT V   LAA+   +
Sbjct: 484 RYPRGAGTGVATIKQMAALPL--GKGEVRRETSAPAGKRIAILAFGTMVAPSLAAAEQFD 541

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEG I GG GS  V+ L   G++  
Sbjct: 542 A-----TVANMRFVKPLDTELVRKLAETHDAIVTVEEGCIMGGAGSACVEALLASGVMRP 596

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 597 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGIARSI 630


>gi|170691119|ref|ZP_02882285.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
 gi|170144368|gb|EDT12530.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
          Length = 635

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 337/637 (52%), Positives = 433/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRR++MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRERMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  S+   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPASAPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM+VM PSDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMMVMVPSDENESRQMLYTALQ-QSCPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +P  VGKG +  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALP--VGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGSACVEALLESGVMRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGIAKSI 615


>gi|312602677|ref|YP_004022522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
           HKI 454]
 gi|312169991|emb|CBW77003.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
           rhizoxinica HKI 454]
          Length = 655

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 340/641 (53%), Positives = 439/641 (68%), Gaps = 35/641 (5%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P T LL TI++P  +++LS  +LK LA+ELRA V+ +VS+TGGHL S+LG +ELT+ALHY
Sbjct: 21  PMTLLLPTIDHPAQLRSLSCTDLKALANELRAFVLDSVSRTGGHLSSNLGTVELTIALHY 80

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ PKDRI+WDVGHQTYPHKILTGRRD+M T+RQ +G+SGF +RSES++D FGT HSST
Sbjct: 81  VFDTPKDRIVWDVGHQTYPHKILTGRRDQMSTLRQWNGISGFPRRSESQFDAFGTAHSST 140

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQV 250
           SISA LGMAV   LKG  +  +AVIGDGAMTAG+A+EA+NNAG   D  ++V+LNDN  +
Sbjct: 141 SISAALGMAVASQLKGEHHRAIAVIGDGAMTAGEAFEALNNAGVCEDIPLLVVLNDN-DM 199

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGAL+  L +L S R     +E   GV K +  PM   A K++E+A+
Sbjct: 200 SIS--------PPVGALNQYLVKLMSGRFYANAKE---GVRKILPLPMLAFAHKLEEHAK 248

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+  + +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  
Sbjct: 249 GMV--TPATLFEEFGFNYIGPIDGHDLDALIPTLQNIRGLR--GPQFLHVVTKKGQGYKL 304

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +S++ ++YT  F E L   AE+D  VV I  AM  G+
Sbjct: 305 AEADPVLYHGPGKFNPAEGIKPAASSK-KTYTQVFGEWLCDAAELDPRVVGITPAMREGS 363

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F +RFP R FDVGIAEQHAVTFA GLA EGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 364 GLVEFEQRFPQRYFDVGIAEQHAVTFAGGLAAEGLKPVVAIYSTFLQRGYDQLIHDVALQ 423

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+ RAGLVGADG TH G++D+ ++ C+PNMVVMAP+DE E   M+ T   I+  
Sbjct: 424 NLPVVFALARAGLVGADGATHAGAYDMAYLRCIPNMVVMAPADENECRQMLHTGLQIEG- 482

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           PS  RYPRG G GV        +P  VGKG I  +     G RVA+L +G+ +   L A+
Sbjct: 483 PSAVRYPRGTGPGVATHKRLSAMP--VGKGEIRRQSQAPAGHRVAILAFGSMLAPSLTAA 540

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
              ++     TVA+ RF KPLD AL+R LA +HE+L+TVEEG++ GG GS V + LA  G
Sbjct: 541 QEFDA-----TVANMRFVKPLDEALVRQLADTHELLVTVEEGTLMGGAGSAVAEALACHG 595

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L   V    L LPD +IDHG  A QLA  GL  + IAA++
Sbjct: 596 KL---VPLMQLGLPDTFIDHGDAAQQLASVGLDATGIAASI 633


>gi|47717729|gb|AAT37907.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis
           guineensis]
          Length = 313

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 298/313 (95%), Positives = 307/313 (98%)

Query: 142 WDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAV 201
           WDVGHQ+YPHKILTGRRDKMHT+RQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAV
Sbjct: 1   WDVGHQSYPHKILTGRRDKMHTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAV 60

Query: 202 GRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPI 261
           GRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPI
Sbjct: 61  GRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPI 120

Query: 262 PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLF 321
           PPVGALSSALSRLQSNRPLRELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGSTLF
Sbjct: 121 PPVGALSSALSRLQSNRPLRELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSTLF 180

Query: 322 EELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV 381
           EELGLYYIGP DGHN+DDL+AIL+E K TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV
Sbjct: 181 EELGLYYIGPGDGHNIDDLIAILKEGKGTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV 240

Query: 382 AKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPT 441
            KFDPATGKQFK SA TQSYTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLFLRRFPT
Sbjct: 241 TKFDPATGKQFKGSAITQSYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPT 300

Query: 442 RCFDVGIAEQHAV 454
           RCFDVGIAEQHAV
Sbjct: 301 RCFDVGIAEQHAV 313


>gi|407710084|ref|YP_006793948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
           phenoliruptrix BR3459a]
 gi|407238767|gb|AFT88965.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
           phenoliruptrix BR3459a]
          Length = 635

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 338/637 (53%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDRMSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   S   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPAVSPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM+VM PSDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMMVMVPSDENESRQMLYTALQ-QSCPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +P  VGKG +  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALP--VGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPLDAELVRELAETHDAIVTVEEGCVMGGAGSACVEALLESGVMRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGIAKSI 615


>gi|170736030|ref|YP_001777290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           MC0-3]
 gi|119368197|sp|Q1BLY7.2|DXS_BURCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813272|sp|B1K3S9.1|DXS_BURCC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169818218|gb|ACA92800.1| deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia MC0-3]
          Length = 634

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 339/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD+++DHG  A  LAQ GL  + IA ++
Sbjct: 582 VLQ---LGLPDQFVDHGDHAKLLAQCGLDGAGIAKSI 615


>gi|254248779|ref|ZP_04942099.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
 gi|124875280|gb|EAY65270.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
          Length = 646

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 338/637 (53%), Positives = 434/637 (68%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDQMHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG  + + ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSENAKLLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       EG+RVA+L +GT V   LAA+  L+
Sbjct: 481 RYPRGAGTGVATVKEFTEIPL--GKGEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELD 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 539 A-----TVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRP 593

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPD+++DHG  A  LAQ GL  + IA ++
Sbjct: 594 VLQ---LGLPDQFVDHGDHAKLLAQCGLDGAGIAKSI 627


>gi|340785926|ref|YP_004751391.1| 1-deoxy-d-xylulose-5-phosphate synthase [Collimonas fungivorans
           Ter331]
 gi|340551193|gb|AEK60568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Collimonas fungivorans
           Ter331]
          Length = 623

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 336/649 (51%), Positives = 446/649 (68%), Gaps = 37/649 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L+  +L+ LADELR  VI +V++TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 3   LLNTIDSPADLRKLTRAQLRPLADELREFVIESVAQTGGHLSSNLGTVELTIALHYVFNT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQTYPHKILTGRRD+MHT+RQ DG+SGF +R+ESEYD FGT HSSTSISA
Sbjct: 63  PEDRVVWDVGHQTYPHKILTGRRDRMHTLRQLDGISGFPRRAESEYDTFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKN-NVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLP 253
            LGMA+    KG  + + +AVIGDGAMTAG  +EAMNNAG Y D +M+VILNDN  +S+ 
Sbjct: 123 VLGMALAAKTKGETDRHAIAVIGDGAMTAGMVFEAMNNAGVYDDINMLVILNDN-DMSIS 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L+RL S +   + + V K +   + GPM +LA + +E+A+GM+
Sbjct: 182 --------PPVGALNRYLARLMSGQFYAQAKNVGKSI---LPGPMRQLAKRFEEHAKGMV 230

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +T+FEE G  YIGP+DGH+++ L+  L+ +KN K  GP  +HVVT+KG+GY  AE 
Sbjct: 231 --VPATMFEEFGFNYIGPIDGHDLESLIPTLQNLKNLK--GPQFLHVVTKKGQGYKLAEA 286

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KF+PA G +  ++    +YT  F + L   A  D  ++ I  AM GG+GL+
Sbjct: 287 DPVLYHGPGKFNPAEGIK-PATVSKMTYTQVFGDWLCDMAAQDDKLIGITPAMSGGSGLD 345

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R +DVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV LQ L 
Sbjct: 346 TFAQRFPQRFYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLD 405

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR+GLVGADG TH G++D+ ++ C+PNMVVMA SDE E   M++TA   +  P+ 
Sbjct: 406 VTFALDRSGLVGADGATHAGNYDMAYLRCIPNMVVMAASDENECRQMLSTAYHYNG-PAA 464

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG GIG  + P    +PL  GKG I  +G+ VA+L +G+ +   +AA  LL++   
Sbjct: 465 VRYPRGAGIGAAIVPELTTLPL--GKGEIRRQGQSVAILAFGSMLAPSMAAGELLDA--- 519

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KPLD  L+  LA++H+ L+TVEEGSI GG GS V + LA  G +      
Sbjct: 520 --TVVNMRFIKPLDVDLVLELAQNHDALVTVEEGSIMGGAGSAVAEALAAAGCV------ 571

Query: 673 RPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +PL+   LPDR+IDHG     LAQ GL    IAA++    G+ +  L +
Sbjct: 572 KPLLNLGLPDRFIDHGDVGQLLAQCGLNAEGIAASIRQRFGKDQPRLVV 620


>gi|307726550|ref|YP_003909763.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
 gi|307587075|gb|ADN60472.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
          Length = 635

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 338/637 (53%), Positives = 432/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRDKMHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDKMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   S   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPAVSPSKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM+VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMMVMAASDENECRQMLYTALQ-QSCPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +P  +GKG +  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALP--IGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEELD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPLDADLVRRLAETHDAIVTVEEGCVMGGAGSACVEALLESGVMRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGIAKSI 615


>gi|323529244|ref|YP_004231396.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
 gi|323386246|gb|ADX58336.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
          Length = 635

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 338/637 (53%), Positives = 430/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDRMSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +   S   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPAVSPSKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM+VM PSDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMMVMVPSDENESRQMLYTALQ-QSCPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +P  VGKG +  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALP--VGKGEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEG + GG GS  V+ L + G+   
Sbjct: 527 A-----TVANMRFVKPLDAELVRELAETHDAIVTVEEGCVMGGAGSACVEALLESGVTRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLAACGLDAAGIAKSI 615


>gi|91777310|ref|YP_552518.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
           LB400]
 gi|118595499|sp|Q13RX1.1|DXS_BURXL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91689970|gb|ABE33168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
           LB400]
          Length = 635

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 338/637 (53%), Positives = 428/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 64  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMAV   LKG     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAVASKLKGDNRMGIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  V+ I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAELDARVIGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG I  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATIKQMTALPL--GKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  L+R LA++H+ ++TVEEG + GG GS  V+ L   G+   
Sbjct: 527 A-----TVANMRFVKPLDADLVRQLAETHDAIVTVEEGCVMGGAGSACVEALLASGVTRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL    I  ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLAACGLDAVGITKSI 615


>gi|313200382|ref|YP_004039040.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
 gi|312439698|gb|ADQ83804.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
          Length = 613

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/632 (50%), Positives = 429/632 (67%), Gaps = 27/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTI  P  ++ L  ++L +LA ELR  VI +V++TGGHL S+LGV+ELT+ALHYVFN
Sbjct: 3   PLLDTIQSPEQLRLLDRKQLPELAQELRTFVIDSVARTGGHLSSNLGVVELTIALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD M  +R  +G++GF +R+ES YD FGTGHSSTSIS
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRDGMADLRMPNGIAGFPRRNESPYDTFGTGHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G +   VA+IGDGAMTAG A+EA+NNAG +D++++VILNDN     P 
Sbjct: 123 AALGMAIAAQQQGSERRAVAIIGDGAMTAGMAFEALNNAGAMDANLLVILNDNDMSISPN 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL + L++L S R    +R   + V   +  PM E A + +E+ +GM+ 
Sbjct: 183 ---------VGALHNYLAKLLSGRFYASMRRSGEKVLGVV-PPMLEFAKRAEEHVKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH+++ L+  L+ ++  K  GP  +H+VT+KG GY  AE  
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDIETLITTLKNIRKLK--GPQFLHIVTQKGHGYAPAEDN 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
             KYHGV KFDP+ G    +S++ ++YT  F++ L+  AE D+ ++ I  AM  G+GLN 
Sbjct: 289 PGKYHGVGKFDPSNGCSVATSSK-KTYTQVFSDWLVDMAEQDERLIGITPAMCDGSGLNA 347

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  +FP R FDVGIAEQHA+TFAAG+AC+G+KP  AIYS+F+QRAYDQ++HD+ LQ LPV
Sbjct: 348 FAEKFPKRFFDVGIAEQHALTFAAGMACDGMKPVVAIYSTFLQRAYDQLIHDIALQNLPV 407

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADGPTH GSFD++FM C+PNM+++APSDE E   M+ TA    D PS  
Sbjct: 408 VFAIDRAGLVGADGPTHAGSFDLSFMRCIPNMLILAPSDENECRQMLYTAYQ-HDGPSAV 466

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  +      +P  +GKG +   G+ VA+L +G+ +   LAA   L++    
Sbjct: 467 RYPRGGGPGAVIKKAMTALP--IGKGEVRRHGKNVAILAFGSMLTPALAAGEKLDA---- 520

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD ALI  LA SH +L+TVEE + +GG G+ V++ L Q   ++  V   
Sbjct: 521 -TVVNMRFVKPLDVALIAELAASHSLLVTVEENTLLGGAGAAVMEALQQ---INPQVATL 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPD +IDHG     LA+ GL    I A++
Sbjct: 577 SLGLPDTFIDHGVHETMLAECGLNAEGIIASI 608


>gi|416995850|ref|ZP_11939109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
 gi|325518121|gb|EGC97907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
          Length = 634

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 339/639 (53%), Positives = 434/639 (67%), Gaps = 36/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGV-------ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV       ELP G KG   EV +     EG+R+A+L +GT V   LAA+  
Sbjct: 469 RYPRGAGTGVATVKEFTELPIG-KG---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEE 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TVA+ RF KP+D AL+R LA++H+ L+T EEG + GG GS  V+ L + G++
Sbjct: 525 LDA-----TVANMRFVKPVDAALVRELAETHDYLVTAEEGCVMGGAGSACVEALMESGVI 579

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD++IDHG PA  L+Q GL  + IA ++
Sbjct: 580 RPVLQ---LGLPDQFIDHGDPAKLLSQCGLDGAGIAKSI 615


>gi|385206459|ref|ZP_10033329.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
 gi|385186350|gb|EIF35624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
          Length = 650

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 336/637 (52%), Positives = 429/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 19  LLKTIDDPAALRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 78

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 79  PHDRIVWDVGHQTYPHKILTGRRDQMHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISA 138

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EA+NNAG  D   ++VILNDN  +S+  
Sbjct: 139 ALGMAIASKLQGDNRMGIAVIGDGAMTAGMAFEALNNAGVEDDVPLLVILNDN-DMSIS- 196

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V + +  PM +LA K++E+A+GMI 
Sbjct: 197 -------PPVGALNRHLARLMSGRFYAAARAGVERVLR-VAPPMLDLARKLEEHAKGMI- 247

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 248 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 304

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  V+ I  AM  G+G+  
Sbjct: 305 PVLYHGPGKFNPAEGIKPATTPSKKTYTQVFGEWLCDAAELDARVIGITPAMREGSGMVE 364

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 365 FEKRFPDRYFDVGIAEQHAVTFAGGLAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 424

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 425 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 483

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG+G GV        +PL  GKG I  E     G+R+A+L +GT V   LAA+  L+
Sbjct: 484 RYPRGSGTGVATIKQMTALPL--GKGEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLD 541

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD  LIR LA++H+ ++TVEEG + GG GS  V+ L   G+   
Sbjct: 542 A-----TVANMRFVKPLDADLIRQLAETHDAIVTVEEGCVMGGAGSACVEALLASGVTRP 596

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL    I  ++
Sbjct: 597 VLQ---LGLPDRFIDHGDPAKLLAACGLDAVGITKSI 630


>gi|238024939|ref|YP_002909171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
 gi|237879604|gb|ACR31936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
          Length = 634

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 336/637 (52%), Positives = 432/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTLALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRREQMATLRQFDGISGFPRRSESVYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG  + + ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEHAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSAAPAKKTYTQVFGEWLCDMAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HD+ LQ LPV
Sbjct: 350 FEKRFPARYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDIALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDEDECRQMLYTAVQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV  P       L VGKG +       EG+RVA+L +GT V   LAA+  ++
Sbjct: 469 RYPRGAGAGV--PTVKAMTALPVGKGEVRRRSAQPEGKRVAILAFGTMVAPSLAAAEQID 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D  LIR LA++H+ L+TVEEG + GG GS  V+ L + G++  
Sbjct: 527 A-----TVANMRFVKPVDAELIRELAETHDYLVTVEEGCVQGGAGSACVEALMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  L+  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGEPAKLLSLCGLDAAGIAKSI 615


>gi|399018342|ref|ZP_10720522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
 gi|398101587|gb|EJL91799.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
          Length = 620

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 339/647 (52%), Positives = 434/647 (67%), Gaps = 34/647 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+TIN P  ++ L   +LK LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 1   MLNTINSPADLRQLPRTQLKPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 60

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+M T+RQ DG+SGF +R+ESEYD FGT HSSTSISA
Sbjct: 61  PEDRIVWDVGHQTYPHKILTGRRDQMSTLRQFDGISGFPRRAESEYDTFGTAHSSTSISA 120

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+    KG   + +AVIGDGAMTAG A+EAMNNAG   D +++VILNDN  +S+  
Sbjct: 121 ALGMALAAKTKGEDRHAIAVIGDGAMTAGMAFEAMNNAGICEDVNLLVILNDN-DMSIS- 178

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +   + + V K +   +  PM ELA +++E+A+GMI 
Sbjct: 179 -------PPVGALNRYLARLMSGQFYAKAKNVGKSM---LPAPMLELAKRLEEHAKGMI- 227

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D L+  L+ +KN K  GP  +HVVT+KG+GY  AE  
Sbjct: 228 -VPATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKNLK--GPQFLHVVTKKGQGYKLAEAD 284

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++A   +YT  F E L   A  DK +V I  AM  G+G+  
Sbjct: 285 PVLYHGPGKFNPAEGIK-PAAASKLTYTQVFGEWLCDMAAQDKTLVGITPAMREGSGMVK 343

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F ++FP R +DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 344 FEQKFPDRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDV 403

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNMVVMA SDE E   M++TA A    P+  
Sbjct: 404 TFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRQMLSTAFAYKG-PASV 462

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  +      IPL  GKG +  EG+ +A+L +GT V     A AL   + L 
Sbjct: 463 RYPRGAGTGAAVEKTLTAIPL--GKGEVRREGKGIAILAFGTMV-----APALATGDKLN 515

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
            TVA+ RF KPLD ALIR LA SH+ L+TVEEG I G     V     +  +      +P
Sbjct: 516 ATVANMRFIKPLDVALIRQLAASHDALVTVEEGCIMGGAGAAVAEALAEAGI-----VKP 570

Query: 675 LV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           ++   LPDR+IDHG     LA  GL    IAA++    G+ +  L +
Sbjct: 571 ILHLGLPDRFIDHGDAGQLLASCGLDGDGIAASIVQRFGKDQPRLVV 617


>gi|390577033|ref|ZP_10257073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
 gi|389931011|gb|EIM93099.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
          Length = 632

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 330/637 (51%), Positives = 432/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+MH++RQ  G+SGF KR ES+YD FGT HSSTSISA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRRDQMHSLRQLGGISGFPKRDESQYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+G  L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLRGEDRFAIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V +    P+ +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLRH-APPVLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG +  +     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALPL--GKGEVRRQSTQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D  L+R LA++H+ ++TVEEG + GG GS  V+ + + G++  
Sbjct: 527 A-----TVANMRFVKPIDADLVRELAETHDAIVTVEEGCVMGGAGSACVEAMMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLASCGLDAAGIAKSI 615


>gi|117924355|ref|YP_864972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus marinus
           MC-1]
 gi|226740156|sp|A0L6H3.1|DXS_MAGSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|117608111|gb|ABK43566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus marinus
           MC-1]
          Length = 622

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 332/640 (51%), Positives = 439/640 (68%), Gaps = 22/640 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LL TI+ P  ++ L+  +L Q+A E+R  +I  VS++GGHLG+SLGV+ELT+ALHYVF
Sbjct: 2   TTLLSTIDSPKALRQLNEAKLPQVAQEMRDHIIECVSQSGGHLGASLGVVELTIALHYVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ+Y HK+LTGRRD++ ++RQ  GLSGFTKRSES YD FGTGHSSTSI
Sbjct: 62  NTPDDRLVWDVGHQSYGHKVLTGRRDQLASIRQRHGLSGFTKRSESPYDPFGTGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY--LDSDMIVILNDNKQVS 251
           SA +GMA      G +   VAVIGDGAM AG A+EA+N+AG+   D D++V+LNDN ++S
Sbjct: 122 SAAMGMARAAKANGIQRKAVAVIGDGAMGAGMAFEALNHAGHDNHDLDLVVVLNDN-EMS 180

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         P VGALSS L+R+ S       R+    V K I   M + A K +E+ +G
Sbjct: 181 IS--------PNVGALSSYLNRMLSGGAYNAFRDGTGKVLKTISRSMWDAAKKAEEHVKG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           ++     TLFEELG  Y GP++GH+ D L+  L  V+  K  GP+L+HV+T+KG+G+P A
Sbjct: 233 LV--MPGTLFEELGFTYFGPINGHDFDALLPTLRNVQ--KLGGPILLHVITKKGKGFPPA 288

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+    YHGVA FD  TG   +SS+   SYT  FA+ L A AE +  + AI AAM  GTG
Sbjct: 289 EEHPCTYHGVAPFDKDTGI-IQSSSGGTSYTKVFAQELCALAEQNPHIHAITAAMREGTG 347

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           LNLF +RFP R  DVGIAEQHAVTFAAGLA EG+ P  AIYS+FMQRAYDQ++HDV LQ 
Sbjct: 348 LNLFEKRFPERFHDVGIAEQHAVTFAAGLATEGILPVVAIYSTFMQRAYDQLIHDVALQD 407

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVGADG TH G++D++++  +P M +MAP+DE EL HM+ TA A+ ++P
Sbjct: 408 LPVIFALDRAGLVGADGATHAGAYDLSYLRTVPGMTIMAPADENELRHMLHTAVAL-NKP 466

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG  +G  LPP    + LE+G+GR L +GE  A+L  G  V   L A+A+LE  
Sbjct: 467 VALRYPRGTALG--LPPEPPHV-LEIGRGRTLRKGEHAAILAVGQPVHPALEAAAILEQQ 523

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+ ++V DARF KPLD  L++ +A  H V++ VEE ++ GGFGS V++ L+  G LD  +
Sbjct: 524 GISVSVYDARFVKPLDQRLLQEVAM-HGVVLVVEENAVQGGFGSAVLESLSNQGALDRGL 582

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           K R + +PDRYI HG+  +   + GL    IA T+  +LG
Sbjct: 583 KIRCMGIPDRYIPHGTQKELRGEIGLDAVGIATTLKELLG 622


>gi|221197058|ref|ZP_03570105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2M]
 gi|221203730|ref|ZP_03576748.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2]
 gi|221212348|ref|ZP_03585325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD1]
 gi|421468344|ref|ZP_15916896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC BAA-247]
 gi|421476964|ref|ZP_15924817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CF2]
 gi|221167447|gb|EED99916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD1]
 gi|221175896|gb|EEE08325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2]
 gi|221183612|gb|EEE16012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2M]
 gi|400227279|gb|EJO57286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CF2]
 gi|400232199|gb|EJO61835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC BAA-247]
          Length = 634

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 339/639 (53%), Positives = 433/639 (67%), Gaps = 36/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGV-------ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV       ELP G KG   EV +     EG+R+A+L +GT V   LAA+  
Sbjct: 469 RYPRGAGTGVATVKEFTELPIG-KG---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEE 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TVA+ RF KPLD AL+R LA++H+ L+T EEG + GG GS  V+ L + G++
Sbjct: 525 LDA-----TVANMRFVKPLDAALVRELAETHDFLVTAEEGCVMGGAGSACVEALMESGVI 579

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD++IDHG PA  L+  GL  + IA ++
Sbjct: 580 RPVLQ---LGLPDQFIDHGDPAKLLSLCGLDGAGIAKSI 615


>gi|186472775|ref|YP_001860117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phymatum
           STM815]
 gi|229813274|sp|B2JP68.1|DXS_BURP8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|184195107|gb|ACC73071.1| deoxyxylulose-5-phosphate synthase [Burkholderia phymatum STM815]
          Length = 632

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 331/637 (51%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF KR ES YD FGT HSSTSISA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRRDQMSTLRQLGGISGFPKRDESPYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+G  L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLRGDDRFAIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V +    P+ +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLRH-APPVLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EG+KP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYYDVGIAEQHAVTFAGGLATEGMKPVVAIYSTFLQRGYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG +  +     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALPL--GKGEVRRQSTQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D AL+R LA++H+ ++TVEEG + GG GS  V+ + + G++  
Sbjct: 527 A-----TVANMRFVKPIDAALVRELAETHDAVVTVEEGCVMGGAGSACVEAMMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLASCGLDAAGIAKSI 615


>gi|330821214|ref|YP_004350076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
           BSR3]
 gi|327373209|gb|AEA64564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
           BSR3]
          Length = 634

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 338/639 (52%), Positives = 431/639 (67%), Gaps = 36/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTLALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M ++RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMSSLRQFDGISGFPRRSESVYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+   L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMALASQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S R     R    GV K   +  P+ ELA K++E+A+GM
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAAR---AGVEKVLSVAPPVLELARKLEEHAKGM 231

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +    +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE
Sbjct: 232 V--VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAE 287

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+
Sbjct: 288 ADPVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDMAELDARVVGITPAMREGSGM 347

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RF  R +DVGIAEQHAVTFA G+A EGLKP  AIYS+F+QRAYDQ++HDV LQ L
Sbjct: 348 VEFEKRFKDRYYDVGIAEQHAVTFAGGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+
Sbjct: 408 PVVFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDEDECRQMLYTAVQ-QPNPT 466

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASAL 607
             RYPRG G GV        IP  VGKG +       EG+RVA+L +GT V   LAA+  
Sbjct: 467 AVRYPRGAGAGVPTVKAMTAIP--VGKGEVRRRSAQPEGKRVAILAFGTMVAPSLAAAEE 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TVA+ RF KP+D  L+R LA++H+ L+TVEEG I GG GS  V+ L + G++
Sbjct: 525 LDA-----TVANMRFVKPIDAELVRELAQTHDYLVTVEEGCIQGGAGSACVEALMEGGVI 579

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR+IDHG PA  L+  GL  + IA ++
Sbjct: 580 RPVLQ---LGLPDRFIDHGDPAKLLSLCGLDAAGIAKSI 615


>gi|161521356|ref|YP_001584783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
 gi|160345406|gb|ABX18491.1| deoxyxylulose-5-phosphate synthase [Burkholderia multivorans ATCC
           17616]
          Length = 646

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 339/639 (53%), Positives = 432/639 (67%), Gaps = 36/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 16  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 76  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 136 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 193

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 194 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 244

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 245 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 301

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 302 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 362 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 422 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 480

Query: 555 RYPRGNGIGV-------ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV       ELP G KG   EV +     EG+R+A+L +GT V   LAA+  
Sbjct: 481 RYPRGAGTGVATVKEFTELPIG-KG---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEE 536

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TVA+ RF KPLD AL+R LA++H+ L+T EEG + GG GS  V+ L + G++
Sbjct: 537 LDA-----TVANMRFVKPLDAALVRELAETHDFLVTAEEGCVMGGAGSACVEALMESGVI 591

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD++IDHG PA  L+  GL    IA ++
Sbjct: 592 RPVLQ---LGLPDQFIDHGDPAKLLSLCGLDGVGIAKSI 627


>gi|171363673|dbj|BAG14385.1| 1-deoxyxylulose-5-phosphate synthase [Perkinsus marinus]
          Length = 841

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 346/707 (48%), Positives = 453/707 (64%), Gaps = 77/707 (10%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           PTP LD +  P  ++ +S+ +LK L ++ R  ++ +VS+TGGHLGS+LGV+ELT ALH+V
Sbjct: 138 PTPTLDKVQSPEDIRKMSLPQLKDLCNDTRRFLVRSVSQTGGHLGSNLGVVELTAALHHV 197

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           F+ PKD+++WDV HQ YPHKI TGRR++M T+RQ  GLSGFTKRSES YD FG GHS T+
Sbjct: 198 FDLPKDKLIWDVSHQAYPHKIFTGRRERMSTLRQGGGLSGFTKRSESPYDPFGAGHSGTA 257

Query: 193 ISAGLGMAVGRDLKGRKNN--------------------VVAVIGDGAMTAGQAYEAMNN 232
           +SA  G A+ RD K R ++                    VV+V+GDGA+T G AYEAMN+
Sbjct: 258 MSAATGFAIARDHKKRVHDEAVREGGHTTPPLSPEDDYTVVSVVGDGAITGGMAYEAMNH 317

Query: 233 AGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQ--------------SN 277
           AG+L     +VILNDN QVSLPTA  +    PVGALS ALS++               S+
Sbjct: 318 AGWLKLRKFLVILNDNGQVSLPTA-YNEVHTPVGALSEALSKMGGMDSSVPDAISKVLSS 376

Query: 278 RPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMISG-SGSTLFEELGLYYIGPVDGH 335
              ++ R   K   K +  P + E   +++EY RG++S  S  T+FEELG YY+GPVDGH
Sbjct: 377 PSFQDARNTLKLAVKALCPPQLAESLGRIEEYGRGLLSTYSRGTMFEELGFYYVGPVDGH 436

Query: 336 NVDDLVAILEEVKNT----KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 391
            +D LV +L  +K +    K T P+L+HV TEKG GY  AE A DK HGV +FD  TGK+
Sbjct: 437 CLDTLVTVLSNLKQSMDEGKITKPILLHVKTEKGHGYKPAEVALDKLHGVTQFDVKTGKK 496

Query: 392 F-------------KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 438
                           + +  +YT  FA+ALIA AE D  +VAI AAM GGTGL+ F ++
Sbjct: 497 EVPTKVVEAPPTTETKAPKKMAYTDVFAKALIAAAERDSRIVAITAAMPGGTGLHHFEKK 556

Query: 439 FP-TRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFA 497
           F   R FDVGI EQHAVT AAG+A EGL P+ AIYSSFMQRA DQ+VHDV LQKLPVRF 
Sbjct: 557 FGLDRMFDVGICEQHAVTMAAGMAAEGLVPYAAIYSSFMQRAIDQMVHDVALQKLPVRFV 616

Query: 498 MDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYP 557
           +DRAG VGADGPTH G FD+  + C+P + + AP DEAEL +M+ T + +DD PS  R+P
Sbjct: 617 LDRAGFVGADGPTHHGQFDLAMLGCIPGVKICAPGDEAELSNMIYTMSKLDDGPSVVRFP 676

Query: 558 RGNGIGVELPPGNKGIP--LEVGKGRIL-----IEGE-RVALLGYGTAVQSC-LAASALL 608
           RG+G GV +P     +P  LE GKGR++      EGE  V LL  G  +  C  AA  L 
Sbjct: 677 RGSGEGVPIPV----VPEFLEPGKGRVVKEYDGKEGELSVVLLSLGARLGECKKAAKVLS 732

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL-D 667
           E  G  +TVADAR+ KPLD  +I  LA+ H++++TVEEGSIGGFGSHV++ L   G+L D
Sbjct: 733 EKYGHHVTVADARWMKPLDETMICELARGHDIMVTVEEGSIGGFGSHVLELLTDKGILGD 792

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           G +K   + +PD +    +P +QL +AG+       +V  I+G+ R+
Sbjct: 793 GKLKVGTIHIPDEWYQADTPENQLEKAGV-------SVDGIVGKARK 832


>gi|189352477|ref|YP_001948104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
 gi|189336499|dbj|BAG45568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
          Length = 634

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 339/639 (53%), Positives = 432/639 (67%), Gaps = 36/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDEMPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSQLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L  EAE D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RF  R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFKDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ FM C+PNM +MA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFMRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGV-------ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV       ELP G KG   EV +     EG+R+A+L +GT V   LAA+  
Sbjct: 469 RYPRGAGTGVATVKEFTELPIG-KG---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEE 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TVA+ RF KPLD AL+R LA++H+ L+T EEG + GG GS  V+ L + G++
Sbjct: 525 LDA-----TVANMRFVKPLDAALVRELAETHDFLVTAEEGCVMGGAGSACVEALMESGVI 579

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD++IDHG PA  L+  GL    IA ++
Sbjct: 580 RPVLQ---LGLPDQFIDHGDPAKLLSLCGLDGVGIAKSI 615


>gi|312795724|ref|YP_004028646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
           HKI 454]
 gi|312167499|emb|CBW74502.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
           rhizoxinica HKI 454]
          Length = 648

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/637 (52%), Positives = 433/637 (67%), Gaps = 33/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 15  LLKTIDDPAALRRLERRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 74

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +R ESEYD FGT HSSTSISA
Sbjct: 75  PADRIVWDVGHQTYPHKILTGRRDQMSTLRQLGGISGFPRRCESEYDTFGTAHSSTSISA 134

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+   LKG     +AVIGDGAMTAG+A+EA+NNAG   D  ++VILNDN  +S+  
Sbjct: 135 ALGMAIASQLKGEDRYAIAVIGDGAMTAGEAFEALNNAGVCEDIPLLVILNDN-DMSIS- 192

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     ++  + V +    PM ELA K++E+A+GM+ 
Sbjct: 193 -------PPVGALNRYLARLMSGKFYATAKKGVERVLRH-APPMLELARKLEEHAKGMV- 243

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            + +TLFEE G  YIGP+DGH++D L+  L+ ++  +  GP  +HVVT+KG+GY  AE  
Sbjct: 244 -TPATLFEEFGFNYIGPIDGHDLDALIPTLQNIRGLR--GPQFLHVVTKKGQGYKLAEAD 300

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  +S++ ++YT  F E L   AE+D  VV I  AM  G+GL  
Sbjct: 301 PVLYHGPGKFNPAEGIKPAASSK-KTYTQVFGEWLCDAAELDPRVVGITPAMREGSGLVE 359

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 360 FEQRFPQRYFDVGIAEQHAVTFAGGLAAEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPV 419

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ ++ C+PNMVVMAP+DE E   M+ T   I+  PS  
Sbjct: 420 VFALDRAGLVGADGATHAGAYDMAYLRCIPNMVVMAPADENECRQMLHTGLQIEG-PSAV 478

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +P  VGKG I  +     G RVA+L +G+ +   L A+   +
Sbjct: 479 RYPRGTGPGVATHKRLSAVP--VGKGEIRRQSQAPAGHRVAILAFGSMLAPSLTAAQEFD 536

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KPLD AL+R LA +HE+L+TVEEG + GG GS  ++ L   G++  
Sbjct: 537 A-----TVANMRFVKPLDEALVRQLADTHELLVTVEEGCVMGGAGSACIESLQAAGIIRP 591

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG P   LA  GL  + IA+ +
Sbjct: 592 VLQ---LGLPDRFIDHGDPTKLLAACGLDAAGIASAI 625


>gi|420247660|ref|ZP_14751055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
 gi|398070554|gb|EJL61848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
          Length = 632

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 331/637 (51%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+MH++RQ  G+SGF KR ES YD FGT HSSTSISA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRRDQMHSLRQLGGISGFPKRDESPYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+G  L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLRGEDAYSIAVIGDGAMTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V +    P+ +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLRH-APPVLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG +  +     G+R+A+L +GT V   LAA+  L+
Sbjct: 469 RYPRGAGTGVATVKQMAALPL--GKGEVRRQSTQPAGKRIAILAFGTMVAPSLAAAEQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D  L+R LA++H+ ++TVEEG + GG GS  V+ + + G++  
Sbjct: 527 A-----TVANMRFVKPIDADLVRELAETHDAIVTVEEGCVMGGAGSACVEAMMESGVIRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 582 VLQ---LGLPDRFIDHGDPAKLLASCGLDAAGIAKSI 615


>gi|372490115|ref|YP_005029680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
 gi|359356668|gb|AEV27839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
          Length = 618

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/633 (52%), Positives = 420/633 (66%), Gaps = 26/633 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI+ P  ++ L  R+L QLA+ELR  ++ +VS+TGGHL S+LG +ELT+ALHYVF
Sbjct: 5   TPLLDTIDSPAQLRRLDKRQLPQLAEELRTFIVESVSRTGGHLSSNLGTVELTIALHYVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P+DR++WDVGHQTYPHKILTGRR  M  +R   GLSGF KR ES YD FG GHSSTSI
Sbjct: 65  DTPEDRLVWDVGHQTYPHKILTGRRAGMAKLRMHGGLSGFPKRCESAYDTFGVGHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+    KG     VA+IGDGAM+AG A+EA+NNAG  D++M+VILNDN  +S+ 
Sbjct: 125 SAALGMALAAKQKGENRKAVAIIGDGAMSAGMAFEALNNAGVADANMLVILNDN-DMSIS 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L+RL S       R   + V   +  P+ ELA + +E+ +GM+
Sbjct: 184 --------PPVGALNKYLARLLSGGLYSAARRAGEKVLG-VAPPLLELAKRAEEHVKGML 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +  TLFEELG  YIGP+DGH++D LV  L+ +K  K  GP  +HV+T+KG+GY  AE 
Sbjct: 235 --TPGTLFEELGFNYIGPIDGHDLDALVPTLQNLKGLK--GPQFLHVITKKGQGYKLAEA 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV+KF P  G Q        +YT  F++ L   A  +  +V I  AMG G+GL 
Sbjct: 291 NPVLYHGVSKFQPEVGIQSGKGGGKLTYTQVFSDWLCDMAAAEPRLVGITPAMGEGSGLV 350

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F   +P R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QR YDQ+VHDV LQ LP
Sbjct: 351 RFAELYPERYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLVHDVALQNLP 410

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR GLVGADG TH G+FD++FM C+PN+V+MAP+DE E   M+ TA  ID  PS 
Sbjct: 411 VVFAIDRGGLVGADGATHHGAFDLSFMTCIPNLVIMAPADEDECRKMLTTAMGIDG-PSA 469

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GV   P      L VGKG I  +G+ VALL +G+ VQ+ L A   L++   
Sbjct: 470 VRYPRGGGSGVT--PETALTALPVGKGEIRRQGKGVALLAFGSMVQAALGAGDALDA--- 524

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKW 672
             +VA+ RF KPLD  L+  LA++HE+L++VEE + IGG GS V + L + GL   TV  
Sbjct: 525 --SVANMRFVKPLDRELLAELARNHELLVSVEENALIGGAGSEVARALEEMGL---TVPL 579

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPD +IDHG     LA+ GL    I   V
Sbjct: 580 LRLGLPDHFIDHGDQNLLLAELGLDVDGIVRQV 612


>gi|167842190|ref|ZP_02468874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
 gi|424905504|ref|ZP_18329007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
 gi|390928397|gb|EIP85801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
          Length = 634

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 332/637 (52%), Positives = 430/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        +PL  GKG +       +G+R+A+L +GT V   +AA+  L+
Sbjct: 469 RYPRGAGTGVATVKAFTELPL--GKGEVRRRTSQPDGKRIAILAFGTMVAPSIAAAEALD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF KP+D  L+R LA++H+ L+TVEEG + GG GS  V+ + + G++  
Sbjct: 527 A-----TVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLSMCGLDSDGIANSI 615


>gi|253998308|ref|YP_003050371.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
           SIP3-4]
 gi|253984987|gb|ACT49844.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
           SIP3-4]
          Length = 613

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/632 (50%), Positives = 427/632 (67%), Gaps = 27/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTI  P  ++ L  ++L +LA ELR  VI +V++TGGHL S+LGV+ELT+ALHYVFN
Sbjct: 3   PLLDTIQSPEQLRLLDRKQLPELAQELRTFVIDSVARTGGHLSSNLGVVELTIALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD M  +R  +G++GF +R+ES YD FGTGHSSTSIS
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRDGMADLRMPNGIAGFPRRNESPYDTFGTGHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G +   VA+IGDGAMTAG A+EA+NNAG +D++++VILNDN     P 
Sbjct: 123 AALGMAIAAQQQGSERRAVAIIGDGAMTAGMAFEALNNAGAMDANLLVILNDNDMSISPN 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL + L++L S R    +R   + V   +  PM E A + +E+ +GM+ 
Sbjct: 183 ---------VGALHNYLAKLLSGRFYASMRRSGEKVLGVV-PPMLEFAKRAEEHVKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH+++ L+  L+ ++  K  GP  +H+VT+KG GY  AE  
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDIETLITTLKNIRKLK--GPQFLHIVTQKGHGYAPAEDN 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
             KYHGV KFDP+ G    +S++ ++YT  F++ L+  AE D+ ++ I  AM  G+GLN 
Sbjct: 289 PGKYHGVGKFDPSNGCSVATSSK-KTYTQVFSDWLVDMAEQDERLIGITPAMCDGSGLNA 347

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  +FP R FDVGIAEQHA+TFAAG+AC+G+KP  AIYS+F+QRAYDQ++HD+ LQ LPV
Sbjct: 348 FAEKFPKRFFDVGIAEQHALTFAAGMACDGMKPVVAIYSTFLQRAYDQLIHDIALQNLPV 407

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADGPTH GSFD++FM C+PNM+++ PSDE E   M+ TA    D PS  
Sbjct: 408 VFAIDRAGLVGADGPTHAGSFDLSFMRCIPNMLILTPSDENECRQMLYTAYQ-HDGPSAV 466

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  +      +P  +GKG +   G+ VA+L +G+ +   L A   L++    
Sbjct: 467 RYPRGGGPGAVIEKVMTALP--IGKGEVRRHGKNVAILAFGSMLTPALVAGEKLDA---- 520

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD ALI  LA SH +L+TVEE + +GG G+ V++ L Q   ++  V   
Sbjct: 521 -TVVNMRFVKPLDVALIAELAASHSLLVTVEENTLLGGAGAAVMEALQQ---INPQVATL 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPD +IDHG     LA+ GL    I A++
Sbjct: 577 SLGLPDTFIDHGVHETMLAECGLNAEGIIASI 608


>gi|395760865|ref|ZP_10441534.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium lividum
           PAMC 25724]
          Length = 622

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 333/647 (51%), Positives = 432/647 (66%), Gaps = 29/647 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  ++ L+  +L  LA +LR+ ++ +VSKTGGHL S+LG +ELTVALHYVFN 
Sbjct: 3   LLETINEPAQVRKLARSQLVPLAQQLRSFLLDSVSKTGGHLSSNLGTVELTVALHYVFNT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTY HKILTGRR++MHT+RQ DG+SGF KR ESEYD FGT HSSTSISA
Sbjct: 63  PHDRIVWDVGHQTYSHKILTGRRERMHTLRQKDGISGFPKRDESEYDTFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA    +KG   + +AVIGDG+MTAG A+EAMNNAG   D +++VILNDN  +S+  
Sbjct: 123 ALGMAQAAKIKGDPLHAIAVIGDGSMTAGMAFEAMNNAGVQEDVNLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     + V K V   + GP+ ELA + +E+A+GM+ 
Sbjct: 181 -------PPVGALNRHLARLMSGQFYAAAKNVGKSV---LPGPVLELAKRFEEHAKGMV- 229

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D L+  L+ +K  K  GP  +HVVT+KG+GY  AE  
Sbjct: 230 -VPATMFEEFGFNYIGPIDGHDLDSLIPTLQNIKQLK--GPQFLHVVTKKGQGYKLAEAQ 286

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++    +YT  F   L   A  DK +V I  AM  G+G+  
Sbjct: 287 PILYHGTGKFNPAEGIKPATAPAKMTYTEVFGNWLCDMATHDKRLVGITPAMREGSGMVK 346

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F ++FP R FDVGIAEQH+VTF AGLACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 347 FEQQFPNRYFDVGIAEQHSVTFGAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDV 406

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNMVVMA SDE E   M+ T       P+  
Sbjct: 407 TFALDRAGLVGADGATHAGNYDMAFLRCIPNMVVMAASDENECRQMLTTGYHYPG-PAAI 465

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV + P    I  E+GKG I  +G+R A+L +G+ V   +AA   L++    
Sbjct: 466 RYPRGAGAGVAIVPELTSI--EIGKGEIKRQGKRSAILAFGSMVAPSVAAGEKLDA---- 519

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD AL++ LA  H+ L+TVEEG I GG GS V + LA +G++   +   
Sbjct: 520 -TVANMRFVKPLDVALLKQLAAEHDYLVTVEEGCIMGGAGSAVAEALAAEGIVKPILM-- 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            L LPD +IDHG P   L   GL  + IAA++    G ++  L  +S
Sbjct: 577 -LGLPDVFIDHGDPVQLLKSVGLDAAGIAASIEQRFGASQPRLAAVS 622


>gi|253995977|ref|YP_003048041.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
 gi|253982656|gb|ACT47514.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
          Length = 617

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 318/638 (49%), Positives = 436/638 (68%), Gaps = 25/638 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLL+TIN P  ++ L  REL QLA ELR  ++ +V+KTGGHL S+LGV+ELT+ALHYVF
Sbjct: 2   TPLLNTINDPEQLRLLERRELVQLAHELRLFLVDSVAKTGGHLASNLGVVELTIALHYVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P D+++WDVGHQTYPHKILTGRR+ M  +R+  G++GF +R+ES YD FGTGHSSTSI
Sbjct: 62  NTPDDKLVWDVGHQTYPHKILTGRREAMQNLRKPQGIAGFPRRNESGYDTFGTGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMAV     G +   VA+IGDGAMTAG A+EA+NNAG +D++++V+LNDN  +S+ 
Sbjct: 122 SAALGMAVAAQKAGSERRSVAIIGDGAMTAGMAFEALNNAGNMDANLLVVLNDN-DMSIS 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                     VGAL++ L++L S+R    +R+  K V   +  PM E A + +E+ +GM+
Sbjct: 181 NN--------VGALNNYLAKLLSSRFYGTVRKSGKKVLSAL-PPMMEFAKRAEEHVKGMV 231

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +  TLFEE G  YIGP+DGH++D L+  L  +K  +  GP  +H+VT+KG+G+  AE 
Sbjct: 232 --TPGTLFEEFGFNYIGPIDGHDLDALIDTLHNIK--QLNGPQFLHIVTQKGKGFEPAEA 287

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
             +K+HGV KFDP  G    + A  +SYT  F + L+  A  D  ++ +  AM  G+GLN
Sbjct: 288 NPNKFHGVGKFDPFNGNAISAKA-AKSYTEVFGDWLVDMAAADHRLIGVTPAMCDGSGLN 346

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F  +FP R +DVGIAEQHA+TFAAG+AC+GLKP  AIYS+F+QRAYDQ++HD+ LQ LP
Sbjct: 347 AFASQFPERYYDVGIAEQHALTFAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIALQNLP 406

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V  A+DRAGLVGADGPTH GSFD+TFM C+PN+V+M PS+E E   M++T   + +  + 
Sbjct: 407 VLLAIDRAGLVGADGPTHAGSFDLTFMRCIPNIVIMTPSNENECRQMLST-GFLYNGVAA 465

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+G G  +   N  +P+E+GKGRI  +GE+VA+L +G+ +   L A+  + +   
Sbjct: 466 VRYPRGSGTGATV--NNSLLPIEIGKGRIERQGEKVAILAFGSMLAPALEAAEAINA--- 520

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL-AQDGLLDGTVK 671
             TVA+ RF KP+DHALI  LA +H  +IT+EE  + GG GS V++ L A    L  T+K
Sbjct: 521 --TVANMRFVKPIDHALIAQLASTHTAIITIEENCVMGGAGSAVMESLQAMQHSLSHTIK 578

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
              L LPD++I+HG     LA  GL    IA+ +  ++
Sbjct: 579 TLSLGLPDQFIEHGVHETMLADCGLDAKGIASAIAKLI 616


>gi|226941242|ref|YP_002796316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Laribacter hongkongensis
           HLHK9]
 gi|254782077|sp|C1DAW8.1|DXS_LARHH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|226716169|gb|ACO75307.1| Dxs [Laribacter hongkongensis HLHK9]
          Length = 622

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 334/635 (52%), Positives = 426/635 (67%), Gaps = 30/635 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ L  ++L QLA ELR  ++ +VS+TGGH  S+LG IELT+ALHYV+
Sbjct: 4   TPLLDTIQIPADLRELDRKQLPQLARELRDFLVDSVSQTGGHFASNLGSIELTIALHYVY 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQTYPHKILTGRRD+MHTMRQ  GL+GF KR ESEYD FG GHSSTSI
Sbjct: 64  NTPDDRLVWDVGHQTYPHKILTGRRDRMHTMRQKGGLAGFPKRDESEYDTFGVGHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
            A LGMAV     G    VVA+IGDGAMTAGQA+EA+NNAG  D+D++VILNDN     P
Sbjct: 124 GAALGMAVAARQTGSDRRVVAIIGDGAMTAGQAFEALNNAGDSDTDLLVILNDNDMSISP 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG--GPMHELAAKVDEYARG 311
                     VGAL+   +RL S R    ++    G  + +G   P+ +LA K +E  +G
Sbjct: 184 N---------VGALNHYFTRLMSGRFYATMK---SGTNRVLGMAPPLQKLAHKAEEQVKG 231

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           ++  + +TLFEE G  Y+GPVDGH++  LV  L+ ++  K  GP  +HVVT+KG GY  A
Sbjct: 232 LL--TPATLFEEFGFNYLGPVDGHDLGVLVNTLQNIRQLK--GPQFLHVVTKKGHGYKLA 287

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EK    YHGV+KF P  G   KS +    YT  F + L   A  D+ +V I  AM  G+G
Sbjct: 288 EKDPISYHGVSKFSPENGLVSKSGSSKPGYTQVFGDWLCDMAAQDERLVGITPAMREGSG 347

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           +  F + +P R FDVGIAEQHAVTFAAG+AC+GLKP  AIYS+F+QRAYDQ++HDV LQ 
Sbjct: 348 MVRFEKEYPDRYFDVGIAEQHAVTFAAGMACDGLKPVVAIYSTFLQRAYDQLIHDVALQN 407

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVGADGPTH G+FD++++ C+PNMVVMAPSDE E   ++ T A + D P
Sbjct: 408 LPVVFAIDRAGLVGADGPTHAGAFDLSYLRCIPNMVVMAPSDENECRQLLYT-AFLHDGP 466

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           +  RYPRG G G E       +PL  G+G +  +G+ +A+L +G+ V   LAA+  L++ 
Sbjct: 467 TAVRYPRGTGPGCEPVAAMTALPL--GQGTLRRQGKGIAILAFGSMVHPALAAADQLDA- 523

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               +VAD RF KPLD ALIR LA SHE+L+TVEE  + GG GS V++ LA  G+   TV
Sbjct: 524 ----SVADMRFVKPLDTALIRQLAASHELLVTVEENVVMGGTGSAVLETLAAAGI---TV 576

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               L LPD Y++HG PA  LA  GL  + I  +V
Sbjct: 577 PVLNLGLPDHYVEHGDPALLLADCGLDTAGIVRSV 611


>gi|83717976|ref|YP_438814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
 gi|167615333|ref|ZP_02383968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           Bt4]
 gi|257141898|ref|ZP_05590160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
 gi|118595498|sp|Q2T7N5.1|DXS_BURTA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|83651801|gb|ABC35865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
          Length = 634

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 337/637 (52%), Positives = 429/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+RVA+L +GT V     A +L  
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRVAILAFGTMV-----APSLAA 521

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+R LA++H+ L+TVEEG + GG GS  V+ + + G +  
Sbjct: 522 ADALDATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGSACVEAMMEGGAVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  LA  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLAMCGLDGDGIAKSI 615


>gi|167577163|ref|ZP_02370037.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           TXDOH]
          Length = 634

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 337/637 (52%), Positives = 429/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSATPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+RVA+L +GT V     A +L  
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRVAILAFGTMV-----APSLAA 521

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+R LA++H+ L+TVEEG + GG GS  V+ + + G +  
Sbjct: 522 ADALDATVANMRFVKPIDAELVRELAQTHDYLVTVEEGCVMGGAGSACVEAMMEGGAVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  LA  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLAMCGLDGDGIAKSI 615


>gi|345864102|ref|ZP_08816307.1| 1-deoxy-D-xylulose-5-phosphate synthase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
 gi|345124820|gb|EGW54695.1| 1-deoxy-D-xylulose-5-phosphate synthase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
          Length = 636

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 332/636 (52%), Positives = 429/636 (67%), Gaps = 33/636 (5%)

Query: 62  SERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLG 121
           +E+G Y        LL+ ++ P  ++ L  ++L  LA ELR  +I +VS+TGGHL + LG
Sbjct: 8   TEQGSY-------SLLEQVDLPQDLRRLEPKQLPLLALELRRFLIESVSRTGGHLAAGLG 60

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           V+ELT+ALHYVFN P+DR++WDVGHQ YPHKILTGRR++M  +RQ  G SGF KRSES+Y
Sbjct: 61  VVELTIALHYVFNTPQDRLIWDVGHQAYPHKILTGRREQMAKLRQQGGPSGFPKRSESDY 120

Query: 182 DCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           D FGTGHSSTSISA LGMAV    KG    VVAVIGDG++ AG A+EA+N+AG LD D++
Sbjct: 121 DTFGTGHSSTSISAALGMAVAARRKGESRKVVAVIGDGSIGAGMAFEALNHAGVLDQDLL 180

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           V+LNDNK +S+          PVGA S+ LSRL S      +RE  K +   +   + EL
Sbjct: 181 VVLNDNK-MSISK--------PVGAFSNHLSRLLSGTLYTGMREGGKSLLSHLPSQVSEL 231

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
             + +E+ +GM+     T+FEELG  YIGP+DGH++D LV  L  +  +K +GP L+HVV
Sbjct: 232 MGRWEEHMKGMV--LPGTMFEELGFNYIGPIDGHDLDTLVPTLRNM--SKLSGPCLLHVV 287

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           T+KGRGY  AE++   YHGV  F+PATG+  K      SYT  F + L A AE D+ ++A
Sbjct: 288 TQKGRGYEPAEESPIAYHGVTPFNPATGEMTKGGG-GPSYTQIFGDWLCATAEKDERLLA 346

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+G+  F RRFP R FDVGIAEQHA+T AAG+ACEG KP  AIYSSF+QRAYD
Sbjct: 347 ITPAMCEGSGMVEFARRFPKRYFDVGIAEQHALTLAAGMACEGAKPVVAIYSSFLQRAYD 406

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV LQ L V  A+DRAG VGADG TH GSFD+++   LPNM++MAPSDE E   M+
Sbjct: 407 QLIHDVVLQNLDVTLAVDRAGQVGADGATHAGSFDLSYARVLPNMLIMAPSDENECSRML 466

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            TA      P+  RYPRG G G E+    K  PLE+G+GR+  EG RVALL +G+ +Q+ 
Sbjct: 467 QTAYDYPG-PAMVRYPRGGGTGAEVEQPAK--PLELGQGRLRREGCRVALLSFGSLLQTA 523

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           LAA+  L++     TVAD RF KPLD AL+  LA  HE+L+T+EE  + GG GS V ++L
Sbjct: 524 LAAAEQLDA-----TVADMRFVKPLDEALVLDLASRHELLVTLEENQVQGGAGSAVNEYL 578

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
           A  G    +V+   L LPDR+I H +   QLA+ GL
Sbjct: 579 AHIG---HSVRLLNLGLPDRFIHHATQQQQLAECGL 611


>gi|403523639|ref|YP_006659208.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BPC006]
 gi|403078706|gb|AFR20285.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BPC006]
          Length = 651

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 334/637 (52%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 21  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 80

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 81  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 140

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 141 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 198

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 199 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 249

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 250 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 306

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 307 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 366

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 367 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 426

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 427 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 485

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V     A +L  
Sbjct: 486 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAA 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+++LA++H+ L+TVEEG + GG GS  V+ + + G++  
Sbjct: 539 ADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRP 598

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 599 VLQ---LGLPDRFVDHGDPAKLLSLCGLDGDGIAKSI 632


>gi|126443346|ref|YP_001063527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           668]
 gi|134278298|ref|ZP_01765012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           305]
 gi|167915841|ref|ZP_02502932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           112]
 gi|217422468|ref|ZP_03453971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           576]
 gi|166198605|sp|A3NMF6.1|DXS_BURP6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|126222837|gb|ABN86342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           668]
 gi|134250082|gb|EBA50162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           305]
 gi|217394699|gb|EEC34718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           576]
          Length = 634

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 334/637 (52%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V     A +L  
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAA 521

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+++LA++H+ L+TVEEG + GG GS  V+ + + G++  
Sbjct: 522 ADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLSLCGLDGDGIAKSI 615


>gi|237510266|ref|ZP_04522981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           MSHR346]
 gi|235002471|gb|EEP51895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           MSHR346]
          Length = 634

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 334/637 (52%), Positives = 431/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V     A +L  
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAA 521

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+++LA++H+ L+TVEEG + GG GS  V+ + + G++  
Sbjct: 522 ADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLSLCGLDGDGIAKSI 615


>gi|167724591|ref|ZP_02407827.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           DM98]
 gi|167743542|ref|ZP_02416316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           14]
 gi|167899159|ref|ZP_02486560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           7894]
 gi|167923680|ref|ZP_02510771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BCC215]
 gi|254184924|ref|ZP_04891513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1655]
 gi|386865571|ref|YP_006278519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026b]
 gi|418397014|ref|ZP_12970764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354a]
 gi|418536792|ref|ZP_13102461.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026a]
 gi|418544103|ref|ZP_13109415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258a]
 gi|418550944|ref|ZP_13115891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258b]
 gi|418556611|ref|ZP_13121235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354e]
 gi|184215516|gb|EDU12497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1655]
 gi|385350375|gb|EIF56919.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258b]
 gi|385350772|gb|EIF57294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258a]
 gi|385351684|gb|EIF58150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026a]
 gi|385366776|gb|EIF72378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354e]
 gi|385369578|gb|EIF74893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354a]
 gi|385662699|gb|AFI70121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026b]
          Length = 634

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 334/637 (52%), Positives = 430/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V     A +L  
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAA 521

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+++LA++H+ L+TVEEG + GG GS  V+ + + G +  
Sbjct: 522 ADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLSLCGLDGDGIAKSI 615


>gi|386827785|ref|ZP_10114892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
 gi|386428669|gb|EIJ42497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
          Length = 638

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 319/633 (50%), Positives = 420/633 (66%), Gaps = 27/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ I+ P  +++LS  +L QLA ELR  +I  VS+ GGH  S+LG +ELT+ALHYVFN
Sbjct: 9   PLLEQIDSPAQLRDLSEEQLPQLASELREFLINTVSRIGGHFSSNLGTVELTIALHYVFN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ+YPHKILTGRRDKMHT+RQ  GLSGF KR+ESEYD FG GHSSTSIS
Sbjct: 69  TPDDRLVWDVGHQSYPHKILTGRRDKMHTIRQPHGLSGFPKRTESEYDTFGVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+   L G    V+AVIGDGA+TAG A+EA+ +AG +D+D++VILNDN       
Sbjct: 129 AALGMAIASKLAGINRKVMAVIGDGALTAGMAFEALEHAGDVDADLLVILNDN------- 181

Query: 255 ATLDGPIPP-VGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
              D  I P VG LS+ L+++ S+R    +R+ +K +  +I   M ELA + +E+ +GM+
Sbjct: 182 ---DMSISPNVGGLSNYLAKILSSRFYASVRQGSKQLLHRIP-TMRELARRAEEHVKGMV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                TLFEELG  YIGPVDGH++  L+  L  +K  K  GP  +HV+T+KG+GYP AE 
Sbjct: 238 IPG--TLFEELGFNYIGPVDGHDLSALIPTLRNMKALK--GPQFLHVITQKGKGYPIAED 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV  FDP TGK  K SA   +YT  F + L   A  D  ++ I  AM  G+GL 
Sbjct: 294 NPCTYHGVTAFDPKTGKMAKKSASAPTYTQIFGQWLCDMAAQDDKLIGITPAMREGSGLV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F  +FP R FDV IAEQH+VT AAGLACEG KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 354 EFSEKFPERYFDVSIAEQHSVTLAAGLACEGYKPVVAIYSTFLQRAYDQLLHDVALQNLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G+FD+ FM C+PNMV+M P+DE E   M+ T       P  
Sbjct: 414 VLFAIDRAGLVGADGATHAGTFDIAFMRCIPNMVIMTPADENECRQMLTTGFLHRAAPCA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNGIG+ +      +P  +GK  +  +G RVALL +GT +Q+ L A+  L++   
Sbjct: 474 VRYPRGNGIGIRVDQALTTLP--IGKAELRRQGHRVALLVFGTLLQTALEAAEQLDA--- 528

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KPLD+ ++ ++A+ H++++T+E+  I GG GS V ++L     +   V  
Sbjct: 529 --TVINMRFVKPLDNEMVLNMAQQHDLIVTIEDSCIMGGAGSAVSEYLHTQAQV---VPV 583

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPD +++HG  +  LA  GL  + I  +V
Sbjct: 584 LQLGLPDEFLEHGIQSQMLADCGLDVAGIVRSV 616


>gi|121596455|ref|YP_991107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
 gi|124381982|ref|YP_001025505.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10229]
 gi|126445825|ref|YP_001077568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10247]
 gi|238561513|ref|ZP_00441961.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
           horse 4]
 gi|251767135|ref|ZP_02266099.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           PRL-20]
 gi|254177253|ref|ZP_04883909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           10399]
 gi|254203075|ref|ZP_04909437.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
 gi|254359404|ref|ZP_04975676.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           2002721280]
 gi|121224253|gb|ABM47784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
 gi|126238679|gb|ABO01791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10247]
 gi|147746120|gb|EDK53198.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
 gi|148028591|gb|EDK86551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           2002721280]
 gi|160698293|gb|EDP88263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           10399]
 gi|238524498|gb|EEP87931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
           horse 4]
 gi|243063767|gb|EES45953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           PRL-20]
 gi|261826589|gb|ABM99911.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10229]
          Length = 651

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 334/637 (52%), Positives = 430/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 21  LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 80

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 81  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 140

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 141 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 198

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 199 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 249

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 250 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 306

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 307 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 366

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 367 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 426

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 427 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 485

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V     A +L  
Sbjct: 486 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAA 538

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+++LA++H+ L+TVEEG + GG GS  V+ + + G +  
Sbjct: 539 ADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRP 598

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 599 VLQ---LGLPDRFVDHGDPAKLLSLCGLDGDGIAKSI 632


>gi|53716443|ref|YP_105137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           23344]
 gi|53722783|ref|YP_111768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           K96243]
 gi|76819327|ref|YP_336000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710b]
 gi|126456504|ref|YP_001076424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106a]
 gi|167820730|ref|ZP_02452410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           91]
 gi|167829089|ref|ZP_02460560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           9]
 gi|167850566|ref|ZP_02476074.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           B7210]
 gi|167907502|ref|ZP_02494707.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           NCTC 13177]
 gi|226195571|ref|ZP_03791158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242313679|ref|ZP_04812696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106b]
 gi|254186153|ref|ZP_04892671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254194253|ref|ZP_04900685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           S13]
 gi|254208408|ref|ZP_04914757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
 gi|254263208|ref|ZP_04954073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710a]
 gi|254301206|ref|ZP_04968650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           406e]
 gi|81606250|sp|Q63JF4.1|DXS_BURPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|81684641|sp|Q62DU1.1|DXS_BURMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|119368198|sp|Q3JKA3.1|DXS_BURP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166198604|sp|A3P7W4.1|DXS_BURP0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|52213197|emb|CAH39237.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia pseudomallei
           K96243]
 gi|52422413|gb|AAU45983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           23344]
 gi|76583800|gb|ABA53274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710b]
 gi|126230272|gb|ABN93685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106a]
 gi|147751095|gb|EDK58163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
 gi|157810695|gb|EDO87865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           406e]
 gi|157933839|gb|EDO89509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651004|gb|EDS83697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           S13]
 gi|225932056|gb|EEH28056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242136918|gb|EES23321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106b]
 gi|254214210|gb|EET03595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710a]
          Length = 634

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 334/637 (52%), Positives = 430/637 (67%), Gaps = 32/637 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD M T+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PDDRIVWDVGHQTYPHKILTGRRDGMKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA+G  L G     +AVIGDGAMTAG A+EAMNNAG   D+ ++VILNDN  +S+  
Sbjct: 124 ALGMAIGSKLNGDDRFSIAVIGDGAMTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  P+ ELA K++E+A+GM+ 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVL-SVAPPVLELARKLEEHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTTPAKKTYTQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPERYYDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGAYDLAFLRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV        IPL  GKG +       +G+R+A+L +GT V     A +L  
Sbjct: 469 RYPRGAGTGVATVKAFTEIPL--GKGEVRRRTSQPDGKRIAILAFGTMV-----APSLAA 521

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           ++ L  TVA+ RF KP+D  L+++LA++H+ L+TVEEG + GG GS  V+ + + G +  
Sbjct: 522 ADALDATVANMRFVKPIDAELVQALARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRP 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   L LPDR++DHG PA  L+  GL    IA ++
Sbjct: 582 VLQ---LGLPDRFVDHGDPAKLLSLCGLDGDGIAKSI 615


>gi|374367606|ref|ZP_09625667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
           OR16]
 gi|373100909|gb|EHP41969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
           OR16]
          Length = 636

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 330/647 (51%), Positives = 431/647 (66%), Gaps = 39/647 (6%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+LK LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLKTIDDPAALRRLDRRQLKTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ+YPHKILTGRRD+MH++RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 65  PEDRVVWDVGHQSYPHKILTGRRDRMHSLRQWGGISGFPRRSESEYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G    G K   +AVIGDGAMTAG A+EAMNNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGARTLGEKRVSIAVIGDGAMTAGMAFEAMNNAGVYKDLPLLVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+S L+RL S +     +   KG+ +   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNSHLARLMSGKFYAATK---KGIERVLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPY 370
           +    +TLFEE G  YIGP+DGH+++ LV  L+ ++    +  GP  +HVVT+KG+GY  
Sbjct: 233 M--VPATLFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F E L   A  D  +VA+  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPSTKPARKTYTQVFGEWLCDMAAADPKLVAVTPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEKRFPNRYYDVGIAEQHAVTFAGGLACEGLKPVLAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ F+ C+PNM+VM P+DE E   ++ TA      
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAFLRCIPNMMVMTPADENECRQLLTTAYQ-QAC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI-----LIEGERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G GV        +P  VGKG +        G+RVA L +G+ +   L A+
Sbjct: 470 PTAVRYPRGAGSGVATEAALTALP--VGKGEMRRTGGARAGQRVAFLAFGSMLHPALGAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     +VA+ RF KPLD AL++ LA  H+ L+TVEEG + GG GS V++ LA  G
Sbjct: 528 EALDA-----SVANMRFVKPLDEALVKKLASEHDYLVTVEEGCVMGGAGSAVLEALAAAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV---FNI 708
           +    V    L LPDR++DHG PA  LAQ GL    I  +V   FN+
Sbjct: 583 I---AVPVLQLGLPDRFVDHGDPAFLLAQCGLDAKGIEQSVRERFNL 626


>gi|224825911|ref|ZP_03699015.1| deoxyxylulose-5-phosphate synthase [Pseudogulbenkiania ferrooxidans
           2002]
 gi|224602135|gb|EEG08314.1| deoxyxylulose-5-phosphate synthase [Pseudogulbenkiania ferrooxidans
           2002]
          Length = 618

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 334/634 (52%), Positives = 426/634 (67%), Gaps = 28/634 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTINYP  +K L+  EL QLA ELR  ++ +VSKTGGH  S+LG IELT+ALHYVF+
Sbjct: 3   PLLDTINYPADLKRLARHELPQLAGELRQFLVESVSKTGGHFASNLGSIELTIALHYVFD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRR  MHTMRQ  GL+GF KR ESEYD FG GHSSTSIS
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRSMMHTMRQKGGLAGFPKREESEYDTFGVGHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA     +G +   VA+IGDGAMTAGQA+EA+NNAG +D DM+VILNDN     P 
Sbjct: 123 AALGMAAAAKAQGIERKSVAIIGDGAMTAGQAFEALNNAGAMDLDMLVILNDNDMSISPN 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L++L S R    +++ +  V   I  P+ E+A+KV+E+ +GM  
Sbjct: 183 ---------VGALNNYLAKLMSGRFYAAMKQGSSKVLG-IAPPLREIASKVEEHVKGMF- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH++D LV  L+ +K+ K  GP  +H+VT+KG+GY  AE  
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDLDVLVDTLKNIKSLK--GPQFLHIVTKKGQGYKLAEND 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
              YHGV KFDPA G     S  ++ SYT  F + +   A+ D  +V I  AM  G+GL 
Sbjct: 289 PVAYHGVTKFDPANGLSGGKSGSSKPSYTQIFGDWICDMAKHDTRLVGITPAMREGSGLV 348

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P R FDV IAEQHAVTFAAGLAC+G+KP  AIYS+F+QR YDQ++HDV LQ LP
Sbjct: 349 RFEKEHPDRYFDVAIAEQHAVTFAAGLACDGMKPVVAIYSTFLQRGYDQLIHDVALQNLP 408

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADGPTH G+FD++++ C+PNM VMAPSDE E   M+ TA  + D P+ 
Sbjct: 409 VVFAIDRAGLVGADGPTHAGAFDISYLRCIPNMTVMAPSDENECRQMLYTAFTL-DTPTA 467

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAASALLESNG 612
            RYPRG G G  +      +P  +G+G I  +G+ RVA+L +G+ V   L A+   ++  
Sbjct: 468 VRYPRGTGPGAHIQHEMSALP--IGRGHIRRQGQGRVAILAFGSMVTPALQAAEAFDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KPLD  LI+SLA+SHE+++TVEE  + GG GS  V+ +   G+   T  
Sbjct: 524 ---TVADMRFVKPLDTGLIKSLAESHELIVTVEENVVMGGAGSACVEAIEAQGI---TAP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD Y++HG PA  LA  GL    I A++
Sbjct: 578 VLQLGLPDDYVEHGDPALLLADCGLDAKGIEASI 611


>gi|119897489|ref|YP_932702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. BH72]
 gi|166198599|sp|A1K4R0.1|DXS_AZOSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|119669902|emb|CAL93815.1| probable 1-deoxy-D-xylulose 5-phosphate synthase [Azoarcus sp.
           BH72]
          Length = 619

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 330/638 (51%), Positives = 420/638 (65%), Gaps = 34/638 (5%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P P L+ I  P  ++    REL Q+A ELRA +I +VSKTGGHL S+LG +ELT+ALHYV
Sbjct: 3   PYPHLERIGSPADLRATERRELAQVASELRAFLIESVSKTGGHLSSNLGTVELTIALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           FN P DRI+WDVGHQTY HKILTGRR+ M  +R   G+SGF +R ESEYD FGT HSSTS
Sbjct: 63  FNTPDDRIVWDVGHQTYGHKILTGRREAMSGLRHWGGISGFPRRCESEYDTFGTAHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           ISA LGMAV    +G     +AVIGDGAM+AG A+EA+NNAG +D++++VILNDN ++S+
Sbjct: 123 ISAALGMAVAARDRGEDRRAIAVIGDGAMSAGMAFEALNNAGDMDANLLVILNDN-EMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S       R V + V   +  PM ELA KV+EYA+GM
Sbjct: 182 S--------PPVGALTKILARLMSGSTYNAARRVGEKVLGTV-PPMAELARKVEEYAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           I  +  TLFEE G +Y GP+DGH++D L+  L+ ++  K  GP  +HV+T+KG+GY  AE
Sbjct: 233 I--APGTLFEEFGFHYYGPIDGHDLDALIPTLQNIRKLK--GPQFLHVITKKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHGV+KFD   G Q   S    +YT  F++ L   A  D  +V I  AM  G+GL
Sbjct: 289 ADPILYHGVSKFDHTAGIQTGKSGGKLTYTQVFSDWLCDIAAADPRIVGITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R +DVGIAEQHA+TFAAGLACEGLKP  AIYS+F+QRAYDQ++HD+ LQ L
Sbjct: 349 VEFAQRFPDRYYDVGIAEQHALTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDIALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DR GLVGADG TH G+FD++F+AC+PN+VVMAP+DE E   M+ TA    D P+
Sbjct: 409 PVVLAIDRGGLVGADGATHHGAFDLSFLACVPNLVVMAPADENECRQMLYTAVC-HDGPT 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV   P      L +GKG I   G R+A+L +G+ +   L     L++  
Sbjct: 468 AVRYPRGGGSGVV--PLEPMTALPIGKGEIRRHGTRIAVLAFGSMLGVALEVGEALDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVK 671
              +VA+ RF KPLD ALI  LA +H +L+TVEE + IGG GS V +F+        T+ 
Sbjct: 524 ---SVANMRFVKPLDEALIAELAANHALLVTVEENAVIGGAGSEVARFV-------DTLP 573

Query: 672 WRPLV----LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            RP V    LPDR+IDHG  A  LA  GL  + I A +
Sbjct: 574 QRPRVLRLGLPDRFIDHGDQAQLLASVGLDKTGILAAI 611


>gi|398832980|ref|ZP_10591126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
 gi|398222367|gb|EJN08744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
          Length = 636

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 331/655 (50%), Positives = 443/655 (67%), Gaps = 30/655 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           + H+    + LL+TIN P  ++ LS ++LK LA+ELR  V+ +VSKTGGHL S+LG +EL
Sbjct: 7   QTHTNDTHSMLLNTINEPADLRRLSRQQLKPLAEELRGFVLDSVSKTGGHLSSNLGTVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVFN P DRI+WDVGHQTYPHKILTGRR++M ++RQ DG+SGF +R ES+YD FG
Sbjct: 67  TLALHYVFNTPHDRIVWDVGHQTYPHKILTGRRERMSSLRQQDGISGFPRRDESDYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVIL 244
           T HSSTSISA LGMA+    +G   + +AVIGDGAMTAG A+EA+NNAG + D +++VIL
Sbjct: 127 TAHSSTSISAALGMALAARTQGSDRHAIAVIGDGAMTAGMAFEALNNAGVHDDVNLLVIL 186

Query: 245 NDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAK 304
           NDN  +S+         PPVGAL+  L+RL S +   + R+V K V   + GP+ ELA +
Sbjct: 187 NDN-DMSIS--------PPVGALNRYLARLMSGKFYAKARDVGKSV---LPGPVLELAKR 234

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
           ++E+A+GM+    +T+FEE G  YIGP+DGH++D L+  L+ +K  K  GP  +HVVT K
Sbjct: 235 LEEHAKGMV--VPATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKQLK--GPQFLHVVTRK 290

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+GY  AE     YHG  KF+P+ G +  +S++  +YT  F E L   A  D+  V I  
Sbjct: 291 GQGYKLAEADPVLYHGPGKFNPSEGIKPSTSSKA-TYTQVFGEWLCDMAGADQRAVGITP 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+G+  F ++FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++
Sbjct: 350 AMREGSGMVAFEKQFPQRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLI 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ L V FA+DRAGLVGADG TH G++D+ F+ C+PNMVVMA SDE E   M++TA
Sbjct: 410 HDVALQNLDVTFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRQMLSTA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
                 P+  RYPRG G+G  +    + +PL  G+G +  +G  +A+L +GT V     A
Sbjct: 470 YQYPG-PAAVRYPRGAGVGAVVQKSLETLPL--GRGEVRRQGRGIAILAFGTMV-----A 521

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL   + L  TVA+ RF KPLD  L+R LA  H+ L+TVEEG I GG G+ V + LA  
Sbjct: 522 PALQAGDKLNATVANMRFVKPLDVDLVRQLAADHDALVTVEEGCIMGGAGAAVSEALAAA 581

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           G++   +    L LPDR+IDHG  A  L Q GL  + IAA++    G+ +  L +
Sbjct: 582 GIVKPILH---LGLPDRFIDHGDAAQLLVQCGLDGAGIAASIVERFGKDQPRLVV 633


>gi|347540555|ref|YP_004847980.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudogulbenkiania sp.
           NH8B]
 gi|345643733|dbj|BAK77566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudogulbenkiania sp.
           NH8B]
          Length = 618

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 332/634 (52%), Positives = 425/634 (67%), Gaps = 28/634 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTINYP  +K L+  EL QLA ELR  ++ +VSKTGGH  S+LG IELT+ALHYVF+
Sbjct: 3   PLLDTINYPADLKRLARHELPQLAGELRQFLVESVSKTGGHFASNLGSIELTIALHYVFD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRR  MHTMRQ  GL+GF KR ESEYD FG GHSSTSIS
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRGMMHTMRQKGGLAGFPKREESEYDTFGVGHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA     +G +   VA+IGDGAMTAGQA+EA+NNAG +D DM+V+LNDN     P 
Sbjct: 123 AALGMAAAAKAQGIERKSVAIIGDGAMTAGQAFEALNNAGAMDLDMLVVLNDNDMSISPN 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L++L S R    +++ +  V   I  P+ E+A+KV+E+ +GM  
Sbjct: 183 ---------VGALNNYLAKLMSGRFYAAMKQGSSKVLG-IAPPLREIASKVEEHVKGMF- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH++  LV  L+ +K+ K  GP  +H+VT+KG+GY  AE  
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDLHVLVDTLKNIKSLK--GPQFLHIVTKKGQGYKLAEND 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
              YHGV KFDPA G     S  ++ SYT  F + +   A+ D  +V I  AM  G+GL 
Sbjct: 289 PVAYHGVTKFDPANGLSGGKSGNSKPSYTQIFGDWICDMAKHDTRLVGITPAMREGSGLV 348

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P R FDV IAEQHAVTFAAGLAC+G+KP  AIYS+F+QR YDQ++HDV LQ LP
Sbjct: 349 RFEKEHPDRYFDVAIAEQHAVTFAAGLACDGMKPVVAIYSTFLQRGYDQLIHDVALQNLP 408

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADGPTH G+FD++++ C+PNM VMAPSDE E   M+ TA  + D P+ 
Sbjct: 409 VVFAIDRAGLVGADGPTHAGAFDISYLRCIPNMTVMAPSDENECRQMLYTAFTL-DTPTA 467

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAASALLESNG 612
            RYPRG G G  +      +P  +G+G I  +G+ RVA+L +G+ V   L A+   ++  
Sbjct: 468 VRYPRGTGPGAHIQHEMSALP--IGRGHIRRQGQGRVAILAFGSMVTPALQAAEAFDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KPLD  LI+SLA+SHE+++TVEE  + GG GS  V+ +   G+   T  
Sbjct: 524 ---TVADMRFVKPLDTGLIKSLAESHELIVTVEENVVMGGAGSACVEAIEALGI---TAP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD Y++HG PA  LA  GL    I A++
Sbjct: 578 VLQLGLPDDYVEHGDPALLLADCGLDAKGIEASI 611


>gi|121534495|ref|ZP_01666318.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
           Nor1]
 gi|121306988|gb|EAX47907.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
           Nor1]
          Length = 628

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 326/643 (50%), Positives = 441/643 (68%), Gaps = 25/643 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLDT+  P  +K LS+ EL+ LA E+R  +I  V+KTGGHL  +LGV+ELT+A+H VF
Sbjct: 2   TKLLDTMEQPGDLKKLSLNELENLASEVRELLIHTVAKTGGHLAPNLGVVELTIAIHKVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           ++P+D+I+WDVGHQ Y HK+LTGRR +  T+RQ  GLSGF KRSESE+D FGTGHSSTSI
Sbjct: 62  DSPRDKIIWDVGHQAYVHKLLTGRRAQFETLRQLGGLSGFPKRSESEHDVFGTGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           S+ LGMA+ RDL G K +VVAVIGDG++T GQAYEA+N+AG++ S++ VILNDN ++S+ 
Sbjct: 122 SSALGMALARDLLGAKYHVVAVIGDGSLTGGQAYEALNHAGHMGSNLTVILNDN-EMSIA 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKVDEYAR 310
                     VGA+S  L+R+++      ++   + + ++   IG  + + A +V +  +
Sbjct: 181 KN--------VGAMSQYLARMRTAPTYSRVKHDIEYLLRRIPAIGDSVAKTAERVKDSLK 232

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
            ++      +FEELG  YIGP+DGHN+  LV +L++ KN +  GPVLIHV+T+KG+GY  
Sbjct: 233 YLL--VPGVIFEELGFTYIGPIDGHNIASLVDVLQQAKNVR--GPVLIHVLTQKGKGYRP 288

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE  ADK+HGV  F   TG+  K+     +YT  F +AL+  AE D  ++AI AAM  GT
Sbjct: 289 AECNADKFHGVGPFCVETGEIIKNGV-NPTYTAVFGDALVELAEKDDRIIAITAAMPEGT 347

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F  RFP R FDVGIAE HAVT AAG+A +GL+P  AIYS+F+QRAYDQ+VHDV LQ
Sbjct: 348 GLKKFAARFPARFFDVGIAEPHAVTMAAGMATQGLRPVVAIYSTFLQRAYDQIVHDVCLQ 407

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAG+VG DGPTH G FD++F+  +PNMV+MAP DE EL HM+ TA  ++  
Sbjct: 408 NLPVVFALDRAGIVGEDGPTHHGVFDLSFLRHIPNMVIMAPKDENELRHMLHTALKLNC- 466

Query: 551 PSCFRYPRGNGIGVELPPGNKGIP-LEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           P   RYPRGNG+GV L   +K    LEVGK  I+ +G ++  L  G  V  CL A+A+LE
Sbjct: 467 PVAIRYPRGNGVGVSL---DKVFSLLEVGKAEIVQQGGKLTFLALGAMVGPCLEAAAILE 523

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
             G++  V +ARF KP D ALIR+LA+   +L+TVE+  + GGFGS V++++    L   
Sbjct: 524 KRGIKAGVVNARFAKPFDAALIRALARDPGMLVTVEDNVLTGGFGSAVLEYINSQNL--Q 581

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            VK   L LPD +++HGS  + LA+ GL  + IAA V N + +
Sbjct: 582 WVKLLRLGLPDTFVEHGSRQELLAKHGLDGAGIAAAVQNFINE 624


>gi|120610695|ref|YP_970373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
           AAC00-1]
 gi|166198591|sp|A1TNR1.1|DXS_ACIAC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120589159|gb|ABM32599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
           AAC00-1]
          Length = 622

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 322/626 (51%), Positives = 425/626 (67%), Gaps = 32/626 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL T+N P  ++ +S  +LK+LA ELRA V+ +VSKTGGHL S+LG +ELTVALH VF+
Sbjct: 7   PLLQTVNDPADLRRMSRAQLKELAAELRAFVLDSVSKTGGHLSSNLGTVELTVALHTVFD 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M T+RQ  GLSGF +R+ESEYD FGT HSSTSIS
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G     VA+IGDGAMTAG A+EA+NNAG  D++++VILNDN  +S+  
Sbjct: 127 AALGMAMAARQRGEDRRAVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG---PMHELAAKVDEYARG 311
                  PPVGAL+  L++L S     +    AK V K + G   P+ ELA + ++ A+G
Sbjct: 185 -------PPVGALNRYLAQLMSG----QFYAAAKNVGKTVLGPVPPLLELAKRFEQQAKG 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+    +TLFE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  A
Sbjct: 234 MV--LPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E     YHG  KFDP+ G    ++   Q++T  F + L   A  D  +V I  AM  G+G
Sbjct: 290 EADPVAYHGPGKFDPSVGLTKPATPPKQTFTQVFGQWLCDMAAQDDRLVGITPAMREGSG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           +  F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ 
Sbjct: 350 MVEFEKRFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQN 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   +++TA A  D P
Sbjct: 410 LPVVFALDRAGLVGADGATHAGAYDIPFVRCIPNMSIACPADERECRQLLSTAYA-QDHP 468

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG+G GV   PG +G+P   GKG +   G+R+A+L +GT +   L A   L++ 
Sbjct: 469 VAVRYPRGSGAGVAPLPGLEGLPF--GKGEVRRTGQRIAILAFGTLLYPALQAGETLDA- 525

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               TVA+ R+ KPLD AL+  +A  H+ L+TVEEG++ GG GS V + L   G+    +
Sbjct: 526 ----TVANMRWAKPLDTALLLEIAAGHDALVTVEEGAVLGGAGSAVCEALNAAGIQKPVL 581

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGL 696
           +   L LPD +I+HG PA  LA  GL
Sbjct: 582 Q---LGLPDVFIEHGDPARLLALQGL 604


>gi|221065760|ref|ZP_03541865.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
 gi|220710783|gb|EED66151.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
          Length = 622

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 321/633 (50%), Positives = 425/633 (67%), Gaps = 24/633 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           + LL  IN P  M+ LS  +LK LA ELR  VI +VS+TGGHL S+LG +ELTVALH VF
Sbjct: 6   SSLLHNINDPADMRGLSRAQLKTLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQTYPHKILTGRRD M T+RQ  GLSGF +R+ESEYD FGT HSSTSI
Sbjct: 66  NTPYDRIVWDVGHQTYPHKILTGRRDHMATLRQFGGLSGFPQRAESEYDTFGTAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+    KG     +AVIGDGAMTAG A+EA+NN G  D++++VILNDN  +S+ 
Sbjct: 126 SAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDN-DMSIS 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L++L S +   + R+V K V KQ+  P+ ELA ++++ A+GM+
Sbjct: 185 --------PPVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +T+FE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE 
Sbjct: 236 --VPATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLAEA 291

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KFDPA G    ++   Q++T  F   L   A  D+ +V I  AM  G+G+ 
Sbjct: 292 DPVAYHGPGKFDPAVGLVKSATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMV 351

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R +DVGIAEQHAVTFA G+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 352 EFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLP 411

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++ TA    D P C
Sbjct: 412 VVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLLTTAYE-QDHPVC 470

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+      +G+P   G+ R      +VA+L +GT +   L A+  L++   
Sbjct: 471 VRYPRGAGVGMTPLESLEGLPFGKGEMRRESSSRKVAILAFGTLLYPALQAAEALDA--- 527

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             +VA+ R+ KPLD AL+  +A  HE+++T+EEG + GG GS V++ LA +GL    ++ 
Sbjct: 528 --SVANMRWAKPLDEALLLKIAAEHELIVTLEEGCVMGGAGSAVMECLAANGLSRSVLQ- 584

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPD +I+HG PA  LA  GL  + I A++
Sbjct: 585 --LGLPDAFIEHGDPAKLLALQGLDAAGIEASI 615


>gi|114320537|ref|YP_742220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|122311762|sp|Q0A8V7.1|DXS_ALHEH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114226931|gb|ABI56730.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 628

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 325/623 (52%), Positives = 425/623 (68%), Gaps = 25/623 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  +  P  ++ L    L  LA ELR  ++ +V+++GGHL + LG +ELT+ALHYVFN
Sbjct: 9   PLLAQVPDPEALRTLPAHRLPALAKELRHYLLHSVARSGGHLAAGLGAVELTLALHYVFN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ YPHKILTGRR+++ T+R+  GL+GF KR+ES YD FG GHSSTSIS
Sbjct: 69  TPEDRLVWDVGHQCYPHKILTGRRERLGTIRKYGGLAGFPKRAESPYDTFGVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+     G +   VA+IGDG MTAG+A+EAMN+AG   +D++V+LNDN ++S+  
Sbjct: 129 AALGMALAARQAGEQRKAVAIIGDGGMTAGEAFEAMNHAGDAGADLLVVLNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGALS  L+R+ S R   +LR  +K V +++  P+HELA + +E+ +GM+ 
Sbjct: 188 N--------VGALSQHLTRILSGRWYHQLRSGSKEVLRRLPPPVHELARRTEEHLKGMV- 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEELG  Y GPVDGHNVD LV +L  + + +  GP L+HVVT KG+GY  AE+ 
Sbjct: 239 -VPGTLFEELGFQYFGPVDGHNVDALVEVLGNLAHQR--GPRLLHVVTCKGKGYRPAEQD 295

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV +FDP  G   K S  + +Y   F   L A AE D  +VAI  AM  G+G+  
Sbjct: 296 PIAYHGVGQFDPEQGLP-KKSGGSLAYNQVFGRWLCAMAEQDPRLVAITPAMREGSGMVE 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           + RRFP R  DVGIAEQHAVT AAGLACE +KP  AIYS+F+QR YDQ+VHDV LQ LPV
Sbjct: 355 YARRFPERYHDVGIAEQHAVTLAAGLACESVKPVLAIYSTFLQRGYDQLVHDVALQNLPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADGPTH GSFD++++ C+PNM + APSDEAE + +++T     D P   
Sbjct: 415 LFAVDRAGLVGADGPTHHGSFDLSYLRCVPNMTIAAPSDEAECWRLLSTGYH-HDGPFAV 473

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+G G  LP  +   PL +GKG     G R+A+L +GT V   LA +  L+     
Sbjct: 474 RYPRGSGPGAALPEADLD-PLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEALD----- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
           LTVAD RF +PLD ALIR LA +H++L+TVEE ++ GG GS V ++LA+ GL    V  R
Sbjct: 528 LTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAGL---DVPVR 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGL 696
            L LPDR++DHG+PA+ LA+ GL
Sbjct: 585 HLGLPDRFVDHGTPAELLAEVGL 607


>gi|326317941|ref|YP_004235613.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374777|gb|ADX47046.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 622

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 321/632 (50%), Positives = 427/632 (67%), Gaps = 26/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL T+N P  ++ +S  +LK+LA ELRA V+ +VSKTGGHL S+LG +ELTVALH VF+
Sbjct: 7   PLLQTVNDPADLRRMSRAQLKELAAELRAFVLDSVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M T+RQ  GLSGF +R+ESEYD FGT HSSTSIS
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G     VA+IGDGAMTAG A+EA+NNAG  D+D++VILNDN  +S+  
Sbjct: 127 AALGMALAARQRGEDRRAVAIIGDGAMTAGMAFEALNNAGVADADLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S       + V K V K +  P+ ELA + ++ A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGHFYAAAKNVGKTVLKPV-PPLLELAKRFEQQAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP+ G    ++   Q++T  F + L   A  D+ +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPSVGITPPATPPKQTFTQVFGQWLCDMAAQDERLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 353 FEKSFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   +++TA    D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSIACPADERECRQLLSTAYE-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+G GV   PG +G+P   GKG +   G+R+A+L +GT +   L A+  L++    
Sbjct: 472 RYPRGSGAGVAPLPGLEGLPF--GKGEVRRAGQRIAILAFGTLLYPALQAAETLDA---- 525

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ R+ KPLD AL+  +A  H+ L+TVEEG++ GG GS V + L   G+    ++  
Sbjct: 526 -TVANMRWAKPLDTALLLEIAAGHDALVTVEEGAVLGGAGSAVCEALNAAGIQKPVLQ-- 582

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPD +I+HG PA  LA  GL    I  ++
Sbjct: 583 -LGLPDVFIEHGDPARLLALQGLDAEGIVRSI 613


>gi|187478667|ref|YP_786691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella avium 197N]
 gi|118595495|sp|Q2KZ15.1|DXS_BORA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115423253|emb|CAJ49786.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella avium 197N]
          Length = 620

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 333/634 (52%), Positives = 423/634 (66%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T  LD I+ P  ++ L  R+LK +ADELRA V+ +VSKTGGHL S+LG +ELT+ALHYVF
Sbjct: 3   TEHLDRIHSPADLRKLDRRDLKPIADELRAFVLESVSKTGGHLSSNLGTVELTLALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQTYPHKILTGRRDRMATLRQEGGISGFPKRSESEYDDFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G     +AVIGDGAM+AG A+EAMNNAG   D +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVARQHIAVIGDGAMSAGMAFEAMNNAGVTSDINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + + K V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNMGKAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           I  + +T+FEE G  Y+GP+DGH++D L+  L+ +K  +  G   +HVVT KGRGY  AE
Sbjct: 233 I--TSATMFEEFGFNYVGPIDGHDLDALIPTLQNLKTLQ--GLQFLHVVTRKGRGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F   L  +AE D  +V I  AM  G+GL
Sbjct: 289 VDPVLYHGPGKFDPAVGIQAAKTPAKRTFTQVFGAWLCDQAEADPRLVGITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAGLACEG KP  AIYS+F+QR YDQVVHDV LQ L
Sbjct: 349 VEFEQRFPKRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQVVHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ F+ C+PNMV+  PSDE E   +++T  A    P+
Sbjct: 409 DVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVIATPSDENETRLLLSTCYAYPG-PA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G  +  G   +PL  GKG +   G R+A++G+GT V + LAA+  L++  
Sbjct: 468 SVRYPRGAGCGAAVSAGLDTVPL--GKGVVRRRGARIAIMGFGTLVPAALAAAEKLDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KPLD  L+R LA +HE L+T+E+ ++ GG GS V + L   GL   T+ 
Sbjct: 524 ---TVADMRFVKPLDVELLRELAATHEALVTLEDAAVMGGAGSAVTEALNMAGL---TLP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD +IDHG  A  LA  GL  + I  +V
Sbjct: 578 VLQLGLPDVFIDHGDQAALLAGVGLDAAGIERSV 611


>gi|299533200|ref|ZP_07046584.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           S44]
 gi|298718730|gb|EFI59703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           S44]
          Length = 622

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 320/633 (50%), Positives = 425/633 (67%), Gaps = 24/633 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           + LL  IN P  M+ LS  +LK LA ELR  VI +VS+TGGHL S+LG +ELTVALH VF
Sbjct: 6   SSLLHNINDPADMRGLSRSQLKSLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  GLSGF +R+ESEYD FGT HSSTSI
Sbjct: 66  NTPYDRIVWDVGHQTYPHKILTGRRDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+    KG     +AVIGDGAMTAG A+EA+NN G  D++++VILNDN  +S+ 
Sbjct: 126 SAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDN-DMSIS 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L++L S +   + R+V K V KQ+  P+ ELA ++++ A+GM+
Sbjct: 185 --------PPVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +T+FE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE 
Sbjct: 236 --VPATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLAEA 291

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KFDPA G    ++   Q++T  F   L   A  D+ +V I  AM  G+G+ 
Sbjct: 292 DPVAYHGPGKFDPAVGLVKPATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMV 351

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R +DVGIAEQHAVTFA G+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 352 EFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLP 411

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++ TA    D P C
Sbjct: 412 VVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLLTTAYE-QDHPVC 470

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GV      +G+P   G+ R     ++VA+L +G+ +   L A+  L++   
Sbjct: 471 VRYPRGAGVGVTPLESLEGLPFGKGEMRRESASKKVAILAFGSLLYPALQAAEALDA--- 527

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             +VA+ R+ KPLD  L+  +A  HE+++T+EEG + GG GS V++ LA  GL    ++ 
Sbjct: 528 --SVANMRWAKPLDEELLLQIAADHELIVTLEEGCVMGGAGSAVMESLAAHGLSKSVLQ- 584

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPD +I+HG PA  LA  GL  + I A++
Sbjct: 585 --LGLPDEFIEHGDPAKLLALQGLDAAGIEASI 615


>gi|264679658|ref|YP_003279565.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
 gi|262210171|gb|ACY34269.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
          Length = 622

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 320/631 (50%), Positives = 424/631 (67%), Gaps = 24/631 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  IN P  M+ LS  +LK LA ELR  VI +VS+TGGHL S+LG +ELTVALH VFN 
Sbjct: 8   LLHNINDPADMRGLSRSQLKSLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVFNT 67

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA
Sbjct: 68  PYDRIVWDVGHQTYPHKILTGRRDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISA 127

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    KG     +AVIGDGAMTAG A+EA+NN G  D++++VILNDN  +S+   
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDN-DMSIS-- 184

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL+  L++L S +   + R+V K V KQ+  P+ ELA ++++ A+GM+  
Sbjct: 185 ------PPVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMV-- 235

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
             +T+FE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE   
Sbjct: 236 VPATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADP 293

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHG  KFDPA G    ++   Q++T  F   L   A  D+ +V I  AM  G+G+  F
Sbjct: 294 VAYHGPGKFDPAVGLVKPATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMVEF 353

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +RFP R +DVGIAEQHAVTFA G+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV 
Sbjct: 354 HKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVV 413

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++ TA    D P C R
Sbjct: 414 FALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLLTTAYE-QDHPVCVR 472

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+GV      +G+P   G+ R     ++VA+L +G+ +   L A+  L++     
Sbjct: 473 YPRGAGVGVTPLESLEGLPFGKGEMRRESASKKVAILAFGSLLYPALQAAEALDA----- 527

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           +VA+ R+ KPLD  L+  +A  HE+++T+EEG + GG GS V++ LA  GL    ++   
Sbjct: 528 SVANMRWAKPLDEELLLQIAADHELIVTLEEGCVMGGAGSAVMESLAAHGLSKSVLQ--- 584

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPD +I+HG PA  LA  GL  + I A++
Sbjct: 585 LGLPDEFIEHGDPAKLLALQGLDAAGIEASI 615


>gi|152979790|ref|YP_001352021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
           Marseille]
 gi|151279867|gb|ABR88277.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
           Marseille]
          Length = 621

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 332/647 (51%), Positives = 431/647 (66%), Gaps = 34/647 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  ++ L+  +LKQLADELRA V+ +VS TGGHL S+LG +ELT+ALH VFN 
Sbjct: 3   LLETINDPADVRQLTRPQLKQLADELRAFVLESVSATGGHLSSNLGTVELTIALHNVFNT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+MH++RQ DG+SGF +R ES YD FGT HSSTSISA
Sbjct: 63  PEDRIIWDVGHQTYPHKILTGRRDQMHSLRQIDGISGFPRRDESPYDTFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+    KG   + +AVIGDGAMTAG A+EAMNNAG + D +++V+LNDN  +S+  
Sbjct: 123 ALGMALAAKTKGEDRHAIAVIGDGAMTAGMAFEAMNNAGIHDDINLLVVLNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     + V K V   +  PM ELA + +E+A+GMI 
Sbjct: 181 -------PPVGALNRYLARLMSGQFYAAAKNVGKTV---LPAPMRELAKRFEEHAKGMI- 229

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D L+  L+ +KN K  GP  +HVVT KG+GY  AE  
Sbjct: 230 -VPATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKNLK--GPQFLHVVTRKGQGYKLAEAD 286

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDPA G +  S+A+  +YT+ F + L   A  DK +V I  AM  G+G+  
Sbjct: 287 PVLYHGPGKFDPAEGIK-PSTAKKVTYTSVFGDWLCDMAAADKRLVGITPAMREGSGMVE 345

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F RRFP R +DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ L V
Sbjct: 346 FERRFPDRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDV 405

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DR+GLVGADG TH G++D+ ++ C+PNMVVMA SDE E   M++T       P+  
Sbjct: 406 TFALDRSGLVGADGATHAGNYDIAYLRCIPNMVVMAASDENECRQMLSTGFDYQG-PAAV 464

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG GIG ++      IPL  G G I  EG+ +A+L +GT V   L+A   L++    
Sbjct: 465 RYPRGGGIGAKVGTDLATIPL--GTGEIKREGKGIAILAFGTMVAPSLSAGEELDA---- 518

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
            TVA+ RF KPLD  L++ LA +H+ L+TVEEGSI G     V        +      +P
Sbjct: 519 -TVANMRFIKPLDVELLKRLAATHDALVTVEEGSIMGGAGAAVAEAMAAAGI-----VKP 572

Query: 675 LV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           L+   LPD++IDHG     LA  GL  + IA ++    G+ +  L +
Sbjct: 573 LLNLGLPDQFIDHGDAGKLLALCGLDAAGIATSIRKRFGKDQPRLVV 619


>gi|383757524|ref|YP_005436509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rubrivivax gelatinosus
           IL144]
 gi|381378193|dbj|BAL95010.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Rubrivivax gelatinosus
           IL144]
          Length = 628

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 329/646 (50%), Positives = 429/646 (66%), Gaps = 33/646 (5%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           LD+I  P  ++ +S  +L  LA E+R  V+  VS+TGGHLGS+LG +ELTVALHYVFN P
Sbjct: 5   LDSIQTPADLRRMSRSDLPGLAREVREFVLNTVSQTGGHLGSNLGTVELTVALHYVFNTP 64

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
            DRI+WDVGHQTYPHK+LTGRR++MHT+RQ  G++GF +R ESEYD F TGHSSTSISA 
Sbjct: 65  HDRIVWDVGHQTYPHKVLTGRRERMHTLRQLGGIAGFPRRDESEYDTFATGHSSTSISAA 124

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY----LDSDMIVILNDNKQVSL 252
           LGMA+    KG     +AVIGDG+MTAG A+EA+NNAG     +++D++V+LNDN  +S+
Sbjct: 125 LGMALAAKQKGEDRKAIAVIGDGSMTAGMAFEALNNAGVPHAGVNADILVVLNDN-DMSI 183

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S       RE AK V K    P+ ELA + +E+A+GM
Sbjct: 184 S--------PPVGALNKHLARLMSGNFYAAAREGAKAVLKA-APPLFELARRFEEHAKGM 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +     T+FEE G  Y+GP+DGH++D L+  LE ++N K  GP  +HVVT+KG GY  AE
Sbjct: 235 V--VPGTIFEEFGFNYVGPIDGHDLDALIPTLENLRNKK--GPQFLHVVTKKGYGYKMAE 290

Query: 373 KAADKYHGVA-KFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
               KYH  + +F+PA G   KSS    ++T  F + L   AE D+ +V I  AM  G+G
Sbjct: 291 ADPVKYHAASGRFNPAEGFP-KSSGGKPTFTQVFGQWLCDMAEADERLVGITPAMREGSG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           +  F +RFP R  DVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ+VHDV LQ 
Sbjct: 350 MVEFHKRFPRRYHDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLVHDVALQN 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DR G+VGADGPTH G +D+ F+ C+PN  ++APSDE E    + TA    D+P
Sbjct: 410 LPVVFALDRGGIVGADGPTHAGVYDIAFIRCIPNCALLAPSDENECRQALTTAYR-RDQP 468

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG+G G E+  G      E GKG +  EG+R+A+L +GT +   LAA+  L + 
Sbjct: 469 VAVRYPRGSGCGAEIETGLS--EWEWGKGVVRREGQRIAILAFGTLLHPALAAAEKLGA- 525

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               TV D RF KP+D AL+  +A+ HE L+TVEEG + GG GS V++ LA  G    T 
Sbjct: 526 ----TVVDMRFVKPMDEALVLEMARRHEALVTVEEGCVMGGAGSAVLECLAAAG---ATT 578

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
               L +PDR+++HG PA  L+  GL  + I A++    G +R AL
Sbjct: 579 PVLQLGIPDRFVEHGDPAKLLSMLGLDAAGIEASIRKRFG-SRPAL 623


>gi|30249148|ref|NP_841218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas europaea ATCC
           19718]
 gi|41016959|sp|Q82VD3.1|DXS_NITEU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|30180467|emb|CAD85072.1| Transketolase [Nitrosomonas europaea ATCC 19718]
          Length = 614

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 322/634 (50%), Positives = 426/634 (67%), Gaps = 31/634 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD I  P  ++ L   +L QLADELR  ++ +V+ TGGHL S+LG +ELT+ALHYVF+
Sbjct: 3   PLLDRIEIPAQLRTLKRNQLPQLADELRNFLVESVAGTGGHLSSNLGTVELTIALHYVFD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTY HKILTGRR  M  +R   G++GF +R ESEYD FGT HSSTSIS
Sbjct: 63  TPFDRLIWDVGHQTYAHKILTGRRTGMARLRMQGGIAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV   LKG K + +AVIGDGAM+AG A+EA+NNAG +D++++VILNDN  +S+  
Sbjct: 123 AALGMAVAARLKGVKQHAIAVIGDGAMSAGMAFEALNNAGVMDANLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG--GPMHELAAKVDEYARGM 312
                  PPVGAL++ L++L S R     R   +   K +G   P+ ELA + +E+ +GM
Sbjct: 181 -------PPVGALNNYLAKLMSGRFYATARRAGE---KMLGVVPPVLELAKRAEEHVKGM 230

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + STLFEE G  YIGP+DGH++D L+  L  +K  +  GP  +HVVT KG+GY  AE
Sbjct: 231 V--TPSTLFEEFGFNYIGPIDGHDLDILLTTLNNIK--QLDGPQFLHVVTRKGKGYKQAE 286

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           +    YHGV KF P  G   K SA+  +YT  F + L   A  D  ++ I  AM  G+GL
Sbjct: 287 EDPILYHGVGKFQPDQGIVSKPSAKL-AYTQIFGDWLCDMAAKDSRLIGITPAMREGSGL 345

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F + +P R FDVGIAEQHAVTFAAG ACEGLKP  AIYS+F+QRAYDQ++HDV +Q L
Sbjct: 346 VRFSKEYPDRYFDVGIAEQHAVTFAAGAACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNL 405

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAGLVGADGPTH GSFD++++ C+PN+ VM P+DE E   M+ TA  + D P+
Sbjct: 406 PVVFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVMTPADENECRQMLYTAFQL-DTPA 464

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG+G GV++    + IPL  GKG I  +G+++ALL +G+ +  CL A   L++  
Sbjct: 465 AVRYPRGSGPGVQIQQEMQTIPL--GKGEIRRQGKQIALLAFGSMLTPCLEAGDELDA-- 520

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TV + RF KPLD  L+ +LA  HE+L+T+EE +I GG GS V++ L+    LD  V+
Sbjct: 521 ---TVVNMRFVKPLDQELVATLAAEHELLVTIEENTIMGGAGSAVMESLSS---LDKNVR 574

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD +ID G PA  L+  GL  + I  ++
Sbjct: 575 LLQLGLPDSFIDQGDPAHMLSDCGLDKAGIIQSI 608


>gi|194290325|ref|YP_002006232.1| 1-deoxy-d-xylulose-5-phosphate synthase [Cupriavidus taiwanensis
           LMG 19424]
 gi|229813270|sp|B3R5H4.1|DXS_CUPTR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|193224160|emb|CAQ70169.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Cupriavidus taiwanensis LMG 19424]
          Length = 638

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 330/646 (51%), Positives = 431/646 (66%), Gaps = 36/646 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ L  REL+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNKIDAPADLRKLDRRELQTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+YPHKILTGRR++M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 65  PDDRLVWDVGHQSYPHKILTGRRERMRTLRQWGGISGFPRRSESEYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G    G+K   VAVIGDGAMTAG A+EA+NNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGARTLGQKRVSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KG+ K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRHLARLLSGQFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPY 370
           +    +TLFEE G  YIGP+DGH+++ LV  L+ ++    +  GP  +HVVT+KG+GY  
Sbjct: 233 M--VPATLFEEFGFNYIGPIDGHDLNSLVPTLQNIRERALEGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM PSDE E   ++ TA    D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLLTTAFQ-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           P+  RYPRG+G G  +       P+ VGKG +  E     G RV  L +G+ VQ  L A+
Sbjct: 470 PTAVRYPRGSGPGAAI--AADLAPVPVGKGVVRREAGARAGHRVGFLAFGSMVQPALGAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     TVAD RF KPLD AL++ LA  H+ L+TVEEGS+ GG GS V++ LA+ G
Sbjct: 528 EALDA-----TVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGSAVLEALAEAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +    +    L LPDR++DHG PA  L Q GL  + I  +V    G
Sbjct: 583 IDKPVLT---LGLPDRFVDHGDPAFLLQQCGLDAAGIERSVRERFG 625


>gi|34498147|ref|NP_902362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
 gi|41016944|sp|Q7NUK5.1|DXS_CHRVO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|34104002|gb|AAQ60362.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
          Length = 616

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 328/633 (51%), Positives = 425/633 (67%), Gaps = 27/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ IN P  ++ L   +L QLA ELR  ++ +VSKTGGH  S+LG IELT+ALHYVF+
Sbjct: 3   PLLENINSPADLRLLPRTQLPQLAGELREFLVESVSKTGGHFASNLGSIELTIALHYVFD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRR++MHTMRQ +GL+GF KR ESEYD FG GHSSTSI 
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRERMHTMRQHNGLAGFPKREESEYDTFGVGHSSTSIG 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV     G     VA+IGDGAMTAGQA+EA+NNAG +D+D++VILNDN     P 
Sbjct: 123 AALGMAVAAKTLGVDRKSVAIIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNDMSISPN 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L++L S R    +RE +  V   I  P+ E+A+KV+E+ +G   
Sbjct: 183 ---------VGALNNYLAKLMSGRFYAAMREGSSKVLG-IAPPLKEIASKVEEHVKGFF- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH+VD LV  L+ +++ K  GP  +H+VT+KG+GY  AE  
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDVDVLVDTLKNIRSLK--GPQFLHIVTKKGQGYKLAEND 288

Query: 375 ADKYHGVAKFDPATG-KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
             KYHGV KFDPA G    K  A    YT  F + L   A++DK +V I  AM  G+G+ 
Sbjct: 289 PVKYHGVTKFDPANGLASGKGGAGKPQYTQVFGDWLCDMAKLDKRLVGITPAMREGSGMV 348

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P R +DV IAEQHAVTFA G+AC+GLKP  AIYS+F+QR YDQ++HDV LQ LP
Sbjct: 349 RFEKEHPDRYYDVAIAEQHAVTFAGGMACDGLKPVVAIYSTFLQRGYDQLIHDVALQNLP 408

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADGPTH G+FD++++ C+PNM VMAPSDE E   ++ TA  + D P+ 
Sbjct: 409 VMFALDRAGLVGADGPTHAGAFDLSYLRCIPNMTVMAPSDENECRQLLYTAFQL-DTPTA 467

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G E+      +P  +GKG +   G++VA+L +G+ V   LAA+  L++   
Sbjct: 468 VRYPRGTGPGAEIQQQMAALP--IGKGVVRRRGKQVAILAFGSMVHPALAAAEALDA--- 522

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TVAD RF KPLD  LIR LA++HE+++TVEE  + GG GS   + L   GL   T+  
Sbjct: 523 --TVADMRFVKPLDAELIRKLAQTHELIVTVEENVVMGGAGSGCGEALQAMGLAVPTLH- 579

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPD Y++HG PA  L+  GL  + I  ++
Sbjct: 580 --LGLPDDYVEHGDPALLLSLCGLDAAGIEKSI 610


>gi|418531678|ref|ZP_13097589.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           ATCC 11996]
 gi|371451180|gb|EHN64221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           ATCC 11996]
          Length = 622

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 320/633 (50%), Positives = 425/633 (67%), Gaps = 24/633 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           + LL  IN P  M+ LS  +LK LA ELR  VI +VS+TGGHL S+LG +ELTVALH VF
Sbjct: 6   SSLLHNINDPADMRGLSRSQLKSLAAELRTYVIDSVSRTGGHLSSNLGTVELTVALHSVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQTYPHKILTGRRD+M T+RQ  GLSGF +R+ESEYD FGT HSSTSI
Sbjct: 66  NTPYDRIVWDVGHQTYPHKILTGRRDRMGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSI 125

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+    KG     +AVIGDGAMTAG A+EA+NN G  D++++VILNDN  +S+ 
Sbjct: 126 SAALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNGGVHDANLLVILNDN-DMSIS 184

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L++L S +   + R+V K V KQ+  P+ ELA ++++ A+GM+
Sbjct: 185 --------PPVGALNRYLAQLMSGQFYAKARDVGKSVLKQV-PPLLELAKRLEQQAKGMV 235

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +T+FE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE 
Sbjct: 236 --VPATMFEQFGFNYIGPIDGHDLDSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLAEA 291

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KFDPA G    ++   Q++T  F   L   A  D+ +V I  AM  G+G+ 
Sbjct: 292 DPVAYHGPGKFDPAVGLVKPATPAKQTFTQVFGHWLCDMAAKDQRLVGITPAMREGSGMV 351

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R +DVGIAEQHAVTFA G+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 352 EFHKRFPGRYYDVGIAEQHAVTFAGGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLP 411

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   +++TA      P C
Sbjct: 412 VVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERETRQLLSTAYE-QHHPVC 470

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GV      +G+P   G+ R     ++VA+L +G+ +   L A+  L++   
Sbjct: 471 VRYPRGAGVGVTPLESLEGLPFGKGEMRRESASKKVAILAFGSLLYPALQAAEALDA--- 527

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             +VA+ R+ KPLD  L+  +A  HE+++T+EEG I GG GS V++ LA  GL    ++ 
Sbjct: 528 --SVANMRWAKPLDEELLLQIAAEHELIVTLEEGCIMGGAGSAVMESLAAHGLSKSVLQ- 584

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPD +I+HG PA  LA  GL  + I A++
Sbjct: 585 --LGLPDEFIEHGDPAKLLALQGLDAAGIEASI 615


>gi|91787629|ref|YP_548581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
 gi|118595599|sp|Q12CQ9.1|DXS_POLSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91696854|gb|ABE43683.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
          Length = 635

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 330/641 (51%), Positives = 427/641 (66%), Gaps = 33/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+TIN P  ++ L   +LK LADELRA V+ +VSKTGGHL S+LG +ELTVALHYVFN
Sbjct: 3   PLLETINSPADLRRLPRAQLKALADELRAFVLDSVSKTGGHLSSNLGTVELTVALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M ++RQ  GLSGF +R ES YD FGT HSSTSIS
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRDRMGSLRQFGGLSGFPRRDESPYDTFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLP 253
           A LGMA+    +G   + VA+IGDGAM+AG A+EA+NNAG + D  ++V+LNDN  +S+ 
Sbjct: 123 AALGMALAAHQQGEDRHAVAIIGDGAMSAGMAFEALNNAGVHDDCKLLVVLNDN-DMSIS 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L++L S R     + V K V + +  P+ ELA +++ +A+GM+
Sbjct: 182 --------PPVGALNRYLAQLMSGRFYASAKNVGKQVLR-VAPPLLELAKRLEAHAKGMV 232

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +TLFE  G  YIGP+DGH+++ L+  LE +K+ K  GP  +HVVT+KG+GY  AE 
Sbjct: 233 --VPATLFENFGFNYIGPIDGHDLESLIPTLENIKHLK--GPQFLHVVTKKGQGYKLAEA 288

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KFDPA G Q  S+   +++T  F + L   AE DK +V I  AM  G+G+ 
Sbjct: 289 DPVAYHGPGKFDPAMGLQKSSAPAKRTFTQVFGQWLCDMAEQDKRLVGITPAMREGSGMV 348

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R  DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ LP
Sbjct: 349 EFHKRFPGRYHDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLP 408

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM V  P+DE E   ++++A    + P  
Sbjct: 409 VVFALDRAGLVGADGATHAGAYDIPFLRCIPNMSVACPADENECRKLLSSAFE-QNHPVA 467

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GVE  PG +  PL  GKG I  EG  VA+L +GT +   L A     +  L
Sbjct: 468 VRYPRGAGAGVEPEPGLQ--PLPFGKGEIRREGSGVAILAFGTLLYPALQA-----AEKL 520

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
            +TV + R+ KPLD  L+  +A SHE L+T+EEG+I GG GS V + L   GL       
Sbjct: 521 GVTVVNMRWAKPLDTELLLKVAASHEALVTLEEGAIMGGAGSAVGEALQAAGL------G 574

Query: 673 RPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +PL+   L D +I+HG PA  LA  GL  + I A V    G
Sbjct: 575 KPLLQLGLKDEFIEHGDPAKLLALQGLDAAGIEAAVMARFG 615


>gi|94311551|ref|YP_584761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus metallidurans
           CH34]
 gi|118595608|sp|Q1LK34.1|DXS_RALME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|93355403|gb|ABF09492.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Cupriavidus metallidurans CH34]
          Length = 637

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 325/656 (49%), Positives = 437/656 (66%), Gaps = 36/656 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ L  R+L  LA+ELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 5   LLNKIDDPADLRKLDRRQLDTLAEELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFDT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+YPHKILTGRRD+M T+RQ  G+SGF +R+ESEYD FGT HSSTSISA
Sbjct: 65  PNDRVVWDVGHQSYPHKILTGRRDRMSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G K   +AVIGDGAMTAG A+EAMNNAG Y D  M+V+LNDN  +S+  
Sbjct: 125 ALGMALGARTRGEKRVGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVG L+  L+RL S +     +   KG+ K   +  P+ E A +++E+A+GM
Sbjct: 183 -------PPVGMLNKHLARLMSGQFYAATK---KGIEKVLSVAPPVLEFAKRLEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
           +    +TLFEE G  Y+GP+DGH+++ LV  L+ ++       GP  +HVVT+KG+GY  
Sbjct: 233 V--VPATLFEEFGFDYVGPIDGHDLESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F E L   A  DK ++ +  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPSAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G +D+ F+ C+PNM+VM P+DE E   ++ TA    D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLLTTAFQ-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G+GV   P    +P  VGKG I  E     G+RVA++ +G+ V   L A+
Sbjct: 470 PTAVRYPRGAGVGVATQPELTALP--VGKGEIRREGHARAGQRVAIMAFGSMVHPALTAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDG 664
             L++     TVA+ RF KPLD  L++ LA +H+ L+TVEEG ++GG GS V++ LA+ G
Sbjct: 528 EQLDA-----TVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           +   T+    L LPD++IDHG PA  L+  GL  + I  +V      T + +++ S
Sbjct: 583 IELPTLV---LGLPDKFIDHGDPAHLLSLCGLDAAGIERSVRERFSLTAQPVKVAS 635


>gi|332524232|ref|ZP_08400458.1| deoxyxylulose-5-phosphate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332107567|gb|EGJ08791.1| deoxyxylulose-5-phosphate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 628

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 324/638 (50%), Positives = 426/638 (66%), Gaps = 32/638 (5%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           + +LD+I  P  ++ +S  +L  LA E+R  V+  VS+TGGHLGS+LG +ELTVALHYVF
Sbjct: 2   SKILDSIQTPADLRRMSRSDLPGLAREVREFVLNTVSQTGGHLGSNLGTVELTVALHYVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQTYPHK+LTGRR++MHT+RQ  G++GF +R ESEYD F TGHSSTSI
Sbjct: 62  NTPHDRIVWDVGHQTYPHKVLTGRRERMHTLRQLGGIAGFPRRDESEYDTFATGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGY----LDSDMIVILNDNKQ 249
           SA LGMA+    KG     +AVIGDG+MTAG A+EA+NNAG     +++D++VILNDN  
Sbjct: 122 SAALGMALAAKQKGEDRKAIAVIGDGSMTAGMAFEALNNAGVPHAGVNADILVILNDN-D 180

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         PPVGAL+  L+RL S       RE  KGV K    P+ ELA + +E+A
Sbjct: 181 MSIS--------PPVGALNKHLARLMSGNFYAAAREGVKGVLKA-APPLFELARRFEEHA 231

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GM+     T+FEE G  Y+GP+DGH++D L+  LE ++N K  GP  +HVVT+KG GY 
Sbjct: 232 KGMV--VPGTIFEEFGFNYVGPIDGHDLDALIPTLENLRNKK--GPQFLHVVTKKGYGYK 287

Query: 370 YAEKAADKYHGVA-KFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            AE    KYH  + +F+PA G   KSS    ++T  F + L   AE D+ +V I  AM  
Sbjct: 288 MAEADPVKYHAASGRFNPAEGFP-KSSGGKPTFTQVFGQWLCDMAEADERLVGITPAMRE 346

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+G+  F +RFP R  DVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ+VHDV 
Sbjct: 347 GSGMVEFHKRFPRRYHDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLVHDVA 406

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPV FA+DRAG+VGADGPTH G +D+ F+ C+PN  ++APSDE E    + TA    
Sbjct: 407 LQNLPVVFALDRAGIVGADGPTHAGVYDIAFIRCIPNCALLAPSDENECRQALTTAYR-R 465

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D+P   RYPRG+G G E+  G      E GKG +  EG+R+A+L +GT +   LAA+  L
Sbjct: 466 DQPVAVRYPRGSGCGAEIETGLG--EWEWGKGVVRREGQRIAILAFGTLLHPALAAAEKL 523

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
            +     TV D RF KP+D AL+  +A+ HE ++TVEEG + GG GS V++ LA  G+  
Sbjct: 524 GA-----TVVDMRFVKPMDEALVLEMARRHEAIVTVEEGCVMGGAGSAVLECLAAAGVTT 578

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             ++   L +PDR+ +HG P   L+  GL    I A++
Sbjct: 579 PVLQ---LGIPDRFTEHGDPNKLLSMMGLDAEGIEASI 613


>gi|319761831|ref|YP_004125768.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           BC]
 gi|330826309|ref|YP_004389612.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           K601]
 gi|317116392|gb|ADU98880.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           BC]
 gi|329311681|gb|AEB86096.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           K601]
          Length = 630

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 322/626 (51%), Positives = 424/626 (67%), Gaps = 32/626 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ +N P  ++ LS  ELK LA ELRA V+ +VSKTGGHL S+LG +ELTVALH VF+
Sbjct: 7   PLLERVNDPADLRRLSRAELKSLAGELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRR++M T+RQ  GLSGF +R+ESEYD FGT HSSTSIS
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPQRAESEYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG     +AVIGDGAMTAG A+EA+NNAG  D+D++VILNDN  +S+  
Sbjct: 127 AALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVADADLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +   + R+V K V +    P+ ELA ++++ A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGQFYAKARDVGKSVLRN-APPLLELAKRLEQQAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +++ K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIRSLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP  G    ++   Q++T  F + L   A  D+ +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMAAKDQRLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 353 FHQRFPGRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+P+M +  P+DE E   ++ TA    D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLLTTAYE-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G+GV    G +G+P   GKG +  +G R+A+L +GT +   L A+  L++    
Sbjct: 472 RYPRGAGVGVAPLAGLEGLPF--GKGEVRRQGRRIAILAFGTLLYPALQAAEKLDA---- 525

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + R+ KPLD  L+  +A  HE L+TVEEG I GG GS V + L   G+L      R
Sbjct: 526 -TVVNMRWAKPLDTELLLRVAAEHEALVTVEEGCIMGGAGSAVGEALNAAGVL------R 578

Query: 674 PLV---LPDRYIDHGSPADQLAQAGL 696
           PL+   LPD +I+HG PA  LA  GL
Sbjct: 579 PLLQLGLPDAFIEHGDPARLLALQGL 604


>gi|430809187|ref|ZP_19436302.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
 gi|429498331|gb|EKZ96841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
          Length = 637

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 325/656 (49%), Positives = 437/656 (66%), Gaps = 36/656 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ L  R+L  LA+ELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 5   LLNKIDDPADLRKLDRRQLDTLAEELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFDT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+YPHKILTGRRD+M T+RQ  G+SGF +R+ESEYD FGT HSSTSISA
Sbjct: 65  PNDRVVWDVGHQSYPHKILTGRRDRMSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G K   +AVIGDGAMTAG A+EAMNNAG Y D  M+V+LNDN  +S+  
Sbjct: 125 ALGMALGARTRGEKRVGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVG L+  L+RL S +     +   KG+ K   +  P+ E A +++E+A+GM
Sbjct: 183 -------PPVGMLNKHLARLMSGQFYAATK---KGIEKVLSVAPPVLEFAKRLEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPY 370
           +  +  TLFEE G  Y+GP+DGH+++ LV  L+ ++     G  P  +HVVT+KG+GY  
Sbjct: 233 VVPA--TLFEEFGFDYVGPIDGHDLESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F E L   A  DK ++ +  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPSAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G +D+ F+ C+PNM+VMAP+DE E   ++ TA    D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMAPADENECRQLLTTAFQ-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G+GV   P    +P  VGKG I  E     G+RVA++ +G+ V   L A+
Sbjct: 470 PTAVRYPRGAGVGVATQPELTALP--VGKGEIRREGHARAGQRVAIMAFGSMVHPALTAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDG 664
             L++     TVA+ RF KPLD  L++ LA +H+ L+TVEEG ++GG GS V++ LA+  
Sbjct: 528 EQLDA-----TVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAD 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           +   T+    L LPD++IDHG PA  L+  GL  + I  +V    G   + +++ S
Sbjct: 583 IALPTLV---LGLPDKFIDHGDPAHLLSLCGLDAAGIERSVRERFGLAAQPVKVAS 635


>gi|329908092|ref|ZP_08274827.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546762|gb|EGF31698.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 616

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 329/641 (51%), Positives = 427/641 (66%), Gaps = 35/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ IN P  ++ L   +L++LADELRA VI +VSKTGGHL S+LG +ELT+ALHYVFN
Sbjct: 2   PLLEKINQPADLRRLPRNQLRKLADELRAFVIDSVSKTGGHLSSNLGTVELTIALHYVFN 61

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+MHT+RQ DG+SGF +R+ESEYD FGT HSSTSIS
Sbjct: 62  TPEDRLVWDVGHQTYPHKILTGRRDQMHTLRQRDGISGFPRRAESEYDTFGTAHSSTSIS 121

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLP 253
           A LGMA+    KG   + VA+IGDGAMTAG  +EAMNNAG Y D +++VILNDN  +S+ 
Sbjct: 122 AALGMALAARTKGENRHAVAIIGDGAMTAGMVFEAMNNAGVYDDINLLVILNDN-DMSIS 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L+RL S +     R V K V   +  P+ ELA + +E+A+GM+
Sbjct: 181 --------PPVGALNQYLARLMSGKFYAAARNVGKSV---LPAPVLELAKRFEEHAKGMV 229

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +T+FEE G  YIGP+DGH++D L+  L+ +K+ K  GP  +HVVT+KG+GY  AE 
Sbjct: 230 --VPATMFEEFGFNYIGPIDGHDLDALIPTLQNLKHLK--GPQFLHVVTKKGQGYKLAEA 285

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KF+P  G +  +     +YT  F + L   A  DK ++ I  AM  G+G+ 
Sbjct: 286 DPVLYHGPGKFNPEVGIKPATVPAKMTYTQVFGDWLCDMAAQDKRLIGITPAMREGSGMV 345

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F ++FP R FDVGIAEQHAVTFAAG+A EGLKP  AIYS+F+QR YDQ++HDV LQ L 
Sbjct: 346 RFEQQFPARYFDVGIAEQHAVTFAAGMATEGLKPVLAIYSTFLQRGYDQLIHDVALQDLD 405

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNMVVMA SDE E   M+ T   +   P+ 
Sbjct: 406 VTFALDRAGLVGADGATHAGNYDMAFLRCIPNMVVMAASDENECRQML-TTGYLYPGPAA 464

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GV +      +P+  GK  +  +GERVA+L +GT V   L A   L +   
Sbjct: 465 VRYPRGAGPGVAITAPLTALPM--GKAEVRRQGERVAILAFGTMVAPSLVAGERLNA--- 519

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KPLD  L+R LA +H+ ++TVEEG++ GG GS V + LA  G++      
Sbjct: 520 --TVVNMRFVKPLDVELVRELALTHDAIVTVEEGALMGGAGSAVAEALAAAGMV------ 571

Query: 673 RPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           RP++   LPD++IDHG     LA  GL    I  +V    G
Sbjct: 572 RPILHLGLPDQFIDHGDVGQLLAGVGLDAEGIVRSVQQRFG 612


>gi|394988075|ref|ZP_10380913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
           skB26]
 gi|393792533|dbj|GAB70552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
           skB26]
          Length = 623

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 323/641 (50%), Positives = 433/641 (67%), Gaps = 30/641 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ IN P  ++ L  R+L QLA+ELR  +I +VSK+GGHL S+LG +ELT+ALHYVFN 
Sbjct: 7   LLEAINDPAELRALERRQLPQLAEELRTFLIESVSKSGGHLASNLGAVELTIALHYVFNT 66

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTY HKILTGRR+ M T+RQ  G++GF KR+ESEYD FG GHSSTSISA
Sbjct: 67  PDDRLVWDVGHQTYTHKILTGRREAMATLRQLGGIAGFPKRAESEYDAFGAGHSSTSISA 126

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV    +G     VA+IGDGAMT G A+EA+NNAG +D++++V+LNDN  +S+   
Sbjct: 127 ALGMAVAAQAEGSDRRAVAIIGDGAMTGGMAFEALNNAGAMDANLLVVLNDN-DMSISEN 185

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG--PMHELAAKVDEYARGMI 313
                   VGAL++ L++L S R    +R   KG  K +G   P+ ELA + +E+ +GM+
Sbjct: 186 --------VGALNNYLAKLMSGRFYSAMR---KGGEKVLGAVPPILELAKRAEEHMKGMV 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                TLFEE G  YIGP+DGH++D LV  L  +K+ +  GP L+H+ T+KG+GY  AE+
Sbjct: 235 --IPGTLFEEFGFNYIGPIDGHDLDVLVTTLSNLKHLQ--GPQLLHIATQKGKGYKLAEE 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGVAKF+P  G          +YT  F + L   A  DK +V I  AM  G+G+ 
Sbjct: 291 DPCLYHGVAKFNPEDGVSDAKPGGKLTYTQVFGDWLCDMAAQDKRLVGITPAMCEGSGMV 350

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F R +P R FDVGIAEQHA+TFAAG+ACEG+KP  AIYS+F+QRAYDQ++HD+ LQ LP
Sbjct: 351 RFAREYPKRYFDVGIAEQHALTFAAGIACEGMKPVVAIYSTFLQRAYDQLIHDIALQGLP 410

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           +  A+DRAGLVGADGPTH GSFD++F+ C+PN++VMAPSDE E   M+ T A + + PS 
Sbjct: 411 IVLAIDRAGLVGADGPTHAGSFDLSFLRCVPNLLVMAPSDENECRQMLYT-AFMHNGPSA 469

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+G+GV +    + +P  +GKG +  EGE++A+L +G+     + A AL  +  L
Sbjct: 470 VRYPRGSGMGVAIQQEMQALP--IGKGEVRREGEKIAILAFGS-----MLAPALAAAEEL 522

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
           + TVA+ RF KPLD  L   LA++H++L+TVEE ++ GG GS V++FL   G+   TV+ 
Sbjct: 523 KATVANMRFVKPLDEELTLRLAQTHDLLVTVEENAVMGGAGSAVLEFLESKGV---TVQV 579

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
             L LPDR+++HG P   LA  GL    I   V   L  T+
Sbjct: 580 LQLGLPDRFVEHGDPVKLLASCGLDQDGIVRAVQGRLHSTQ 620


>gi|288940188|ref|YP_003442428.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
 gi|288895560|gb|ADC61396.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
          Length = 634

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 327/633 (51%), Positives = 424/633 (66%), Gaps = 28/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD+I+ P  ++ LS  +L +LA ELR+ +I  VSKTGGHL + LGV+ELT+ LHYVF+
Sbjct: 17  PLLDSIDSPADLRALSESQLPELASELRSFLIECVSKTGGHLAAGLGVVELTLGLHYVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD+M T+RQ DG+SGF KR ESEYD FG GHSSTSIS
Sbjct: 77  TPHDRLVWDVGHQAYPHKILTGRRDRMCTLRQKDGISGFPKRGESEYDTFGVGHSSTSIS 136

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G +  V+A+IGDGA+ AG A+EA+N+AG +D D++VILNDN ++S+  
Sbjct: 137 AALGMALAAKQRGERRTVIAIIGDGALGAGMAFEALNHAGSMDIDLVVILNDN-EMSIS- 194

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                  PPVGA+S+ L+RL S +    +RE +K      G P +  L  + +E+ +GM+
Sbjct: 195 -------PPVGAISNHLARLLSGKLYTSVREGSKHALA--GMPQLRHLVGRWEEHMKGML 245

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               STLFEELG  YIGPVDGH++D L+  L  +K+    G  L+H+VT+KGRG+  AE 
Sbjct: 246 --MPSTLFEELGFNYIGPVDGHDMDGLLRTLRNIKDMP--GQRLLHIVTKKGRGFEPAEG 301

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV  FD  TG+  K+     +YT  F   L   A  D  +V I  AM  G+GL 
Sbjct: 302 QPVIYHGVTPFDRQTGQLLKAKGAGPTYTQIFGGWLHDTAAADPRLVGITPAMCEGSGLT 361

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R FDVGIAEQHAVT AAGLACEGLKP  AIYSSF+QRAYDQ+VHDV LQ L 
Sbjct: 362 AFSKRFPERYFDVGIAEQHAVTLAAGLACEGLKPVVAIYSSFLQRAYDQLVHDVALQNLD 421

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR GLVGADG TH G FD++F   +PN+V+M PS+E E   M+ TA   +  P+ 
Sbjct: 422 VTFAVDRGGLVGADGATHAGGFDLSFCRPIPNLVIMTPSNENECRRMLRTAYEYEG-PAL 480

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GV + P    +P  +G+G I+ EG R+ALL +G  V++ L A+ + ++   
Sbjct: 481 VRYPRGGGPGVAIDPNAPALP--IGRGEIVREGSRIALLAFGPLVKTALEAAEVFDA--- 535

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TVAD RF KPLD ALI  LA  HE+L+T+EE +I GG GS V + L++ G++   +  
Sbjct: 536 --TVADMRFVKPLDAALILDLAARHEILVTLEENAIAGGAGSGVAELLSEQGVVRRCLH- 592

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L LPDRYIDH    +QLA  GL    I A++
Sbjct: 593 --LGLPDRYIDHAEHHEQLASVGLDAPGIIASL 623


>gi|339484558|ref|YP_004696344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
 gi|338806703|gb|AEJ02945.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
          Length = 614

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 321/638 (50%), Positives = 423/638 (66%), Gaps = 27/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTI++P  ++ L  ++L Q+A ELR  +I +V+KTGGHL S+LG +ELT+ALHYVFN
Sbjct: 3   PLLDTISFPSQLRELDQKKLPQVAKELRGFLIESVAKTGGHLSSNLGTVELTIALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+I+WDVGHQTY HKILTGRR  M  +R   GL+GF +R ESEYD FGT HSSTSIS
Sbjct: 63  TPHDQIVWDVGHQTYAHKILTGRRSGMSKLRMQGGLAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV   L       +A+IGDGAM+AG A+EA+NNAG +D++++VILNDN  +S+  
Sbjct: 123 AALGMAVAAQLNKTDRRAIAIIGDGAMSAGMAFEALNNAGVMDANLLVILNDN-DMSISR 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                   PVGAL++ L++L S R     R   + V   +  PM ELA + +E+ +GM+ 
Sbjct: 182 --------PVGALNNYLAKLMSGRFYATARRAGEKVLGVV-PPMLELAKRAEEHVKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH++D L+  L  +K     GP  +HVVT KG GY  AE+ 
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDLDVLITTLNNIK--LLDGPQFLHVVTRKGAGYKVAEED 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G   KS+ +  +YT  F + L   A  D  ++ I  AM  G+GL  
Sbjct: 289 PILYHGVGKFDPEKGIIPKSAGKP-AYTQIFGDWLCDMAAQDSRLIGITPAMREGSGLVR 347

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P R FDVGIAEQHAVTFAAG AC+GLKP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 348 FSQEYPERYFDVGIAEQHAVTFAAGAACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 407

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADGPTH GSFD++++ C+PNM VMAP+DE E   M+ TA  + D P+  
Sbjct: 408 VFAIDRAGLVGADGPTHAGSFDLSYLRCIPNMTVMAPADENECRQMLYTAFQL-DTPTAV 466

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV++    K +P  +G+G I  +GER+ALL +G+ +  CL A+  L +    
Sbjct: 467 RYPRGTGSGVQVQKEMKALP--IGRGEIRRQGERIALLAFGSMLAPCLEAAEELNA---- 520

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD  L+ SLA SH++L+TVEE ++ GG GS V + L    +    VK  
Sbjct: 521 -TVINMRFIKPLDDDLVASLAASHDLLVTVEENTVMGGAGSAVTESLNSQRI---CVKVL 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +ID G  A  LA  GL+ + I  +V ++  +
Sbjct: 577 QLGLPDVFIDQGDHAQMLADCGLSKNGIIQSVRSVFSE 614


>gi|82701370|ref|YP_410936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
           ATCC 25196]
 gi|118595593|sp|Q2YCH7.1|DXS_NITMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82409435|gb|ABB73544.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
           ATCC 25196]
          Length = 614

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 323/625 (51%), Positives = 427/625 (68%), Gaps = 31/625 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+TI  P+ ++ L  + L QLADELR  ++ +V+KTGGHL S+LG +ELT+ALHYVFN
Sbjct: 3   PLLNTITDPVKLRALDRKLLPQLADELRQFLVESVAKTGGHLSSNLGTVELTIALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTY HKILTGRR+ M  +R   G++GF +R ESEYD FGT HSSTSIS
Sbjct: 63  TPYDRLVWDVGHQTYVHKILTGRREGMSKLRMRGGIAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV    +G+K +VVAVIGDGAM+AG A+EA+NNAG +D++++VILNDN  +S+  
Sbjct: 123 AALGMAVASQWEGKKRSVVAVIGDGAMSAGMAFEALNNAGAMDTNLLVILNDN-DMSISR 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH--ELAAKVDEYARGM 312
                   PVGAL++ L+RL S +     R   +   K +G   H  ELA + +E+ +GM
Sbjct: 182 --------PVGALNNYLARLMSGQFYATARRAGE---KMLGVVPHVLELAKRAEEHVKGM 230

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + STLFEE G  YIGP+DGH++D LV+ L  ++N +  GP  +HVVT KG GY  AE
Sbjct: 231 V--TPSTLFEEFGFNYIGPIDGHDLDVLVSTLNNIRNLR--GPQFLHVVTRKGAGYKAAE 286

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHGV +F+P  G   K+S +  SYT  F + L   A +D+ +V I  AM  G+G+
Sbjct: 287 DDPILYHGVTRFNPDAGIIPKASVKP-SYTQVFGDWLCDMAALDQRLVGITPAMREGSGM 345

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F   +  R FDVGIAEQHAVTFAAGLAC+GLKP  AIYS+F+QRAYDQ++HDV +Q L
Sbjct: 346 VRFSHEYADRYFDVGIAEQHAVTFAAGLACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNL 405

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAGLVGADGPTH GSFD+T++ C+PN+ VMAPSDE E   M+ TA  ++  P+
Sbjct: 406 PVVFAIDRAGLVGADGPTHAGSFDLTYLRCIPNITVMAPSDENECRQMLYTAFQMNT-PA 464

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG+G GV      + +PL  G+G I  EG  +ALL +G+ +Q CL A+  L +  
Sbjct: 465 AVRYPRGSGSGVAQQKEMQMLPL--GRGEIRREGAEIALLAFGSMLQPCLEAAEELNA-- 520

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVA+ RF KPLD  L+ SLA +HE+L+TVEE ++ GG GS V++ L+  G    TV 
Sbjct: 521 ---TVANMRFVKPLDDDLVASLAANHELLVTVEENTVMGGAGSAVLESLSARGR---TVP 574

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGL 696
              L LPD ++D G P+  L++ GL
Sbjct: 575 VLQLGLPDTFLDQGDPSQMLSECGL 599


>gi|393778038|ref|ZP_10366321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
 gi|392714924|gb|EIZ02515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
          Length = 642

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 324/641 (50%), Positives = 423/641 (65%), Gaps = 36/641 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LAD+LR  V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 7   LLNTIDSPSDLRKLDRRQLPALADQLRQFVLESVSQTGGHLSSNLGTVELTIALHYVFNT 66

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ+YPHKILTGRR++MHT+RQ DG+SGF +RSESEYD FGT HSSTSISA
Sbjct: 67  PEDRVVWDVGHQSYPHKILTGRRERMHTLRQLDGISGFPRRSESEYDTFGTAHSSTSISA 126

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   KG     +AVIGDGAMTAG A+EAMNNAG Y D  ++VILNDN  +S+  
Sbjct: 127 ALGMALGAKTKGEDRVAIAVIGDGAMTAGMAFEAMNNAGVYRDVPLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S R     +   KG+ K   +  P+ E A + +E+A+GM
Sbjct: 185 -------PPVGALNRYLARLMSGRFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGM 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH+++ LV  L+ ++       GP  +HVVT KG+GY  
Sbjct: 235 L--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRELAHAGRGPQFLHVVTRKGQGYKL 292

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KFDPA G +  +     +YT  F + L   A  D  +V I  AM  G+
Sbjct: 293 AEADPVLYHGPGKFDPAEGIRPAAKPSRPAYTKVFGDWLCDMAAADARLVGITPAMREGS 352

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F RRFP R +DVGIAEQHAVTFA GLACEG+KP  AIYS+F+QRAYDQ++HDV LQ
Sbjct: 353 GMVEFERRFPDRYYDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQRAYDQLIHDVALQ 412

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM++M P+DE E   M+ T     D 
Sbjct: 413 NLPVLFALDRAGLVGADGATHAGAYDIAYLRCIPNMLIMTPADENECRQMLTTGFR-HDG 471

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI-----LIEGERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G GV +      +P  VGKG +        G+R A+L +G+ +   LAA 
Sbjct: 472 PASVRYPRGAGPGVAVDAALSALP--VGKGEVRRTGHAPAGQRTAILAFGSMLHPALAAG 529

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     TV + RF KPLD  L+R+LA  H+  +TVEEG + GG GS  ++ LA   
Sbjct: 530 EALDA-----TVVNMRFVKPLDVELLRTLAADHDRFVTVEEGCVMGGAGSACLEALAA-- 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +D  +    L LPDR++DHG PA  LAQ GL    I A++
Sbjct: 583 -MDIALPVLQLGLPDRFVDHGDPALLLAQCGLDAKGIEASI 622


>gi|89901646|ref|YP_524117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens
           T118]
 gi|118595611|sp|Q21UG7.1|DXS_RHOFD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|89346383|gb|ABD70586.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens
           T118]
          Length = 632

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 323/632 (51%), Positives = 426/632 (67%), Gaps = 26/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TIN P  ++ +   +L  LADELRA ++ +V+KTGGHL S+LG +ELTVALHYVFN
Sbjct: 7   PLLHTINDPADLRLVPRAQLGALADELRAYLLHSVAKTGGHLSSNLGTVELTVALHYVFN 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRR++M T+RQ  GLSGF +R ESEYD FGT HSSTSIS
Sbjct: 67  TPHDRVVWDVGHQTYPHKILTGRRERMATLRQLGGLSGFPQRGESEYDDFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+   ++G +   +AVIGDGA+TAG A+EA+NNAG  D +++VILNDN  +S+  
Sbjct: 127 AALGMALAAKIRGEERYAIAVIGDGALTAGMAFEALNNAGVADCNLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +     + V K V K    P+ ELA +++E A+GM+ 
Sbjct: 185 -------PPVGALNRHLAKLMSGQFYAAAKNVGKTVLKG-APPLFELAKRLEESAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDALIPTLENIKHLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDPA G Q  +++  Q++T  F + L   A VD  +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPAVGLQAPATSPKQTFTQVFGQWLCDMAAVDPRLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QR YDQ++HDV +Q LPV
Sbjct: 353 FEQRFPQRFFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PN+ V  P+DE E   +++TA A  + P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFLRCIPNVSVACPADENECRQLLSTAFA-QNHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  +  G + +P   G+G I   G  VA+L +GT     L   AL  +  L 
Sbjct: 472 RYPRGAGAGTVVQAGLEALPF--GQGEIRRAGSSVAILAFGT-----LLHPALQVAEKLN 524

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
           +TV + R+ KPLD AL+  +A  H+ L+TVEEG+I GG GS V++ L   G+L   ++  
Sbjct: 525 VTVVNMRWVKPLDVALLLQVAADHDALVTVEEGAIMGGAGSAVLEALQAAGVLKPVLQ-- 582

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L L D +I+HG PA  LA  GL  + I A++
Sbjct: 583 -LGLRDEFIEHGDPAKLLALQGLDAAGIQASI 613


>gi|377813360|ref|YP_005042609.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
 gi|357938164|gb|AET91722.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
          Length = 638

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 329/639 (51%), Positives = 424/639 (66%), Gaps = 34/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRALDRRQLQPLADELRAYVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRR++M  +RQ  G+SGF +R+ESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRREQMPGLRQLGGISGFPRRTESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIANKLQGDNRFSIAVIGDGAMTAGMAFEAMNNAGVADDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V +    P+ +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLRH-APPVLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   A +D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPAATPSKKTYTQVFGEWLCDAAALDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGNYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QSNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-------GERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV        IP  VGKG I  E       G+R+A+  +GT V   LAA+  
Sbjct: 469 RYPRGAGTGVATVKQMTAIP--VGKGEIRRESSQKLGSGKRIAICAFGTMVAPSLAAAGE 526

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L+     LTVA+ RF KP+D  L+R LA +H+ ++T+EEGSI GG GS  V+ L   G++
Sbjct: 527 LD-----LTVANMRFVKPVDADLLRELAATHDAIVTIEEGSIMGGAGSACVEALLASGVI 581

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD +IDHG P   LA  GL  + I  ++
Sbjct: 582 KPVLQ---LGLPDVFIDHGDPGKLLASVGLDAAGIVRSI 617


>gi|388567038|ref|ZP_10153477.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
 gi|388265743|gb|EIK91294.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
          Length = 635

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/642 (49%), Positives = 426/642 (66%), Gaps = 26/642 (4%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P T LLD ++ P+ ++ L+  +LK LADELR  ++ +V++TGGHL S+LG +ELT+ALHY
Sbjct: 4   PITTLLDNVHSPVDLRRLARPQLKPLADELRQFLLNSVARTGGHLSSNLGTVELTIALHY 63

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P+DR++WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +R ES YD FGT HSST
Sbjct: 64  VFNTPEDRLVWDVGHQTYPHKILTGRRDRMDTLRQLGGISGFPRRDESPYDTFGTAHSST 123

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LGMA+    KG     VA+IGDGAMTAG A+EA+NNAG  D  ++VILNDN  +S
Sbjct: 124 SISAALGMAMAAKAKGEDRRAVAIIGDGAMTAGMAFEALNNAGVADGKLLVILNDN-DMS 182

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVGAL+  L++L S +     + + K V K    P+ ELA + ++ A+G
Sbjct: 183 IS--------PPVGALNRYLAQLMSGQFYAAAKHMGKQVLKG-APPLFELAKRFEQQAKG 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYP 369
           M+    +TLFE+ G  YIGP+DGH++D L+  LE ++       GP  +HVVT+KG+GY 
Sbjct: 234 MV--VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIRQLMDAHEGPQFLHVVTKKGQGYK 291

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE     YHG  KFDPA G    ++    ++T  F + L   A  D+ +V I  AM  G
Sbjct: 292 LAEADPVAYHGPGKFDPAVGLTKPATPPKTTFTQVFGQWLCDMAAADQRLVGITPAMREG 351

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           +G+  F RRFP R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV L
Sbjct: 352 SGMVEFERRFPDRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAL 411

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPV FA+DRAGLVGADG TH G++DV ++ C+P + V  P+DE E   +++TA A  +
Sbjct: 412 QNLPVVFALDRAGLVGADGATHAGAYDVAYLRCIPQVSVACPADEGECRQLLSTAFA-QN 470

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P   RYPRG G+G   P G +G+P   GKG +  +G  VA+L +GT +   LAA+  L 
Sbjct: 471 HPVAVRYPRGAGVGAAQPEGLQGLPF--GKGELRRKGRGVAILAFGTLLYPALAAAERLG 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDG 668
           +     +VA+ R+ KPLD  L+R +A++H  ++TVEEG ++GG GS V++ L  +GL   
Sbjct: 529 A-----SVANMRWVKPLDIELLREIARTHVAIVTVEEGCTMGGAGSAVMEALQAEGL--- 580

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            +    L LPD +I+HG PA  LA  GL  + I  +V    G
Sbjct: 581 QLPVLALGLPDDFIEHGDPAKLLALQGLDAAGIERSVRERFG 622


>gi|413965126|ref|ZP_11404352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. SJ98]
 gi|413927800|gb|EKS67089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. SJ98]
          Length = 638

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 329/639 (51%), Positives = 424/639 (66%), Gaps = 34/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRALDRRQLQPLADELRAYVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILTGRRD+M  +RQ  G+SGF +R+ESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTGRRDQMPGLRQLGGISGFPRRAESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+G     +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIANKLQGDNRFSIAVIGDGAMTAGMAFEAMNNAGVADDVPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V +    P+ +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLRH-APPVLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   A  D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTAPSKKTYTQVFGEWLCDAAAQDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGNYDLAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-------GERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV        IP  VGKG I  E       G+R+A+  +GT V   LAA+  
Sbjct: 469 RYPRGAGTGVATVKQMTAIP--VGKGEIRRESSQKLGSGKRIAICAFGTMVAPSLAAAEE 526

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L+     LTVA+ RF KP+D  L+R LA +H+ ++T+EEG+I GG GS  V+ L    ++
Sbjct: 527 LD-----LTVANMRFVKPVDADLLRELAATHDAIVTIEEGTIMGGAGSACVEALLASSIV 581

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD +IDHG PA  L+  GL  + IA ++
Sbjct: 582 KPVLQ---LGLPDVFIDHGDPAKLLSSVGLDAAGIAKSI 617


>gi|73540585|ref|YP_295105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
 gi|118595607|sp|Q474C2.1|DXS_RALEJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|72117998|gb|AAZ60261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
          Length = 638

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 326/646 (50%), Positives = 431/646 (66%), Gaps = 36/646 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  I+ P  ++ L  REL+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 5   LLKKIDAPADLRKLDRRELRTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFHT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+YPHKILTGRR++M+T+RQ  G+SGF +RSES+YD FGT HSSTSISA
Sbjct: 65  PDDRVVWDVGHQSYPHKILTGRRERMNTLRQFGGISGFPRRSESQYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G    G +   +AVIGDGAMTAG A+EA+NNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGARTLGEQRVSIAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KG+ K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNKHLARLLSGQFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPY 370
           +    +TLFEE G  YIGP+DGH++D LV  L+ ++    +  GP  +HVVT+KG+GY  
Sbjct: 233 M--VPATLFEEFGFNYIGPIDGHDLDSLVPTLQNIRKRALEGAGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F E L   A  DK ++ I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGEWLCDMAAADKRLIGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA G+ACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEKRFPERYYDVGIAEQHAVTFAGGMACEGLKPIVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM PSDE E   ++ TA    + 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLLTTAFH-QNC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI-----LIEGERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G GV      K +P  VGKG +        G+RVA LG+G+ V   L A+
Sbjct: 470 PTAVRYPRGAGQGVATEAVLKDVP--VGKGVMRRTGGARSGQRVAFLGFGSMVHPALGAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     +VAD RF KPLD  L++ LA+ H  L+TVEEGS+ GG GS V++ LA+ G
Sbjct: 528 QALDA-----SVADMRFVKPLDVELVKRLAEEHNYLVTVEEGSVMGGAGSAVLEALAEAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +    +    L LPDR+IDHG PA  L+Q GL  + I  +V    G
Sbjct: 583 I---DIPVLVLGLPDRFIDHGDPALLLSQCGLDAAGIERSVRERFG 625


>gi|404401537|ref|ZP_10993121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fuscovaginae
           UPB0736]
          Length = 632

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 320/643 (49%), Positives = 427/643 (66%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRADTPAGLRRLGEAELETLADELRQELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++MHT+RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMHTLRQKDGLAAFPRRTESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSAVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLSTG 472

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLA 603
              +  P+  RYPRG+G      P  K + P+E+GKG +  +G +VALL +G  +     
Sbjct: 473 HRYNG-PAAVRYPRGSGPNA---PIEKNLEPIEIGKGVVRRQGSKVALLVFGVQL----- 523

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
           A AL+ +  L  TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G+ V +FLAQ
Sbjct: 524 AEALVVAEKLDATVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGAAVSEFLAQ 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           D LL   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 584 DNLLKPILH---LGLPDAYVEHAKPAQMLAECGLDVAGIEASV 623


>gi|114331489|ref|YP_747711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
 gi|122313705|sp|Q0AFY6.1|DXS_NITEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114308503|gb|ABI59746.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
          Length = 614

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 317/632 (50%), Positives = 421/632 (66%), Gaps = 27/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD I  P  ++NL   +L QLADELR+ +I +V+KTGGHL S+LG IELT+ALHY+F+
Sbjct: 3   PLLDRIEIPAQLRNLKRSQLPQLADELRSFLIESVAKTGGHLSSNLGTIELTIALHYIFD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTY HKILTGRR  M  +R   G++GF +R ESEYD FGT HSSTSIS
Sbjct: 63  TPFDRLVWDVGHQTYAHKILTGRRTGMAHLRMQGGIAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV   +   K + +A+IGDGAM+AG A+EA+NNAG +D+D++VILNDN  +S+  
Sbjct: 123 AALGMAVAARINKIKQHAIAIIGDGAMSAGMAFEALNNAGVMDADLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S R     R   + +   +  P+ ELA + +E+ +GM+ 
Sbjct: 181 -------PPVGALNHYLAKLMSGRFYATARRAGERMLGVV-PPVLELAKRAEEHVKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH++D L+  L  +K  +  GP  +H+VT KG+GY  AE+ 
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDLDILLTTLNNIK--QLDGPQFLHIVTRKGKGYKPAEED 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KF+P  G   K S R  +YT  F + L   A  D  ++ I  AM  G+GL  
Sbjct: 289 PVLYHGVGKFEPGKGVIPKPSTRP-AYTQIFGDWLCDMAAKDSRLIGITPAMREGSGLIR 347

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P R FDVGIAEQHAVTFAAG ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 348 FSKEYPDRYFDVGIAEQHAVTFAAGAACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 407

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADGPTH GSFD++++ C+PN+ VM P+DE E   M+ TA  + D P+  
Sbjct: 408 VFAIDRAGLVGADGPTHAGSFDLSYLRCIPNITVMMPADENECRQMLYTAFQL-DTPTAV 466

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV++    + +PL  GKG I  +G R+ALL +G+ +  CL A   L++    
Sbjct: 467 RYPRGTGPGVQIKQEMQIVPL--GKGEIRRQGTRIALLAFGSMLSPCLEAGDELDA---- 520

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD  L+ +LA  HE+L+TVEE +I GG GS V++ LA  G+    ++  
Sbjct: 521 -TVVNMRFVKPLDQELVMTLAAEHELLVTVEENTIMGGAGSAVLECLASQGV---NIRLL 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L L D ++D G PA  L+  GL  + I  +V
Sbjct: 577 QLGLSDNFLDQGDPAQMLSDCGLDKTGIIKSV 608


>gi|409407600|ref|ZP_11256051.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
 gi|386433351|gb|EIJ46177.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
          Length = 621

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 330/645 (51%), Positives = 436/645 (67%), Gaps = 30/645 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TIN P  ++ LS  +LK LA+ELR  ++ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 2   LLTTINDPADLRRLSRPQLKPLAEELRGFLLDSVSKTGGHLSSNLGTVELTIALHYVFNT 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRRD+M T+RQ +G+SGF +R ES+YD FGT HSSTSISA
Sbjct: 62  PEDRIVWDVGHQTYPHKILTGRRDRMDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+    +G   + +AVIGDGAMTAG A+EA+NNAG + D +++VILNDN  +S+  
Sbjct: 122 ALGMALAARTQGSDRHAIAVIGDGAMTAGMAFEALNNAGVHEDINLLVILNDN-DMSIS- 179

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +   + R+V K V   + GP+ ELA +++E+A+GM+ 
Sbjct: 180 -------PPVGALNRYLARLMSGKFYAKARDVGKSV---LPGPVLELAKRLEEHAKGMV- 228

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D L+  L+ +K  K  GP  +HVVT+KG+GY  AE  
Sbjct: 229 -VPATMFEEFGFNYIGPIDGHDLDSLIPTLQNLKQLK--GPQFLHVVTKKGQGYKLAEAD 285

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+P+ G +  S+    +YT  F + L   A  D+ +V I  AM  G+G+  
Sbjct: 286 PVLYHGPGKFNPSEGIK-PSAGGKLTYTQVFGQWLCDMAAADEKLVGITPAMREGSGMVG 344

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 345 FEKTFPKRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDV 404

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNMVVMA SDE E   M++TA      P+  
Sbjct: 405 TFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRKMLSTAYQYPG-PAAV 463

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G+G  +    + +PL  G+G I  +G  VA+L +G+     L A AL   + L 
Sbjct: 464 RYPRGAGVGAAVEKTLETLPL--GRGEIRRQGRDVAILAFGS-----LLAPALSAGDKLN 516

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD  L++ LA SH+ L+TVEEG I GG G+ V + LA  G+    +   
Sbjct: 517 ATVANMRFIKPLDVELVKQLAASHDALVTVEEGCIMGGAGAAVSEALAAAGINKPVLH-- 574

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
            L LPDR+IDHG  A  LAQ GL    IA ++    G+ +  L +
Sbjct: 575 -LGLPDRFIDHGDAAQLLAQCGLDADGIAQSIVQRFGKDQTRLVV 618


>gi|345869245|ref|ZP_08821203.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
           AZ1]
 gi|343923168|gb|EGV33860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
           AZ1]
          Length = 649

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 334/649 (51%), Positives = 431/649 (66%), Gaps = 32/649 (4%)

Query: 60  SLSERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSS 119
           +LS+ G    +RP   LLD+I+ P+ ++ LS  +L ++A ELR+ +I  VS+TGGHL + 
Sbjct: 5   TLSDPGVASHRRP---LLDSIDSPLDLRALSESQLPEVASELRSFLIECVSQTGGHLAAG 61

Query: 120 LGVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSES 179
           LGV+ELT+ LHYVF+ P DRI+WDVGHQ YPHKILTGRRD+M T+RQ DG+SGF KR ES
Sbjct: 62  LGVVELTLGLHYVFDTPTDRIVWDVGHQAYPHKILTGRRDRMCTLRQKDGVSGFPKRCES 121

Query: 180 EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
           EYD FG GHSSTSISA LGMA+    KG +  V+AVIGDGA++AG A+EA+N+AG +D D
Sbjct: 122 EYDAFGVGHSSTSISAALGMALAAKQKGERRTVIAVIGDGALSAGMAFEALNHAGSMDID 181

Query: 240 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-M 298
           ++VILNDN ++S+         PPVGA+S+ L+RL S +    +RE +K  T   G P +
Sbjct: 182 LVVILNDN-EMSIS--------PPVGAISNHLARLLSGKLYTSVREGSK--TALAGMPQL 230

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
             L  + +E+ +GM+    STLFEELG  YIGP+DGH++  +   L  +K     G  L+
Sbjct: 231 RHLVGRWEEHVKGML--MPSTLFEELGFNYIGPIDGHDLGSVTRTLRNIKGMP--GQRLL 286

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HVVT+KGRGY  AE     YHGV  FD  TG+  K  +   +YT  F   L   A+ D  
Sbjct: 287 HVVTQKGRGYEPAEGQPTTYHGVTPFDRRTGELRKGKSNGPTYTQIFGGWLCDAADEDPR 346

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +V I  AM  G+GL  F +RFP R FDVGIAEQHAVT AAG+ACEGLKP  AIYSSF+QR
Sbjct: 347 LVGITPAMCEGSGLTAFSKRFPDRYFDVGIAEQHAVTLAAGMACEGLKPVVAIYSSFLQR 406

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQ++HDV LQ L V FA+DR GLVGADG TH GSFD++F   +PNMV+MAPS+E E  
Sbjct: 407 AYDQLIHDVALQNLDVTFAVDRGGLVGADGATHAGSFDLSFTRPIPNMVIMAPSNENECR 466

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTA 597
            M+ TA   +  P+  RYPRG G G+ + P    +P  +G+G I+ +G   VALL +G+ 
Sbjct: 467 QMLKTAFEYEG-PAMVRYPRGGGPGIAIDPKAPALP--IGRGEIVRQGAGSVALLAFGSM 523

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHV 656
           V   L A+  L +     TVA+ RF KPLD  LI+ LA +HE+L+TVEE +I GG GS V
Sbjct: 524 VTPALKAAETLNA-----TVANMRFVKPLDLDLIQKLADTHELLVTVEENTIAGGAGSAV 578

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            + LA  GL   T +   L LPD YIDH    +QLA  GL  + I A+V
Sbjct: 579 AEALAGLGL---TPRCIQLGLPDSYIDHAQHGEQLAACGLDAAGILASV 624


>gi|344337405|ref|ZP_08768339.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocapsa marina 5811]
 gi|343802358|gb|EGV20298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocapsa marina 5811]
          Length = 658

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 329/654 (50%), Positives = 433/654 (66%), Gaps = 31/654 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL +IN P  ++ L    L  + +ELR  ++  VS+TGGHL + LGV+ELTV LHYVF+
Sbjct: 17  PLLASINSPADLRALPEHLLPSVVNELRGFLVDTVSQTGGHLAAGLGVVELTVGLHYVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ YPHKILTGRRD+M ++RQ DGLSGF KR ES+YDCFG GHSSTSIS
Sbjct: 77  TPEDRLVWDVGHQAYPHKILTGRRDRMLSLRQKDGLSGFPKRCESDYDCFGVGHSSTSIS 136

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G + + VAVIGDGA++AG A+EA+N+AG +D D++VILNDN ++S+  
Sbjct: 137 AALGMALAAKQQGEQRDAVAVIGDGALSAGMAFEALNHAGSMDIDLVVILNDN-EMSIS- 194

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                  PPVGA+++ L+RL S +    +RE +K  T   G P +  L  + +E+ +GM+
Sbjct: 195 -------PPVGAITNHLARLLSGKIYTTMREGSK--TALRGMPQLRHLVGRWEEHMKGML 245

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               STLFEELG  YIGP+DGH+V  ++  L  +K  +  G   +HVVT+KG GY  AE 
Sbjct: 246 --MPSTLFEELGFNYIGPIDGHDVHSVIKTLRNIKEMR--GQRFLHVVTQKGHGYEPAEG 301

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV  FD  TG+  K +++  +YT  F   L   AE D  +V I  AM  G+GL 
Sbjct: 302 QPVTYHGVTPFDRRTGELRKGASKGPTYTQIFGSWLCDTAEADPRLVGITPAMCEGSGLT 361

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
           +F +RFP R FDVGIAEQHAVT AAG+ACEG+KP  AIYSSF+QRAYDQ++HDV LQ L 
Sbjct: 362 VFSKRFPERFFDVGIAEQHAVTLAAGMACEGVKPVVAIYSSFLQRAYDQLIHDVCLQGLD 421

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR GLVGADG TH GSFD++F   LP +V+MAP+ E E   M+ TA      P+ 
Sbjct: 422 VTFAVDRGGLVGADGATHAGSFDLSFGRPLPKLVIMAPAHENECRAMLRTAYEYPG-PAM 480

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRGNG GV + P    +P  +G+G I+ +G RVALL +G+ V     A+  L++   
Sbjct: 481 VRYPRGNGPGVAIDPETPALP--IGRGEIVRQGSRVALLAFGSMVTPASKAAEPLDA--- 535

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TVA+ RF KPLD  LIR+LA+ H++L+TVEE S+ GG GS V ++LA +G+    +  
Sbjct: 536 --TVANMRFVKPLDGPLIRALAEGHDLLVTVEENSVAGGAGSGVAEWLAAEGI---DIPC 590

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG---QTREALEIMSFKS 723
             L LPDRYIDH   A QLA  GL    I A+V +  G     R+ LE+ +  S
Sbjct: 591 VHLGLPDRYIDHAEHAQQLAACGLDAEGIRASVRDAYGLRFPDRDLLEVANAGS 644


>gi|349575615|ref|ZP_08887526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
 gi|348012883|gb|EGY51819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
          Length = 627

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/632 (50%), Positives = 422/632 (66%), Gaps = 24/632 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI+ P  ++ L   +L QLADELR  ++ +V +TGGH  S+LG +ELTVALHYV+
Sbjct: 4   TPLLDTIDSPQDLRRLREEQLPQLADELRTFLLESVGRTGGHFASNLGAVELTVALHYVY 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D ++WDVGHQ+YPHKILTGR+ +MHT+RQ  GL+GF KR+ESEYD FG GHSSTSI
Sbjct: 64  DTPHDHLVWDVGHQSYPHKILTGRKQRMHTIRQCGGLAGFPKRAESEYDDFGVGHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
            A LGMAV   L G     VAVIGDGAMTAGQA+EA+NNAG +D+D++VILNDN+    P
Sbjct: 124 GAALGMAVADRLSGSPRRSVAVIGDGAMTAGQAFEALNNAGAMDTDLLVILNDNEMSISP 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM- 312
                G +P    L+S + R      LR ++  ++ V  ++ G + ++A +V+   R M 
Sbjct: 184 NV---GALPKY--LASEVVR-DMRGALRSIKHKSEKVLDKLPGAL-DIAQRVENRIRSMV 236

Query: 313 --ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
             + G  ++LF   GL Y GPVDGH+V  LVA+L E+K  K  GP L+HV+T KG+GYP 
Sbjct: 237 DEVQGGQNSLFNNFGLDYTGPVDGHDVRKLVAVLREMKQRK--GPQLLHVLTRKGQGYPL 294

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H V KF+PA G    ++    SYT  F + L  +A  D  +VAI  AM  G+
Sbjct: 295 AENDPVGFHAVGKFNPAEGPSKPAAPAKPSYTQIFGDWLHDQATADPKLVAITPAMREGS 354

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F ++FP R FDVGIAEQHAVTFAAGLACEG+KP  AIYS+F+QRAYDQ++HDV LQ
Sbjct: 355 GLVAFEQQFPERYFDVGIAEQHAVTFAAGLACEGVKPVVAIYSTFLQRAYDQLIHDVALQ 414

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAG+VGADGPTH G++D++++ C+PNMVV APSDE E   +++T  A+  +
Sbjct: 415 NLPVLFAIDRAGIVGADGPTHAGAYDLSYLRCIPNMVVAAPSDENECRLLLSTCYAL-KQ 473

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G G  +  G   +PL  GKG +   G   A+L +G+ VQ  L A     +
Sbjct: 474 PAAVRYPRGSGCGAAVTSGLDTVPL--GKGIVRRRGHGTAVLAFGSMVQPALTA-----A 526

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
             L LTVAD RF KP+D ALI  LA+ HE L+ +EE ++ GG GS V++ LAQ GL   T
Sbjct: 527 ETLNLTVADMRFVKPIDEALIIELAQQHERLVCIEENAVQGGAGSAVLEVLAQHGLCRPT 586

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
           +    L +PD   +HG PA  L   GL+   I
Sbjct: 587 LL---LGIPDVVTEHGDPAVLLDDMGLSAGKI 615


>gi|300313125|ref|YP_003777217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum seropedicae
           SmR1]
 gi|300075910|gb|ADJ65309.1| 1-deoxy-D-xylulose 5-phosphate synthase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 621

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 329/645 (51%), Positives = 438/645 (67%), Gaps = 30/645 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  ++ LS  +LK LA+ELR  ++ +VSKTGGHL S+LG +ELT+ALHYVFN 
Sbjct: 2   LLNTINDPADLRRLSRHQLKPLAEELRGFLLDSVSKTGGHLSSNLGTVELTIALHYVFNT 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQTYPHKILTGRR++M T+RQ +G+SGF +R ES+YD FGT HSSTSISA
Sbjct: 62  PEDRVVWDVGHQTYPHKILTGRRERMDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+    +G   + +AVIGDGAMTAG A+EA+NNAG + D  ++VILNDN  +S+  
Sbjct: 122 ALGMALAARTQGSDRHAIAVIGDGAMTAGMAFEALNNAGVHEDVKLLVILNDN-DMSIS- 179

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     R+V K V   + GP+ ELA +++E+A+GM+ 
Sbjct: 180 -------PPVGALNRYLARLMSGKFYARARDVGKSV---LPGPVLELAKRLEEHAKGMV- 228

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D LV  L+ +K+ K  GP  +HVVT+KG+GY  AE  
Sbjct: 229 -VPATMFEEFGFNYIGPIDGHDLDSLVPTLQNLKHLK--GPQFLHVVTKKGQGYKLAEAD 285

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+P+ G +  S+    +YT  F + L   A  D  +V I  AM  G+G+  
Sbjct: 286 PVLYHGPGKFNPSEGIK-PSAGGKLTYTKVFGDWLCDMAAADDKLVGITPAMREGSGMVD 344

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F ++FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 345 FEKKFPNRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDV 404

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNMVVMA SDE E   M++TA      P+  
Sbjct: 405 TFALDRAGLVGADGATHAGNYDLAFLRCIPNMVVMAASDENECRKMLSTAYQYPG-PASV 463

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG GIG  +    + +PL  G+G I  +G+ VA+L +G+     L A +L   + L 
Sbjct: 464 RYPRGAGIGAAVDQTLETLPL--GRGEIRRQGKNVAILAFGS-----LLAPSLGAGDKLN 516

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD  L++ LA SH+ L+TVEEG I GG G+ V + LA  G+    +   
Sbjct: 517 ATVANMRFIKPLDVELVKQLAASHDALVTVEEGCIMGGAGAAVSEALAAAGINKPILH-- 574

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
            L LPDR+IDHG  A  LAQ GL  + IA ++    G+ +  L +
Sbjct: 575 -LGLPDRFIDHGDAAQLLAQCGLDANGIADSIAQRFGKDQPKLVV 618


>gi|257095635|ref|YP_003169276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048159|gb|ACV37347.1| deoxyxylulose-5-phosphate synthase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 629

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/632 (50%), Positives = 418/632 (66%), Gaps = 26/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTI+ P  ++ L  R+L QLADELRA ++ +VS+TGGHL S+LG +ELTVALH+VF+
Sbjct: 5   PLLDTISDPAQVRALDRRQLPQLADELRAFLVDSVSRTGGHLSSNLGTVELTVALHHVFD 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTY HK+LTGRR  M  +R   G+SGF KRSES YD FG GHSSTSIS
Sbjct: 65  TPHDRLVWDVGHQTYAHKVLTGRRAGMAKLRMHGGVSGFPKRSESRYDTFGVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+   +KG    VVA+IGDGAM+AGQA+EA+NNAG  D+DM+VILNDN  +S+  
Sbjct: 125 AALGMALAAKIKGETRKVVAIIGDGAMSAGQAFEALNNAGVADADMLVILNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S       R+  + +       + E A + +E+ +GM+ 
Sbjct: 183 -------PPVGALNRYLARLFSGSTFNAARKAGEKIL-DFSPSLREFAKRAEEHVKGML- 233

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEELGL YIGP+DGH+++ LV  L+ +K+ K  GP  +HV+T+KG+GY  AE  
Sbjct: 234 -TPGTLFEELGLNYIGPIDGHDLESLVPTLQNLKHLK--GPQFLHVITKKGQGYKLAEVD 290

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV+KF P  G     +    +YT  F + L   A  D  +V I  AM  G+GL  
Sbjct: 291 PILYHGVSKFKPEVGIAGGPTGAKPTYTQVFGDWLCDMAAADPRLVGITPAMREGSGLLR 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  R+P R +DVGIAEQHAVTFAAGLACEGL+P  AIYS+F+QR YDQ+VHDV LQ LPV
Sbjct: 351 FSERYPQRYYDVGIAEQHAVTFAAGLACEGLRPVLAIYSTFLQRGYDQLVHDVALQNLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DR GLVGADGPTH G+FD++F+ C+PN+VVM P+DE E   M+ TA  +D  PS  
Sbjct: 411 VFALDRGGLVGADGPTHHGAFDISFLTCIPNLVVMTPTDEDECRKMLTTAYRLDG-PSAV 469

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV +     G+P  VGKG I   G  VALL +G+ +   LAA   +++    
Sbjct: 470 RYPRGTGPGVAIEKALVGLP--VGKGEIRRRGRDVALLAFGSMLTPALAAGEDIDA---- 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWR 673
            +VA+ RF KP+D  LI +LA  H +L++VEE + IGG GS V + L +   +    +  
Sbjct: 524 -SVANMRFVKPIDRELILALAAEHSLLVSVEENAVIGGAGSEVERVLEE---IASPTRLL 579

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L +PD +I+HG  A  LA+ GL    I A V
Sbjct: 580 RLGIPDHFIEHGDQALLLAEVGLDRDGIVAAV 611


>gi|260220842|emb|CBA28812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 631

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 323/638 (50%), Positives = 420/638 (65%), Gaps = 26/638 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLL TI+ P  ++ L   +L+ LADELR  ++ +V++TGGHL S+LG +ELTVALHYVF
Sbjct: 9   TPLLATIDDPAALRQLQRPQLRTLADELRNYLLHSVARTGGHLSSNLGTVELTVALHYVF 68

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DRI+WDVGHQTYPHKILTGRRD+M ++RQ  GLSGF +R ESEYD FGT HSSTSI
Sbjct: 69  NTPDDRIVWDVGHQTYPHKILTGRRDRMDSLRQFGGLSGFPRRDESEYDTFGTAHSSTSI 128

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+   +KG     VAVIGDGAMTAG A+EA+NNAG  D  ++VILNDN  +S+ 
Sbjct: 129 SAALGMALASRIKGEDRYSVAVIGDGAMTAGMAFEALNNAGVEDCRLLVILNDN-DMSIS 187

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L++L S +     + V K V K    P+ ELA +++E A+GM+
Sbjct: 188 --------PPVGALNRYLAQLMSGQFYAAAKSVGKSVLKG-APPLFELAKRLEEQAKGMV 238

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +TLFE+ G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE 
Sbjct: 239 --VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKQLK--GPQFLHVVTKKGQGYKLAEA 294

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG  KFDPA G    ++    ++T  F + L   A  D+ +V I  AM  G+G+ 
Sbjct: 295 DPVAYHGPGKFDPAVGLVKSTTPAKTTFTQVFGQWLCDMAAADERLVGITPAMREGSGMV 354

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R FDVGIAEQHAVTFA GLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 355 EFEKRFPQRYFDVGIAEQHAVTFAGGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLP 414

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM V  P+DE E   +++TA A  + P  
Sbjct: 415 VVFALDRAGLVGADGATHAGAYDIPFLRCIPNMSVACPADENECRQLLSTAYA-QNHPVA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+G GV +    +G+P   GKG I  +G  +A+L +GT     L   AL+ +  L
Sbjct: 474 VRYPRGSGAGVAVSSSLEGLPF--GKGEIRKQGGNIAILAFGT-----LLYPALVAAEAL 526

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKW 672
             TV + R+ KPLD  L+  +A +H  L+TVEEG ++GG GS V++ L    L   ++  
Sbjct: 527 GATVVNMRWAKPLDTELLLQVAATHSALVTVEEGATMGGAGSAVLEALQAAKL---SIPV 583

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             L L D +I+HG PA  L   GL  + I A+V    G
Sbjct: 584 LQLGLADEFIEHGDPAYLLQMQGLDAAGIQASVRQRFG 621


>gi|325983214|ref|YP_004295616.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212]
 gi|325532733|gb|ADZ27454.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212]
          Length = 614

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 317/636 (49%), Positives = 421/636 (66%), Gaps = 27/636 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLDTIN P  ++ L  ++L Q A ELR+ +I +V+KTGGHL S+LG +ELT+ALHYVFN
Sbjct: 3   PLLDTINLPFQLRELDQKKLPQFAKELRSFLIDSVAKTGGHLSSNLGTVELTIALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQTY HKILTGRR+ M+ +R  DGL+GF +R ESEYD FGT HSSTSIS
Sbjct: 63  TPHDQLVWDVGHQTYAHKILTGRRNGMNKLRMQDGLAGFPRRDESEYDAFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV   L       +A+IGDGAM+AG A+EA+NNAG +D++++VILNDN  +S+  
Sbjct: 123 AALGMAVAAQLNRTDRRAIAIIGDGAMSAGMAFEALNNAGVMDANLLVILNDN-DMSISR 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                   PVGAL++ L++L S R     R   + V   +   + ELA + +E+ +GM+ 
Sbjct: 182 --------PVGALNNYLAKLMSGRFYATARRAGEKVLGVVPTVL-ELAKRAEEHVKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH++D LV  L  +K  +  GP  +HVVT KG GY  AE+ 
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDLDVLVTTLGNIKQLE--GPQFLHVVTRKGAGYKVAEED 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G   KS+ +  +YT  F + L   A  D  ++ +  AM  G+GL  
Sbjct: 289 PILYHGVGKFDPKKGIVTKSNGKP-TYTQIFGDWLCDMAAQDSRLIGVTPAMREGSGLVR 347

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F   +P R FDVGIAEQHAVTFAAG AC+GLKP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 348 FSEEYPERYFDVGIAEQHAVTFAAGAACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 407

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADGPTH GSFD+T++ C+PNM VMAP+DE E   M+ TA  + D P+  
Sbjct: 408 VFAIDRAGLVGADGPTHAGSFDLTYLRCIPNMTVMAPADENECRQMLYTAFKL-DTPTAV 466

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G+++    + +P  VG+G I  +G+++ALL +G+ +  CLAA      + L 
Sbjct: 467 RYPRGTGPGIQVQKEMQALP--VGRGEIRRQGKKIALLAFGSMLAPCLAA-----GDELN 519

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD  L+ SL   H +L+TVEE ++ GG GS V++ L    +  G ++  
Sbjct: 520 ATVVNMRFIKPLDDDLLASLTADHNLLVTVEENTVMGGAGSAVIESLNSQRIQVGVLQ-- 577

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            L LPD +I+ G  A  LA  GL  S I  +V  +L
Sbjct: 578 -LGLPDIFIEQGDHAQMLANCGLDSSGIIKSVRAVL 612


>gi|222110170|ref|YP_002552434.1| 1-deoxy-d-xylulose-5-phosphate synthase [Acidovorax ebreus TPSY]
 gi|254782071|sp|B9MEU8.1|DXS_DIAST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221729614|gb|ACM32434.1| deoxyxylulose-5-phosphate synthase [Acidovorax ebreus TPSY]
          Length = 629

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 322/640 (50%), Positives = 428/640 (66%), Gaps = 32/640 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ +N P  ++ L   ELK LA ELRA V+ +VSKTGGHL S+LG +ELTVALH VF+
Sbjct: 7   PLLERVNDPADLRRLPRAELKALATELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M ++RQ  GLSGF +R+ESEYD FGT HSSTSIS
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPSLRQLGGLSGFPQRAESEYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G +   VA+IGDGAMTAG A+EA+NNAG  D++++VILNDN  +S+  
Sbjct: 127 AALGMALAAKQRGDERRCVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +   + R+V K V K    P+ ELA ++++ A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGQFYAKARDVGKSVLKN-APPLLELAKRLEQQAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE ++  K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIRGLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP  G    ++   Q++T  F + L   AE D+ +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMAEKDERLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 353 FHQRFPERYYDVGIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++ TA    D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFVRCIPNMSMACPADERECRQLLTTAYE-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G+GV   P  +G+P   GKG +  +G R+A+L +GT +   L A+  L++    
Sbjct: 472 RYPRGAGVGVAPLPDLEGLPF--GKGEVRRKGRRMAILAFGTLLYPALQAAEALDA---- 525

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + R+ KPLD  L+  +A  H+ L+TVEEG I GG GS V + LA  G+       R
Sbjct: 526 -TVVNMRWAKPLDTQLLLQVAAEHDALVTVEEGCIMGGAGSAVAEALAAAGV------QR 578

Query: 674 PLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           PL+   LPD +I+HG PA  LA  GL  + +  ++    G
Sbjct: 579 PLLQLGLPDAFIEHGDPAKLLALQGLDAAGMQRSITERFG 618


>gi|395005696|ref|ZP_10389565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
 gi|394316252|gb|EJE52982.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
          Length = 627

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 317/640 (49%), Positives = 430/640 (67%), Gaps = 34/640 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL T+N P  ++ +   +LK LA ELRA V+ +VS+TGGHL S+LG +ELTVALH+VFN
Sbjct: 7   PLLQTVNDPADLRAMPRADLKALATELRAFVLESVSQTGGHLSSNLGTVELTVALHHVFN 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M+T+RQ  G+SGF +R+ES YD FGT HSSTSIS
Sbjct: 67  TPEDRLVWDVGHQTYPHKILTGRRDRMNTLRQMGGISGFPQRAESPYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+   +KG   + VA+IGDGAMTAG A+EA+NN G  D++++V+LNDN  +S+  
Sbjct: 127 AALGMALAAKVKGENRHAVAIIGDGAMTAGMAFEALNNGGVADANLLVVLNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +     + V K V + +  P+ ELA + ++ A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGQFYAAAKNVGKTVLRPV-PPLLELAKRFEQQAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDPA G    +++  Q++T  F + L      D+ +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPAVGLVKGTASPKQTFTQVFGQWLCDMGAHDQRLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 353 FEKRFPERYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   +++TA    D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSTAFE-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE--------GERVALLGYGTAVQSCLAASA 606
           RYPRG+G GV    G +G+P   GKG I  E        G R+A+L +GT +   L A  
Sbjct: 472 RYPRGSGAGVAPLAGLEGLPF--GKGEIRRERKAAAGEAGPRIAILAFGTLLYPALEAGE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGL 665
            L++     TVA+ R+ KP+D  L+R +A+ H+VL+TVEEG ++GG GS V + L   G+
Sbjct: 530 ALDA-----TVANMRWAKPVDVELLRDVAERHDVLVTVEEGATMGGAGSAVTEALNAAGI 584

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +   ++   L LPD +I+HG PA  L+  GL  + I   V
Sbjct: 585 VRPVLQ---LGLPDAFIEHGDPAKLLSLQGLDAAGIERAV 621


>gi|124267816|ref|YP_001021820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum
           PM1]
 gi|171769840|sp|A2SJ46.1|DXS_METPP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|124260591|gb|ABM95585.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum
           PM1]
          Length = 631

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 325/645 (50%), Positives = 428/645 (66%), Gaps = 31/645 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TI+ P  ++ LS  ELKQLA ELR  V+ +VS+TGGHL S+LG +ELT+ALH+VFN
Sbjct: 5   PLLSTIDQPADLRGLSRAELKQLAQELRDHVLTSVSQTGGHLSSNLGTVELTIALHHVFN 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M  +RQ  G+SGF +R ESEYD FGT HSSTSIS
Sbjct: 65  TPQDRLVWDVGHQTYPHKILTGRRDRMAGLRQLGGISGFPRRDESEYDTFGTAHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+   +KG     VA+IGDGAMTAG A+EA+NNAG   ++M+V+LNDN  +S+  
Sbjct: 125 AALGMALAAKIKGEDRRSVAIIGDGAMTAGMAFEALNNAGVSGANMLVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+   +RL S R     R+ AK V K    P+ ELA + +E+A+GMI 
Sbjct: 183 -------PPVGALNRYFARLMSGRFYSAARQGAKSVLKN-APPLLELARRFEEHAKGMI- 233

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              ST+FEE G  Y+GP+DGH++D L+  LE +++ K  GP  +HVVT+KG GY  AE  
Sbjct: 234 -VPSTIFEEFGFTYVGPIDGHDLDSLIPTLENLRDRK--GPQFLHVVTKKGYGYKLAEAD 290

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G + K++    S+T  F + L   A  D  +V I  AM  G+G+  
Sbjct: 291 PVAYHGPGKFNPAEGLK-KAAPGKPSFTQVFGQWLCDMAAKDTRLVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QR YDQ++HDV +Q LPV
Sbjct: 350 FEQRFPDRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLIHDVAIQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G++D+ ++ C+P++ ++AP+DE E    + TAA     P   
Sbjct: 410 VFALDRAGIVGADGATHAGAYDIAYVRCVPHLSLIAPADENECRQAL-TAAFEQQHPVAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRI----LIEGERVALLGYGTAVQSCLAASALLES 610
           RYPRG G+GV +      +P   G+G +       G R+A+L +GT +   LAA+  L++
Sbjct: 469 RYPRGAGVGVAVQSELTALPW--GRGELRREARGGGRRIAILAFGTLLYPALAAAEKLDA 526

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TVA+ RF KPLD  L+ SLA+SHE L+TVEEG + GG GS V++ L   G+    
Sbjct: 527 -----TVANMRFIKPLDTELVLSLARSHEALVTVEEGCLQGGAGSAVLEALQAAGV---N 578

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           +    L LPD +++HG PA  LAQ GL  + I  ++    G   E
Sbjct: 579 LPVLTLGLPDEFVEHGDPAKLLAQLGLDAAGIEQSILKRFGAKLE 623


>gi|33597052|ref|NP_884695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis
           12822]
 gi|33600897|ref|NP_888457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
           RB50]
 gi|410420905|ref|YP_006901354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
           MO149]
 gi|410472461|ref|YP_006895742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis
           Bpp5]
 gi|412338916|ref|YP_006967671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
           253]
 gi|427815399|ref|ZP_18982463.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           1289]
 gi|427819665|ref|ZP_18986728.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           D445]
 gi|41016954|sp|Q7W7Q0.1|DXS_BORPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|41016955|sp|Q7WL37.1|DXS_BORBR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33566503|emb|CAE37759.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis]
 gi|33568497|emb|CAE32409.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           RB50]
 gi|408442571|emb|CCJ49122.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis
           Bpp5]
 gi|408448200|emb|CCJ59881.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           MO149]
 gi|408768750|emb|CCJ53520.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           253]
 gi|410566399|emb|CCN23960.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           1289]
 gi|410570665|emb|CCN18858.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           D445]
          Length = 620

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 327/630 (51%), Positives = 424/630 (67%), Gaps = 27/630 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  ++ L  RELK+LADELR  V+ +VS+TGGHL S+LG +EL++ALHYVF
Sbjct: 3   TELLDRILSPADLRQLDRRELKRLADELRGFVLESVSRTGGHLSSNLGTVELSLALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR+ M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRREGMAHLRQQGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   + +++V+LNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVVLNDND-MSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S +     + V + V + +  P+ ELA +++E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGQFYAAAKNVGRAVLQHV-PPVLELARRLEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ ++     G   +HVVT KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLR--ALPGLQFLHVVTRKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F + L   AE D+ +V I  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQAKAPARKTFTQVFGQWLCDMAERDERLVGITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAGLACEG KP  AIYS+F+QR YDQ+VHDV LQ L
Sbjct: 349 VEFEQRFPQRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ F+ C+PNMVV APSDE+E   +++T       P+
Sbjct: 409 DVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLSTCYE-HPGPA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G  +  G   +PL  GKG +  EG R+A+LG+GT VQ+ L A+  +++  
Sbjct: 468 SVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAAGQIDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KPLD  L+  LA  H+ L+TVEE +I GG GS V++ LA+ G+   T+ 
Sbjct: 524 ---TVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGV---TLP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
              L LPD +IDHG  A  LA  GL  + I
Sbjct: 578 VLQLGLPDAFIDHGDQAALLAGLGLDAAGI 607


>gi|427824862|ref|ZP_18991924.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           Bbr77]
 gi|410590127|emb|CCN05206.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           Bbr77]
          Length = 620

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 327/630 (51%), Positives = 424/630 (67%), Gaps = 27/630 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  ++ L  RELK+LADELR  V+ +VS+TGGHL S+LG +EL++ALHYVF
Sbjct: 3   TELLDRILSPADLRQLDRRELKRLADELRGFVLESVSRTGGHLSSNLGTVELSLALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR+ M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRREGMAHLRQQGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   + +++V+LNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVVLNDND-MSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S +     + V + V + +  P+ ELA +++E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGQFYAAAKNVGRAVLQHV-PPVLELARRLEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ ++     G   +HVVT KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLR--ALPGLQFLHVVTRKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F + L   AE D+ +V I  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQAKAPARKTFTQVFGQWLCDMAERDERLVGITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAGLACEG KP  AIYS+F+QR YDQ+VHDV LQ L
Sbjct: 349 VEFEQRFPQRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ F+ C+PNMVV APSDE+E   +++T       P+
Sbjct: 409 DVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLSTCYE-HPGPA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G  +  G   +PL  GKG +  EG R+A+LG+GT VQ+ L A+  +++  
Sbjct: 468 SVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAADQIDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KPLD  L+  LA  H+ L+TVEE +I GG GS V++ LA+ G+   T+ 
Sbjct: 524 ---TVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGV---TLP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
              L LPD +IDHG  A  LA  GL  + I
Sbjct: 578 VLQLGLPDAFIDHGDQAALLAGLGLDAAGI 607


>gi|241765610|ref|ZP_04763566.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN]
 gi|241364578|gb|EER59638.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN]
          Length = 630

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 327/630 (51%), Positives = 425/630 (67%), Gaps = 33/630 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL T+N P  +++LS  +LKQLA ELRA VI +VS+TGGHL S+LG +ELTVALH+VFN
Sbjct: 7   PLLQTVNDPADLRSLSRSDLKQLATELRAFVIESVSQTGGHLSSNLGTVELTVALHHVFN 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRRD+M T+RQ  G+SGF +R+ES YD FGT HSSTSIS
Sbjct: 67  TPDDRLVWDVGHQTYPHKILTGRRDRMSTLRQLGGISGFPQRTESAYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG + +VVA+IGDGAMTAG A+EA+NNAG  D++++VILNDN  +S+  
Sbjct: 127 AALGMALAAKRKGEERHVVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +     + V K V K    P+ ELA ++++ A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGQFYAAAKNVGKSVLKN-APPLLELAKRLEQQAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKDLK--GPQFLHVVTKKGQGYKLAEVD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDPA G    ++A  Q++T  F + L   AE D  +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPAVGLVKSTAAPKQTFTQVFGQWLCDMAEQDDRLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 353 FHKRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRGYDQMIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   +++TA A  D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSTAFA-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-------GERVALLGYGTAVQSCLAASAL 607
           RYPRG+G GV    G   +P   GKG I  E       G R+A+L +GT     L   AL
Sbjct: 472 RYPRGSGAGVAPLRGLDSLPF--GKGEIRRERKGDGKAGPRIAILAFGT-----LLYPAL 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
             +  L  TV + R+ KPLD  L+  +A SH  L+T+EEG+I GG GS V++ LA   + 
Sbjct: 525 EAAEALDATVVNMRWAKPLDVELLLEVAASHHALVTLEEGAIMGGAGSAVMEALAAAQV- 583

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
             T+    L LPD +I+HG PA  LA  GL
Sbjct: 584 --TMPVLQLGLPDVFIEHGDPARLLALQGL 611


>gi|121604407|ref|YP_981736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas
           naphthalenivorans CJ2]
 gi|166198636|sp|A1VMD7.1|DXS_POLNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120593376|gb|ABM36815.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas
           naphthalenivorans CJ2]
          Length = 636

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 325/642 (50%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  ++ L   +LK LADELRA VI +VS+TGGHL S+LG +ELTVALHYVFN 
Sbjct: 4   LLETINSPADLRRLPRAQLKALADELRAYVIDSVSQTGGHLSSNLGTVELTVALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGRR++M T+RQ  GLSGF +R ESEYD FGT HSSTSISA
Sbjct: 64  PDDRLVWDVGHQTYPHKILTGRRERMGTLRQLGGLSGFPRRDESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPT 254
            LGMA+  + KG   N VAVIGDG+M+AG A+EA+NNAG  D   ++V+LNDN  +S+  
Sbjct: 124 ALGMALAAEFKGENRNAVAVIGDGSMSAGMAFEALNNAGVHDHCKLLVVLNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S R     R V K V  Q+  P+ ELA +++ +A+GM+ 
Sbjct: 182 -------PPVGALNRHLAQLMSGRFYASARHVGKKVL-QVAPPLLELARRLESHAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPYAE 372
              + +FE  G  YIGP+DGH+++ L+  LE +++   T  GP  +HVVT+KG+GY  AE
Sbjct: 233 -VPAAVFESFGFNYIGPIDGHDLESLIPTLENIRHLMATGAGPQFLHVVTKKGQGYKLAE 291

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDP+ G Q  S+   Q++T  F   L   AE D  +V I  AM  G+G+
Sbjct: 292 ADPIAYHGPGKFDPSMGLQKSSAPAKQTFTQVFGRWLCDMAEHDPRLVGITPAMREGSGM 351

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R  DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 352 VEFHKRFPKRYHDVGIAEQHAVTFAAGMACEGLKPVLAIYSTFLQRGYDQLIHDVALQNL 411

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAGLVGADG TH G++D+ ++ C+PNM +  P+DE E   ++ TA    D P 
Sbjct: 412 PVVFALDRAGLVGADGATHAGAYDIPYLRCIPNMGIACPADENECRKLLTTAFE-QDSPV 470

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GVE   G K +P   GKG I  EG  +A+L +GT +   L A+  L +  
Sbjct: 471 AVRYPRGAGAGVEPEAGLKSLPF--GKGEIRREGSGIAILAFGTLLYPALQAAEKLGA-- 526

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TV + R+ KPLD  L+  +A  HEVL+T+EEG+I GG GS V + L   G++   ++
Sbjct: 527 ---TVVNMRWAKPLDTELLLKVAAGHEVLVTLEEGAIMGGAGSAVGEALQAAGVVKPLLQ 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
              L L D +I+HG  A  LA  GL  + I A V +  G  +
Sbjct: 584 ---LGLKDEFIEHGEVAVLLALQGLDAAGIEAAVRSRFGSFK 622


>gi|426411714|ref|YP_007031813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. UW4]
 gi|426269931|gb|AFY22008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. UW4]
          Length = 632

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 319/661 (48%), Positives = 433/661 (65%), Gaps = 40/661 (6%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFD----PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           +G+  AE     YH + K +    PAT  +  S  +   Y+  F E L   A  D  +V 
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPATAPKKASGPK---YSGVFGEWLCDMAAADPRLVG 349

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YD
Sbjct: 350 ITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYD 409

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+
Sbjct: 410 QLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML 469

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            T   + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   
Sbjct: 470 -TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQLAEA 526

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           L  +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE ++ GG G  V +FL
Sbjct: 527 LKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAVMGGAGGAVSEFL 581

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           A++ +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++
Sbjct: 582 ARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLNEAGIEASI-------RERLQLLN 631

Query: 721 F 721
            
Sbjct: 632 I 632


>gi|33593754|ref|NP_881398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis
           Tohama I]
 gi|384205042|ref|YP_005590781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS]
 gi|408414646|ref|YP_006625353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis
           18323]
 gi|41016953|sp|Q7VV87.1|DXS_BORPE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33563827|emb|CAE43071.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis
           Tohama I]
 gi|332383156|gb|AEE68003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS]
 gi|401776816|emb|CCJ62055.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis
           18323]
          Length = 620

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 326/630 (51%), Positives = 423/630 (67%), Gaps = 27/630 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  ++ L  RELK+LADELR  V+ +VS+TGGHL S+LG +EL++ALHYVF
Sbjct: 3   TELLDRILSPADLRQLDRRELKRLADELRGFVLESVSRTGGHLSSNLGTVELSLALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR+ M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRREGMAHLRQQGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   + +++V+LNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVVLNDND-MSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S +     + V + V + +  P+ ELA +++E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGQFYAAAKNVGRAVLQHV-PPVLELARRLEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ ++     G   +HVVT KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLR--ALPGLQFLHVVTRKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F + L   AE D+ +V I  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQAKAPARKTFTQVFGQWLCDMAERDERLVGITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAGLACEG KP  AIYS+F+QR YDQ+VHDV LQ L
Sbjct: 349 VEFEQRFPQRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQLVHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ F+ C+PNMVV APSDE+E   +++T       P+
Sbjct: 409 DVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVAAPSDESEARLLLSTCYE-HPGPA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G  +  G   +PL  GKG +  EG R+A+LG+GT VQ+ L A+  +++  
Sbjct: 468 SVRYPRGAGCGAAVGEGLATVPL--GKGLVRREGRRIAILGFGTLVQAALGAAGQIDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
               VAD RF KPLD  L+  LA  H+ L+TVEE +I GG GS V++ LA+ G+   T+ 
Sbjct: 524 ---MVADMRFVKPLDRELVLELAARHDALVTVEEAAIMGGAGSAVLETLAEAGV---TLP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
              L LPD +IDHG  A  LA  GL  + I
Sbjct: 578 VLQLGLPDAFIDHGDQAALLAGLGLDAAGI 607


>gi|398925618|ref|ZP_10661992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM48]
 gi|398171979|gb|EJM59867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM48]
          Length = 632

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/658 (48%), Positives = 428/658 (65%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG I  +G +VALL +G  +   L  
Sbjct: 472 GHLYEGPAAVRYPRGNGPNANIEKDLE--PIEIGKGVIRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L+++S 
Sbjct: 585 NILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLSI 632


>gi|389681780|ref|ZP_10173124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           O6]
 gi|388554315|gb|EIM17564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           O6]
          Length = 632

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 319/642 (49%), Positives = 423/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K DP  +       A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLDPLDSPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P MVVM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMVVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G +VALL +G  +     A
Sbjct: 472 GHLYNGPAAVRYPRGTGPNTTIEKDLQ--PIEIGKGVVRRQGSKVALLVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL  ++ L  TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA++
Sbjct: 525 EALKVADKLDATVVDMRFVKPLDEALVREIAASHELLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A V
Sbjct: 585 AILKPILH---LGLPDLYVEHAKPAQMLAECGLDEAGIEAAV 623


>gi|387129646|ref|YP_006292536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM7]
 gi|386270935|gb|AFJ01849.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM7]
          Length = 610

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 314/631 (49%), Positives = 427/631 (67%), Gaps = 33/631 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ LS ++L QLA E+RA +I +V +TGGH+ S+LGVIELT+ALHYVFN 
Sbjct: 7   LLEQIDSPQDLRQLSRKQLPQLASEIRALIIDSVQQTGGHIASNLGVIELTLALHYVFNT 66

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ+Y HKI+TGRRDKMHTMRQ DGLSGF KRSES +D FG GHSSTS+SA
Sbjct: 67  PEDRLVWDVGHQSYAHKIITGRRDKMHTMRQADGLSGFPKRSESPFDSFGVGHSSTSVSA 126

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+           VA+IGDGA+TAGQAYEA+ +AG L ++++V+LNDN ++S+   
Sbjct: 127 ALGMALAAQSNQDARRAVAIIGDGALTAGQAYEALAHAGDLSANLLVVLNDN-EMSISRN 185

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VG +++ L+RL S+R     RE +K V ++I     E+A + +E+ +GM+  
Sbjct: 186 --------VGGMANYLARLLSSRFYTSAREGSKKVLEKIPSAW-EIARRAEEHMKGMV-- 234

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEE+G  YIGP+DGHN+D L+  L  ++N K  GP  +H+VT+KG+G+  AE+  
Sbjct: 235 VPGTLFEEMGFNYIGPIDGHNLDTLITTLGNLRNCK--GPQFLHIVTKKGKGFTPAEQEP 292

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
            KYHGV+   PA GK    S+  +SYT  F++ L+  A  DK ++ I  AM  G+GLN F
Sbjct: 293 CKYHGVS---PAGGK----SSAGKSYTQVFSDWLVDMAVADKQLIGITPAMCEGSGLNRF 345

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             RFP R FDVGIAEQHAVT AAGLACE  KP  AIYS+F+QRAYDQ++HDV LQ LPV 
Sbjct: 346 AERFPDRYFDVGIAEQHAVTLAAGLACENKKPVVAIYSTFLQRAYDQLIHDVALQNLPVL 405

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH GSFD+T++ C+PNM++MAP+DE E   M+ T    D  P+  R
Sbjct: 406 FAIDRAGLVGADGPTHAGSFDLTYLRCIPNMLIMAPADENECRQMLTTGFHFDG-PAAVR 464

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G G  + P    +P  +GK + L +G++VA+L +G+ + + L A    ++     
Sbjct: 465 YPRGVGSGSPVQPDLSALP--IGKAKQLRQGQKVAILAFGSMLSAALEAGEKTDA----- 517

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           +V + RF KPLD  LI  LA SH++LIT+EE ++ GG GS V ++L+  G        R 
Sbjct: 518 SVINMRFVKPLDTTLINQLADSHDLLITIEENAVAGGAGSGVAEYLSSIG---SKTPIRL 574

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + LPDR+ D G+    L   GL+ + +  T+
Sbjct: 575 IGLPDRFQDQGNHQQMLNDVGLSANGLIDTI 605


>gi|375108095|ref|ZP_09754356.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderiales bacterium
           JOSHI_001]
 gi|374668826|gb|EHR73611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderiales bacterium
           JOSHI_001]
          Length = 638

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 323/650 (49%), Positives = 428/650 (65%), Gaps = 30/650 (4%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+ LL  +N P  ++ LS  ELK LA ELRA V+ +VS+TGGHL S+LG +ELTVALH+V
Sbjct: 2   PSNLLHRVNSPAEVRALSRSELKTLAQELRAFVLQSVSETGGHLSSNLGTVELTVALHHV 61

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           FN P DRI+WDVGHQTYPHK+LTGRR++M T+RQ  G+SGF +R ESEYD FGT HSSTS
Sbjct: 62  FNTPYDRIVWDVGHQTYPHKVLTGRRERMGTLRQLGGISGFPRRDESEYDAFGTAHSSTS 121

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           ISA LGMA+   +KG   + VAVIGDGA+T G A+EA+NNAG   +DM+V+LNDN ++S+
Sbjct: 122 ISAALGMALAAKIKGEARHAVAVIGDGALTGGMAFEALNNAGVSQADMLVVLNDN-EMSI 180

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R    +RE AK V K    P++E A + +E+ +GM
Sbjct: 181 S--------PPVGALNKHLARLLSGRTYSGVREGAKSVLKNT--PLYEFAKRFEEHTKGM 230

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +     T+FEE+G  YIGP+DGH++D LV  LE +++ +  GP  +HV+T+KG GY  AE
Sbjct: 231 V--VPGTIFEEMGFTYIGPIDGHDLDALVPTLENLRDKR--GPHFLHVITKKGYGYKLAE 286

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG +KFDPA G    ++    ++T  F + L   A  D  +V I  AM  G+G+
Sbjct: 287 ADPINYHGPSKFDPAVGIVKPATPPKTTFTQVFGQWLCDMAAADPRLVGITPAMREGSGM 346

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F RRFP R FDV IAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 347 VEFERRFPGRYFDVSIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNL 406

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAGLVGADG TH G++D+ F+ C+PNM ++ P+DE E    ++TA      P+
Sbjct: 407 PVVFALDRAGLVGADGATHAGNYDIAFVRCIPNMAMLTPADENECRQALSTAFG-HGGPA 465

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG-----ERVALLGYGTAVQSCLAASAL 607
           C RYPRG G+G  L PG   +P   G+ R  + G      R+A+L +GT +   LAA+  
Sbjct: 466 CVRYPRGAGVGTALEPGFATLPWGKGELRREVRGGSASARRIAILAFGTLLYPALAAAEK 525

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++      VA+ RF KPLD  L+  LA+SH+ L+T+E+G I GG GS V + LA  G+ 
Sbjct: 526 LDA-----AVANMRFAKPLDTELVLQLARSHDALVTLEDGCIAGGAGSAVAEALAAAGIQ 580

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
              ++   L LPD +I HG PA  +A  GL  + I  ++    G  + +L
Sbjct: 581 LPLLQ---LGLPDEFIQHGDPAKLMAMLGLDAAGIEQSITQRFGAPQLSL 627


>gi|398910222|ref|ZP_10654918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM49]
 gi|398186484|gb|EJM73858.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM49]
          Length = 632

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 317/658 (48%), Positives = 429/658 (65%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++ 
Sbjct: 585 NILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLNI 632


>gi|134093560|ref|YP_001098635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herminiimonas
           arsenicoxydans]
 gi|133737463|emb|CAL60506.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Herminiimonas arsenicoxydans]
          Length = 609

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 324/630 (51%), Positives = 422/630 (66%), Gaps = 34/630 (5%)

Query: 86  MKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVG 145
           M++ +  +LKQLADELRA V+ +VS TGGHL S+LG +ELT+ALH VFN P+DRI+WDVG
Sbjct: 1   MRHFTRPQLKQLADELRAFVLESVSATGGHLSSNLGTVELTIALHNVFNTPEDRIIWDVG 60

Query: 146 HQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL 205
           HQTYPHKILTGRRD+MH++RQ DG+SGF +R ES YD FGT HSSTSISA LGMA+    
Sbjct: 61  HQTYPHKILTGRRDQMHSLRQRDGISGFPRRDESVYDTFGTAHSSTSISAALGMALAART 120

Query: 206 KGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPV 264
           KG   + +AVIGDGAMTAG A+EA+NNAG + D +++VILNDN  +S+         PPV
Sbjct: 121 KGENRHAIAVIGDGAMTAGMAFEALNNAGIHDDINLLVILNDN-DMSIS--------PPV 171

Query: 265 GALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEEL 324
           GAL+  L+RL S +     + V K V   +  P+ ELA + +E+A+GMI    +T+FEE 
Sbjct: 172 GALNRYLARLMSGQFYAAAKNVGKTV---LPAPVRELAKRFEEHAKGMI--VPATMFEEF 226

Query: 325 GLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKF 384
           G  YIGP+DGH++D L+  L+ +K+ K  GP  +HVVT+KG+GY  AE     YHG  KF
Sbjct: 227 GFNYIGPIDGHDLDSLIPTLQNLKHLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKF 284

Query: 385 DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCF 444
           DPA G +  ++A   +YT+ F + L   A  D  ++ I  AM  G+G+  F RRFP R +
Sbjct: 285 DPAEGIK-PAAASKVTYTSVFGDWLCDMAAADDKLIGITPAMREGSGMVEFERRFPGRYY 343

Query: 445 DVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLV 504
           DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLV
Sbjct: 344 DVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLV 403

Query: 505 GADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV 564
           GADG TH G++D+ ++ C+PNMVVMA SDE E   M++T    +  P+  RYPRG GIG 
Sbjct: 404 GADGATHAGNYDIAYLRCIPNMVVMAASDENECRQMLSTGFHYNG-PAAVRYPRGGGIGA 462

Query: 565 ELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 624
           ++      IPL  G G I  EG+R+A+L +GT V   L A   L++     TVA+ RF K
Sbjct: 463 KVEKNLATIPL--GTGEIRREGKRIAILAFGTMVAPSLRAGEELDA-----TVANMRFVK 515

Query: 625 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRY 681
           PLD  L++ LA +HE ++TVEEG I G     V        +      +PL+   LPD++
Sbjct: 516 PLDVELLKRLAATHEAIVTVEEGCIMGGAGAAVAEALAAAGI-----VKPLLNLGLPDQF 570

Query: 682 IDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           IDHG     LA  GL  + IAAT+    G+
Sbjct: 571 IDHGDAQQLLAMCGLDAAGIAATIRQRFGK 600


>gi|171060047|ref|YP_001792396.1| deoxyxylulose-5-phosphate synthase [Leptothrix cholodnii SP-6]
 gi|229813281|sp|B1Y2X5.1|DXS_LEPCP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|170777492|gb|ACB35631.1| deoxyxylulose-5-phosphate synthase [Leptothrix cholodnii SP-6]
          Length = 639

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 325/642 (50%), Positives = 426/642 (66%), Gaps = 36/642 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I  P  ++ LS  ELKQLADELR  V+ +VS+TGGHL S+LG +ELTVALH+VF+
Sbjct: 5   PLLPRIQSPADVRRLSRAELKQLADELREFVLQSVSRTGGHLSSNLGTVELTVALHHVFD 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M T+RQ  GLSGF +R ESEYD FGT HSSTSIS
Sbjct: 65  TPEDRLVWDVGHQTYPHKILTGRRDRMSTLRQLGGLSGFPRRDESEYDTFGTAHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS----DMIVILNDNKQV 250
           A LGMA+    KG K + VA+IGDG+MTAG A+EA+NN G   +    +++VILNDN  +
Sbjct: 125 AALGMALAAQQKGEKRHAVAIIGDGSMTAGMAFEALNNGGMPHAGRVPNLLVILNDN-DM 183

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGAL+  L+RL S R     RE AK V K     + ELA + +E+A+
Sbjct: 184 SIS--------PPVGALNKYLARLLSGRFYAAAREGAKSVLKS-APTLFELARRFEEHAK 234

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     T+FEE G  Y+GP+DGH++D L+  LE +++    G   +HVVT+KG GY  
Sbjct: 235 GMV--VPGTIFEEFGFNYVGPIDGHDLDALIPTLENLRDKP--GAQFLHVVTKKGYGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KFDP  G    ++    ++T  F + L   A  D  +VAI  AM  G+
Sbjct: 291 AEADPIAYHGPGKFDPQIGLVKPATPPKTTFTQVFGQWLCDMAAADPKLVAITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R  DVGIAEQHAVTFAAGLACEGL+P  AIYS+F+QRAYDQ++HDV LQ
Sbjct: 351 GMVEFHKRFPERYHDVGIAEQHAVTFAAGLACEGLRPVVAIYSTFLQRAYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LP+ FA+DRAGLVGADG TH G++D+ F+ C+PNM ++AP+DEAE    ++TA A  D 
Sbjct: 411 NLPMVFALDRAGLVGADGATHAGAYDIAFVRCIPNMSLLAPADEAETRRALSTAFA-HDG 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL------IEGERVALLGYGTAVQSCLAA 604
           P   RYPRG+G G  +  G + +P   G+G +       + G R+A+L +GT +   LAA
Sbjct: 470 PVAVRYPRGSGAGTAVETGFETLPW--GRGEVRRQAGGHVRGPRIAILAFGTLLYPALAA 527

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TVA+ RF KPLD AL+  LA++H+ L+TVEEG + GG GS V++ L   
Sbjct: 528 AEKLDA-----TVANMRFIKPLDAALVEQLARTHDALVTVEEGCLMGGAGSAVLEALQAA 582

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           GL    +    L LPD++I+HG PA  LA  GL  + I A +
Sbjct: 583 GLQTPVLT---LGLPDQFIEHGDPALLLAACGLDSAGIEAAI 621


>gi|386332877|ref|YP_006029046.1| 1-deoxy-d-xylulose-5-phosphate synthase protein [Ralstonia
           solanacearum Po82]
 gi|334195325|gb|AEG68510.1| 1-deoxy-d-xylulose-5-phosphate synthase protein [Ralstonia
           solanacearum Po82]
          Length = 637

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 323/640 (50%), Positives = 427/640 (66%), Gaps = 33/640 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG IELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTIELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA G   +G     +AVIGDGAM+AG A+EAMNNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMAQGAKTRGESRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH++  LV  L+ ++       GP  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVA-KFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           AE    KYH  + +FDPA G    ++    SYT  F + L   A  DK +V I  AM  G
Sbjct: 291 AEADPVKYHAASGRFDPAVGFAKPATPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           +G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV L
Sbjct: 351 SGMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVAL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D
Sbjct: 411 QNLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QD 469

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            P+  RYPRG G GV + P    +P+   EV +      G+RVA+L +G+ V    AA+ 
Sbjct: 470 CPTAVRYPRGAGPGVAVQPTLDPLPVGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGL 665
            L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+
Sbjct: 530 RLDA-----TVVNMRFVKPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGV 584

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               ++   L LPDR+IDHG  A  LA  GL  + I A++
Sbjct: 585 ATPVLQ---LGLPDRFIDHGDHAALLALCGLDANGILASI 621


>gi|398948107|ref|ZP_10672587.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM33]
 gi|398161115|gb|EJM49358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM33]
          Length = 632

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 317/657 (48%), Positives = 429/657 (65%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGKGIVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++
Sbjct: 585 NILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLN 631


>gi|333916048|ref|YP_004489780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
 gi|333746248|gb|AEF91425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
          Length = 626

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/631 (50%), Positives = 427/631 (67%), Gaps = 24/631 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ LS  ELK LA +LRA V+ +VSKTGGHL S+LG +ELTVALH VF+ 
Sbjct: 8   LLQTIDDPSDLRRLSRAELKTLAQQLRAYVLDSVSKTGGHLSSNLGTVELTVALHAVFDT 67

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGRR++M ++RQ  GLSGF +R+ES YD FGT HSSTSISA
Sbjct: 68  PYDRVVWDVGHQTYPHKILTGRRERMASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISA 127

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    KG     +AVIGDGAMTAG A+EA+NNAG  D++++VILNDN  +S+   
Sbjct: 128 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDN-DMSIS-- 184

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL+  L++L S +   + R++ K V KQ+  P+ ELA ++++ A+GM+  
Sbjct: 185 ------PPVGALNRYLAQLMSGQFYAKARDMGKSVLKQV-PPLLELAKRLEQQAKGMV-- 235

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
             +TLFE  G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE   
Sbjct: 236 VPATLFENFGFNYIGPIDGHDLDSLIPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADP 293

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHG  KFDP+ G    ++   Q++T  F   L   A+ D+ +V I  AM  G+G+  F
Sbjct: 294 VAYHGPGKFDPSVGLVKPATPPKQTFTQVFGHWLCDMADKDQRLVGITPAMREGSGMVEF 353

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            RRFP R +DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQKLPV 
Sbjct: 354 HRRFPGRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVV 413

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G++D+ F+ C+P+M +  P+DE E   ++ TA    D P   R
Sbjct: 414 FALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLLTTAYE-QDHPVAVR 472

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+GV      +G+P   G+ R     ++VA+L +GT +   LAA+  L++     
Sbjct: 473 YPRGAGVGVAPLESLEGLPFGKGEVRRESAKKQVAILAFGTLLYPALAAAEALDA----- 527

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           TV + R+ KPLD  L+R +A +HE+++TVEEG I GG GS V + L   G+   T +   
Sbjct: 528 TVVNMRWAKPLDEELLRQVASTHELIVTVEEGCIMGGAGSAVAESLQAAGI---TRQLLQ 584

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPD +I+HG PA  LA  GL  + I A+V
Sbjct: 585 LGLPDEFIEHGDPAKLLALQGLDAAGIEASV 615


>gi|350546104|ref|ZP_08915528.1| 1-deoxy-D-xylulose 5-phosphate synthase [Candidatus Burkholderia
           kirkii UZHbot1]
 gi|350526130|emb|CCD41296.1| 1-deoxy-D-xylulose 5-phosphate synthase [Candidatus Burkholderia
           kirkii UZHbot1]
          Length = 638

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 326/639 (51%), Positives = 419/639 (65%), Gaps = 34/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ L  R+L+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 4   LLKTIDDPADLRALDRRQLQPLADELRAYVLDSVSQTGGHLSSNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTYPHKILT RRD+M  +RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 64  PNDRIVWDVGHQTYPHKILTSRRDQMPGLRQLGGISGFPRRSESEYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA+   L+      +AVIGDGAMTAG A+EAMNNAG  D   ++VILNDN  +S+  
Sbjct: 124 ALGMAIANKLQSDNRYSIAVIGDGAMTAGMAFEAMNNAGVADDLPLLVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL   L+RL S R     R   + V +    PM +LA K++E+A+GMI 
Sbjct: 182 -------PPVGALHRHLARLMSGRFYAAARAGVERVLRA-APPMLDLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFEE G  YIGP+DGH++D L+  L+ +K  +  G   +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEEFGFNYIGPIDGHDLDSLIPTLQNIKELR--GLQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++YT  F E L   A  D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIKPSTAPSKKTYTQVFGEWLCDAAAQDSRVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVTFA GLA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYFDVGIAEQHAVTFAGGLAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM V+A SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGLVGADGATHAGNYDLAFLRCIPNMTVIAASDENECRQMLYTALQ-QSNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIE-------GERVALLGYGTAVQSCLAASAL 607
           RYPRG G GV +      IP  VG+G I  E       G+R+A+  +GT V   LAA+  
Sbjct: 469 RYPRGAGTGVAMVKQMTAIP--VGRGEIRRESSQKLGSGKRIAICAFGTMVAPSLAAAEA 526

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L+     LTV + RF KP+D  L+R LA +H+ ++T+EEG+I GG GS  V+ L    ++
Sbjct: 527 LD-----LTVVNMRFVKPIDADLLRELAATHDAIVTIEEGAIMGGAGSACVEALLASSII 581

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD +IDHG PA  LA  GL    IA ++
Sbjct: 582 KPVLQ---LGLPDTFIDHGDPAKLLASVGLDAIGIARSI 617


>gi|421897746|ref|ZP_16328113.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum MolK2]
 gi|206588952|emb|CAQ35914.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum MolK2]
          Length = 637

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 323/640 (50%), Positives = 427/640 (66%), Gaps = 33/640 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG IELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTIELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA G   +G     +AVIGDGAM+AG A+EAMNNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMAQGAKTQGESRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH++  LV  L+ ++       GP  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVA-KFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           AE    KYH  + +FDPA G    ++    SYT  F + L   A  DK +V I  AM  G
Sbjct: 291 AEADPVKYHAASGRFDPAVGFAKPATPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           +G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV L
Sbjct: 351 SGMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVAL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D
Sbjct: 411 QNLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QD 469

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            P+  RYPRG G GV + P    +P+   EV +      G+RVA+L +G+ V    AA+ 
Sbjct: 470 CPTAVRYPRGAGPGVAVQPTLDPLPVGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGL 665
            L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+
Sbjct: 530 RLDA-----TVVNMRFVKPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGV 584

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               ++   L LPDR+IDHG  A  LA  GL  + I A++
Sbjct: 585 ATPVLQ---LGLPDRFIDHGDHAALLALCGLDANGILASI 621


>gi|398879894|ref|ZP_10634975.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM67]
 gi|398195212|gb|EJM82263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM67]
          Length = 632

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/657 (47%), Positives = 428/657 (65%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAATDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNATIEKDLQ--PIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD  L+R +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEELVREIAGSHELLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++
Sbjct: 585 NILKSVLH---LGLPDLYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLA 631


>gi|344171952|emb|CCA84578.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia syzygii R24]
          Length = 636

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/639 (49%), Positives = 426/639 (66%), Gaps = 32/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR +M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRRGQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G     +AVIGDGAM+AG A+EAMNNAG Y +  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH+++ LV  L+ ++     G  P  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +  +     SYT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPAARPSKISYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHA TFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPNRYYDVGIAEQHAATFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           P+  RYPRG G GV + P  + +P+   EV +      G RVA+L +G+ V    AA+  
Sbjct: 470 PTAVRYPRGAGSGVAVLPTLEPLPVGKAEVRRASTAPAGRRVAILAFGSMVAPATAAAER 529

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+ 
Sbjct: 530 LDA-----TVVNMRFVKPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVA 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR++DHG  A  LAQ GL  + I A++
Sbjct: 585 TPVLQ---LGLPDRFVDHGDHAALLAQCGLDANGILASI 620


>gi|409422488|ref|ZP_11259583.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. HYS]
          Length = 632

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/642 (48%), Positives = 425/642 (66%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLESLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +MHT+RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRQRMHTLRQKDGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNDPRKSIAVIGDGALTAGMAFEALNHAQEVDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+  L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLITTLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATG-KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F + L   A  D+ +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPVDKPAAAPKKAGGPKYSAVFGQWLCDMAAADQRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++
Sbjct: 353 AMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG+G     P  N   PLE+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGSGPNA--PIENSLEPLEIGKGIVRRQGSKVALLVFGVQLSEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SH++L+T+EE +I GG G+ V +FLA++
Sbjct: 530 AEQIDA-----TVVDMRFVKPLDEALVREIAGSHDLLVTIEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 AVLKPMLH---LGLPDVYVEHAKPAQMLAECGLDAAGIEASV 623


>gi|319792407|ref|YP_004154047.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS]
 gi|315594870|gb|ADU35936.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS]
          Length = 618

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/637 (49%), Positives = 426/637 (66%), Gaps = 26/637 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL T++ P  ++     +L+QL+DE+RA V+ NVS+TGGHL S+LG +ELTVALH+VFN
Sbjct: 3   PLLPTLHDPSPIRQYDRAQLRQLSDEVRACVLDNVSRTGGHLSSNLGTVELTVALHHVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRR++M T+RQ  G+SGF +RSESEYD FGT HSSTSIS
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSESEYDTFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG     VA+IGDGA+TAG A+EA+NNAG  D  ++VILNDN  +S+  
Sbjct: 123 AALGMAMAAKQKGEDRYTVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S       + V K V +    P+ ELA + +++A+GM+ 
Sbjct: 181 -------PPVGALNRYLAQLMSGNFYAAAKNVGKSVLRA-APPLFELAKRFEQHAKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  Y+GP+DGH++D LV  LE +K+   +GP  +HVVT+KG+GY  AE  
Sbjct: 232 -VPATLFEQFGFNYVGPIDGHDLDSLVPTLENLKH--LSGPQFLHVVTKKGQGYKLAEAD 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP  G    ++   Q++T  F + L   A  D  +V I  AM  G+GL  
Sbjct: 289 PVAYHGPGKFDPQVGLVKSTTVAKQTFTQVFGQWLCDTAAHDGRLVGITPAMREGSGLVE 348

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 349 FEQRFPDRYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 408

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE EL  ++ T+A   + P   
Sbjct: 409 VFALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERELRQLL-TSAYEQNHPVAV 467

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV        +PL  GKG +  EG+R+A+L +G+ +   L A+  L++    
Sbjct: 468 RYPRGAGAGVAPHLTLDALPL--GKGEVRREGKRIAILAFGSLLYPALTAAESLDA---- 521

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + R+ KPLD  L+  +A +H+ ++T+EEG ++GG GS V++ L    +    ++  
Sbjct: 522 -TVVNMRWAKPLDVELLLQVAGTHDAIVTLEEGATMGGAGSAVLEALQAANVQKPVLQ-- 578

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
            L LPDR+I+HG PA  LA  GL  + IAA++    G
Sbjct: 579 -LGLPDRFIEHGDPAKLLASIGLDATGIAASITQRFG 614


>gi|404497671|ref|YP_006721777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|418067360|ref|ZP_12704705.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
 gi|118595485|sp|Q39RT4.1|DXS2_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|78195273|gb|ABB33040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|373558965|gb|EHP85282.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
          Length = 635

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 320/635 (50%), Positives = 420/635 (66%), Gaps = 24/635 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLDTI  P  +KN+   EL  LADE+R  +I  VS+TGGHL S+LG +EL+VALHY F++
Sbjct: 4   LLDTITGPADLKNIPREELPGLADEIRRFLIETVSQTGGHLASNLGAVELSVALHYCFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+++WDVGHQ Y HKILTGRR+  HT RQ  G+SGF KRSES +D FG GHSSTSISA
Sbjct: 64  PADKLIWDVGHQAYTHKILTGRRESFHTQRQYKGISGFPKRSESPHDAFGAGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMA  +DLKG  +  +AVIGDG++T G AYEA+N AG+L  ++IV+LNDN ++S+   
Sbjct: 124 GLGMAAAQDLKGSGSRAIAVIGDGSLTGGMAYEALNQAGHLKKNLIVVLNDN-EMSISQN 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKVDEYARGM 312
                   VGA SS +SR  +    R+L++  +G+ +    IG  +   A + +   +G 
Sbjct: 183 --------VGAFSSFVSRKMTGSDFRKLKKEMQGLLENIPAIGKDILHFARRAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +   LFE LG  YIGP+ GH++  L+ + E VK  +  GPVL+HV+T KG+GY  AE
Sbjct: 235 L--TPGMLFEALGFDYIGPIPGHDLPQLLEVFENVKGLE--GPVLVHVMTTKGKGYQPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           +    +HGV  FD ATGK         SYT  F   L+  AE D+ ++AI AAM  GTGL
Sbjct: 291 ENPAAFHGVGPFDVATGKTTGGKPGAASYTGVFGATLVKLAEEDEKIIAITAAMPDGTGL 350

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHA+TFAAGLA +G +P  AIYS+F+QRAYDQV HDV LQKL
Sbjct: 351 TPFAKRFPERFFDVGIAEQHALTFAAGLAADGFRPVTAIYSTFLQRAYDQVFHDVCLQKL 410

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DR GLVG DGPTH G+FD++++  LP M +MAP DE EL HM+ T A    RP 
Sbjct: 411 PVTMALDRGGLVGDDGPTHHGTFDLSYLRHLPEMTLMAPKDENELQHMLKT-AIYAGRPV 469

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G  LP       LE+G+G +L EG+ VA++  G+ V     A+ LLE+ G
Sbjct: 470 ALRYPRGAGYG--LPLDQTIQSLEIGRGELLTEGDDVAIVAIGSTVYPAQEAAKLLEARG 527

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +R TV +ARF KPLD  LI   A+    ++TVEE ++ GGFGS V++ LA +G+ D  V+
Sbjct: 528 IRATVVNARFVKPLDRELILGAARRTGCIVTVEENALQGGFGSAVLELLADEGMTD--VR 585

Query: 672 WRPLVLPDRYIDHGSPADQLAQ-AGLTPSHIAATV 705
            + + +PDR+I+ G P  QL +  GL  + IAATV
Sbjct: 586 AKRIGIPDRFIEQG-PQPQLRKDLGLDGAGIAATV 619


>gi|83746514|ref|ZP_00943565.1| 1-deoxy-D-xylulose 5-phosphate synthase [Ralstonia solanacearum
           UW551]
 gi|207743825|ref|YP_002260217.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum IPO1609]
 gi|83726845|gb|EAP73972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Ralstonia solanacearum
           UW551]
 gi|206595225|emb|CAQ62152.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum IPO1609]
          Length = 636

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 322/639 (50%), Positives = 425/639 (66%), Gaps = 32/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG IELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTIELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA G   +G     +AVIGDGAM+AG A+EAMNNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMAQGAKTQGESRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH++  LV  L+ ++       GP  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +  +     SYT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPATRPAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           P+  RYPRG G GV + P    +P+   EV +      G+RVA+L +G+ V    AA+  
Sbjct: 470 PTAVRYPRGAGPGVAVQPTLDPLPVGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAER 529

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+ 
Sbjct: 530 LDA-----TVVNMRFVKPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEVLAAAGVA 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR+IDHG  A  LA  GL  + I A++
Sbjct: 585 TPVLQ---LGLPDRFIDHGDHAALLALCGLDANGILASI 620


>gi|160897685|ref|YP_001563267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
 gi|160363269|gb|ABX34882.1| deoxyxylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
          Length = 638

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 320/631 (50%), Positives = 427/631 (67%), Gaps = 24/631 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TI+ P  ++ LS  ELK LA +LRA V+ +VSKTGGHL S+LG +ELTVALH VF+ 
Sbjct: 20  LLQTIDDPSDLRRLSRAELKTLAQQLRAYVLDSVSKTGGHLSSNLGTVELTVALHAVFDT 79

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGRR++M ++RQ  GLSGF +R+ES YD FGT HSSTSISA
Sbjct: 80  PYDRVVWDVGHQTYPHKILTGRRERMASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISA 139

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    KG     +AVIGDGAMTAG A+EA+NNAG  D++++VILNDN  +S+   
Sbjct: 140 ALGMALAAKQKGEDRRAIAVIGDGAMTAGMAFEALNNAGVTDANLLVILNDN-DMSIS-- 196

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL+  L++L S +   + R++ K V KQ+  P+ ELA ++++ A+GM+  
Sbjct: 197 ------PPVGALNRYLAQLMSGQFYAKARDMGKSVLKQV-PPLLELAKRLEQQAKGMV-- 247

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
             +TLFE  G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE   
Sbjct: 248 VPATLFENFGFNYIGPIDGHDLDSLIPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADP 305

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHG  KFDP+ G    ++   Q++T  F   L   A+ D+ +V I  AM  G+G+  F
Sbjct: 306 VAYHGPGKFDPSVGLVKPATPPKQTFTQVFGHWLCDMADKDQRLVGITPAMREGSGMVEF 365

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +RFP R +DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQKLPV 
Sbjct: 366 HKRFPGRYYDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVV 425

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G++D+ F+ C+P+M +  P+DE E   ++ TA    D P   R
Sbjct: 426 FALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLLTTAYE-QDHPVAVR 484

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+GV      +G+P   G+ R     ++VA+L +GT +   LAA+  L++     
Sbjct: 485 YPRGAGVGVAPLESLEGLPFGKGEVRRESAKKQVAILAFGTLLYPALAAAEALDA----- 539

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           TV + R+ KPLD  L+R +A +HE+++TVEEG I GG GS V + L   G+   T +   
Sbjct: 540 TVVNMRWAKPLDEELLRQVASTHELIVTVEEGCIMGGAGSAVAESLQAAGI---TRQLLQ 596

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPD +I+HG PA  LA  GL  + I A+V
Sbjct: 597 LGLPDEFIEHGDPAKLLALQGLDAAGIEASV 627


>gi|395797727|ref|ZP_10477015.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Ag1]
 gi|395338095|gb|EJF69948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Ag1]
          Length = 632

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/642 (48%), Positives = 423/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPATPLLDRANTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAAPKKPSGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G  VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSGVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  S I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDESGIEASV 623


>gi|407940295|ref|YP_006855936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
 gi|407898089|gb|AFU47298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
          Length = 631

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/640 (49%), Positives = 426/640 (66%), Gaps = 30/640 (4%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P PLL TIN P  ++ LS  +LK LA ELR  V+ +VS+TGGHL S+LG +ELTVALH+V
Sbjct: 5   PFPLLQTINDPADLRRLSRADLKVLATELREFVLQSVSQTGGHLSSNLGTVELTVALHHV 64

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           FN P+DR++WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF +R+ES YD FGT HSSTS
Sbjct: 65  FNTPEDRLVWDVGHQTYPHKILTGRRDRMHTLRQLGGISGFPQRAESVYDTFGTAHSSTS 124

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           ISA LGMA+    KG   + VA+IGDGAM+AG A+EA+NNAG  D +++V+LNDN  +S+
Sbjct: 125 ISAALGMALAAKRKGDNRHAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDN-DMSI 183

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L++L S +     + V K V + +  P+ E A + ++ A+GM
Sbjct: 184 S--------PPVGALNRYLAQLMSGQFYAAAKNVGKTVLRPV-PPLLEFAKRFEQQAKGM 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +    +TLFE+ G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE
Sbjct: 235 V--VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSLK--GPQFLHVVTKKGQGYKLAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDP+ G    ++   Q++T  F + L   A  D  +V I  AM  G+G+
Sbjct: 291 ADPVAYHGPGKFDPSVGLTKPATPPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGM 350

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 351 VEFEKRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNL 410

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++++A    D P 
Sbjct: 411 PVVFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSSAFE-QDHPV 469

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE------RVALLGYGTAVQSCLAASA 606
             RYPRG+G GV       G+P   G+ R   +GE      R+A+L +GT +   L    
Sbjct: 470 AVRYPRGSGAGVAPLAALDGLPFGKGEIRRERKGEADGKAPRIAILAFGTLLYPALEVGE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGL 665
            L++     TV + R+ KP+D AL+R +A+ H+ L+TVEEG+I GG GS V + L   G+
Sbjct: 530 ALDA-----TVVNMRWAKPIDEALLRKVAERHDALVTVEEGAIMGGAGSAVTEALNAMGI 584

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +   ++   L LPD +I+HG PA  LA  GL  + I A++
Sbjct: 585 VRPVLQ---LGLPDVFIEHGDPAKLLALQGLDAAGIRASI 621


>gi|291613175|ref|YP_003523332.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus
           ES-1]
 gi|291583287|gb|ADE10945.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus
           ES-1]
          Length = 614

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/632 (49%), Positives = 424/632 (67%), Gaps = 27/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TI+ P  ++ L   +L QLADELRA +I +VSKTGGHL S+LG +ELT+ALHY+++
Sbjct: 3   PLLHTIDTPDDLRKLERAQLPQLADELRAFLIESVSKTGGHLSSNLGTVELTIALHYIYD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTY HKILTGRR  M  +R   G+SGF KR+ES YD FGTGHSSTSIS
Sbjct: 63  TPEDRLVWDVGHQTYAHKILTGRRAAMGGLRMAHGISGFPKRNESRYDAFGTGHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV   L G+ N  VA+IGDGAM+ G A+EA+NNAG +D++++VILNDN  +S+  
Sbjct: 123 AALGMAVAARLAGKDNRSVAIIGDGAMSGGMAFEALNNAGAMDANLLVILNDN-DMSISR 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                   PVGAL++ L++L S R    +R  ++ + K +  P+ E A + +E+ +GM+ 
Sbjct: 182 --------PVGALNNYLAKLMSGRFYAAMRRGSEKILKGM-PPVLEFAKRAEEHVKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G  YIGP+DGH++D LV  L  ++  K  GP  +H+VT+KG+GY +AE  
Sbjct: 232 -TPGTLFEEFGFNYIGPIDGHDLDVLVETLGNIR--KLEGPQFLHIVTQKGKGYAHAEDD 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP+ G   K S +  +YT  F E L   A  D  +V I  AM  G+G+  
Sbjct: 289 CVLYHGVGKFDPSHGITAKPSTKP-TYTQVFGEWLCDMAAQDARLVGITPAMCEGSGMVE 347

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  +FP R FDVGIAEQHA+TFAAGLAC+G KP  AIYS+F+QR YDQ++HD+ +Q LPV
Sbjct: 348 FAEKFPQRYFDVGIAEQHALTFAAGLACDGFKPVVAIYSTFLQRGYDQLIHDIAIQNLPV 407

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
             A+DR GLVGADG TH GSFD++++  +PNM VMAP+DE E   M++TA  + D PS  
Sbjct: 408 VLAIDRGGLVGADGATHAGSFDLSYLRSVPNMTVMAPADEKECRQMLSTAFHL-DTPSAV 466

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV +    + IP  VGKG +  EG +VA+L +G+ +   L A+  L++    
Sbjct: 467 RYPRGTGPGVMVQKDLQAIP--VGKGEVRREGGKVAILAFGSMLAPALEAAGQLDA---- 520

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD  L+  LA+ H +L+TVEE ++ GG GS V + LA+ G++   V   
Sbjct: 521 -TVANMRFVKPLDEELVLKLAREHALLVTVEENTLQGGAGSAVAECLARRGIV---VPML 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPD +++ G P   LA  GL  + IA ++
Sbjct: 577 HLGLPDAFLEQGDPVQMLADCGLDANGIARSI 608


>gi|237749331|ref|ZP_04579811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           OXCC13]
 gi|229380693|gb|EEO30784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           OXCC13]
          Length = 619

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 322/642 (50%), Positives = 425/642 (66%), Gaps = 30/642 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  +K L   +L  LADELR  +I +VS+TGGHL S+LG +EL +ALHY+F+ 
Sbjct: 3   LLNTINSPADLKRLQASQLPLLADELRDYIIQSVSRTGGHLSSNLGTVELAIALHYIFDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+Y HKILTGR+D+M+T+RQ +GLSGF KR ESE+D FGT HSSTSISA
Sbjct: 63  PDDRLIWDVGHQSYAHKILTGRKDRMNTLRQLNGLSGFPKRDESEFDSFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+   LKG     +AVIGDGA+T G A+EAMNN G Y D +M+VILNDN  +S+  
Sbjct: 123 ALGMALAAKLKGEDTYSIAVIGDGAITGGMAFEAMNNVGVYDDINMLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+S  +RL S +     + V K V   +  PM  +A K +E+A+ MI 
Sbjct: 181 -------PPVGALNSYFARLMSGKFYAAAKNVGKTV---LPAPMRHIARKFEEHAKSMI- 229

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            + +TLFEE G  YIGP+DGH+++ LV  L+ +K  K  GP  +H+VT+KG GY  AE  
Sbjct: 230 -APATLFEEFGFNYIGPIDGHDLEALVPTLQNLKERK--GPQFLHIVTKKGHGYKLAEAD 286

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG+ KF P  G +   +A+  +Y   F   L   A VDK ++ I  AM  G+G+  
Sbjct: 287 PILYHGLGKFCPEEGIKPVLAAKP-TYADIFGNWLCDMAAVDKKLIGITPAMKEGSGMVQ 345

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P R FDVGIAEQHAVTF+AGLACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 346 FAKDYPERFFDVGIAEQHAVTFSAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDV 405

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DR+GLVGADG TH G++D+ ++ C+PNMVVMAPS E E   M+ TA   +  P+  
Sbjct: 406 TFALDRSGLVGADGATHAGNYDMAYLRCIPNMVVMAPSSENEARQMLTTAYRYNG-PAAV 464

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG GIG+E  P  +   L +GKG IL +G+ +A+L +GT V   L+A   L++    
Sbjct: 465 RYPRGAGIGIE--PEKELTALPLGKGDILRKGKNIAILAFGTMVNPALSAGEELDA---- 518

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KP+D  LI  +AK+H  L+TVEEG+I GG GS V++ LA++ L   T    
Sbjct: 519 -TVVNMRFVKPIDKELICEMAKTHPCLVTVEEGTIHGGAGSAVMETLAEEKL---THPVL 574

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            L LPD++IDHG     LA   L    I A++    G+  ++
Sbjct: 575 LLGLPDKFIDHGDVGQLLAMHKLDKHGIMASIIERFGKIDDS 616


>gi|421503887|ref|ZP_15950832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           DLHK]
 gi|400345391|gb|EJO93756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           DLHK]
          Length = 631

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/652 (48%), Positives = 426/652 (65%), Gaps = 32/652 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD+ N P  ++ L+  +L+ LADELR  ++++V ++GGH G+ LGVIEL
Sbjct: 7   EIPRERPLTPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   LKG K   VAVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A KV
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKIISSRTYASMREGSKKILSRLPGAW-EIARKV 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+A+GM+     TLFEELG  Y+GP+DGH++  L+A L  +++    GP  +HVVT+KG
Sbjct: 237 EEHAKGML--VPGTLFEELGWNYVGPIDGHDLPILLATLRNMRDLD--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P T            Y+  F + L   A  D+ +V I  A
Sbjct: 293 KGFAPAEADPIGYHAITKLEPVTPSAVPRKPSGPKYSNVFGQWLCDMAAADQRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G+KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVAFAERFPERYFDVAIAEQHAVTLAAGMACDGVKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M+ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDENELRRMLTTGY 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
                P+  RYPRG+G    L  G +  PLE+GK  +  +G+  ALL +G  +     A 
Sbjct: 473 LFAG-PAAVRYPRGSGPNAPLDAGLE--PLEIGKAVVRRQGKGAALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL     L  TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA   
Sbjct: 525 ALQVGEALNATVVDMRFVKPLDEALLRELAGSHELLVTIEENAVMGGAGSAVSEFLAAQN 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           ++      +PL+   LPD Y++H  PA  LA+ GL  + I   V   L Q R
Sbjct: 585 II------KPLLHLGLPDYYVEHAKPAQMLAECGLDQAGIERAVRERLDQLR 630


>gi|297537808|ref|YP_003673577.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
 gi|297257155|gb|ADI29000.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
          Length = 627

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 307/641 (47%), Positives = 431/641 (67%), Gaps = 30/641 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+TI+ P+ ++ L  ++L  LA ELR  +I +V+KTGGHL S+LGV+ELT+ALHYVFN 
Sbjct: 9   ILNTIDSPLQLRQLERKQLVPLAQELRTFLINSVAKTGGHLSSNLGVVELTIALHYVFNT 68

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGRR++M ++R   G++GF +RSESEYD FGTGHSSTSISA
Sbjct: 69  PDDRLVWDVGHQTYPHKILTGRREQMQSLRNPQGIAGFPRRSESEYDTFGTGHSSTSISA 128

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV     G +   VA+IGDGAMTAG A+EA+NNAG +D++++VILNDN  +S+   
Sbjct: 129 ALGMAVAAQKAGLERRAVAIIGDGAMTAGMAFEALNNAGDMDANLLVILNDN-DMSISNN 187

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VGAL++ L++L S+R    +R+  K V   +   M E A + +E+ +GM+  
Sbjct: 188 --------VGALNNYLAKLLSSRFYGTVRKSGKKVLSAVPHVM-EFAKRAEEHVKGMV-- 236

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +  TLFEE G  YIGP+DGH++D L+  L  +K  K  GP  +H+VT+KG+G+  AE   
Sbjct: 237 TPGTLFEEFGFNYIGPIDGHDMDALIDTLSNIKQLK--GPQFLHIVTQKGKGFEPAEDNP 294

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           +K+HGV KFDP  G    S+ + ++YT  F E L+  A +D  ++ I  AM  G+GLN F
Sbjct: 295 NKFHGVGKFDPFNGDALTSNTK-KTYTQVFGEWLVDMAALDNRLIGITPAMCDGSGLNAF 353

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             ++P R +DVGIAEQH++TFAAG+AC+GLKP  AIYS+F+QRAYDQ++HD+ LQ LPV 
Sbjct: 354 AEKYPDRYYDVGIAEQHSLTFAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIALQNLPVL 413

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH GSFD++++ C+PN+V+MAPSDE E   M+ T    +   +  R
Sbjct: 414 FAIDRAGLVGADGPTHAGSFDLSYLRCIPNIVIMAPSDENECRQMLYTGFQYNG-VAAVR 472

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLES 610
           YPRG G GV +    + I  E+G   I         ++VA+L +G+ + +CL A   L++
Sbjct: 473 YPRGGGAGVVIQKKMQAI--EIGTAEIKRHVASNTKQKVAILSFGSMLNACLKAGEKLDA 530

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL-AQDGLLDG 668
                TV + RF KP+D  ++ +LA  H ++ITVEE S+ GG GS V++ L A       
Sbjct: 531 -----TVVNMRFVKPIDKIMLENLAIDHTLIITVEENSVMGGAGSAVLEALQAIQNPNKS 585

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            ++   L LPD++I+HG     LA+ GL    IA+T+  ++
Sbjct: 586 PIRTLCLGLPDKFIEHGVHETMLAECGLDAEGIASTIAKLI 626


>gi|398865852|ref|ZP_10621361.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM78]
 gi|398242301|gb|EJN27920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM78]
          Length = 632

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/658 (47%), Positives = 428/658 (65%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SH++L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAASHDLLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++ 
Sbjct: 585 NILKSVLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLNI 632


>gi|418062607|ref|ZP_12700377.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
 gi|373563851|gb|EHP90009.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
          Length = 515

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 307/521 (58%), Positives = 384/521 (73%), Gaps = 24/521 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 6   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 65

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 66  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 125

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 126 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 185

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 186 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 236

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 237 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 294

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 295 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 354

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 355 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 414

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 415 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 474

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 583
           T  A D  P   RYPRG G+G+ELP    G+PL +G+GR++
Sbjct: 475 TCHAHDSGPIALRYPRGEGVGIELP--ETGVPLAIGRGRVV 513


>gi|300703493|ref|YP_003745095.1| 1-deoxy-d-xylulose 5-phosphate synthase [Ralstonia solanacearum
           CFBP2957]
 gi|299071156|emb|CBJ42470.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia solanacearum CFBP2957]
          Length = 637

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 322/640 (50%), Positives = 427/640 (66%), Gaps = 33/640 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG IELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTIELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA G   +G     +AVIGDGAM+AG A+EAMNNAG Y +  ++V+LNDN  +S+  
Sbjct: 125 ALGMAQGAKTRGESRVAIAVIGDGAMSAGMAFEAMNNAGVYKNLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH++  LV  L+ ++       GP  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLGSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVA-KFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           AE    KYH  + +FDPA G    ++    SYT  F + L   A  DK +V I  AM  G
Sbjct: 291 AEADPVKYHAASGRFDPAVGFAKPATPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           +G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV L
Sbjct: 351 SGMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVAL 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D
Sbjct: 411 QNLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QD 469

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            P+  RYPRG G GV + P    +P+   EV +      G+RVA+L +G+ V    AA+ 
Sbjct: 470 CPTAVRYPRGAGPGVAVQPTLDPLPVGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAE 529

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGL 665
            L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+
Sbjct: 530 RLDA-----TVVNMRFVKPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGV 584

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               ++   L LPDR+IDHG  A  LA  GL  + I A++
Sbjct: 585 ATPVLQ---LGLPDRFIDHGDHAALLALCGLDANGILASI 621


>gi|395651510|ref|ZP_10439360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           extremaustralis 14-3 substr. 14-3b]
          Length = 631

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 311/641 (48%), Positives = 420/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ  G++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMSTLRQKGGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G     +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P         A    Y+  F E L   A  D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QRAYDQ+VH
Sbjct: 353 MKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLVH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRGNG    +       P+E+GKG +  +G + A L +G  +   L  +
Sbjct: 472 HLYNGPAAVRYPRGNGPNAVIE--KDLAPIEIGKGIVRRQGSKTAFLVFGVQLAEALKVA 529

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             +++     TV D RF KPLD AL+R +A  HE+L+TVEE +I GG G+ V +FLA++ 
Sbjct: 530 EKIDA-----TVVDMRFVKPLDEALVREIAARHELLVTVEENAIMGGAGAAVSEFLAREN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV 622


>gi|398874776|ref|ZP_10629976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM74]
 gi|398193999|gb|EJM81084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM74]
          Length = 632

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/658 (48%), Positives = 429/658 (65%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGKGIVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SH++L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHDLLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++ 
Sbjct: 585 NILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLNI 632


>gi|421139008|ref|ZP_15599054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BBc6R8]
 gi|404509731|gb|EKA23655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BBc6R8]
          Length = 632

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/642 (48%), Positives = 423/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPATPLLDRANTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAAPKKPSGPKYSGVFGEWLCDMASADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G  VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSGVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAGSHELLVTLEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  S I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDESGIEASV 623


>gi|71908674|ref|YP_286261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
           RCB]
 gi|118595510|sp|Q47BJ0.1|DXS_DECAR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71848295|gb|AAZ47791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
           RCB]
          Length = 618

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 327/631 (51%), Positives = 415/631 (65%), Gaps = 26/631 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  ++ L  ++L QLA ELRA +I +VSKTGGHL S+LG +ELT+ALH VFN 
Sbjct: 6   LLETINSPADLRRLDRKQLPQLASELRAFLIDSVSKTGGHLSSNLGTVELTIALHAVFNT 65

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ Y HK+LTGRR+ M T+R   G+SGF KR+ES YD FG GHSSTSISA
Sbjct: 66  PEDRLVWDVGHQCYAHKVLTGRREGMSTLRMHGGVSGFPKRAESPYDTFGVGHSSTSISA 125

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    KG     +A+IGDGAM+AG A+EAMNNAG  D+DM+VILNDN ++S+   
Sbjct: 126 ALGMALAAKHKGEDRKAIAIIGDGAMSAGMAFEAMNNAGVADADMLVILNDN-EMSIS-- 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL++ L+RL S++     RE  + +      P+ ELA + +E+ +GMI  
Sbjct: 183 ------PPVGALNNILTRLTSSKTYNVAREAGRHMLG-FAPPLLELARRAEEHVKGMI-- 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +  TLFEE G +Y GP+DGH++D L+  LE +K  K  GP  +HV+T+KG+GY  AE   
Sbjct: 234 APGTLFEEFGFHYYGPIDGHDLDALIPTLENLKKLK--GPKFLHVITKKGQGYKLAENDP 291

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHGV KF    G Q        +YT  F + L   A+ D  +V I  AM  G+G+  F
Sbjct: 292 ILYHGVGKFAACDGIQSAKGPAKLTYTQVFGDWLCDMAKADSRLVGITPAMREGSGMVRF 351

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
                 R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QR YDQ+VHDV LQ LPV 
Sbjct: 352 SAEHADRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRGYDQLVHDVALQNLPVI 411

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DR GLVGADGPTH G+FD++F+ C+PNM VMAP+DEAE   M++TA  ID  PS  R
Sbjct: 412 FAVDRGGLVGADGPTHHGTFDLSFVTCIPNMTVMAPADEAECRKMLSTAMTIDG-PSMVR 470

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG+G G    P  K   L VGKG I   G+ +ALL +G+     L A+A+     L  
Sbjct: 471 YPRGSGTGT--IPEAKLDTLPVGKGDIRRRGKDIALLAFGS-----LVAAAVAAGEELDA 523

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRP 674
           TVA+ RF KPLD  LI  LA +H +L+++EE + IGG GS + + LA+ GL    V    
Sbjct: 524 TVANMRFIKPLDADLIVELAGNHSLLVSIEENAVIGGAGSEIERVLAERGL---QVPVLR 580

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPDR+IDHG     LA+ GL    I   V
Sbjct: 581 LGLPDRFIDHGEQGQLLAELGLDKEGIVRAV 611


>gi|330505138|ref|YP_004382007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           NK-01]
 gi|328919424|gb|AEB60255.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           NK-01]
          Length = 631

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/641 (49%), Positives = 420/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD+ N P  ++ L+  +L+ LADELR  ++++V ++GGH G+ LGVIEL
Sbjct: 7   EIPRERPLTPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   LKG K   VAVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVGANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A KV
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKIISSRTYASMREGSKKILSRLPGAW-EIARKV 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+A+GM+     TLFEELG  Y+GP+DGH++  L+A L  +++    GP  +HVVT+KG
Sbjct: 237 EEHAKGML--VPGTLFEELGWNYVGPIDGHDLPTLLATLRNMRDLD--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P T            Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEADPIGYHAITKLEPVTPVAAPKKPSGPKYSNVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M+ T  
Sbjct: 413 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRMLTTGH 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    L  G +  PLE+GK  +  +G+ VALL +G  +   L   
Sbjct: 473 LFDG-PAAVRYPRGSGPNAPLDAGLE--PLEIGKAVVRRQGKGVALLAFGVQLAEALRVG 529

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     TV D RF KPLD AL+R LA SHE+L+T+EE SI GG GS V +F A + 
Sbjct: 530 ETLDA-----TVVDMRFVKPLDEALLRELAGSHELLVTLEENSIMGGAGSAVSEFFAAE- 583

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             +  V    L LPD Y++H  P+  LA+ GL  + I A V
Sbjct: 584 --NRQVPMLHLGLPDYYVEHAKPSQMLAECGLDEAGIEAAV 622


>gi|398942445|ref|ZP_10670287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp.
           GM41(2012)]
 gi|398160625|gb|EJM48890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp.
           GM41(2012)]
          Length = 632

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/658 (48%), Positives = 427/658 (64%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAASDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLTTG 472

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
              +  P+  RYPRG+G    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 473 HLFNG-PAAVRYPRGSGPNATIEKNLE--PIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V       RE L++++ 
Sbjct: 585 NILKSMLH---LGLPDSYVEHAKPAQMLAECGLDEAGIEASV-------RERLQLLNI 632


>gi|311105030|ref|YP_003977883.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           A8]
 gi|310759719|gb|ADP15168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           A8]
          Length = 620

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 324/634 (51%), Positives = 420/634 (66%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  +K L  RELK+LADELR  V+ +VSKTGGHL S+LG +ELT+ALH VF
Sbjct: 3   TDLLDRIQSPADLKRLDRRELKRLADELRGFVLESVSKTGGHLSSNLGTVELTLALHQVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMAKLRQQGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +A+IGDGAM+AG A+EAMNNAG   + +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAIIGDGAMSAGMAFEAMNNAGVTPNINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNVGRAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT+KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLKALE--GLQFLHVVTKKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +S+T  F + L   AE D  +VAI  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQSKAPGKRSFTQVFGQWLCDMAEQDSRLVAITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAG+ACEG KP  AIYS+FMQR YDQ +HDV LQ L
Sbjct: 349 VEFEQRFPLRYFDVGIAEQHAVTFAAGIACEGQKPVVAIYSTFMQRGYDQFIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ F+ C+PNMVV  PSDE E   +++T       P+
Sbjct: 409 DVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVVATPSDENETRLLLSTCYQ-HPGPA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G    PG   +  E+G+G +  EG ++A+LG+G  +Q+ L A+  L++  
Sbjct: 468 SVRYPRGAGCGAAEAPGLDTV--ELGRGVVRREGRKIAILGFGMLLQAALGAAEKLDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KP+D  LI  LA  H+ L+T+E+ SI GG GS V++ L+  G+   T+ 
Sbjct: 524 ---TVADMRFVKPIDRELILDLASRHDALVTLEDASIMGGAGSAVLETLSAAGI---TIP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD +IDHG  +   A  GL  + I +++
Sbjct: 578 VLQLGLPDEFIDHGEQSALWAGIGLDATGIESSI 611


>gi|443468786|ref|ZP_21058993.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas
           pseudoalcaligenes KF707]
 gi|442898005|gb|ELS24822.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas
           pseudoalcaligenes KF707]
          Length = 631

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/652 (48%), Positives = 427/652 (65%), Gaps = 31/652 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL  LADELR  +++ V KTGGH G+ LGV+EL
Sbjct: 7   EIPRERPVTPLLDRATTPDQLRRLGEAELDTLADELRQYLLYTVGKTGGHFGAGLGVVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVYDTPDDRLVWDVGHQAYPHKILTGRREQMATLRQKDGVAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   ++G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARMQGSERKSIAVIGDGALTAGMAFEALNHASDVQADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEADPIGYHAITKLEPIKAPATPKKPSGPKYSNVFGQWLCDMAGQDPRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVAFAERFPDRYFDVAIAEQHAVTLAAGMACDGAKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRLLLTTGH 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             +  P+  RYPRG+G    + P  K +  E+GKG +  +G +VALL +G  +     A 
Sbjct: 473 HFEG-PAAVRYPRGSGPNSPIDPELKTV--EIGKGVVRRQGSKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL  ++GL  TV D RF KPLD AL+R LA SHE+L+TVEE S+ GG G+ V +FLA++ 
Sbjct: 525 ALQVADGLDATVVDMRFVKPLDEALVRELAGSHELLVTVEENSVMGGAGAAVSEFLAREN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           LL   +    L LPD Y++H  PA+ LA+ GL  + + A+V     +TR AL
Sbjct: 585 LLKPILH---LGLPDYYVEHAKPAEMLAECGLDAAGVEASV-----RTRMAL 628


>gi|398886803|ref|ZP_10641657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM60]
 gi|398187958|gb|EJM75281.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM60]
          Length = 632

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/657 (47%), Positives = 428/657 (65%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAATDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNATIEKDLQ--PIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD  L+R +A +HE+L+T+EE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEELVREIAGNHELLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++
Sbjct: 585 NILKSVLH---LGLPDLYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLA 631


>gi|398803632|ref|ZP_10562650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. CF318]
 gi|398095885|gb|EJL86216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. CF318]
          Length = 635

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 324/635 (51%), Positives = 418/635 (65%), Gaps = 27/635 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+TI  P  ++ L    LK LADELRA V+ +VS+TGGHL S+LG +ELTVALHYVFN
Sbjct: 3   PLLETIQSPADLRKLPRNGLKPLADELRAFVLDSVSQTGGHLSSNLGTVELTVALHYVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRR++M ++RQ  GLSGF +R ESEYD FGT HSSTSIS
Sbjct: 63  TPEDRLVWDVGHQTYPHKILTGRRERMGSLRQFGGLSGFPRRDESEYDTFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLP 253
           A LGMA+    KG   + VA+IGDGAM+AG A+EA+NNAG  D   ++V+LNDN  +S+ 
Sbjct: 123 AALGMALAAQQKGEDRHAVAIIGDGAMSAGMAFEALNNAGVHDHCKLLVVLNDN-DMSIS 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   PPVGAL+  L++L S R     + V K V + +  P+ ELA +++ +A+GM+
Sbjct: 182 --------PPVGALNRYLAQLMSGRFYASAKHVGKQVLR-VAPPLLELAKRLEAHAKGMV 232

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN--TKTTGPVLIHVVTEKGRGYPYA 371
               +TLFE  G  YIGP+DGH+++ LV  LE +K+      GP  +HVVT+KG+GY  A
Sbjct: 233 --VPATLFENFGFNYIGPIDGHDLESLVPTLENIKHLMDNNGGPQFLHVVTKKGQGYKLA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E     YHG  KFDPA G Q  S+   Q++T  F + L   AE D  +V I  AM  G+G
Sbjct: 291 EADPIAYHGPGKFDPAMGLQKSSAPAKQTFTQVFGQWLCDMAEHDARLVGITPAMREGSG 350

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           +  F +RFP R  DVGIAEQHAVTFAAG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ 
Sbjct: 351 MVEFHKRFPGRYHDVGIAEQHAVTFAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQN 410

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM V  P+DE E   ++++A    D P
Sbjct: 411 LPVVFALDRAGLVGADGATHAGAYDIPYLRCIPNMSVACPADERECRKLLSSAFE-QDHP 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G GVE   G +  PL  GKG I  EG  VA+L +GT +   L A+  L + 
Sbjct: 470 VAVRYPRGAGAGVEPEAGLE--PLPFGKGEIRREGAGVAILAFGTLLYPALQAAEKLGA- 526

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               TV + R+ KPLD  L+  +A  HE L+TVEEG+I GG GS V + L   G+    +
Sbjct: 527 ----TVVNMRWAKPLDTELLLKVAAGHEALVTVEEGAIMGGAGSAVSEALQAAGINKPVL 582

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               L L D +I+HG PA  LA  GL  + I A +
Sbjct: 583 H---LGLQDEFIEHGDPAKLLALQGLDAAGIEAAI 614


>gi|398977332|ref|ZP_10687049.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM25]
 gi|398138076|gb|EJM27106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM25]
          Length = 632

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/657 (48%), Positives = 425/657 (64%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMESLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGTGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQMAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KP+D AL+R +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPMDEALVREIANSHELLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL    I A V       RE LE++S
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEVGIEAAV-------RERLELLS 631


>gi|388547623|ref|ZP_10150885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M47T1]
 gi|388274223|gb|EIK93823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M47T1]
          Length = 632

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/645 (48%), Positives = 420/645 (65%), Gaps = 26/645 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPLTPLLDRADTPAGLRRLGEAELETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSGRKSIAVIGDGALTAGMAFEALNHAPEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P         A    Y+  F + L   A  D+ +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAPKKASGPKYSAVFGQWLCDMAAADQRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G    +    +   LE+GKG I  EG + ALL +G  +     A 
Sbjct: 472 HLHEGPAAVRYPRGTGPNAAIDSSLEA--LEIGKGVIRREGSKAALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL  +  L  TV D RF KPLD  L+R +A  HE+L+T+EE SI GG G+ V +FLA++ 
Sbjct: 525 ALKVAEKLDATVVDMRFVKPLDETLVRDIAARHELLVTIEENSIMGGAGAAVSEFLAREN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           LL   +    L LPD Y++H  PA  LA+ GL  + I A +   L
Sbjct: 585 LLKPVLH---LGLPDTYVEHAKPAQMLAECGLDEAGIEAAIVKRL 626


>gi|146308858|ref|YP_001189323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina ymp]
 gi|166201529|sp|A4XZ25.1|DXS_PSEMY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145577059|gb|ABP86591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina ymp]
          Length = 631

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/652 (48%), Positives = 425/652 (65%), Gaps = 32/652 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD+ N P  ++ L+  +L+ LADELR  ++++V ++GGH G+ LGVIEL
Sbjct: 7   EIPRERPLTPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   LKG K   VAVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVGANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A KV
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKIISSRTYASMREGSKKILSRLPGAW-EIARKV 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+A+GM+     TLFEELG  Y+GP+DGH++  L+A L  +++    GP  +HVVT+KG
Sbjct: 237 EEHAKGML--VPGTLFEELGWNYVGPIDGHDLPTLLATLRNMRDLD--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P T            Y+  F + L   A  D+ +V I  A
Sbjct: 293 KGFAPAEADPIGYHAITKLEPVTPSAVPRKPSGPKYSNVFGQWLCDMAAADQRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G+KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVAFAERFPERYFDVAIAEQHAVTLAAGMACDGVKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M+ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDENELRRMLTTGY 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    L  G +   LE+GK  +  +G+  ALL +G  +     A 
Sbjct: 473 LFDG-PAAVRYPRGSGPNAPLDAGLE--LLEIGKAIVRRQGKGAALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL     L  TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA   
Sbjct: 525 ALQVGEALNATVVDMRFVKPLDEALLRELAGSHELLVTIEENAVMGGAGSAVSEFLAAQN 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           ++      +PL+   LPD Y++H  PA  LA+ GL  + I   V   L Q R
Sbjct: 585 II------KPLLHLGLPDYYVEHAKPAQMLAECGLDQAGIERAVRERLDQLR 630


>gi|398858336|ref|ZP_10614028.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM79]
 gi|398239648|gb|EJN25355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM79]
          Length = 632

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/642 (49%), Positives = 420/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A VD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGPKYSGVFGEWLCDMAAVDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G     P      P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGTGPNA--PIAKDLEPIEIGKGVVRRQGNKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L++VEE +I GG G  V +FLA++
Sbjct: 530 AEKLDA-----TVVDMRFVKPLDEALVREIAGSHELLVSVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I   V
Sbjct: 585 NILKSVLH---LGLPDTYVEHAKPAQMLAECGLDEAGIEEAV 623


>gi|395498974|ref|ZP_10430553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. PAMC
           25886]
          Length = 632

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/642 (48%), Positives = 423/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPATPLLDRANTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAAPKKPSGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G  VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSGVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|398983679|ref|ZP_10690143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM24]
 gi|399012338|ref|ZP_10714662.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM16]
 gi|398115900|gb|EJM05673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM16]
 gi|398156851|gb|EJM45263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM24]
          Length = 632

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 311/643 (48%), Positives = 424/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMESLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A VD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSAVFGEWLCDMAAVDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLA 603
             + + P+  RYPRGNG    +    K + P+E+GKG +  +G +VALL +G  +   L 
Sbjct: 472 GHLYNGPAAVRYPRGNGPNATI---EKDLDPIEIGKGILRRQGSKVALLVFGVQLAEALK 528

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +  L++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G  V +FLA+
Sbjct: 529 VAEKLDA-----TVVDMRFVKPLDEALVREIADSHELLVTIEENAIMGGAGGAVSEFLAR 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + +L   +    L LPD Y++H  PA  LA+ GL  + I A++
Sbjct: 584 ENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI 623


>gi|348617927|ref|ZP_08884461.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Candidatus Glomeribacter gigasporarum BEG34]
 gi|347816871|emb|CCD29115.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Candidatus Glomeribacter gigasporarum BEG34]
          Length = 636

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 325/646 (50%), Positives = 426/646 (65%), Gaps = 41/646 (6%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TI+ P  +++L  R LKQLADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN
Sbjct: 5   PLLKTIDDPAALRSLDRRALKQLADELRAFVLESVSRTGGHLSSNLGTVELTIALHYVFN 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQTYPHKILTGRR  M T+RQ  GLSGF +R ESEYD FGT HSSTSIS
Sbjct: 65  TPHDRIVWDVGHQTYPHKILTGRRAAMATLRQQGGLSGFPRRCESEYDAFGTAHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLP 253
           A LGMA+   LK      +AVIGDGAM+AG A+EAMN+AG  D   +IV+LNDN  +S+ 
Sbjct: 125 AALGMALASRLKDESRFCIAVIGDGAMSAGMAFEAMNHAGVCDDLPLIVVLNDN-DMSIS 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   P VGAL+  L+RL S R     ++  + V + +  P+ E A + +E+A+GM+
Sbjct: 184 --------PAVGALNRYLARLMSGRFYAAAKKGVETVLR-VAPPVLEFARRFEEHAKGMV 234

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
               +TLFE LG  YIGP+DGH++D L+  L  +K  K  GP  +HVVT+KG+GY  AE 
Sbjct: 235 --VPATLFEALGFNYIGPIDGHDLDSLIPTLNNLKALK--GPQFLHVVTKKGQGYKLAEA 290

Query: 374 AADKYHGVAKFDPATGKQFKSSART---QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
               YH   +F+P  G Q KS+ R+   ++YT  F E L   A  D  +V I  AM  G+
Sbjct: 291 DPVLYHAPGQFNPLDGVQPKSARRSAARKTYTQVFGEWLCEAAARDARIVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F RRFP R +DVGIAEQHA+T A GLA EGLKP  AIYS+F+QRAYDQ++HD+ LQ
Sbjct: 351 GLVEFERRFPERYYDVGIAEQHALTLAGGLAVEGLKPVVAIYSTFLQRAYDQLIHDIALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           KLPV FA+DRAG+VGADG TH G++D+ F+ C+PN+ VMA SDE E + M+ TAA ++  
Sbjct: 411 KLPVVFAIDRAGVVGADGATHMGAYDLAFLRCIPNLTVMAASDENECWQMLNTAAQLNG- 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           P+  RYPRG+G G  +    + +P  +G+G +  E     G+R+A+L +GT V     A 
Sbjct: 470 PAAVRYPRGSGPGAPVFKHARALP--IGRGEMRRESAQPCGQRIAILAFGTMV-----AQ 522

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           +L+ +  L  +VA+ RF KPLD  L+  LA++H+ L+TVEEG + GG GS  ++ L   G
Sbjct: 523 SLIAAEQLDASVANMRFVKPLDQTLVVQLAQTHDALVTVEEGCVMGGAGSACIESLLAHG 582

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
           +       RP++   L DR+IDHG PA  L   GL    IA  + N
Sbjct: 583 I------ERPMLQLGLSDRFIDHGDPARLLTDHGLDGEGIAQAIQN 622


>gi|300690861|ref|YP_003751856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum
           PSI07]
 gi|299077921|emb|CBJ50560.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia solanacearum PSI07]
          Length = 636

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 322/641 (50%), Positives = 426/641 (66%), Gaps = 36/641 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR +M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRRGQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G     +AVIGDGAM+AG A+EAMNNAG Y +  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH+++ LV  L+ ++     G  P  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +  +     SYT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPAARPSKISYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHA TFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPDRYYDVGIAEQHAATFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI-----LIEGERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G GV +    +  PL VGK  +        G+RVA+L +G+ V    AA+
Sbjct: 470 PTAVRYPRGAGPGVAVQATLE--PLPVGKAEVRRVSTAPAGQRVAILAFGSMVAPATAAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     TV + RF KPLD A +  +A+SH+ ++TVEEG + GG GS  ++ LA  G
Sbjct: 528 ERLDA-----TVVNMRFVKPLDVACVLEMARSHDYVVTVEEGCVMGGAGSACLEALAAAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +    ++   L LPDR++DHG  A  LAQ GL  + I A+V
Sbjct: 583 VATPVLQ---LGLPDRFVDHGDHAALLAQCGLDANGILASV 620


>gi|241663624|ref|YP_002981984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12D]
 gi|240865651|gb|ACS63312.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12D]
          Length = 636

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 318/639 (49%), Positives = 425/639 (66%), Gaps = 32/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDDPADLRRLDRRQLGPLADELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQ+YPHKILTGRRD+M ++RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PEDRIVWDVGHQSYPHKILTGRRDQMGSLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G    G     +AVIGDGAM+AG A+EAMNNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTNGEDRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+ +GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHTKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN--TKTTGPVLIHVVTEKGRGYPY 370
                +T+FEE G  YIGP+DGH+++ LV  L+ ++    +  GP  +HVVT+KG+GY  
Sbjct: 233 F--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +        +YT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPSGRPAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM P+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPADENECRQLLSTAFA-QDG 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           P+  RYPRG G GV + P  + +P+   EV +      G+RVA+L +G+ V    AA+  
Sbjct: 470 PTAVRYPRGAGTGVAVQPTLEPLPVGKAEVRRASTAPAGQRVAILAFGSMVAPASAAAER 529

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+ 
Sbjct: 530 LDA-----TVVNMRFVKPLDVACVLEMARTHDYVVTVEEGCVMGGAGSACLEALACAGVA 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR++DHG  A  LAQ GL  + I A +
Sbjct: 585 TPVLQ---LGLPDRFVDHGDHAALLAQCGLDANGILACI 620


>gi|402698240|ref|ZP_10846219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fragi A22]
          Length = 632

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/642 (48%), Positives = 427/642 (66%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L+  EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRAGTPAGLRRLAEAELEPLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMATLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P    +    A +   Y+  F E L   A VD+ +V I  
Sbjct: 293 KGFAPAEADPIGYHAITKLEPLDAPKAAPKAASGPKYSAVFGEWLCDMAAVDQRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLIAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG+G    +    +  PLE+GKG I  +G +VA+L +G  +     A
Sbjct: 472 GHLYNGPAAVRYPRGSGPNASIEKTLE--PLEIGKGVIRRKGSKVAMLVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL  +  +  TV D RF KP+D AL+R +A SHE+L+T+EE +I GG G+ V + LA++
Sbjct: 525 EALQVAEKIDATVVDMRFVKPMDEALVREMADSHELLVTIEENAIMGGAGAAVSELLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  P+  LA+ GL  + I A+V
Sbjct: 585 NVLKSVLH---LGLPDVYVEHAKPSQMLAECGLDAAGIEASV 623


>gi|398807912|ref|ZP_10566782.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax sp. CF313]
 gi|398088543|gb|EJL79101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax sp. CF313]
          Length = 618

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 312/632 (49%), Positives = 423/632 (66%), Gaps = 26/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL T++ P  ++     +L+QL+DE+RA V+ NVS+TGGHL S+LG +ELTVALH+VFN
Sbjct: 3   PLLPTLHDPSPIRKYDRAQLRQLSDEVRACVLDNVSRTGGHLSSNLGTVELTVALHHVFN 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTYPHKILTGRR++M T+RQ  G+SGF +R+ESEYD FGT HSSTSIS
Sbjct: 63  TPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRTESEYDTFGTAHSSTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG   + VA+IGDGA+TAG A+EA+NNAG  D  ++VILNDN  +S+  
Sbjct: 123 AALGMAMAAKQKGEDRHAVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S       + V K V +    P+ ELA +++++A+GM+ 
Sbjct: 181 -------PPVGALNRYLAQLMSGNFYAAAKSVGKSVLRN-APPLFELAKRLEQHAKGMV- 231

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  Y+GP+DGH++D LV  LE +K+ +  GP  +HVVT+KG+GY  AE  
Sbjct: 232 -VPATLFEQFGFNYVGPIDGHDLDSLVPTLENLKHLE--GPQFLHVVTKKGQGYKLAEAD 288

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP  G    ++   Q++T  F + L   A  D  +V I  AM  G+GL  
Sbjct: 289 PVAYHGPGKFDPQVGLVKSAAVVKQTFTQVFGQWLCDTAAADGRLVGITPAMREGSGLVE 348

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 349 FEKRFPDRYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 408

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++ T+A   + P   
Sbjct: 409 VFALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERECRQLL-TSAYEQNHPVAV 467

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G       + +P   GKG I  EG R+A+L +GT +   LAA+  L++    
Sbjct: 468 RYPRGAGAGAAPHLTLEALPF--GKGEIRREGRRIAILAFGTLLYPALAAAEPLDA---- 521

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + R+ KPLD  L+  +A +H+ ++T+EEG ++GG GS V++ L    +    ++  
Sbjct: 522 -TVVNMRWAKPLDVELLLKVAGTHDAIVTLEEGATMGGAGSAVLEALQAANIQKPVLQ-- 578

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPDR+I+HG PA  LA  GL    I A++
Sbjct: 579 -LGLPDRFIEHGDPAKLLASIGLDAPGIEASI 609


>gi|187929505|ref|YP_001899992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12J]
 gi|309781718|ref|ZP_07676451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA]
 gi|404396620|ref|ZP_10988414.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_2_56FAA]
 gi|229836074|sp|B2U930.1|DXS_RALPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|187726395|gb|ACD27560.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12J]
 gi|308919359|gb|EFP65023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA]
 gi|348610583|gb|EGY60271.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_2_56FAA]
          Length = 636

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 317/639 (49%), Positives = 425/639 (66%), Gaps = 32/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LA+ELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDDPADLRRLDRRQLGPLANELRAFVLDSVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQ+YPHKILTGRRD+M ++RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PEDRIVWDVGHQSYPHKILTGRRDQMGSLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   KG     +AVIGDGAM+AG A+EAMNNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTKGEDRVAIAVIGDGAMSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+ +GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHTKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTT--GPVLIHVVTEKGRGYPY 370
                +T+FEE G  YIGP+DGH+++ LV  L+ ++       GP  +HVVT+KG+GY  
Sbjct: 233 F--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +        +YT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPSGRPAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM P+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPADENECRQLLSTAFA-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           P+  RYPRG G GV + P  + +P+   EV +      G+RVA+L +G+ V    AA+  
Sbjct: 470 PTAVRYPRGAGTGVTVQPTLEPLPVGKAEVRRTSTAPAGQRVAILAFGSMVAPASAAAER 529

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + RF KPLD A +  +A++H+ ++T EEG + GG GS  ++ LA  G+ 
Sbjct: 530 LDA-----TVVNMRFVKPLDVACVLEMARTHDFVVTAEEGCVMGGAGSACLEALAAAGVA 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR++DHG  A  LAQ GL  + I A++
Sbjct: 585 TPVLQ---LGLPDRFVDHGDHAALLAQCGLDANGILASI 620


>gi|398901781|ref|ZP_10650572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM50]
 gi|398179392|gb|EJM67004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM50]
          Length = 632

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/633 (49%), Positives = 417/633 (65%), Gaps = 27/633 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A VD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGPKYSGVFGEWLCDMAAVDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + D P+  RYPRG G     P      P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYDGPAAVRYPRGTGPNA--PIAKDLEPIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA++
Sbjct: 530 AEKLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
            +L   +    L LPD Y++H  PA  LA+ GL
Sbjct: 585 NILKSVLH---LGLPDAYVEHAKPAQMLAECGL 614


>gi|229592838|ref|YP_002874957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SBW25]
 gi|259645387|sp|C3K2R1.1|DXS_PSEFS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229364704|emb|CAY52664.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SBW25]
          Length = 632

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 310/642 (48%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P+ ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAVTPVGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMGTLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G     +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K DP           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLDPLNAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G + A L +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSKTAFLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A  HE+L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAGGHELLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|359798546|ref|ZP_09301117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter
           arsenitoxydans SY8]
 gi|359363368|gb|EHK65094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter
           arsenitoxydans SY8]
          Length = 620

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 325/635 (51%), Positives = 423/635 (66%), Gaps = 29/635 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  +K L  RELK+LADELR  V+ +VS+TGGHL S+LG +ELT+ALH VF
Sbjct: 3   TDLLDRIQSPADLKRLDRRELKKLADELRGFVLESVSRTGGHLSSNLGTVELTLALHQVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMAKLRQQGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   + +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNVGRAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLKALE--GLQFLHVVTRKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F + L   A+ DK +VA+  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQSKAPGKRTFTQVFGKWLCDTAQQDKRLVAVTPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAG+ACEG KP  AIYS+FMQR YDQ +HDV LQ L
Sbjct: 349 VEFEQRFPQRYFDVGIAEQHAVTFAAGVACEGQKPVVAIYSTFMQRGYDQFIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAG+VGADG TH G++D+ F+ C+PNMVV  PSDE E   +++T       P+
Sbjct: 409 DVTFALDRAGIVGADGATHAGNYDIAFLRCVPNMVVATPSDENETRLLLSTCYQYPG-PA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIP-LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             RYPRG G G    P + G+  +E+GKG I  EG+++A+LG+GT VQ+ LAA+  L++ 
Sbjct: 468 SVRYPRGAGCGA---PESDGLDVVELGKGVIRREGKKIAILGFGTLVQAALAAAGKLDA- 523

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               TVAD RF KP+D  LI  LA  H+ ++TVE+  I GG GS V++ L+  G+    +
Sbjct: 524 ----TVADMRFVKPIDRELILDLAGRHDAIVTVEDACIMGGAGSAVLETLSAAGV---QI 576

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               L LPD +IDHG  +  LA  GL  + I  ++
Sbjct: 577 PVLQLGLPDEFIDHGEQSALLAGLGLDAAGIEQSI 611


>gi|337286893|ref|YP_004626366.1| deoxyxylulose-5-phosphate synthase [Thermodesulfatator indicus DSM
           15286]
 gi|335359721|gb|AEH45402.1| deoxyxylulose-5-phosphate synthase [Thermodesulfatator indicus DSM
           15286]
          Length = 634

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 320/648 (49%), Positives = 421/648 (64%), Gaps = 21/648 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ +N P  +K   +R+L++L +ELR  ++  V++TGGHL  +LGVIELTVALHYVF++
Sbjct: 4   LLEKVNSPADLKKFRLRQLEKLTEELREVIVKTVAETGGHLAPNLGVIELTVALHYVFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+I+WDVGHQ Y HK+LTGRRDK HT+RQ  G++GF KRSES +D    GHSSTSISA
Sbjct: 64  PKDKIVWDVGHQAYAHKLLTGRRDKFHTLRQYGGIAGFPKRSESPHDIVDVGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+   +D   ++  VV VIGDG+MTAG A+E +NNAG+L  D+IVILNDN ++S+   
Sbjct: 124 ALGLVTAQDFLKQEGKVVVVIGDGSMTAGLAFEGLNNAGHLKKDLIVILNDN-EMSIS-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLREL-REVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                 P VGALSS LSR  +    R L RE+   V+   GG     A +  E A   + 
Sbjct: 181 ------PNVGALSSFLSRKLTGPVARRLKRELESFVSHLPGGEHLVTAIRKSEDAIKCLL 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
             G  LFE LG  Y+GP+ GHN++ L+  L  VKN +  GP L+HV+T+KG+GY  AE+ 
Sbjct: 235 TPG-MLFEALGFRYVGPIPGHNLETLIDTLRNVKNLE--GPTLVHVLTKKGKGYRPAEEE 291

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
            +K+HG+  FD  TGK   S  +  SYT+ F++ ++   E++  +VAI AAM  GTGL  
Sbjct: 292 PEKFHGLGPFDIKTGKPKTSKNKPPSYTSVFSKTMVRLGEMEPRLVAITAAMPSGTGLKA 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP R FDVGIAEQHAVTFAAGLA  G+ P CAIYS+F+QRA+DQ++HDV L  L V
Sbjct: 352 FSERFPERFFDVGIAEQHAVTFAAGLALGGMIPVCAIYSTFLQRAFDQIIHDVALTNLHV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VG DGPTH G FD+T++  +PNM+VMAP DE EL HM+ TA      P   
Sbjct: 412 VFAIDRAGIVGEDGPTHQGQFDLTYLRLIPNMIVMAPKDENELQHMLYTAVKCQG-PVAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  L    K IP  +GKG I  EGE + L+  G  V   L A+ LL   GL 
Sbjct: 471 RYPRGAGEGASLDWELKEIP--IGKGEIFREGEDILLVAIGNMVYPALKAADLLAKEGLS 528

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV +ARF KPLD  LI   A     ++T+EE + +GGFGS V++   Q GL       +
Sbjct: 529 ATVINARFVKPLDEDLITEWALRTGRVVTIEENTLLGGFGSAVLELFQQKGL---RFPVK 585

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN-ILGQTREALEIMS 720
            + LPD++I+HG+PA    + GLTP  IA  V + +L Q R  + +++
Sbjct: 586 RIGLPDKFIEHGAPALLREKYGLTPEKIAEEVKDWLLHQERPDIRVLT 633


>gi|77461228|ref|YP_350735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Pf0-1]
 gi|119368202|sp|Q3K660.1|DXS_PSEPF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77385231|gb|ABA76744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Pf0-1]
          Length = 632

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/657 (47%), Positives = 425/657 (64%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMETLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGTGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQMAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KP+D AL+R +A SH++L+T+EE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPMDEALVREIANSHDLLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL    I A V       RE LE+++
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEVGIEAAV-------RERLELLN 631


>gi|344167297|emb|CCA79505.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [blood disease bacterium R229]
          Length = 636

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 321/641 (50%), Positives = 425/641 (66%), Gaps = 36/641 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDDPAELRRLDRRQLGTLADELRAFVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR +M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRRGQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G     +AVIGDGAM+AG A+EAMNNAG Y +  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH+++ LV  L+ ++     G  P  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +  +     SYT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPAARPSKISYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHA TFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPDRYYDVGIAEQHAATFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM P+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMVPADENECRQLLSTAFA-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI-----LIEGERVALLGYGTAVQSCLAAS 605
           P+  RYPRG G GV +    +  PL VGK  +        G+RVA+L +G+ V    AA+
Sbjct: 470 PTAVRYPRGAGPGVAVQATLE--PLPVGKAEVRRVSTAPAGQRVAILAFGSMVAPATAAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     TV + RF KPLD A +  +A+SH+ ++TVEEG + GG GS  ++ LA  G
Sbjct: 528 ERLDA-----TVVNMRFVKPLDAACVLEMARSHDYVVTVEEGCVMGGAGSACLEALAAAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +    ++   L LPDR++DHG  A  LAQ GL  + I A+V
Sbjct: 583 VATPVLQ---LGLPDRFVDHGDHAALLAQCGLDANGILASV 620


>gi|409397082|ref|ZP_11248025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Chol1]
 gi|409118584|gb|EKM94983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Chol1]
          Length = 632

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 310/649 (47%), Positives = 418/649 (64%), Gaps = 32/649 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL +LA+ELR D++F+V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELDELANELRQDLLFSVGQTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DGL+ F +RSESEYD FG GHSS
Sbjct: 72  YVFDTPDDRLVWDVGHQAYPHKILTGRRQRMSTLRQKDGLAAFPRRSESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSI A LGMA+   LKG K   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSIGAALGMAIAARLKGEKRKAIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG +S+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGMSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPAKPKQPSGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+  R FDV IAEQHAVT AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYADRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M++M PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLIMTPSDENEMRRMLTTGYLFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + PG    PLE+GKG +  +G+RVALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNATIEPGLA--PLEIGKGVVRRQGKRVALLVFGVQLPEALQVGETLDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA  HE L+T+EE S+ GG GS V +FLA + ++   
Sbjct: 535 -----TVVDMRFVKPLDEALLRRLAAEHEFLVTIEENSVMGGAGSAVAEFLAAEAVV--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
               PL+   LPD Y++H  P + LA+ GL  + I A V   L    EA
Sbjct: 587 ---MPLLHLGLPDSYVEHAKPNEMLAECGLDAAGIEAAVRQRLAALGEA 632


>gi|255658172|ref|ZP_05403581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM
           20544]
 gi|260849480|gb|EEX69487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM
           20544]
          Length = 629

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 320/642 (49%), Positives = 430/642 (66%), Gaps = 37/642 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ I  P  +K L++REL+QLA ELR  +I  VS+ GGHL  +LG +ELT+AL+ VF+
Sbjct: 3   PLLNRIENPEDVKKLTVRELEQLASELRHFIIDTVSQNGGHLAPNLGTVELTLALYSVFD 62

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ Y HKILTGRRD   T+R+  G++GF  R ES YD FG GH+STSIS
Sbjct: 63  FPADKLVWDVGHQAYSHKILTGRRDAFSTLRKKGGITGFPNRFESAYDAFGVGHASTSIS 122

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+ RD KG KN V+AVIGDGA+T G+++EA+NNAG L + +IVILNDN+      
Sbjct: 123 AALGMALARDAKGEKNQVIAVIGDGALTGGESFEALNNAGDLGTKLIVILNDNEM----- 177

Query: 255 ATLDGPIPPVGALSSALSRL----QSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
            ++D     VGA+S  LSR+    Q  R  R++  +   +   IG  +++ A+ + +  R
Sbjct: 178 -SIDAN---VGAMSEYLSRIRIAPQYARAKRDMGSLLMSIP-HIGDKVYKTASHLKDGVR 232

Query: 311 G-MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEV-KNTKTT-GPVLIHVVTEKGRG 367
             ++ GS   LFEE+G +YIGP+DGHN+    A++EEV K+ K   GPVLIH+ T KG+G
Sbjct: 233 SVLVPGS---LFEEMGFHYIGPLDGHNI----ALMEEVFKSAKEMEGPVLIHIHTVKGKG 285

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE+A +K+HGV  FDP+TGK  K +    SYT+ F++ALI  A+   D++AI AAM 
Sbjct: 286 YQPAEQAPEKFHGVGCFDPSTGKSAKKAGCAPSYTSVFSQALIELAKDRPDILAITAAMP 345

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            GTGL  F + +P R FDVGIAE+HA+T AAG+A  G+ P  A+YS+F QRAYDQ++HDV
Sbjct: 346 SGTGLKAFGKAYPKRFFDVGIAEEHAMTLAAGMAAGGMHPVIALYSTFAQRAYDQLIHDV 405

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            LQ LPV   +DRAGLVG DGPTH G FD++++  +PNM VMAP DE EL HM+ATA AI
Sbjct: 406 CLQNLPVTLCLDRAGLVGEDGPTHHGVFDLSYLRQMPNMCVMAPKDEEELRHMLATAIAI 465

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
              P+  RYPRG G+GVEL    +   L VGK  +L EG  +A L  GT V+    A+A+
Sbjct: 466 PG-PAAVRYPRGAGLGVELTDSFE--KLSVGKAEVLQEGGSIAFLAVGTMVEQVKEAAAI 522

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L   G+  TV + RF KPLD ALI ++AK+ +++IT EE  + GGFGS V ++LA  G  
Sbjct: 523 LAEEGIESTVVNMRFIKPLDTALIDAMAKTKKLIITAEENVLAGGFGSAVAEYLADSG-- 580

Query: 667 DGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               +  PLV   +PDR+I+ G+  + L+  GL P  +A  V
Sbjct: 581 ----QQVPLVRFGIPDRFIEQGTRKELLSLCGLQPEQMAECV 618


>gi|419955643|ref|ZP_14471768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri TS44]
 gi|387967556|gb|EIK51856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri TS44]
          Length = 632

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 310/649 (47%), Positives = 419/649 (64%), Gaps = 32/649 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL +LA+ELR D++F+V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELDELANELRQDLLFSVGQTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DGL+ F +RSESEYD FG GHSS
Sbjct: 72  YVFDTPDDRLVWDVGHQAYPHKILTGRRQRMSTLRQKDGLAAFPRRSESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSI A LGMA+   LKG K   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSIGAALGMAIAARLKGEKRKAIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG +S+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGMSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPAKPKQPSGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYLFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    +  G +  PLE+GKG +  +G+R ALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNATIEAGLE--PLEIGKGVVRRQGKRAALLVFGVQLPEALQVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA  H +L+TVEE SI GG GS V +FLA + ++   
Sbjct: 535 -----TVVDMRFVKPLDEALLRRLAAEHALLVTVEENSIMGGAGSAVAEFLAAEAVV--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
               PL+   LPD Y++H  P++ LA+ GL  + I A V   L    EA
Sbjct: 587 ---MPLLHLGLPDSYVEHAKPSEMLAECGLDAAGIEAAVRQRLAALGEA 632


>gi|398996324|ref|ZP_10699183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM21]
 gi|398127098|gb|EJM16513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM21]
          Length = 632

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/658 (47%), Positives = 428/658 (65%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAASDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG+G    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGSGPNATIEKDLQ--PIEIGKGIVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++ 
Sbjct: 585 NILKSVLH---LGLPDHYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLNL 632


>gi|378953115|ref|YP_005210603.1| hypothetical protein PSF113_5228 [Pseudomonas fluorescens F113]
 gi|359763129|gb|AEV65208.1| Dxs [Pseudomonas fluorescens F113]
          Length = 632

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/646 (48%), Positives = 426/646 (65%), Gaps = 35/646 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDP-----ATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           +G+  AE     YH + K +P     AT K+    A    Y+  F + L   A  D  +V
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAATPKK----AGGPKYSGVFGQWLCDMAAADPRLV 348

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
            I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAY
Sbjct: 349 GITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAY 408

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M
Sbjct: 409 DQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKM 468

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           + T    +  P+  RYPRG G    +    +  P+E+GKG I  +G++ ALL +G  +  
Sbjct: 469 LTTGHLFNG-PAAVRYPRGTGPNATISTDLE--PIEIGKGVIRRQGKQTALLVFGVQLAE 525

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQF 659
            L  + +L++     TV D RF KPLD AL+R +A SH++L+T+EE +I GG G+ V +F
Sbjct: 526 SLKVAEILDA-----TVVDMRFVKPLDEALVREMAGSHDLLVTLEENAIMGGAGAAVSEF 580

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           LA++ +L   +    L LPD Y++H  PA  LA+ GL  + I A V
Sbjct: 581 LARENILKSVLH---LGLPDTYVEHAKPAQMLAECGLDEAGIEAAV 623


>gi|293604270|ref|ZP_06686677.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii
           ATCC 43553]
 gi|292817147|gb|EFF76221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii
           ATCC 43553]
          Length = 622

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 323/634 (50%), Positives = 420/634 (66%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  +K L  RELK+LADELR  V+ +VSKTGGHL S+LG +ELT+ALH VF
Sbjct: 3   TDLLDRIQSPADLKRLDRRELKKLADELRGFVLESVSKTGGHLSSNLGTVELTLALHQVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMAQLRQQGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +A+IGDGAM+AG A+EAMNNAG   + +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAIIGDGAMSAGMAFEAMNNAGVTPNINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYATAKNVGRAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT+KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F   L   AE D  +VAI  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQSKAPGKRTFTQVFGNWLCDTAEQDTRLVAITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAG+ACEG KP  AIYS+FMQR YDQ +HDV LQ L
Sbjct: 349 VEFEKRFPLRYFDVGIAEQHAVTFAAGVACEGQKPVVAIYSTFMQRGYDQFIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAG+VGADG TH G++D  F+ C+PNMVV  PSDE+E   +++T       P+
Sbjct: 409 DVTFALDRAGIVGADGATHAGNYDTAFLRCVPNMVVATPSDESETRLLLSTCYQ-HPGPA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G     G   +  E+G+G +  EG+++A+LG+GT VQ  LAA+  L++  
Sbjct: 468 SVRYPRGAGCGAVEGTGLDTV--ELGRGIVRREGKKIAILGFGTLVQPALAAAGKLDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KP+D  LI  LA+ H+ L+T+E+ +I GG GS V++ L+ +G+    + 
Sbjct: 524 ---TVADMRFVKPIDRELILDLARRHDALVTIEDAAIMGGAGSAVLEVLSAEGV---QIP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD +IDHG  +  LA  GL    I  ++
Sbjct: 578 VLQLGLPDVFIDHGEQSALLAGLGLDAEGIEQSI 611


>gi|152984765|ref|YP_001346443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA7]
 gi|166201528|sp|A6V058.1|DXS_PSEA7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|150959923|gb|ABR81948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA7]
          Length = 627

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/641 (49%), Positives = 428/641 (66%), Gaps = 28/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   +L+ LADELR  +++ V +TGGH G+ LGV+EL
Sbjct: 7   EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILT RR+ M T+RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKDGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G++   VAVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDMK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K + A G   K +   + Y++ F + L   A  D  ++ I  A
Sbjct: 293 KGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK-YSSVFGQWLCDMAAQDARLLGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++H
Sbjct: 351 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 411 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    + P  +  P+E+GKG +   G +VALL +G  +     A 
Sbjct: 471 LFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGKVALLVFGVQL-----AE 522

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  + GL  TVAD RF KPLD AL+R LA SHE+L+++EE ++ GG GS V +FLA++G
Sbjct: 523 AMKVAEGLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620


>gi|238026700|ref|YP_002910931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
 gi|237875894|gb|ACR28227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
          Length = 648

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 328/635 (51%), Positives = 424/635 (66%), Gaps = 28/635 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L+ LADELRA V+ +VSKTGGHL  +LG +ELT+ALHYVF+ 
Sbjct: 4   LLNTIDDPADLRRLDRRQLRPLADELRAFVLDSVSKTGGHLSPNLGTVELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTYPHKILTGRR++M T+RQ  G+SGF  R+ES YD FGT HSSTSISA
Sbjct: 64  PRDRIVWDVGHQTYPHKILTGRREQMPTLRQIGGISGFPVRTESVYDTFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
             GMAV   L+  +   +AVIGDGAMTAG A+EAMNNAG  D   +IVILNDN  +S+  
Sbjct: 124 AFGMAVAAKLQDSERRAIAVIGDGAMTAGMAFEAMNNAGVADDVPLIVILNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S R     R   + V   +  PM  LA K++E+A+GMI 
Sbjct: 182 -------PPVGALNRHLARLMSGRFYAAARAGVERVLS-VAPPMLGLARKLEEHAKGMI- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D L+  L  +K  +  GP  +HVVT+KG GY  AE  
Sbjct: 233 -MPATMFEEFGFNYIGPIDGHDLDALIPTLRNIKGLR--GPQFLHVVTKKGLGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++   ++Y   F E L   AE+D  VV I  AM  G+G+  
Sbjct: 290 PVLYHGPGKFNPAEGIRPPATPPRKTYAQVFGEWLCDAAELDARVVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAGLA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 350 FEKRFPARYYDVGIAEQHAVTFAAGLATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G++D  F+ C+PNM VMA SDE E   M+ TA      P+  
Sbjct: 410 VFAIDRAGIVGADGATHAGAYDFAFLRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           RYPRG G GV      + +P+   E+ +     EG+R+A+L +GT V   LAA+  +++ 
Sbjct: 469 RYPRGAGPGVATARQMEALPIGRGEIRRRSTQQEGQRIAILAFGTMVTPALAAAEEIDA- 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               TVA+ RF KPLD  L+R LA++H+ ++TVEE ++ GG GS  V+ L  DG L   +
Sbjct: 528 ----TVANMRFVKPLDVELVRQLAETHDAIVTVEEAAVMGGAGSACVEALMADGPLRPVL 583

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +   L LPDR+IDHG PA  LA  GL  + IA ++
Sbjct: 584 Q---LGLPDRFIDHGDPAKLLAGCGLDGAGIAQSI 615


>gi|121593454|ref|YP_985350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42]
 gi|166198592|sp|A1W4U9.1|DXS_ACISJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120605534|gb|ABM41274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42]
          Length = 629

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 322/640 (50%), Positives = 427/640 (66%), Gaps = 32/640 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ +N P  ++ L   ELK LA ELRA V+ +VSKTGGHL S+LG +ELTVALH VF+
Sbjct: 7   PLLERVNDPADLRRLPRAELKTLAHELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFD 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+M ++RQ  GLSGF +R+ESEYD FGT HSSTSIS
Sbjct: 67  TPRDRLVWDVGHQTYPHKILTGRRDRMPSLRQLGGLSGFPQRAESEYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G +   VA+IGDGAMTAG A+EA+NNAG  D++++VILNDN  +S+  
Sbjct: 127 AALGMALAAKQRGDERRCVAIIGDGAMTAGMAFEALNNAGVADANLLVILNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +   + R++ K V K    P+ ELA ++++ A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGQFYAKARDMGKSVLKN-APPLLELAKRLEQQAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE ++  K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIRGLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP  G    ++   Q++T  F + L   A+ DK +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPRVGLVKPATPPKQTFTQVFGQWLCDMADKDKRLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 353 FHQRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+P+M +  P+DE E   ++ TA    D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFVRCIPHMSMACPADERECRQLLTTAYE-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G+GV   P  +G+P   GKG +   G+R+A+L +GT     L   AL  +  L 
Sbjct: 472 RYPRGAGVGVAPLPDLEGLPF--GKGEVRRTGQRIAILAFGT-----LLYPALQAAQALD 524

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + R+ KPLD  L+  +A  H+ L+TVEEG I GG GS V + LA  GL       R
Sbjct: 525 ATVVNMRWAKPLDTQLLLQVAAEHDALVTVEEGCIMGGAGSAVAEALAAAGL------QR 578

Query: 674 PLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           PL+   LPD +I+HG PA  LA  GL  + +  ++    G
Sbjct: 579 PLLQLGLPDVFIEHGDPAKLLALQGLDAAGMQRSITERFG 618


>gi|365085342|ref|ZP_09327158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
 gi|363417875|gb|EHL24926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
          Length = 633

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/639 (49%), Positives = 426/639 (66%), Gaps = 33/639 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TIN P  ++ LS  +LK LA ELR  V+ +VS+TGGHL S+LG +ELTVALH+VF+
Sbjct: 4   PLLQTINDPADLRQLSRADLKALATELRGFVLESVSQTGGHLSSNLGTVELTVALHHVFH 63

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF +R+ES YD FGT HSSTSIS
Sbjct: 64  TPEDRLVWDVGHQTYPHKILTGRRDRMHTLRQLGGISGFPQRAESIYDTFGTAHSSTSIS 123

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG   + VA+IGDGAM+AG A+EA+NNAG  D +++V+LNDN  +S+  
Sbjct: 124 AALGMALAAKRKGENRHAVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDN-DMSIS- 181

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +     + + K V + +  P+ ELA + ++ A+GM+ 
Sbjct: 182 -------PPVGALNRYLAQLMSGQFYAAAKNMGKTVLRPV-PPLLELAKRFEQQAKGMV- 232

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE  
Sbjct: 233 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSLK--GPQFLHVVTKKGQGYKLAEAD 289

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP+ G    ++   Q++T  F + L   A  D  +V I  AM  G+G+  
Sbjct: 290 PVAYHGPGKFDPSVGLTKPATPPKQTFTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVE 349

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 350 FEKRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPV 409

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++++A    D P   
Sbjct: 410 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSSAFE-QDHPVAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-------RVALLGYGTAVQSCLAASAL 607
           RYPRG+G GV      +G+P   GKG I  E +       R+A+L +GT +   L A   
Sbjct: 469 RYPRGSGAGVAPLAALEGLPF--GKGEIRRERQGSDPKAPRIAILAFGTLLYPALQAGEA 526

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + R+ KP+D AL+R +A  H+ L+T+EEG+I GG GS V + L   G++
Sbjct: 527 LDA-----TVVNMRWAKPIDEALLREVAGRHDALVTLEEGAIMGGAGSAVTEALNGMGIV 581

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPD +I+HG PA  LA  GL  + I  +V
Sbjct: 582 RPVLQ---LGLPDVFIEHGDPAKLLALQGLDAAGIEKSV 617


>gi|330812002|ref|YP_004356464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380110|gb|AEA71460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 632

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/642 (48%), Positives = 419/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F + L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGQWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++
Sbjct: 353 AMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLTTG 472

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
              +  P+  RYPRG G     P      P+E+GKG I  +G++ ALL +G  +   L  
Sbjct: 473 HLFNG-PAAVRYPRGTGPNA--PISTDLEPIEIGKGVIRRQGKQTALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SH++L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREMAGSHDLLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A V
Sbjct: 585 NILKSVLH---LGLPDSYVEHAKPAQMLAECGLDEVGIEAAV 623


>gi|452879303|ref|ZP_21956424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           VRFPA01]
 gi|452184117|gb|EME11135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           VRFPA01]
          Length = 627

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/641 (49%), Positives = 428/641 (66%), Gaps = 28/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   +L+ LADELR  +++ V +TGGH G+ LGV+EL
Sbjct: 7   EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILT RR+ M T+RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKDGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G++   VAVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDMK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K + A G   K +   + Y++ F + L   A  D  ++ I  A
Sbjct: 293 KGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK-YSSVFGQWLCDMAAQDARLLGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++H
Sbjct: 351 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 411 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    + P  +  P+E+GKG +   G +VALL +G  +     A 
Sbjct: 471 LFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGKVALLVFGVQL-----AE 522

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  + GL  TVAD RF KPLD AL+R LA SHE+L+++EE ++ GG GS V +FLA++G
Sbjct: 523 AMKVAEGLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGLDVAGIEKAV 620


>gi|332531500|ref|ZP_08407402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hylemonella gracilis ATCC
           19624]
 gi|332039052|gb|EGI75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hylemonella gracilis ATCC
           19624]
          Length = 641

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 323/640 (50%), Positives = 419/640 (65%), Gaps = 35/640 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  ++ L   +LK LADELRA V+ +VSKTGGHL S+LG +ELTVALHYVFN 
Sbjct: 5   LLNTINDPADLRQLPRSQLKPLADELRAFVLESVSKTGGHLSSNLGTVELTVALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGRR++M ++RQ  G+SGF  RSES YD FGT HSSTSISA
Sbjct: 65  PNDRLVWDVGHQTYPHKILTGRRERMGSLRQLGGISGFPLRSESAYDVFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    KG   + +AVIGDGAMTAG A+EA+N+ G  D  ++VILNDN  +S+   
Sbjct: 125 ALGMALAARQKGEDRHAIAVIGDGAMTAGMAFEALNHGGVEDCRLLVILNDN-DMSIS-- 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL+  L++L S R     ++V K V K    P+ ELA +++E A+GM+  
Sbjct: 182 ------PPVGALNRYLAQLMSGRFYSAAKQVGKSVLKA-APPLFELAKRLEEQAKGMV-- 232

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
             +TLFE+ G  YIGP+DGH++D L+  LE +K  + +GP  +HVVT+KG+GY  AE   
Sbjct: 233 VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIK--QLSGPQFLHVVTKKGQGYKLAEADP 290

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHG  KFDPA G    ++   Q++T  F + L   AE D  +V I  AM  G+G+  F
Sbjct: 291 VAYHGPGKFDPAVGLVKPTTPPKQTFTQVFGQWLCDMAEQDMRLVGITPAMREGSGMVEF 350

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +RFP R +DVGIAEQHAVT AAG+ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV 
Sbjct: 351 HQRFPGRYYDVGIAEQHAVTLAAGMACEGIKPVVAIYSTFLQRGYDQLIHDVALQNLPVV 410

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G+FD+ F+ C+PNM V  P+DE E   +++TA A  + P   R
Sbjct: 411 FALDRAGLVGADGATHAGAFDIPFLRCIPNMAVACPADERECRQLLSTAYA-QNHPVAVR 469

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKG---RILIEGER------VALLGYGTAVQSCLAASA 606
           YPRG G GV   P +   PL  GK    R    GE       +A+L +GT +   L A+ 
Sbjct: 470 YPRGAGAGVA--PLSDLEPLPYGKSEVRRWRAGGESEATKRGIAILAFGTLLYPALEAAE 527

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGL 665
            L++     TV + R+ KPLD  ++R +A  HE L+TVEEG + GG GS V + L   GL
Sbjct: 528 KLDA-----TVVNMRWAKPLDTDMLRDVAARHEALVTVEEGVVMGGAGSAVSEALQAAGL 582

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++    L LPDR+I+HG PA  LA  GL  + I   +
Sbjct: 583 ---SMPLLQLGLPDRFIEHGDPAKLLALQGLDATGIEGAI 619


>gi|399006275|ref|ZP_10708802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM17]
 gi|398122441|gb|EJM12033.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM17]
          Length = 632

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 316/642 (49%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K DP  +       A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLDPLDSPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G +VALL +G  +     A
Sbjct: 472 GHLYNGPAAVRYPRGTGPNATIEKDLQ--PIEIGKGVVRRQGSKVALLVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL  ++ L  TV D RF KPLD AL+  +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 525 EALKVADKLDATVVDMRFVKPLDEALVCEIAASHELLVTIEENAIMGGAGGAVGEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A V
Sbjct: 585 AILKPILH---LGLPDLYVEHAKPAQMLAECGLDEAGIEAAV 623


>gi|149377247|ref|ZP_01894994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter algicola
           DG893]
 gi|149358435|gb|EDM46910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter algicola
           DG893]
          Length = 644

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 316/645 (48%), Positives = 425/645 (65%), Gaps = 31/645 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  SQRP TPLLD I+ P  ++ L+  +L QLA ELRA ++++V +TGGH G+ LGV+EL
Sbjct: 9   EIPSQRPNTPLLDRIDTPGQLRELAAEQLTQLARELRAFLLWSVGQTGGHFGAGLGVLEL 68

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVFN P+DR++WDVGHQ YPHKILTGRR++M+++R+ DGL+GF KR+ESEYD FG
Sbjct: 69  TVALHYVFNTPEDRLVWDVGHQAYPHKILTGRRERMNSIRRKDGLAGFPKRAESEYDTFG 128

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   ++G     +AVIGDGAMTAG A+EA+N+AG+LD++M+VILN
Sbjct: 129 VGHSSTSISAALGMAIASRMQGTGRKSIAVIGDGAMTAGMAFEALNHAGHLDANMLVILN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAK 304
           DN  +S+           VG LS+  ++L ++R   ++R+  K V +  G P +  LA K
Sbjct: 189 DN-DMSISRN--------VGGLSNYFAKLLASRTYNQVRDSGKRVLQ--GTPQLMALARK 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +E+ +GMI  S  TLFEELG  YIGP+DGH++  L+  LE ++  +  GP  +HVVT K
Sbjct: 238 TEEHFKGMI--SPGTLFEELGFNYIGPIDGHDLPLLLETLENIR--ELDGPQFLHVVTTK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS---YTTYFAEALIAEAEVDKDVVA 421
           G+G+  AE     YH + K +P    + +  A   S   Y   F + L   AE D  +V 
Sbjct: 294 GKGFAPAEADPIGYHAINKIEPVPPSKPEPVAPKPSKLKYANVFGQWLCDAAEADDRIVG 353

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F +RFP R FDV IAEQH+VT AAGLAC+G KP  AIYS+F+QRAYD
Sbjct: 354 ITPAMCEGSDLLAFSQRFPDRYFDVAIAEQHSVTLAAGLACDGAKPVVAIYSTFLQRAYD 413

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNM+VM PSDE E   ++
Sbjct: 414 QLIHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCVPNMIVMTPSDENETRQLL 473

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            T    +  P+  RYPRG G G E+    +  PL +GKGR+  EG  VA+L +GT +   
Sbjct: 474 HTGMLFEG-PAAVRYPRGTGPGAEMI--RELAPLPIGKGRLAKEGSGVAILNFGTLLTPA 530

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           L A     +  L  TVAD RF KPLD  LI +LA+ H +L+T+EE +I GG GS V +FL
Sbjct: 531 LEA-----AKSLGATVADMRFVKPLDEELILALAEKHGLLVTIEENAIAGGAGSAVTEFL 585

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               +    ++   + LPD +IDHG   + L+  GL    I  T+
Sbjct: 586 NSRDVSQPVLQ---IGLPDTFIDHGKHGELLSSCGLDAEGIKRTI 627


>gi|429331880|ref|ZP_19212620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida CSV86]
 gi|428763391|gb|EKX85566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida CSV86]
          Length = 632

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/645 (48%), Positives = 428/645 (66%), Gaps = 33/645 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L+  +L+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRAATPAGLRRLAEADLENLADELRQELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M+T+RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMNTLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLRNEARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F + L   A  D+ +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSAVFGQWLCDMAAADERLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++
Sbjct: 353 AMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG+G     P  +   PLE+GKG I  +G +VALL +G  +     A
Sbjct: 472 GHLYNGPAAVRYPRGSGPNA--PIEDSLDPLEIGKGVIRRQGSKVALLVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL  +  L  TV D RF KPLD AL+  LA SH++L+T+EE +I GG G+ V +FLA++
Sbjct: 525 EALKVAETLNATVVDMRFVKPLDEALVLELAGSHDLLVTIEENAIMGGAGAAVGEFLARE 584

Query: 664 GLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 AVL------KPLLHLGLPDVYVEHAKPAQMLAECGLDAAGIEASV 623


>gi|88799590|ref|ZP_01115166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea blandensis
           MED297]
 gi|88777675|gb|EAR08874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea sp. MED297]
          Length = 626

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 420/641 (65%), Gaps = 27/641 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLDT+  P  ++ L + +L QLADELR  ++F+V ++GGH G+ LGV+ELT+ALH
Sbjct: 11  RPSTPLLDTVETPADLRQLPMHQLPQLADELREYLLFSVGQSGGHFGAGLGVVELTIALH 70

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P+D+++WDVGHQ YPHK+LTGRR+++ T+RQ  GL  F  R ESEYD FG GHSS
Sbjct: 71  YVYDTPEDKLVWDVGHQAYPHKVLTGRREQLPTIRQEGGLHAFPHRGESEYDTFGVGHSS 130

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMA+    KG     VAVIGDGA+TAG A+EA+N+AG+  ++M+V+LNDN  +
Sbjct: 131 TSISAALGMAIADRRKGNARQTVAVIGDGALTAGMAFEALNHAGHDGANMLVVLNDND-M 189

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VGAL+ A +R+ S++    LRE +K V K +  PM E A K +E+ +
Sbjct: 190 SISEN--------VGALNKAFARVFSSKTYSHLRENSKKVLKNL-PPMLEFARKAEEHMK 240

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+  +  TLFEELG  Y+GPVDGH+V DLV  L+ ++    +GP  +HV T+KG+G+  
Sbjct: 241 GMV--APGTLFEELGFNYVGPVDGHDVIDLVQTLQNIRT--FSGPQFLHVATQKGKGFIP 296

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE    KYH + K +P + +Q  ++A    Y+  F + L   A  D+ ++ +  AM  G+
Sbjct: 297 AENEPIKYHAITKIEPQS-EQAGAAAAKPKYSNVFGQWLCDMAARDERLLGVTPAMREGS 355

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F   +P R  DV IAEQHAVT A G+ACEG+KP  AIYS+F+QRAYDQ++HD+ LQ
Sbjct: 356 DLVAFSSLYPERYHDVAIAEQHAVTVAGGMACEGMKPVVAIYSTFLQRAYDQLIHDIALQ 415

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD T++ C+PNMVVMAP DEAE   M+ T       
Sbjct: 416 NLDVLFAIDRAGLVGEDGPTHAGSFDYTYLRCIPNMVVMAPKDEAECRAMLTTGYEYPG- 474

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG G GV++P   +   L++G+   L EG R+A+L +G+ V+ C   +  L++
Sbjct: 475 PAAVRYPRGTGPGVDIPKTLEA--LQIGQSETLREGRRIAILAFGSMVEPCRQVAEALDA 532

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                T+ + RF KPLD   +  LA+SHE+L+TVEE +I GG GS V + L Q+ L   T
Sbjct: 533 -----TLVNMRFIKPLDQDRVIQLAQSHELLVTVEENAIMGGAGSAVTETLNQNQL---T 584

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
                L LPD YIDH  PA  L+Q GL  + I   +   LG
Sbjct: 585 CACLQLGLPDAYIDHAKPARMLSQVGLDATGIQQAIERRLG 625


>gi|134298942|ref|YP_001112438.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum reducens MI-1]
 gi|134051642|gb|ABO49613.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum reducens
           MI-1]
          Length = 635

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/637 (49%), Positives = 424/637 (66%), Gaps = 22/637 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L  I  P  +KNLS+++L+ LA E+R  +I  VSKTGGHL  +LGV+ELT+ALH VF
Sbjct: 5   TSILKNIASPKDLKNLSLKQLQSLALEIRETIIKTVSKTGGHLAPNLGVVELTIALHCVF 64

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +   DRI+WDVGHQ+Y HK+LTGR  +  T+RQ  GLSGF K  ES +D F TGHSSTSI
Sbjct: 65  DTSVDRIIWDVGHQSYVHKLLTGRLAQFSTLRQYGGLSGFPKPEESIHDAFATGHSSTSI 124

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+ RDLKG K++VVAVIGDG++T G A+EA+N AG+L ++MIV+LNDN ++S+ 
Sbjct: 125 SAALGMALTRDLKGEKHSVVAVIGDGSLTGGMAFEALNYAGHLKTNMIVVLNDN-EMSIA 183

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELR-EVAKGVTKQIGGP-MHELAAKVDEYARG 311
                   P VGALS  LSRL+++    + + E+A  + K   GP + ++  ++ +  + 
Sbjct: 184 --------PNVGALSGYLSRLRTDPKYSKGKDEIADLLQKIPHGPKLLKVVDRLKDSVKY 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           ++      LFEELG  Y+GPVDGH+   ++ +L++ K    +GPVL+HV+T+KG+GY  A
Sbjct: 236 LV--VPGMLFEELGFTYLGPVDGHDTKAVLTMLQQAK--AVSGPVLVHVITKKGKGYLPA 291

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+  D+YHGV  FD  TG   KS     SYT  F E ++  A+ D  ++ I AAM  GTG
Sbjct: 292 EQNPDRYHGVGPFDLETGTVVKSQG-PPSYTEVFGETIVKLAKEDDRIIGITAAMPSGTG 350

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           LN F + FP R FDVGIAEQHAVT AAG+A  G +P  AIYS+F+QRAYDQV+HDV +Q 
Sbjct: 351 LNSFAKEFPKRYFDVGIAEQHAVTMAAGMAATGYRPIAAIYSTFLQRAYDQVLHDVCMQN 410

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DR GLVG DGPTH G FD++F+  +PN+V+M+P DE EL HM+ TA   +  P
Sbjct: 411 LPVTFALDRGGLVGDDGPTHHGVFDISFLRNIPNLVMMSPKDENELQHMLKTAVTYNG-P 469

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRGNGIG+ +    + +P  +GKG ++ EG  V LL  G  VQ  L A+  L + 
Sbjct: 470 VAIRYPRGNGIGISMDEKLQCLP--IGKGEVIREGNDVLLLAIGNMVQEALKAAESLSAQ 527

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+  TV +AR+ KPLD  LI + A   + ++T+EE  + GGFGS +++     GL D  V
Sbjct: 528 GIEATVINARYTKPLDEELILNYAGRIKNIVTIEEHVLAGGFGSSILELFESSGLTD--V 585

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
           K + L LPD +I+HG+     AQ GLT + I  TV N
Sbjct: 586 KMKRLGLPDEFIEHGTQNQLRAQYGLTSAGIVDTVLN 622


>gi|425901814|ref|ZP_18878405.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
 gi|397892836|gb|EJL09312.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
          Length = 632

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 315/642 (49%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K DP  +       A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLDPLDSPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G +VALL +G  +     A
Sbjct: 472 GHLYNGPAAVRYPRGTGPNATIEKDLQ--PIEIGKGVVRRQGSKVALLVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL  ++ L  TV D RF KPLD AL+  +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 525 EALKVADKLDATVVDMRFVKPLDEALVCEIAASHELLVTIEENAIMGGAGGAVGEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A +
Sbjct: 585 AILKPILH---LGLPDLYVEHAKPAQMLAECGLDEAGIEAAI 623


>gi|398891057|ref|ZP_10644497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM55]
 gi|398187292|gb|EJM74636.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM55]
          Length = 632

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/657 (47%), Positives = 427/657 (64%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD  L+R +A SH++L+TVEE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEELVREIAASHDLLVTVEENAIMGGAGGAVGEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       RE L++++
Sbjct: 585 NILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RERLQLLN 631


>gi|24981908|gb|AAN66154.1|AE016243_6 deoxyxylulose-5-phosphate synthase [Pseudomonas putida KT2440]
          Length = 655

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 424/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 31  EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 90

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 91  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 150

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 151 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 210

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 211 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 260

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 261 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 316

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 317 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 376

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 377 MKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 436

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 437 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 495

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 496 HLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKVALLVFGVQL-----AE 548

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 549 AMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQA 608

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 609 VL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 646


>gi|445494923|ref|ZP_21461967.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
           HH01]
 gi|444791084|gb|ELX12631.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
           HH01]
          Length = 623

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 316/631 (50%), Positives = 418/631 (66%), Gaps = 27/631 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ L+  +L  LA ELR+ ++ +VSKTGGHL S+LG +ELTVALHYVFN 
Sbjct: 3   LLENIDSPADVRKLARTQLTPLAHELRSYLLDSVSKTGGHLSSNLGTVELTVALHYVFNT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQTY HKILTGRR++MHT+RQ +G+SGF KR ESEYD FGT HSSTSISA
Sbjct: 63  PHDRIVWDVGHQTYSHKILTGRRERMHTLRQLNGISGFPKRDESEYDTFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPT 254
            LGMA    +KG   + +AVIGDG+MTAG A+EA+NNAG   D +++VILNDN  +S+  
Sbjct: 123 ALGMAQAAKIKGEHRHAIAVIGDGSMTAGMAFEALNNAGVQEDLNLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     + V K V   + GP+ ELA +++E+A+GM+ 
Sbjct: 181 -------PPVGALNRYLARLMSGQFYAAAKNVGKSV---LPGPVLELAKRLEEHAKGMV- 229

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH+++ LV  L+ +K  K  GP  +HVVT+KG+GY  AE  
Sbjct: 230 -VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIKQLK--GPQFLHVVTKKGQGYKLAEAE 286

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+PA G +  ++    SYT  F   L   A  DK +V I  AM  G+G+  
Sbjct: 287 PVLYHGTPKFNPAEGIKPAAAPGKMSYTDVFGNWLCDMAAADKKLVGITPAMREGSGMVR 346

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P R FDVGIAEQHAVTF AGLACEGLKP  AIYS+F+QR YDQ++HDV LQ L V
Sbjct: 347 FEQEYPDRYFDVGIAEQHAVTFGAGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDV 406

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ ++ C+PNMVVMA SDE E   M++T       P+  
Sbjct: 407 TFALDRAGLVGADGATHAGNYDLAYLRCIPNMVVMAASDENECRQMLSTGYHYKG-PAAI 465

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  + P  +   +E+GKG I  +G+++A+L +G+ V    AA   L++    
Sbjct: 466 RYPRGAGAGAAIQP--ELTTIEIGKGEIKRKGQKIAILAFGSMVAPATAAGEALDA---- 519

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 674
            TVA+ RF KPLD  L++ LA  ++ L+TVEEG I G     V        +   ++   
Sbjct: 520 -TVANMRFIKPLDVELVKQLAAEYDYLVTVEEGCIMGGAGAAVAEALAAEGIVKPLQM-- 576

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPD++IDHG PA  LA  GL  + I A++
Sbjct: 577 LGLPDKFIDHGDPAKLLASVGLDAAGITASI 607


>gi|161378143|ref|NP_742690.2| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida KT2440]
 gi|38372168|sp|Q88QG7.2|DXS_PSEPK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 631

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 424/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|431800579|ref|YP_007227482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida HB3267]
 gi|430791344|gb|AGA71539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida HB3267]
          Length = 631

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 310/644 (48%), Positives = 424/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVEFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLEPLEIGKGVVRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAASHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           ++      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 IV------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|148545811|ref|YP_001265913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1]
 gi|395446913|ref|YP_006387166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida ND6]
 gi|421524821|ref|ZP_15971442.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida LS46]
 gi|166201530|sp|A5VXW9.1|DXS_PSEP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148509869|gb|ABQ76729.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1]
 gi|388560910|gb|AFK70051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida ND6]
 gi|402751284|gb|EJX11797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida LS46]
          Length = 631

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 424/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|408479221|ref|ZP_11185440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. R81]
          Length = 632

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/642 (48%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAVTPAGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G     +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPVDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G + A L +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSKTAFLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|91776485|ref|YP_546241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
           flagellatus KT]
 gi|118595589|sp|Q1GZD7.1|DXS_METFK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91710472|gb|ABE50400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
           flagellatus KT]
          Length = 614

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 307/631 (48%), Positives = 420/631 (66%), Gaps = 27/631 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL++IN P  ++ L  +EL +LA +LRA +I +V++TGGHL S+LGV+ELT+ALHYVFN 
Sbjct: 4   LLESINSPEDLRRLDRKELHELARQLRAFLINSVAQTGGHLSSNLGVVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQTYPHKILTGRR  M  +R+  G++GF +R ES YD FGTGHSSTSISA
Sbjct: 64  PEDRVVWDVGHQTYPHKILTGRRKDMGNLRRPGGIAGFPRRDESIYDTFGTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV     G   + +AVIGDGAMTAG A+EA+NNAG +D++++VILNDN     P  
Sbjct: 124 ALGMAVAAQKTGSDRHSIAVIGDGAMTAGMAFEALNNAGAMDANILVILNDNDMSISPN- 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VGAL++ L++L S      +R   + V   +  P+ E A + +E+ +GM+  
Sbjct: 183 --------VGALTNYLAKLLSGPLYTTVRRSGEKVLGVV-PPVREFAKRAEEHVKGMV-- 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +  TLFEE G  YIGP+DGH++D L+  L  ++  K  GP  +H+ T+KG GY  AE   
Sbjct: 232 TPGTLFEEFGFNYIGPIDGHDIDVLITTLRNIRELK--GPQFLHIATQKGHGYQPAEDNP 289

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
            K+HGV KFDP+ G     + + ++YT  F++ L+  A  D+ +V I  AM  G+GLN F
Sbjct: 290 GKFHGVGKFDPSNGCSIAQAGK-KTYTQVFSDWLVDMAARDERLVGITPAMCDGSGLNAF 348

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             +FP R FDVGIAEQHA+TFAAG+AC+GLKP  AIYS+F+QRAYDQ +HD+ LQ LPV 
Sbjct: 349 AEQFPDRFFDVGIAEQHALTFAAGMACDGLKPVVAIYSTFLQRAYDQFIHDIALQNLPVM 408

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH GSFD++++ C+PN+++MAPSDE E   M+ T A + D PS  R
Sbjct: 409 FAIDRAGLVGADGPTHAGSFDLSYLRCIPNIIIMAPSDENECRQMLYT-AYLHDGPSAVR 467

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G G  +    + +P  +GKG +  +G  VA+L +G+ +   L A+  L++     
Sbjct: 468 YPRGGGPGATITRDMQLLP--IGKGELRRQGSWVAILAFGSMLAPALEAAETLDA----- 520

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           TVA+ RF KPLD  LI  LA SH +++TVEE ++ GG G+ V++ +      D       
Sbjct: 521 TVANMRFVKPLDANLINQLASSHTLIVTVEENAVMGGAGAAVMECMQA---ADIHTPVLC 577

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPD +I+HG     LA+ GL  + I A +
Sbjct: 578 LGLPDMFIEHGVHETMLAECGLNAAGIIAAI 608


>gi|398969623|ref|ZP_10682973.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM30]
 gi|398141760|gb|EJM30671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM30]
          Length = 632

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/643 (48%), Positives = 420/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRQRMETLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGPKYSAVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLA 603
             + + P+  RYPRG G    +   +K + P+E+GKG +  +G  VALL +G  +   L 
Sbjct: 472 GHLYNGPAAVRYPRGTGPNATI---DKDLEPIEIGKGIVRRQGSNVALLVFGVQLSEALK 528

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +  L++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G  V +FLA+
Sbjct: 529 VAEKLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLAR 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + +L   +    L LPD Y++H  PA  LA+ GL  + I A V
Sbjct: 584 ENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAAV 623


>gi|398837496|ref|ZP_10594789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM102]
 gi|398118788|gb|EJM08514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM102]
          Length = 632

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 316/643 (49%), Positives = 422/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A VD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGPKYSGVFGEWLCDMAAVDPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPKRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M++M PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLLMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLA 603
             + + P+  RYPRG G      P  K + P+E+GKG +  +G +VALL +G  +   L 
Sbjct: 472 GHLYNGPAAVRYPRGTGPNA---PITKDLEPIEIGKGVVRRQGGKVALLVFGVQLAEALK 528

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G  V +FLA+
Sbjct: 529 VAEKLDA-----TVIDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGGAVSEFLAR 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + +L   +    L LPD Y++H  PA  LA+ GL  + I   V
Sbjct: 584 ENILKSVLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEEAV 623


>gi|17546940|ref|NP_520342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum
           GMI1000]
 gi|21263512|sp|Q8XX95.1|DXS_RALSO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|17429240|emb|CAD15928.1| probable 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum GMI1000]
          Length = 636

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 317/639 (49%), Positives = 427/639 (66%), Gaps = 32/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +V++TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDAPAELRRLDRRQLGTLADELRAFVLESVAQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G     +AVIGDGAM+AG A+EAMNNAG Y +  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYLARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH+++ LV  L+ ++     G  P  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +  +     SYT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPAARPAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEQRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VMAP+DE E   +++TA A  D 
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           P+  RYPRG G GV + P  + +P+   EV +      G+RV +L +G+ V    AA+  
Sbjct: 470 PTAVRYPRGAGTGVVVQPTLEPLPVGKAEVRRASTAPAGQRVVILAFGSMVAPAAAAAER 529

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+ 
Sbjct: 530 LDA-----TVVNMRFVKPLDAACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVA 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR++DHG  A  LA  GL  + I A++
Sbjct: 585 TPVLQ---LGLPDRFVDHGDHAALLALCGLDANGILASI 620


>gi|350570639|ref|ZP_08938989.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
           9715]
 gi|349795412|gb|EGZ49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
           9715]
          Length = 626

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 323/640 (50%), Positives = 421/640 (65%), Gaps = 46/640 (7%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTIN P  ++ L   +L +LA ELRA ++ +VSKTGGH  S+LG IEL++ALHYV+
Sbjct: 3   TPLLDTINLPSDLRCLEKTQLPRLAGELRAFLLESVSKTGGHFASNLGAIELSIALHYVY 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P D ++WDVGHQ+YPHKILTGRR +MHTMRQ  GL+GF KRSESEYD FG GHSSTSI
Sbjct: 63  NTPNDHLVWDVGHQSYPHKILTGRRHRMHTMRQYSGLAGFPKRSESEYDDFGVGHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
            A LGMAV   L GR N  VA+IGDGAMTAGQA+EA+NNAG +D D++VILNDN ++S+ 
Sbjct: 123 GAALGMAVADKLAGRSNRSVAIIGDGAMTAGQAFEALNNAGDMDIDLLVILNDN-EMSIS 181

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH------ELAAKVDE 307
                   P VGAL   L    ++  +R++R V   +  Q G  +       E+A KV+ 
Sbjct: 182 --------PNVGALPKYL----ASNVVRDMRGVLSTIKNQTGKVLDKLPGALEIAQKVEH 229

Query: 308 YARGMIS-----GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
             + + S         +LFE  G  Y GPVDGHNV+ LV +L E+++ K  GP L+HV+T
Sbjct: 230 KIKAIASEGDHIKQSLSLFENFGFEYTGPVDGHNVEHLVDVLRELRSKK--GPQLLHVIT 287

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG GY  AE+   KYH + K   A+     ++    +YT  F + LI +AE D  +VAI
Sbjct: 288 KKGNGYKLAERDPVKYHAIGKTPTASEADKPAAPPKPTYTQIFGQWLIDQAEADNRLVAI 347

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
             AM  G+GL  F +RFP R FDVGIAEQHAVTFAAGLAC+G KP  AIYS+F+QR YDQ
Sbjct: 348 TPAMREGSGLVEFEQRFPERYFDVGIAEQHAVTFAAGLACQGAKPVVAIYSTFLQRGYDQ 407

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           +VHDV LQ LPV FA+DRAG+VGADGPTH G +D++F+ C+PNMV+ APSDEAE   +++
Sbjct: 408 LVHDVALQNLPVMFAVDRAGIVGADGPTHAGVYDLSFLRCIPNMVIAAPSDEAECRLLLS 467

Query: 543 TAAAIDDRPSCFRYPRGNGIGVELPPGN-KGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
           T  A+ D P+  RYPRG+G G  +P  N + +PL  GKG I  +G + A+L +G+ V+  
Sbjct: 468 TCYAL-DAPTVVRYPRGSGNGA-VPAANLETVPL--GKGIIRRQGNKTAILAFGSMVRPS 523

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFL 660
           L  +  L +     TVAD RF KPLD  LI  LA+ H+ L+  EE +  GG GS V++ L
Sbjct: 524 LGVAEKLNA-----TVADMRFVKPLDEPLILQLAREHDYLVCTEENAEQGGAGSAVLELL 578

Query: 661 AQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLT 697
           A+  +       +P++L    D   +HG PA  L Q GL+
Sbjct: 579 AKHKIC------KPVLLAAIEDIVTEHGDPALLLDQLGLS 612


>gi|397698473|ref|YP_006536356.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida
           DOT-T1E]
 gi|397335203|gb|AFO51562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida
           DOT-T1E]
          Length = 631

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 424/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VL------KPLLHLGLPDIYVEHAKPAQMLAECGLDVAGIEASV 622


>gi|237747172|ref|ZP_04577652.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           HOxBLS]
 gi|229378523|gb|EEO28614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           HOxBLS]
          Length = 615

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/638 (48%), Positives = 422/638 (66%), Gaps = 30/638 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL++IN P  ++ L   EL++LA ELR  +I +VSKTGGHL S+LG +EL +ALHYVF+ 
Sbjct: 3   LLNSINSPADLRKLPCSELQELAVELREYIIQSVSKTGGHLSSNLGTVELAIALHYVFDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+Y HKILTGRR++M T+RQ +G+SGF KR ES+YD FGT HSSTSISA
Sbjct: 63  PTDRLIWDVGHQSYAHKILTGRRNQMKTLRQLNGISGFPKRDESQYDAFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+   LK      +AVIGDGA+T G A+EAMNN G Y D +++VILNDN  +S+  
Sbjct: 123 ALGMALAARLKNENYTSIAVIGDGAITGGMAFEAMNNVGMYNDINLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  P VGAL+S  +RL S +     + V K V +   GPM E+A + +E+A+G+I 
Sbjct: 181 -------PAVGALNSYFARLMSGKFYATAKNVGKTVLR---GPMLEIAKRFEEHAKGLI- 229

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            + +TLFEE G  Y+GP+DGH+++ L+  L+ +K  K  GP  +H+VT+KG GY  AE  
Sbjct: 230 -APATLFEEFGFNYVGPIDGHDLESLIPTLQNLKERK--GPQFLHIVTKKGHGYKLAEAD 286

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG+ KF P  G +  +     +Y   F   L   A V++ +V I  AM  G+G+  
Sbjct: 287 PVLYHGLGKFSPEEGIK-PAPVSKPTYAEIFGNWLCDTAAVNQKLVGITPAMREGSGMVR 345

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 346 FAKTYPDRFFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDV 405

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ ++ C+PNMV+MAPSDE E   M+ T A + + P+  
Sbjct: 406 TFALDRAGLVGADGATHAGNYDMAYLRCIPNMVIMAPSDENEARQML-TTAFLYNGPASV 464

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G+G  +    +  PL +GKG +L  G+ +A+L +GT V S L+A   L +    
Sbjct: 465 RYPRGAGVGKAV--HQELSPLPIGKGEVLRRGQNIAILAFGTMVASSLSAGEELNA---- 518

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD AL+  +A++H  L+TVEEG+I GG GS V++ LA + + +  +   
Sbjct: 519 -TVINMRFVKPLDKALVLEIAQTHPFLVTVEEGTISGGAGSAVMETLAAEKMANPVLL-- 575

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD++IDHG     LA   L    I  ++    G+
Sbjct: 576 -LGLPDKFIDHGDVNQLLAMHNLDKDGIITSIRKRFGK 612


>gi|424925134|ref|ZP_18348495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           R124]
 gi|404306294|gb|EJZ60256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           R124]
          Length = 632

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/643 (48%), Positives = 422/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRQRMETLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSAVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLA 603
             + + P+  RYPRG G    +   +K + P+E+GKG +  +G +VALL +G  +   L 
Sbjct: 472 GHLYNGPAAVRYPRGTGPNATI---DKDLEPIEIGKGIVRRQGSKVALLVFGVQLSEALK 528

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +  L++     TV D RF KPLD AL+R +A +HE+L+T+EE ++ GG G  V +FLA+
Sbjct: 529 VAEKLDA-----TVVDMRFVKPLDEALVREIAGNHELLVTIEENAVMGGAGGAVSEFLAR 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + +L   +    L LPD Y++H  PA  LA+ GL  + I A++
Sbjct: 584 ENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI 623


>gi|388466845|ref|ZP_10141055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas synxantha
           BG33R]
 gi|388010425|gb|EIK71612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas synxantha
           BG33R]
          Length = 632

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 313/658 (47%), Positives = 427/658 (64%), Gaps = 34/658 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P ++VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGILVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G + A L +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGVVRRQGSKTAFLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKLDA-----TVVDMRFVKPLDEALVREIAASHELLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 721
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V       RE L +++ 
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV-------RERLALLAL 632


>gi|126665231|ref|ZP_01736214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. ELB17]
 gi|126630601|gb|EBA01216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. ELB17]
          Length = 656

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 317/655 (48%), Positives = 431/655 (65%), Gaps = 44/655 (6%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           QRP TP+LD I  P  M+ L   +L QLA ELR+ ++++V  TGGH G+ LGV+ELTVAL
Sbjct: 13  QRPNTPMLDRIGSPADMRQLPADQLTQLARELRSFLLWSVGTTGGHFGAGLGVLELTVAL 72

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HYVFN P+DR++WDVGHQ YPHKILTGRR++M ++R+ +GL+GF KR+ES YD FG GHS
Sbjct: 73  HYVFNTPEDRLVWDVGHQAYPHKILTGRREQMGSIRRKNGLAGFPKRTESPYDTFGVGHS 132

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA LGMA+  + +G     +AVIGDGAMTAG A+EA+N+AG+L +DM+VILNDN  
Sbjct: 133 STSISAALGMAIASNQQGLTRKSIAVIGDGAMTAGMAFEALNHAGHLKADMLVILNDN-D 191

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+           VG LS+  ++L S+R   ++R+ +K V  +I   + ELA K +E+ 
Sbjct: 192 MSISRN--------VGGLSNYFAKLLSSRTYHQMRDSSKKVL-EIAPGLRELAKKTEEHF 242

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GMI  +  TLFEELG  YIGP+DGH++  LV  LE ++  + +GP  +H+VT KG+G+ 
Sbjct: 243 KGMI--APGTLFEELGFNYIGPIDGHDLPLLVETLENIR--ELSGPQFLHIVTTKGKGFA 298

Query: 370 YAEKAADKYHGVAKFDP------ATGK--QFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
            AE     YH + K +P      A+G     KS      Y   F + L   A  D+ V+ 
Sbjct: 299 PAEADPIGYHAINKIEPMAATTVASGNPTPVKSGPAALKYANVFGQWLCDAAAADERVMG 358

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G KP  AIYS+F+QR YD
Sbjct: 359 ITPAMCEGSDLLAFAERFPARYFDVAIAEQHAVTLAAGMACDGAKPVVAIYSTFLQRGYD 418

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNMV+M PSDE E   ++
Sbjct: 419 QLIHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCIPNMVLMTPSDENETRQLL 478

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE------RVALLGYG 595
            T   + + P+  RYPRG+G GVE+ P    +PL  GKGR++ E E      R+A+L +G
Sbjct: 479 HT-GLVHEGPAAVRYPRGSGSGVEIDPLLHTLPL--GKGRVVRERERKSASGRIAILNFG 535

Query: 596 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGS 654
             +   L A+  L++     TVAD RF KPLD  LIR LA+ H++L+T+EE +I GG GS
Sbjct: 536 ALLPRALKAAQALDA-----TVADMRFVKPLDEDLIRQLAEQHDLLVTLEENAIAGGAGS 590

Query: 655 HVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            V ++L Q+ +   T+    L LPD+++DHGS    L + GL     AAT+  I+
Sbjct: 591 AVCEWLNQEEI---TMPVLQLGLPDKFVDHGSRNQLLEECGLD----AATIERII 638


>gi|398999015|ref|ZP_10701768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM18]
 gi|398132634|gb|EJM21896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM18]
          Length = 632

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/642 (48%), Positives = 417/642 (64%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFPTR FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPTRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G     P      P+E+GKG +  +G  VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGTGPNA--PIAKDLEPIEIGKGVVRRQGSTVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 530 AEKLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I   V
Sbjct: 585 NILKSVLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEEAV 623


>gi|386010187|ref|YP_005928464.1| hypothetical protein PPUBIRD1_0567 [Pseudomonas putida BIRD-1]
 gi|313496893|gb|ADR58259.1| Dxs [Pseudomonas putida BIRD-1]
          Length = 631

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 310/644 (48%), Positives = 424/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA +HE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAGNHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|397688272|ref|YP_006525591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           10701]
 gi|395809828|gb|AFN79233.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           10701]
          Length = 629

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 313/637 (49%), Positives = 423/637 (66%), Gaps = 28/637 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR D++F+V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPQTPILDRAATPAQLRRLGEAELEELANELRQDLLFSVGQTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVF+ P DR++WDVGHQ YPHKILTGRR+ M ++RQ DGL+ F +R ESEYD FG GHSS
Sbjct: 72  YVFDTPDDRLVWDVGHQAYPHKILTGRREGMASLRQKDGLAAFPRRCESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSI A LGMA+   L+G++   +AVIGDGA+TAG A+EA+N+A  + +DM+V+LNDN  +
Sbjct: 132 TSIGAALGMAIAARLQGQQRKSIAVIGDGALTAGMAFEALNHAPEVGADMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG +S+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGMSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++   +GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRD--LSGPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H + K +P    +   +     Y+  F + L   AEVD  +  I  AM  G+
Sbjct: 298 AEVDPITWHAINKLEPLDAPKKPKAPSGPRYSNVFGQWLCDMAEVDARLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFAERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYLFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           P+  RYPRG G      P  +G+ PLE+GKG +  +G +VALL +G  +   LA    L+
Sbjct: 477 PAAVRYPRGTGPNA---PIERGLEPLEIGKGVVRRQGSKVALLVFGVQLTEALAVGETLD 533

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TV D RF KPLD AL+R LA SHE+L+T+EE SI GG GS V +FLA++GLL  
Sbjct: 534 A-----TVVDMRFVKPLDEALVRQLADSHELLVTIEENSIMGGAGSAVNEFLAREGLLQP 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +    L LPD Y++H  PA  LA+ GL  + I A V
Sbjct: 589 ILN---LGLPDHYVEHAKPAQMLAECGLDEAGIEAAV 622


>gi|422590458|ref|ZP_16665113.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|330877559|gb|EGH11708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280]
          Length = 631

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 311/642 (48%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +    +  Y+  F + +   AEVD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEVDSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G    +       P+E+GKG +  +G+RVA+L +G  +     A
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQRVAILAFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  L  TV D RF KPLD ALIR  A SHE+L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 525 EALVVAEKLDATVIDMRFVKPLDEALIRETAASHELLVTLEENAVMGGAGAAVSEFLARA 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDVDGIEAAI 623


>gi|70732811|ref|YP_262578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas protegens
           Pf-5]
 gi|118595604|sp|Q4K5A5.1|DXS_PSEF5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|68347110|gb|AAY94716.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas protegens
           Pf-5]
          Length = 633

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 315/643 (48%), Positives = 423/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRAQTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMASLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRMMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLA 603
             + + P+  RYPRG G      P +K + P+E+GKG I  +G +VALL +G  +     
Sbjct: 472 GHLYNGPAAVRYPRGTGPNA---PIDKSLEPIEIGKGVIRRQGRQVALLVFGVQL----- 523

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
           A AL  +  L  TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G  V ++LA+
Sbjct: 524 AEALQVAEKLDATVVDMRFVKPLDEALVREIASSHELLVTIEENAIMGGAGGAVSEYLAR 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 584 ENILKPILH---LGLPDAYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|447918528|ref|YP_007399096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas poae
           RE*1-1-14]
 gi|445202391|gb|AGE27600.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas poae
           RE*1-1-14]
          Length = 632

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 307/637 (48%), Positives = 421/637 (66%), Gaps = 27/637 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L+  EL+ LADELR ++++ V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPSTPLLDRAATPDGLRRLAEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVF+ P DR++WDVGHQ YPHKILTGRR++M+++RQ DG++ F +R+ESEYD FG GHSS
Sbjct: 72  YVFDTPDDRLVWDVGHQAYPHKILTGRRERMNSLRQKDGIAAFPRRAESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILNDN  +
Sbjct: 132 TSISAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           AE     YH + K DP           +   Y+  F E L   A  D  +V +  AM  G
Sbjct: 298 AEVDPIGYHAITKLDPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGVTPAMKEG 357

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           + L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+VHDV +
Sbjct: 358 SDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVAV 417

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T   + +
Sbjct: 418 QNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYN 476

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G    +    +  P+E+GKG +  +G  VA L +G  +   L  +  ++
Sbjct: 477 GPAAVRYPRGTGPNAVIEKDLE--PIEIGKGIVRRQGSNVAFLVFGVQLAEALKVAEKID 534

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G+ V +FLA++ +L  
Sbjct: 535 A-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMGGAGAAVSEFLARENILKS 589

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +    L LPD Y++H  PA  LA+ GL  + I  +V
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDEAGIETSV 623


>gi|339010260|ref|ZP_08642830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           LMG 15441]
 gi|338772415|gb|EGP31948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           LMG 15441]
          Length = 628

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/640 (48%), Positives = 431/640 (67%), Gaps = 26/640 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ +  P  +K+L+I +L+QL++E+R  +I N+SKTGGHL  +LGV+ELT+ALHY FN+
Sbjct: 2   LLENMKSPDDLKHLTISQLQQLSEEIRRFLIENLSKTGGHLAPNLGVVELTIALHYCFNS 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+ILWDVGHQ Y HKILTGR+D   T+RQ  GL GF K +ES +D + TGHSSTS+S 
Sbjct: 62  PKDKILWDVGHQAYVHKILTGRKDDFPTLRQYKGLCGFPKMAESAHDVWETGHSSTSLSG 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            +GMA  RDLK    +V+ VIGDGA+T G A+EA+N+ G+   ++IV+LNDN ++S+   
Sbjct: 122 AMGMASARDLKKENYHVIGVIGDGALTGGMAFEALNHIGHEKKNVIVVLNDN-EMSIA-- 178

Query: 256 TLDGPIPPVGALSSALSRLQS----NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
                 P VGA+ + L +L++    NR   E+  + K +   +GG + +LA KV +  + 
Sbjct: 179 ------PNVGAMHNYLGKLRTDHIYNRAKDEVESLLKAIPA-VGGKLAQLAEKVKDSMKY 231

Query: 312 M-ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           M +SG    LFEELG  YIGP+DGHN++ ++  L    NT+  GPVL+HV+T+KG+GY  
Sbjct: 232 MLVSG---ILFEELGFTYIGPIDGHNLELVIDSLRTAANTR--GPVLLHVITKKGKGYLP 286

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE+ A K+HG   +   +G+  K+ A   +Y + FA+ LI   + D  +VAI  AM  G+
Sbjct: 287 AEQNAMKWHGTDTYKIESGEMIKAVAAAPAYKSVFADTLIKLTQQDDRIVAITPAMPDGS 346

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  +   +P R FDVGIAEQHA TFAAGLA +G+KPF AIYS+F+QRAYDQ++HDV   
Sbjct: 347 GLLKYASVYPERMFDVGIAEQHACTFAAGLATQGMKPFLAIYSTFLQRAYDQLIHDVARM 406

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           KLPV FA+DRAGLVGADG TH G +D+ FM  +PNMV+MAP DE E+ HM+ TAA  D  
Sbjct: 407 KLPVVFAVDRAGLVGADGETHQGVYDIAFMRAIPNMVIMAPKDENEMQHMMKTAAEYDG- 465

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P  FRYPRGNG+GV++    K +P  +G+  ++ EG+ VA+L +G        A  LL+ 
Sbjct: 466 PISFRYPRGNGLGVKMDEELKALP--IGQMEVVREGKGVAVLSFGHIYDVAEKAINLLQM 523

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
           +G+     +ARFCKPLD  L+  LAK +  ++TVEEG + GGFGS V++F A+ G  +  
Sbjct: 524 DGIMPMFVNARFCKPLDEELLLRLAKENMDIVTVEEGCVQGGFGSAVMEFYAEQGYHNMV 583

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           V+  P+ +PD +++HGS  +Q  +  LT   IAA V ++L
Sbjct: 584 VE--PMGIPDYFVEHGSVKEQRQEISLTAEAIAARVRSLL 621


>gi|319788993|ref|YP_004150626.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
 gi|317113495|gb|ADU95985.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
          Length = 617

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 320/638 (50%), Positives = 423/638 (66%), Gaps = 29/638 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +LD +N P  +K L+ +ELKQLA ELR  +I  V KTGGHL SSLGV+ELT+AL  VF+ 
Sbjct: 2   ILDKVNSPDDLKKLTTQELKQLASELRDYIISVVEKTGGHLASSLGVVELTIALLKVFSP 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD I+WDVGHQ+YP+KILT R++K  T+RQ  G+SGF    ES YD FGTGHSSTSISA
Sbjct: 62  PKDEIVWDVGHQSYPYKILTDRKEKFKTLRQFGGISGFPSIKESPYDAFGTGHSSTSISA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+ VG+ LKG + +V+AVIGDGA+TAG+AYE +NNAG L  D+IVILNDN ++S+   
Sbjct: 122 ALGIKVGKRLKGEEGHVIAVIGDGALTAGEAYEGLNNAGQLKEDLIVILNDN-EMSISKN 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI-GGPMHELAAKVDEY-ARGMI 313
                   +GA+S+ L++L +   LR  +E  + VTK+I G   ++   +V++   +G+ 
Sbjct: 181 --------IGAISNYLTKLTTGESLRRAKERLEEVTKKIFGDTFYKGLKRVEDLIVKGLF 232

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                 LFEELG  Y+GP+DGH+++ LV  L  V  +K  GP L+HV+T+KG+G+  AE+
Sbjct: 233 --PPGMLFEELGFRYVGPIDGHDIETLVTTLRNV--SKMRGPTLVHVLTKKGKGHKPAEE 288

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
             DK+HGV+       K+  S  +  +YT  F++ L+  AE D  +VAI AAM  GTGL+
Sbjct: 289 RPDKFHGVSP------KKLLSEPQPPTYTEVFSKTLVEMAEKDSSIVAITAAMPSGTGLD 342

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F  RFP R FDVGIAEQHAVTFAAGLA +GL+P  AIYS+F+QRAYDQ++HDV LQ+LP
Sbjct: 343 RFAARFPERYFDVGIAEQHAVTFAAGLAKKGLRPVVAIYSTFLQRAYDQIIHDVALQELP 402

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVG DG TH G+FD++++  +PN+VV AP DE EL H++ T A    RP  
Sbjct: 403 VTFAIDRAGLVGEDGATHHGAFDLSYLRVVPNLVVAAPKDEEELRHLLYT-AVYSGRPFA 461

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GV L    K IP  +G   +L EG  + +L  G  V   L A+  L + G+
Sbjct: 462 VRYPRGRGYGVTLREPLKKIP--IGSWEVLREGGDLLILATGWTVYQALEAARELSAEGI 519

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV +ARF KPLD  L++ LA  H  +ITVEE ++ GGFGS V +FLA     +G V  
Sbjct: 520 EATVVNARFIKPLDEKLLKELALKHSTVITVEENAVKGGFGSAVNEFLAL--WYNGRV-- 575

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
             L LPD++I+HGS A       +    I  +V  ILG
Sbjct: 576 FNLGLPDKFIEHGSQALLRKLVKIDKDGIKESVREILG 613


>gi|170719765|ref|YP_001747453.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida W619]
 gi|229836073|sp|B1J3G4.1|DXS_PSEPW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169757768|gb|ACA71084.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida W619]
          Length = 631

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 311/644 (48%), Positives = 423/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLEHLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG I  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLEPLEIGKGVIRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL  +  +  TV D RF KPLD AL+  LA SH +L+T+EE +I GG G+ V +FLA   
Sbjct: 525 ALQVAEQINATVVDMRFVKPLDEALVLELAGSHALLVTLEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           ++      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VI------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|390949923|ref|YP_006413682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocystis violascens DSM
           198]
 gi|390426492|gb|AFL73557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocystis violascens DSM
           198]
          Length = 650

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 321/632 (50%), Positives = 418/632 (66%), Gaps = 28/632 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD I+ P+ ++ LS  +L ++A ELR  ++  VS+TGGHL + LGV+ELT+ LHYVF+ 
Sbjct: 18  LLDAIDSPVDLRALSQSQLPEVASELRGFLVECVSRTGGHLAAGLGVVELTIGLHYVFDT 77

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ YPHKILTGRR++M  +RQ  G SGF KRSES YD FG GHSSTSISA
Sbjct: 78  PRDRLVWDVGHQAYPHKILTGRREQMSCLRQKGGPSGFPKRSESAYDTFGVGHSSTSISA 137

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    +G +  VVAVIGDGA+ AG A+EA+N+AG +D D++VILNDN ++S+   
Sbjct: 138 ALGMALAAKQRGERRTVVAVIGDGALGAGMAFEALNHAGSMDIDLVVILNDN-EMSIS-- 194

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMIS 314
                 PPVGA+S+ L+RL S +    +RE +K  T   G P +  L  + +E+ +GM+ 
Sbjct: 195 ------PPVGAISNHLARLLSGKLYTSVREGSK--TALAGLPHLRHLVGRWEEHMKGMV- 245

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGH++D ++  L  VK     G  L+HVVT KG GY  AE  
Sbjct: 246 -MPSTLFEELGFNYIGPIDGHDLDSVIKTLRNVKGMP--GQRLLHVVTHKGHGYEPAEGQ 302

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV  FD  TG+  K  +   SYT  F + L   AE D  +V I  AM  G+GL  
Sbjct: 303 PTTYHGVTPFDRRTGELRKGKSNGPSYTQIFGDWLCDAAEQDPRLVGITPAMCEGSGLTA 362

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVT AAG+ACEGLKP  AIYSSF+QRAYDQ +HDV LQ L V
Sbjct: 363 FAKRFPDRFFDVGIAEQHAVTLAAGMACEGLKPVVAIYSSFLQRAYDQFIHDVCLQDLDV 422

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DR GLVG DG TH GSFD++F   +P ++++APS+E E   M+ TA   +  P+  
Sbjct: 423 TFAVDRGGLVGPDGATHAGSFDLSFCRPIPKLIILAPSNENECRRMLRTAYEYEG-PAMV 481

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GV + P     P  +G+G ++  G RVALL +G+ V   L A+  L++    
Sbjct: 482 RYPRGCGPGVVIDPDAPVFP--IGRGEVIRRGRRVALLAFGSMVTPALEAAVSLDA---- 535

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD +LI  LA+ H++L+T+EE +I GG GS V + L+  GL    V+  
Sbjct: 536 -TVANMRFVKPLDESLILELAQGHDLLVTIEENAIAGGAGSAVSESLSARGL---AVRCL 591

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPDRYI+H   A+QLA  GL  + I A+V
Sbjct: 592 HLGLPDRYIEHAEHAEQLAICGLDAAGIVASV 623


>gi|167031588|ref|YP_001666819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida GB-1]
 gi|189027782|sp|B0KL79.1|DXS_PSEPG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166858076|gb|ABY96483.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida GB-1]
          Length = 631

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/644 (47%), Positives = 423/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA             Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPADKPAAPKKVSGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE++ALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKGVVRRQGEKIALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VL------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|239814578|ref|YP_002943488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax paradoxus S110]
 gi|239801155|gb|ACS18222.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus S110]
          Length = 632

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 314/640 (49%), Positives = 422/640 (65%), Gaps = 26/640 (4%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P   LL T++ P  ++     +LKQLA E+RA V+ NVS+TGGHL S+LG +ELTVALH+
Sbjct: 14  PMAALLPTLHDPSPIRQFDRAQLKQLAAEVRACVLDNVSRTGGHLSSNLGTVELTVALHH 73

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VFN P DR++WDVGHQTYPHKILTGRR++M T+RQ  G+SGF +RSESEYD FGT HSST
Sbjct: 74  VFNTPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSESEYDTFGTAHSST 133

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LGMA+    KG   + VA+IGDGA+TAG A+EA+NNAG  D  ++VILNDN  +S
Sbjct: 134 SISAALGMAMAAKQKGEDRHSVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDN-DMS 192

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVGAL+  L++L S       + V K V +    P+ ELA + +++A+G
Sbjct: 193 IS--------PPVGALNRYLAQLMSGNFYAAAKNVGKSVLRA-APPLFELAKRFEQHAKG 243

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+    +TLFE+ G  Y+GP+DGH++D LV  LE +K+    GP  +HVVT+KG+GY  A
Sbjct: 244 MV--VPATLFEQFGFNYVGPIDGHDLDSLVPTLENLKHLD--GPQFLHVVTKKGQGYKLA 299

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E     YHG  KFDP  G    ++   Q++T  F + L   A  D  +V I  AM  G+G
Sbjct: 300 EADPVAYHGPGKFDPQVGLVKPTAVAKQTFTQVFGQWLCDMAAHDGRLVGITPAMREGSG 359

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F +RFP R +DVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV +Q 
Sbjct: 360 LVEFEQRFPDRYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQN 419

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++++A    + P
Sbjct: 420 LPVVFALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERECRQLLSSAYE-QNHP 478

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G GV        +P   GKG +  EG+R+A+L +GT +   L A+  L++ 
Sbjct: 479 VAVRYPRGAGAGVVPHLALDALPF--GKGEVRREGKRIAILVFGTLLYPALTAAESLDA- 535

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
               TV + R+ KPLD  L+  +A +HE ++T+EEG++ GG GS V++ L    +    +
Sbjct: 536 ----TVVNMRWAKPLDVELLLKVAGTHEAIVTLEEGAVMGGAGSAVLEALQAANVQKPVL 591

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 710
           +   L LPDR+I+HG P   LA  GL  + IAA++    G
Sbjct: 592 Q---LGLPDRFIEHGDPGKLLASIGLDAAGIAASITQRFG 628


>gi|407368404|ref|ZP_11114936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mandelii JR-1]
          Length = 632

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 313/643 (48%), Positives = 421/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDP--ATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 423
           +G+  AE     YH + K +P  A     K S   + Y+  F E L   A  D  +V I 
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPVDAPAAAPKKSGGPK-YSGVFGEWLCDMAASDPRLVGIT 351

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
            AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+
Sbjct: 352 PAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQL 411

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           +HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T
Sbjct: 412 IHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLTT 471

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLA 603
               +  P+  RYPRG G    +    +  P+E+GKG +  +G +VALL +G  +   L 
Sbjct: 472 GHLFNG-PAAVRYPRGTGPNATIEKDLQ--PIEIGKGVVRRQGSKVALLVFGVQLAEALK 528

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +  L++     TV D RF KPLD  L+R +A SHE+L+T+EE +I GG G  V +FLA+
Sbjct: 529 VAETLDA-----TVVDMRFVKPLDEDLVRDIAGSHELLVTIEENAIMGGAGGAVSEFLAR 583

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 584 ENILKSMLH---LGLPDSYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|423699565|ref|ZP_17674055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q8r1-96]
 gi|387996687|gb|EIK58017.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q8r1-96]
          Length = 632

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 311/642 (48%), Positives = 419/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F + L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGPKYSGVFGQWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++
Sbjct: 353 AMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLTTG 472

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
              +  P+  RYPRG G    +    +  P+E+GKG I  +G+  ALL +G  +   L  
Sbjct: 473 HLFNG-PAAVRYPRGTGPNATISTDLE--PIEIGKGVIRRQGKHTALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SH++L+T+EE +I GG G+ V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREMAGSHDLLVTLEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A V
Sbjct: 585 NILKSVLH---LGLPDSYVEHAKPAQMLAECGLDEVGIEAAV 623


>gi|113868690|ref|YP_727179.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha H16]
 gi|123032800|sp|Q0K860.1|DXS_RALEH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|113527466|emb|CAJ93811.1| Deoxyxylulose-5-phosphate synthase [Ralstonia eutropha H16]
          Length = 638

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 328/656 (50%), Positives = 430/656 (65%), Gaps = 36/656 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ L  REL+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNKIDAPADLRKLDRRELRTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+YPHKILTGRR++M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 65  PDDRLVWDVGHQSYPHKILTGRRERMGTLRQWGGISGFPRRSESEYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G    G K   VAVIGDGAMTAG A+EA+NNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGARTLGEKRVSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KG+ K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRHLARLLSGQFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPY 370
           +    +TLFEE G  YIGP+DGH+++ LV  L+ ++    +  GP  +HVVT+KG+GY  
Sbjct: 233 M--VPATLFEEFGFNYIGPIDGHDLNSLVPTLQNIRERALEGAGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F RRFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFERRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM PSDE E   ++ TA      
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLLTTAFH-QAC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           PS  RYPRG+G G  +      +P  VGKG +  E     G RV  L +G+ V   L A+
Sbjct: 470 PSAVRYPRGSGPGAAIAAELTTVP--VGKGVMRREGGARAGHRVGFLAFGSMVHPALGAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++      VAD RF KPLD  L++ LA  ++ L+TVEEGS+ GG GS V++ LA+ G
Sbjct: 528 EALDA-----AVADMRFVKPLDVELVKRLAAENDYLVTVEEGSVMGGAGSAVLEALAEAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           +    +    L LPDR++DHG PA  L Q GL  + I  +V    G  +  + + S
Sbjct: 583 IDKPVLT---LGLPDRFVDHGDPAYLLQQCGLDAAGIERSVRERFGLDQPKVTVAS 635


>gi|387895862|ref|YP_006326159.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           A506]
 gi|387164060|gb|AFJ59259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           A506]
          Length = 632

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 422/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V +  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGVTP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G + A L +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGTGPNAVIEKDLE--PIEIGKGIVRRQGSKTAFLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SHE+L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAASHELLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|423097573|ref|ZP_17085369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q2-87]
 gi|397886218|gb|EJL02701.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q2-87]
          Length = 632

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/651 (47%), Positives = 422/651 (64%), Gaps = 30/651 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E    RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRNRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ  G++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRREQMGTLRQKGGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+  +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATG-KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P          A    Y+  F + L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPASAPKKAGGPKYSGVFGQWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++
Sbjct: 353 AMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRGYDQLI 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++F+ C+P M+VM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSFLRCIPGMLVMTPSDENELRKMLTTG 472

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
              +  P+  RYPRG G    + P  +  P+E+GKG I  +G++ ALL +G  +   L  
Sbjct: 473 HLFNG-PAAVRYPRGTGPNATIEPDLE--PIEIGKGVIRRQGKQTALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A  HE+L+T+EE +I GG G+ V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALLRGMADGHELLVTIEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV---FNILGQ 711
            +L   +    L LPD Y++H  PA  LA+ GL  + I A V     +LG+
Sbjct: 585 NILKSVLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEAAVRQRLQVLGR 632


>gi|422322211|ref|ZP_16403253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           C54]
 gi|317402860|gb|EFV83402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           C54]
          Length = 620

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 319/634 (50%), Positives = 418/634 (65%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  +K L  RELK+LADELR  V+ +VSKTGGHL S+LG +ELT+ALH VF
Sbjct: 3   TELLDRIQSPADLKRLDRRELKRLADELRGFVLESVSKTGGHLSSNLGTVELTLALHQVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMAKLRQVGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   D +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTADINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNVGRAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT+KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F++ L    + D  +VA+  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQSKAPGKRTFTQVFSDWLCDMGQQDPRLVAVTPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAG+ACE  KP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 349 VEFEKRFPQRYFDVGIAEQHAVTFAAGVACEAQKPVLAIYSTFLQRGYDQLIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAG+VGADG TH G++D  F+ C+PNMVV  PSDE E   +++T       P+
Sbjct: 409 DVTFALDRAGIVGADGATHAGNYDTAFLRCVPNMVVATPSDENETRLLLSTCYQYPG-PA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G     G   +  E+G+G +  EG ++A+LG+GT +Q  LA +  L++  
Sbjct: 468 SVRYPRGAGCGAAETAGLDTV--ELGRGVVRREGRKIAILGFGTLLQPALAVAEKLDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KP+D ALI  LA  H+ L+T+E+ +I GG GS V++ LA +G+   ++ 
Sbjct: 524 ---TVADMRFVKPIDRALILDLASRHDALVTIEDAAIMGGAGSAVLEVLAAEGV---SIP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L  PD +IDHG     LA  GL  + I  ++
Sbjct: 578 VLQLGFPDEFIDHGDQLALLAGIGLDAAGIEQSI 611


>gi|359782224|ref|ZP_09285446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           psychrotolerans L19]
 gi|359370017|gb|EHK70586.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           psychrotolerans L19]
          Length = 643

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 316/646 (48%), Positives = 415/646 (64%), Gaps = 33/646 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   QRP TPLLD I+ P+ ++ L   EL+ +ADELRA +++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRQRPATPLLDRIDSPVQLRQLGDAELEAVADELRAFLLWTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVFN P+DR++WDVGHQ YPHKILTGRR+ M ++RQ DGL+ F +RSESEYD FG
Sbjct: 67  TVALHYVFNTPEDRLVWDVGHQAYPHKILTGRREGMASLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSI A LGMA+   L+G +   VAVIGDGA+TAG A+EA+N+A    ++M+V+LN
Sbjct: 127 VGHSSTSIGAALGMAIAAQLQGIERKSVAVIGDGALTAGMAFEALNHASDTGANMLVVLN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+RL S+R  + LRE  K    ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLARLLSSRTYQHLRENGKKALSKLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E A+GM+     TLFEELG  YIGP+DGH++  LV  L  +++ K  GP  +HV+T KG
Sbjct: 237 EEAAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVTTLRNLRDAK--GPQFLHVITRKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G   AE     YH + K +P   K  +  A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGLSIAEADPIGYHAITKLEPLDAKPKRPGA--PKYSNIFGDWLCDMAAADAKLVGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAGLAC+G+KP  AIYS+F+QR YDQ++H
Sbjct: 351 MKEGSDLIRFAERYPERYFDVAIAEQHAVTLAAGLACDGMKPVVAIYSTFLQRGYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MV+MAPSDE EL  ++ T  
Sbjct: 411 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMAPSDENELRRLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI-----LIEGERVALLGYGTAVQS 600
                P+  RYPRG+G    L PG +  PL +GKG +     L  G +V  L +G  +  
Sbjct: 471 R-HQGPAAVRYPRGSGPNAALDPGLE--PLPIGKGVVRRQSSLKNGPKVGFLVFGVQLAE 527

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQF 659
            L  +  L++     +VAD RF KPLD ALIR  A  H++L+TVEE S+ GG GS V +F
Sbjct: 528 ALQVAERLDA-----SVADMRFVKPLDEALIRQFAADHDLLVTVEENSVMGGAGSAVNEF 582

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L  + L+   +    L LPD YI+H  PAD LA+ GL  + I   V
Sbjct: 583 LQANALVQPVLN---LGLPDSYIEHAKPADMLAECGLDVAGIERAV 625


>gi|429211673|ref|ZP_19202838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M1]
 gi|428156155|gb|EKX02703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M1]
          Length = 636

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 310/642 (48%), Positives = 422/642 (65%), Gaps = 36/642 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P+ ++ L   EL  LADELR  ++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPATPLLDRANTPVELRRLGEAELVSLADELRQYLLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   ++G     VAVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARMQGSGRKSVAVIGDGALTAGMAFEALNHASDVQADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA     K+      Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEADPIGYHAITKLEPAGAAPKKAGG--PKYSNVFGQWLCDMASQDPRLVGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G+KP  AIYS+F+QR YDQ++H
Sbjct: 351 MKEGSDLVAFAERFPERYFDVAIAEQHAVTLAAGMACDGIKPVVAIYSTFLQRGYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 411 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDEDELRKLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE--RVALLGYGTAVQSCLA 603
                P+  RYPRG+G    + P     P+E+GKG +  +G+  +VA+L +G  +   L 
Sbjct: 471 LFQG-PAAVRYPRGSGPNTPIDPTLA--PVEIGKGVLRRQGKAGKVAILAFGVQLAEALQ 527

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +   ++     TVAD RF KPLD AL+R LA SHE+L+T+EE ++ GG G+ V +FLA+
Sbjct: 528 VAERFDA-----TVADMRFVKPLDEALVRELADSHELLVTIEENAVMGGAGAAVGEFLAR 582

Query: 663 DGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHI 701
           +       + +PL+   LPD Y++H  PA  LA+ GL  + I
Sbjct: 583 EN------RQQPLLHLGLPDYYVEHAKPAQMLAECGLDAAGI 618


>gi|339485459|ref|YP_004699987.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida S16]
 gi|338836302|gb|AEJ11107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida S16]
          Length = 631

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/644 (47%), Positives = 423/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ  G++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLSLRQKGGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +++DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKSIAVIGDGALTAGMAFEALNHAQEVNADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA        A    Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVEFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + + P+  RYPRG G     P      PLE+GKG +  +GE+VALL +G  +     A 
Sbjct: 472 HLYNGPAAVRYPRGTGPNA--PISGDLEPLEIGKGVVRRQGEKVALLVFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  +  TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA   
Sbjct: 525 AMQVAEQINATVVDMRFVKPLDEALVLELAASHELLVTIEENAIMGGAGAAVGEFLASQA 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           ++      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 IV------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|337278945|ref|YP_004618416.1| 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase [Ramlibacter
           tataouinensis TTB310]
 gi|334730021|gb|AEG92397.1| 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating)
           [Ramlibacter tataouinensis TTB310]
          Length = 628

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 317/631 (50%), Positives = 421/631 (66%), Gaps = 26/631 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI  P  ++ L   +L QLA+ELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 4   LLETIQSPQDLRRLPRAQLPQLAEELRAFVLDSVSRTGGHLSSNLGTVELTIALHYVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQTYPHKILTGRRD+M T+RQ  GL+GF  R+ESEYD FGT HSSTSISA
Sbjct: 64  PHDRLVWDVGHQTYPHKILTGRRDRMGTLRQLGGLAGFPLRTESEYDAFGTAHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV    +G     VA+IGDGAM+AG A+EA+NNAG  + +++VILNDN  +S+   
Sbjct: 124 ALGMAVAAHRQGEDRKAVAIIGDGAMSAGMAFEALNNAGVAECNLLVILNDN-DMSIS-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 PPVGAL+  L++L S +     + V K V K +  P+ +LA + +E+A+GM+  
Sbjct: 181 ------PPVGALNRYLAQLMSGQFYAAAKSVGKNVLK-VAPPLFQLAKRFEEHAKGMV-- 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
             +TLFE+ G  YIGP+DGH++  L+  LE +K+ K  GP  +HVVT+KG+GY  AE   
Sbjct: 232 VPATLFEQFGFNYIGPIDGHDLHSLIPTLENLKHLK--GPQFLHVVTKKGQGYKLAEADP 289

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHG  KFDPA G    ++    ++T  F + L   A  D  +V I  AM  G+GL  F
Sbjct: 290 VAYHGPGKFDPAVGLVQPATPPKTTFTQVFGQWLCDMATQDARLVGITPAMREGSGLVEF 349

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +RFP R FDVGIAEQHAVTFAAGLACEGLKP  AIYS+F+QRAYDQ++HDV LQKLPV 
Sbjct: 350 EKRFPERYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQKLPVV 409

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
            A+DRAG+VGADGPTH G++D+ ++ C+PN+ +  P+DE E   +++ A A  D P   R
Sbjct: 410 LALDRAGIVGADGPTHAGAYDIPYLRCIPNVSIACPADENECRGLLSAAFA-QDHPVAVR 468

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G+G  +  G    PL  G+G +  +G+RVA+L +GT +   L A+  L +     
Sbjct: 469 YPRGAGVGAAVDAGLA--PLPFGRGELRRQGQRVAILAFGTLLHPALRAAERLNA----- 521

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           TV + R+ KPLD AL+  +A  HE L+TVEEG++ GG GS V + LA  G+    ++   
Sbjct: 522 TVVNMRWAKPLDQALLLEVAARHEALVTVEEGAVMGGAGSAVAEALAAAGVAKPLLQ--- 578

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L L D +I HG PA  LA  GL  + I  ++
Sbjct: 579 LGLRDEFIPHGDPARLLALQGLDDAGIERSI 609


>gi|104779860|ref|YP_606358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas entomophila
           L48]
 gi|123381053|sp|Q1IFL1.1|DXS_PSEE4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|95108847|emb|CAK13543.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas entomophila L48]
          Length = 631

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 309/644 (47%), Positives = 423/644 (65%), Gaps = 32/644 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR D+++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQDLLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRRD+M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRDRMLSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNDPRKSIAVIGDGALTAGMAFEALNHAQEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +PA             Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPADKPVAPKKPSGPKYSAVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVDFSERYPERYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH G++D++++ C+P M+VM PSDE EL  M++T  
Sbjct: 413 DVAVQDLDVLFAIDRAGLVGEDGPTHAGAYDLSYLRCIPGMLVMTPSDENELRKMLSTGH 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
                P+  RYPRG G     P      PLE+GKG +  +G +VALL +G  +   L  +
Sbjct: 473 HYKG-PAAVRYPRGTGPNA--PISGDLEPLEIGKGVVRRQGGKVALLVFGVQLTEALQVA 529

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             +++     TV D RF KPLD AL+  +A  HE+L+T+EE +I GG G+ V +FLA++G
Sbjct: 530 EQIDA-----TVVDMRFVKPLDEALVLEMAAGHELLVTIEENAIMGGAGAAVGEFLAREG 584

Query: 665 LLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           ++      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 VV------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 622


>gi|398852080|ref|ZP_10608749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM80]
 gi|398244956|gb|EJN30488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM80]
          Length = 632

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/657 (47%), Positives = 429/657 (65%), Gaps = 34/657 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMESLRQKDGIAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVNANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K DP           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLDPLDAPAAAPKPASGPKYSAVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MV+M PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVIMTPSDENELRKML-TT 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG+G    +    +  P+E+GKG +  +G +VALL +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGSGPNATIEKDLE--PIEIGKGIVRRQGSKVALLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R +A SHE+L+T+EE +I GG G  V +FLA++
Sbjct: 530 AETLDA-----TVVDMRFVKPLDEALVREIAGSHELLVTIEENAIMGGAGGAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
            +L   +    L LPD Y++H  PA  LA+ GL  + I A++       R+ LE+++
Sbjct: 585 NILKSMLH---LGLPDIYVEHAKPAQMLAECGLDEAGIEASI-------RQRLELLN 631


>gi|299066177|emb|CBJ37361.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia solanacearum CMR15]
          Length = 636

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 315/639 (49%), Positives = 424/639 (66%), Gaps = 32/639 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI+ P  ++ L  R+L  LADELRA V+ +V++TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNTIDAPAELRRLDRRQLGTLADELRAFVLESVAQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ+YPHKILTGRR++M T+RQ DG+SGF +RSES YD FGT HSSTSISA
Sbjct: 65  PDDRIVWDVGHQSYPHKILTGRREQMATLRQLDGISGFPRRSESPYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G   +G     +AVIGDGAM+AG A+EAMNNAG Y +  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGAKTQGENRVAIAVIGDGAMSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+   +RL S +     +   KGV K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRYFARLMSGQFYAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPY 370
           +    +T+FEE G  YIGP+DGH+++ LV  L+ ++     G  P  +HVVT+KG+GY  
Sbjct: 233 L--VPATMFEEFGFNYIGPIDGHDLESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+P  G +  +     SYT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPQEGIKPAARPAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F RRFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFERRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM P+DE E   +++TA A    
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMVPADENECRQLLSTAFA-QAC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPL---EVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
           P+  RYPRG G G  + P  + +P+   EV +      G+RVA+L +G+ V    AA+  
Sbjct: 470 PTAVRYPRGAGTGAAVQPTLEPLPVGKAEVRRASTAPAGQRVAILAFGSMVAPAAAAAER 529

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L++     TV + RF KPLD A +  +A++H+ ++TVEEG + GG GS  ++ LA  G+ 
Sbjct: 530 LDA-----TVVNMRFVKPLDAACVLEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVA 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              ++   L LPDR++DHG  A  LA  GL  + I A++
Sbjct: 585 TPVLQ---LGLPDRFVDHGDHAALLALCGLDANGILASI 620


>gi|423016478|ref|ZP_17007199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           AXX-A]
 gi|338780420|gb|EGP44828.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           AXX-A]
          Length = 620

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 319/634 (50%), Positives = 416/634 (65%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  +K L  RELK+LADELR  V+ +VSKTGGHL S+LG +ELT+ALH VF
Sbjct: 3   TELLDRIQSPADLKRLDRRELKRLADELRGFVLESVSKTGGHLSSNLGTVELTLALHQVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMAKLRQLGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   + +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTANINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNVGRAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT+KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F++ L    E D  +VA+  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQSKAPGKRTFTQVFSDWLCEMGEQDSRLVAVTPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFA G+ACE  KP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 349 VEFEKRFPQRYFDVGIAEQHAVTFAGGIACEAQKPVLAIYSTFLQRGYDQLIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAG+VGADG TH G++D  F+ C+PNMVV  PSDE E   +++T       P+
Sbjct: 409 DVTFALDRAGIVGADGATHAGNYDTAFLRCVPNMVVATPSDENETRLLLSTCYQYPG-PA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G     G   +  E+G+G +  EG ++A+LG+GT VQ  LA +  L++  
Sbjct: 468 SVRYPRGAGCGAAETAGLGTV--ELGRGVVRREGRKIAILGFGTLVQPALAVAEKLDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KP+D ALI  LA  H+ L+T+E+ +I GG GS V++ LA +G+    + 
Sbjct: 524 ---TVADMRFVKPIDRALILDLASRHDALVTIEDAAIMGGAGSAVLEVLAAEGI---AIP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L  PD +IDHG     LA  GL  + I  ++
Sbjct: 578 VLQLGFPDEFIDHGDQLALLAGIGLDAAGIEQSI 611


>gi|440737921|ref|ZP_20917472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BRIP34879]
 gi|440381660|gb|ELQ18186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BRIP34879]
          Length = 632

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 306/637 (48%), Positives = 420/637 (65%), Gaps = 27/637 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD    P  ++ L+  EL+ LADELR ++++ V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPSTPLLDRAATPDGLRRLAEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YVF+ P DR++WDVGHQ YPHKILTGRR++M+++RQ DG++ F +R+ESEYD FG GHSS
Sbjct: 72  YVFDTPDDRLVWDVGHQAYPHKILTGRRERMNSLRQKDGIAAFPRRAESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILNDN  +
Sbjct: 132 TSISAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           AE     YH + K DP           +   Y+  F E L   A  D  +V +  AM  G
Sbjct: 298 AEVDPIGYHAITKLDPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGVTPAMKEG 357

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           + L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+VHDV +
Sbjct: 358 SDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVAV 417

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T   + +
Sbjct: 418 QNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST-GHLYN 476

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G    +    +  P+E+GKG +  +G  VA L +G  +   L  +  ++
Sbjct: 477 GPAAVRYPRGTGPNAVIEKDLE--PIEIGKGIVRRQGSNVAFLVFGVQLAEALKVAEKID 534

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TV D RF KPLD AL+R +A SHE+L+TVEE +I  G G+ V +FLA++ +L  
Sbjct: 535 A-----TVVDMRFVKPLDEALVREIAGSHELLVTVEENAIMAGAGAAVSEFLARENILKS 589

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +    L LPD Y++H  PA  LA+ GL  + I  +V
Sbjct: 590 VLH---LGLPDVYVEHAKPAQMLAECGLDEAGIETSV 623


>gi|237797520|ref|ZP_04585981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020370|gb|EGI00427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 631

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 420/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDQADTPDGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +       Y+  F + +   AE D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVSIQKKVSAPKYSGVFGQWICDMAEADSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVEFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G   E+    K  P+E+GKG +  +G+ VA+L +G  +   +  
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAEIEASLK--PVEIGKGVVRRQGQGVAILVFGVQLSDAMVV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  L++     TV D RF KPLD AL+R  A SHE+L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 530 AEKLDA-----TVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARV 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLNAEGIEAAI 623


>gi|253699519|ref|YP_003020708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sp. M21]
 gi|251774369|gb|ACT16950.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M21]
          Length = 635

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 314/638 (49%), Positives = 415/638 (65%), Gaps = 24/638 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  IN P  +K L   EL  LA+E+RA ++  V++TGGHL S+LG +ELT+ALHY F++
Sbjct: 4   LLSKINGPADLKKLDAEELTPLAEEVRAFLLETVTRTGGHLASNLGTVELTIALHYCFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+I+WDVGHQ Y HKILTGRRD  HT R   G+SGF KR+ES +D FG GHSSTSISA
Sbjct: 64  PKDKIIWDVGHQAYTHKILTGRRDSFHTQRCYKGISGFPKRAESPHDAFGVGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV + LK     +++VIGDG++T G A+EA+N AG+L  ++IV+LNDN ++S+   
Sbjct: 124 GLGMAVAQGLKEDAARIISVIGDGSLTGGMAFEALNQAGHLKKNLIVVLNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSN---RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                   VGALSS +SR  +    R L++  E        IG  +   A K +   +G 
Sbjct: 183 --------VGALSSFISRKMTGGYYRSLKKEMEALMANIPAIGSNILHFAKKAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +  TLFE LG  Y+GP+ GH++  L+ +LE VK  +  GP+L+HV+T+KG+GYP AE
Sbjct: 235 L--TPGTLFEGLGFEYVGPIAGHDLPTLLGVLENVK--RLEGPILLHVMTKKGKGYPPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
              DK+HGVA   PA+    K      SYT+ F E ++   EVD  ++AI AAM  GTGL
Sbjct: 291 TMPDKFHGVAPTKPASASPTKRPP--PSYTSVFGETMVKLGEVDPKILAITAAMPDGTGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F  RFP R FDVGIAEQHA+TFAAGLA EG +P  AIYS+F QRAYDQV HD+ LQKL
Sbjct: 349 TPFAERFPDRFFDVGIAEQHALTFAAGLAVEGFRPVAAIYSTFTQRAYDQVFHDICLQKL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DRAGLVG DGPTH GSFD++++  LP + VMAP DE EL HM+ T A    RP 
Sbjct: 409 PVTLALDRAGLVGDDGPTHHGSFDISYLRHLPELTVMAPKDENELQHMLKT-ALYSGRPI 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV L    + +P  +GKG +LI+G  + ++  G+ V   L A+A L   G
Sbjct: 468 SLRYPRGAGFGVPLDQELQELP--IGKGELLIDGGDLTIVAIGSTVHPALEAAAQLRQKG 525

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVK 671
           +  +V +ARF KP+D  LI + AK    L+TVEE + +GGFGS V++ ++  GL    V+
Sbjct: 526 IFASVVNARFIKPIDSELILAQAKKTGCLVTVEENALLGGFGSAVLELISDAGL--NAVR 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            + + +PDR+I+ G+ A   A  GL  + IAAT    L
Sbjct: 584 IKRIGIPDRFIEQGTQAQLRADLGLDAAGIAATCETFL 621


>gi|423693798|ref|ZP_17668318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SS101]
 gi|388001385|gb|EIK62714.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SS101]
          Length = 632

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 421/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ DGL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMASLRQKDGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  +D++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGSERKAIAVIGDGALTAGMAFEALNHAPEVDANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V +  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGVTP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G + A L +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGTGPNAVIEKDLE--PIEIGKGIVRRQGSKTAFLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A  HE+L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVVDMRFVKPLDEALVREIAAGHELLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEASV 623


>gi|399522390|ref|ZP_10763054.1| dxs [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399109824|emb|CCH39615.1| dxs [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 631

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 311/641 (48%), Positives = 416/641 (64%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD+ N P  ++ L+  +L+ LADELR  ++++V ++GGH G+ LGVIEL
Sbjct: 7   EIPRERPLTPLLDSANTPDELRRLAEADLETLADELRQYLLYSVGQSGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M ++RQ  GL+ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMGSLRQKHGLAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   LKG K   VAVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGALTAGMAFEALNHATDVGANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A KV
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKIISSRTYASMREGSKKILSRLPGAW-EIARKV 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+A+GM+     TLFEELG  Y+GP+DGH++  L+A L  +++    GP  +HVVT+KG
Sbjct: 237 EEHAKGML--VPGTLFEELGWNYVGPIDGHDLPTLLATLRNMRDLD--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + L   A  D  +V I  A
Sbjct: 293 KGFAPAEADPIGYHAITKLEPVPPVAAPKQPSGPKYSNVFGQWLCDMAAADNRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M+ T  
Sbjct: 413 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRMLTTGH 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG G    L  G +  PLE+GK  +  +G+ VALL +G  +   L   
Sbjct: 473 LFDG-PAAVRYPRGTGPNAPLDAGLE--PLEIGKAVVRRQGKGVALLAFGVQLAEALRVG 529

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++     TV D RF KPLD AL+R LA SHE+L+T+EE SI GG GS V +F A + 
Sbjct: 530 ETLDA-----TVVDMRFVKPLDEALLRELAGSHELLVTIEENSIMGGAGSAVSEFFAAEN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +    +    L LPD Y++H  P+  LA+ GL  + I   V
Sbjct: 585 I---QLPMLHLGLPDYYVEHAKPSQMLAECGLDEAGIERAV 622


>gi|344342928|ref|ZP_08773798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marichromatium purpuratum
           984]
 gi|343805480|gb|EGV23376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marichromatium purpuratum
           984]
          Length = 643

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 317/638 (49%), Positives = 425/638 (66%), Gaps = 30/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL +I+ P  ++ L   +L ++A ELR+ ++  VS+TGGHL + LGV+ELT+ LHYVF+
Sbjct: 17  PLLASIDSPSDLRALPESQLPEVAHELRSLLVDTVSRTGGHLAAGLGVVELTLGLHYVFD 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ YPHKILTGRRD+MH++RQ  GLSGF KR ES YD FG GHSSTSIS
Sbjct: 77  TPEDRVVWDVGHQAYPHKILTGRRDRMHSLRQKGGLSGFPKRGESAYDTFGVGHSSTSIS 136

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G + NV+AVIGDGA+ AG A+EA+N+AG +D D+ VILNDN ++S+  
Sbjct: 137 AALGMAIAAKQRGERRNVIAVIGDGALGAGMAFEALNHAGSMDIDLTVILNDN-EMSIS- 194

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                  PPVGA+S+ L+RL S +    +RE +K   +  G P + EL  + +E+ +GM+
Sbjct: 195 -------PPVGAISNHLARLLSGKLYTSMREGSKSALR--GMPQLRELVGRWEEHMKGMV 245

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTK-TTGPVLIHVVTEKGRGYPYAE 372
               STLFEELG  YIGP+DGH   DL ++L+ ++N K   G  L+HVVT KG GY  AE
Sbjct: 246 --MPSTLFEELGFNYIGPIDGH---DLESVLKTLRNVKGMPGQRLLHVVTHKGHGYEPAE 300

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                +HGV  FD  TG+  KS A+  +YT  F   L   A  D  +VAI  AM  G+G+
Sbjct: 301 GQPVTFHGVTPFDRQTGEFRKSKAKGPTYTKVFGSWLCDTAARDPRLVAITPAMCEGSGM 360

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R  DVGIAEQHAVT AAG+ACEG+KP  AIYSSF+QRA+DQ+VHDV LQ+L
Sbjct: 361 GEFAKRFPQRFHDVGIAEQHAVTLAAGMACEGVKPVVAIYSSFLQRAFDQLVHDVCLQQL 420

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V  A+DR GLVGADG TH G FD++F   LP++V+MAP+DE E   M+ T    +  P+
Sbjct: 421 DVTLAVDRGGLVGADGATHAGCFDLSFSRPLPDLVIMAPADENECRQMLKTGYEFNG-PA 479

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV + P    +P  +G+G  + EG+RVA+L +GT V   L  +  L++  
Sbjct: 480 MVRYPRGVGPGVAVDPAAPALP--IGRGLRVREGQRVAMLAFGTMVAPALEVAEELDA-- 535

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVA+ RF KPLD  LI +LA+ H +L+T+EE ++ GG GS + + L  +G++   V 
Sbjct: 536 ---TVANMRFVKPLDRELILALAREHALLVTLEENTLAGGAGSAITELLNAEGVV---VP 589

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
              L LPDR +DH + A+QLA+ GL  + I  +V   L
Sbjct: 590 VLQLGLPDRNVDHATQAEQLAECGLDVAGIRDSVSRAL 627


>gi|345877365|ref|ZP_08829115.1| 1-deoxy-D-xylulose 5-phosphate synthase [endosymbiont of Riftia
           pachyptila (vent Ph05)]
 gi|344225605|gb|EGV51958.1| 1-deoxy-D-xylulose 5-phosphate synthase [endosymbiont of Riftia
           pachyptila (vent Ph05)]
          Length = 583

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 311/585 (53%), Positives = 400/585 (68%), Gaps = 29/585 (4%)

Query: 62  SERGEYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLG 121
           +E+G Y        LL+ ++ P  ++ L  ++L  LA ELR  +I +VS+TGGHL + LG
Sbjct: 8   TEQGSYS-------LLEQVDLPQDLRRLEPKQLPLLALELRRFLIESVSRTGGHLAAGLG 60

Query: 122 VIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEY 181
           V+ELT+ALHYVFN P+DR++WDVGHQ YPHKILTGRR++M  +RQ  G SGF KRSES+Y
Sbjct: 61  VVELTIALHYVFNTPQDRLIWDVGHQAYPHKILTGRREQMAKLRQQGGPSGFPKRSESDY 120

Query: 182 DCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
           D FGTGHSSTSISA LGMAV    KG    VVAVIGDG++ AG A+EA+N+AG LD D++
Sbjct: 121 DTFGTGHSSTSISAALGMAVAARRKGESRKVVAVIGDGSIGAGMAFEALNHAGVLDQDLL 180

Query: 242 VILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL 301
           V+LNDNK +S+          PVGA S+ LSRL S      +RE  K +   +   + EL
Sbjct: 181 VVLNDNK-MSISK--------PVGAFSNHLSRLLSGTLYTGMREGGKSLLSHLPSQVSEL 231

Query: 302 AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
             + +E+ +GM+     T+FEELG  YIGP+DGH++D LV  L  +  +K +GP L+HVV
Sbjct: 232 MGRWEEHMKGMV--LPGTMFEELGFNYIGPIDGHDLDTLVPTLRNM--SKLSGPCLLHVV 287

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           T+KGRGY  AE++   YHGV  F+PATG+  K      SYT  F + L A AE D+ ++A
Sbjct: 288 TQKGRGYEPAEESPIAYHGVTPFNPATGEMTKGGG-GPSYTQIFGDWLCATAEKDERLLA 346

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+G+  F RRFP R FDVGIAEQHA+T AAG+ACEG KP  AIYSSF+QRAYD
Sbjct: 347 ITPAMCEGSGMVEFARRFPKRYFDVGIAEQHALTLAAGMACEGAKPVVAIYSSFLQRAYD 406

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV LQ L V  A+DRAG VGADG TH GSFD+++   LPNM++MAPSDE E   M+
Sbjct: 407 QLIHDVVLQNLDVTLAVDRAGQVGADGATHAGSFDLSYARVLPNMLIMAPSDENECSRML 466

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            TA      P+  RYPRG G G E+    K  PLE+G+GR+  EG RVALL +G+ +Q+ 
Sbjct: 467 QTAYDYPG-PAMVRYPRGGGTGAEVEQPAK--PLELGQGRLRREGCRVALLSFGSLLQTA 523

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 646
           LAA+  L++     TVAD RF KPLD AL+  LA  HE+L+T+EE
Sbjct: 524 LAAAEQLDA-----TVADMRFVKPLDEALVLDLASRHELLVTLEE 563


>gi|339326732|ref|YP_004686425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus necator N-1]
 gi|338166889|gb|AEI77944.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Cupriavidus necator
           N-1]
          Length = 638

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 327/656 (49%), Positives = 429/656 (65%), Gaps = 36/656 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I+ P  ++ L  REL+ LADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVFN 
Sbjct: 5   LLNKIDAPADLRKLDRRELQTLADELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+YPHKILTGRR++M T+RQ  G+SGF +RSESEYD FGT HSSTSISA
Sbjct: 65  PDDRLVWDVGHQSYPHKILTGRRERMGTLRQWGGISGFPRRSESEYDTFGTAHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPT 254
            LGMA+G    G K   VAVIGDGAMTAG A+EA+NNAG Y D  ++V+LNDN  +S+  
Sbjct: 125 ALGMALGARTLGEKRVSVAVIGDGAMTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPMHELAAKVDEYARGM 312
                  PPVGAL+  L+RL S +     +   KG+ K   +  P+ E A + +E+A+GM
Sbjct: 183 -------PPVGALNRHLARLLSGQFYAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPY 370
           +    +TLFEE G  YIGP+DGH+++ LV  L  ++    +  GP  +HVVT+KG+GY  
Sbjct: 233 M--VPATLFEEFGFNYIGPIDGHDLNSLVPTLLNIRQRALEGAGPQFLHVVTKKGQGYKL 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHG  KF+PA G +  +    ++YT  F + L   A  DK +V I  AM  G+
Sbjct: 291 AEADPILYHGPGKFNPAEGIRPAAKPARKTYTQVFGDWLCDMAAADKRLVGITPAMREGS 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F +RFP R +DVGIAEQHAVTFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ
Sbjct: 351 GMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G++D+ ++ C+PNM+VM PSDE E   ++ TA      
Sbjct: 411 NLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLLTTAFH-QTC 469

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAAS 605
           PS  RYPRG+G G  +      +P  VGKG +  E     G RV  L +G+ V   L A+
Sbjct: 470 PSAVRYPRGSGPGAAIAAELTTVP--VGKGVMRREGGARAGHRVGFLAFGSMVHPALGAA 527

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
             L++      VAD RF KPLD  L++ LA  ++ L+TVEEGS+ GG GS V++ LA+ G
Sbjct: 528 EALDA-----AVADMRFVKPLDVELVKRLAAENDYLVTVEEGSVMGGAGSAVLEALAEAG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 720
           +    +    L LPDR++DHG PA  L Q GL  + I  +V    G  +  + + S
Sbjct: 583 IDKPVLT---LGLPDRFVDHGDPAYLLQQCGLDATGIERSVRERFGLDQPKVTVAS 635


>gi|56477948|ref|YP_159537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aromatoleum aromaticum
           EbN1]
 gi|81598684|sp|Q5P228.1|DXS_AZOSE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56313991|emb|CAI08636.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) (DXP synthase)
           (DXPS) [Aromatoleum aromaticum EbN1]
          Length = 621

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 317/636 (49%), Positives = 418/636 (65%), Gaps = 27/636 (4%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           PP PLL  I+ P  ++ L  REL  LA ELRA +I +VSKTGGHL S+LG +EL++ALHY
Sbjct: 2   PPYPLLHRIDSPFDLRKLDRRELPALAAELRAFLIESVSKTGGHLSSNLGTVELSIALHY 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +F+ P+DRI+WDVGHQTY HKILTGRR+ M  +RQ  G+SGF +RSES YD FGT HSST
Sbjct: 62  IFDTPEDRIVWDVGHQTYGHKILTGRREAMSRLRQFGGISGFPRRSESSYDTFGTAHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQV 250
           SISA LGMAV    +G +   +AVIGDGAM+AG A+EA+NNAG + D +++VILNDN ++
Sbjct: 122 SISAALGMAVAARNRGEQRRSIAVIGDGAMSAGMAFEALNNAGDMRDINLLVILNDN-EM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGAL+  L+R+ S R     R   + V   +  PM + A KV+E+ +
Sbjct: 181 SIS--------PPVGALTKILARMFSGRTYNAARRAGEKVLG-VSPPMLDFARKVEEHVK 231

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G+I+    TLFEE G +Y GP+DGH++D L+  L+ ++  K  GP  +HV+T KG+GY  
Sbjct: 232 GLITPG--TLFEEFGFHYYGPIDGHDLDALIPTLQNLR--KLNGPHFLHVITRKGQGYKL 287

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHGV+ FD   G Q    A   +YT  F + L   A  D+ V+ I  AM  G+
Sbjct: 288 AEADPVLYHGVSTFDHTAGIQTAKGAAKLTYTQVFGDWLCDIAAQDEKVIGITPAMREGS 347

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F + FP R +DVGIAEQHA+TFAAGLACEG KP  AIYS+F+QRAYDQ++HD+ LQ
Sbjct: 348 GMVRFAQEFPNRYYDVGIAEQHALTFAAGLACEGFKPVVAIYSTFLQRAYDQLIHDIALQ 407

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G+FD++++ C+PN+VVMAP+DE E   M+ TA    + 
Sbjct: 408 NLPVMFAIDRAGLVGADGATHHGAFDLSYLGCIPNLVVMAPADENECRQMLYTAYR-HNG 466

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG G+  ++ P      L +GKG I   G R+ALL +G+ + + L A+  L++
Sbjct: 467 PAAVRYPRGGGM--QVGPETAMSALPIGKGEIRRSGHRIALLVFGSLLFNALQAAEQLDA 524

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGT 669
                TVA+ RF KPLD  LI  LA SH++L+T+EE   IGG GS V + L  + L D  
Sbjct: 525 -----TVANMRFVKPLDVTLIEELAASHDLLVTLEENIVIGGAGSEVARVL--ESLSDRP 577

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              R L LPD +IDHG  +  L   GL    I A +
Sbjct: 578 QLLR-LGLPDTFIDHGDQSQLLESVGLDAPGIVAAI 612


>gi|118595180|ref|ZP_01552527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophilales bacterium
           HTCC2181]
 gi|118440958|gb|EAV47585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophilales bacterium
           HTCC2181]
          Length = 613

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 303/635 (47%), Positives = 427/635 (67%), Gaps = 27/635 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+ INYP  +KNLS  ELK LADELR  VI +VSKTGGHL S+LGVIELTVALHYV++A
Sbjct: 3   ILEKINYPKDLKNLSRDELKLLADELREFVIESVSKTGGHLSSNLGVIELTVALHYVYDA 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+++WDVGHQTY HKI+TGR+ +MHT+R+ +GLSGF +RSES YD FGTGHSSTSISA
Sbjct: 63  PKDKLVWDVGHQTYAHKIITGRKHEMHTLRRKNGLSGFPRRSESMYDEFGTGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA     +  KN  +A+IGDGAMTAG A+E +N++G  D++++VILNDN  +S+   
Sbjct: 123 ALGMAEALRKRKSKNKAIAIIGDGAMTAGMAFEGLNHSGSTDNNILVILNDN-DMSISKN 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VGAL++ L++L S R    L+   K V  ++  P+ ELA K +E+ +GM+  
Sbjct: 182 --------VGALNNYLAKLLSGRVYDGLKRSGKAVFSKV-PPILELARKTEEHMKGMV-- 230

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEE G  YIGP+DGH++D L+  LE +K  K  GP  +HV T+KG GY  A+   
Sbjct: 231 IPGTLFEEFGFNYIGPIDGHDLDVLIDTLENIK--KIDGPQFLHVATKKGFGYAPAQDDP 288

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           +K+HGV KF+P  G   K S ++ +YT  F+  L+  A+ +  + AI  AM  G+GLN F
Sbjct: 289 NKFHGVGKFNPEDGLS-KDSNKSLTYTQVFSLWLMDAAKKNMHLCAITPAMSDGSGLNAF 347

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +++P+R +DVGIAEQHA+TFAAGLA  G KP  AIYS+FMQRAYDQ++HD+ +Q +P+ 
Sbjct: 348 AKKYPSRYYDVGIAEQHALTFAAGLALSGNKPVVAIYSTFMQRAYDQLIHDIAIQNIPML 407

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G+FD++FM C+PN+++MAPS+E+E FHM++     +      R
Sbjct: 408 FAIDRAGLVGADGATHSGNFDISFMRCIPNLILMAPSNESECFHMLSFGYKYNG-VCAVR 466

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRGN  G  +   N   P+ +G    +  G++VA+L +G  ++ C   +  + +     
Sbjct: 467 YPRGNSPGSSIELLND--PIRIGCANKVRTGKKVAILAFGPIIEVCREVAEEINA----- 519

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           ++ D RF KP+D  +I+ + K HE++++VEE +I GG GS V++ +++  LL  T+    
Sbjct: 520 SLIDMRFIKPIDKKMIKQVCKDHELIVSVEENAITGGAGSSVLEVISESNLLTKTL---V 576

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           L +PD++ +H S  + L   GL    I   +   L
Sbjct: 577 LGIPDQFFEHASQQEVLKACGLDKQSIKRKIVKQL 611


>gi|421152011|ref|ZP_15611603.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 14886]
 gi|404526143|gb|EKA36375.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 14886]
          Length = 627

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 313/641 (48%), Positives = 424/641 (66%), Gaps = 28/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   +L+ LADELR  +++ V +TGGH G+ LGV+EL
Sbjct: 7   EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILT RR+ M T+RQ +GL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G++   VAVIGDGA+TAG A+EA+N+A   D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEGDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDMK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K + A G   K +   + Y++ F + L   A  D  ++ I  A
Sbjct: 293 KGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK-YSSVFGQWLCDMAAQDARLLGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++H
Sbjct: 351 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 411 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    + P  +  P+E+GKG +   G R+ALL +G  +     A 
Sbjct: 471 LFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRIALLVFGVQL-----AE 522

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  L  TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA +G
Sbjct: 523 AMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620


>gi|422651840|ref|ZP_16714631.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330964914|gb|EGH65174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 631

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 421/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +    +  Y+  F + +   AEVD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEVDSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G    +       P+E+GKG +  +G+ VA+L +G  +     A
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQGVAILAFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  L  TV D RF KPLD AL+R  A SH++L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 525 EALVVAEKLNATVIDMRFVKPLDEALVRETAASHQLLVTLEENAVMGGAGAAVSEFLARA 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAI 623


>gi|322420928|ref|YP_004200151.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
 gi|320127315|gb|ADW14875.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
          Length = 635

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 317/633 (50%), Positives = 413/633 (65%), Gaps = 24/633 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  IN P  +K L   EL  LADE+R  ++  V+KTGGHL S+LGV+EL++ALHY F++
Sbjct: 4   LLSKINGPDDLKKLDAEELVLLADEVRGFLMETVAKTGGHLASNLGVVELSIALHYCFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD I+WDVGHQ Y HKILTGRRD  HT R   G+SGF KRSES +D FG GHSSTSISA
Sbjct: 64  PKDNIVWDVGHQAYTHKILTGRRDSFHTQRCYKGISGFPKRSESPHDAFGAGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLG+AV   LKG    V++VIGDG++T G A EA+N AG+L  +MIV+LNDN ++S+   
Sbjct: 124 GLGLAVAHTLKGDDARVISVIGDGSLTGGMALEALNQAGHLKKNMIVVLNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV---TKQIGGPMHELAAKVDEYARGM 312
                   VGALSS +SR  +    R L++  +G+      IG  +   A K +   +G 
Sbjct: 183 --------VGALSSFISRKMTGTYYRSLKKEMEGLLAGIPAIGCNILHFAKKAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +  TLFE LG  Y+GP+ GH++  L+ +LE VK  K  GP+L+HV+T+KG+G+P AE
Sbjct: 235 L--TPGTLFEALGFEYVGPIAGHDIPTLIGVLENVK--KLEGPILVHVMTKKGKGHPPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
              DK+HGVA   PA+    K      SYT+ F + L+   E D  ++AI AAM  GTGL
Sbjct: 291 NMPDKFHGVAPTKPASATSAKQPP--PSYTSVFGDTLVKLGEKDPKILAITAAMPDGTGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F  RFP R FDVGIAEQHA+TFAAGLA EG +P  AIYS+F QRAYDQV HD+ LQKL
Sbjct: 349 TPFADRFPDRFFDVGIAEQHALTFAAGLAAEGFRPVAAIYSTFTQRAYDQVFHDICLQKL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DRAGLVG DGPTH G+FD++++  LP + VMAP DE EL HM+ T A    RP 
Sbjct: 409 PVTLALDRAGLVGDDGPTHHGAFDISYLRHLPELTVMAPKDENELQHMLKT-AIYHGRPI 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV +    K   LE+GKG +L+EG  + L+  G+ V   L A+ALL+  G
Sbjct: 468 SLRYPRGAGFGVTMEKELKA--LEIGKGELLVEGSDLTLVAIGSTVYPALEAAALLKQKG 525

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVK 671
           +  +V +ARF KPLD  LI S A     ++TVEE + +GGFGS V++ +A  GL    V+
Sbjct: 526 IFASVVNARFIKPLDRELILSEASRTGCMVTVEENALLGGFGSAVLEAVADAGLTG--VR 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 704
            + + +PD +I+ G+ +   A  GL  + IAAT
Sbjct: 584 MKRIGIPDSFIEQGTQSQLRADLGLDGAGIAAT 616


>gi|83648506|ref|YP_436941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hahella chejuensis KCTC
           2396]
 gi|118595584|sp|Q2SA08.1|DXS_HAHCH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|83636549|gb|ABC32516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hahella chejuensis KCTC
           2396]
          Length = 643

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 311/643 (48%), Positives = 419/643 (65%), Gaps = 29/643 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E    RP TPLLD I+ P  ++ L+  EL QLA ELRA ++++V ++GGH G+ LGV+EL
Sbjct: 9   EIPVHRPNTPLLDKIDSPAQLRLLNEAELLQLAHELRAFLLYSVGQSGGHFGAGLGVVEL 68

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHY FN P+DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +R ES YD FG
Sbjct: 69  TVALHYAFNTPEDRLVWDVGHQAYPHKILTGRREQMLTIRQKDGLAAFPRREESPYDTFG 128

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+ +    +AVIGDGAMTAG A+EA+N+A    +D++VILN
Sbjct: 129 VGHSSTSISAALGMAIAARLQNQPRKAIAVIGDGAMTAGMAFEALNHAADTKADLLVILN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAK 304
           DN  +S+           VG LS+  +RL +++   ++R+  K V +  G P + ELA K
Sbjct: 189 DN-DMSISRN--------VGGLSNYFARLLASKTYNQMRDSGKRVLQ--GAPSLMELARK 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +E+ +GM+  +  TLFEELG  YIGP+DGH++  LV  L  +K  +  GP  +HVVT+K
Sbjct: 238 TEEHFKGMV--APGTLFEELGFNYIGPIDGHDLPRLVETLNNIK--ELNGPQFLHVVTKK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSA-RTQSYTTYFAEALIAEAEVDKDVVAIH 423
           G+G+ +AE     YH + K +P    Q  + A +   Y+  F + L   AE D  +V I 
Sbjct: 294 GKGFAHAESDPIGYHAINKIEPKPKVQDTAKAPKKPRYSNIFGQWLCDMAEQDASLVGIT 353

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
            AM  G+ L  F +RFP R +DV IAEQHAVT AAGLAC+G KP  AIYS+F+QRAYDQ+
Sbjct: 354 PAMCEGSDLIEFSKRFPERYYDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYDQL 413

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           +HDV +Q L V FA+DRAGLVG DGPTH GSFD+TF+ C+PNM++MAPSDE E   M+ T
Sbjct: 414 IHDVAIQNLDVLFAIDRAGLVGEDGPTHAGSFDLTFLRCIPNMLIMAPSDEDETRKMLTT 473

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLA 603
                  P+  RYPRGNG G ++ PG +   LE+GK  +   G +  +L +G  + + L 
Sbjct: 474 GYQYTG-PAAVRYPRGNGPGADISPGLES--LEIGKANLRRRGAQTVILNFGALLPAALG 530

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +   ESN    TV D RF KPLD  +I  +A SH++L+T+EE  I GG GS V++FLA 
Sbjct: 531 VAE--ESN---FTVVDMRFIKPLDQNMILEMAGSHDLLVTLEENCILGGAGSGVIEFLAS 585

Query: 663 DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            G+    ++   L LPD +I+HG PA+   + GL    IA  +
Sbjct: 586 QGIAMPVLQ---LGLPDEFIEHGKPAELHKEVGLDAQGIANAI 625


>gi|148263091|ref|YP_001229797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
           Rf4]
 gi|146396591|gb|ABQ25224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
           Rf4]
          Length = 637

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 321/641 (50%), Positives = 415/641 (64%), Gaps = 23/641 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TIN P  +K L   +L  LADE+R  ++  VSKTGGHL S+LG +ELT+ALHY FN+
Sbjct: 4   LLNTINSPADLKKLKQDKLLILADEIREFLLETVSKTGGHLASNLGCVELTLALHYCFNS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D I+WDVGHQ Y HKI+TGRRDK  T RQ  G+SGF KRSES +D FG GHSSTSISA
Sbjct: 64  PDDSIIWDVGHQAYTHKIITGRRDKFITQRQYHGISGFPKRSESMHDAFGAGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV   LK   + V+AVIGDG++T G A+EA+N AG+L  ++IV+LNDN ++S+   
Sbjct: 124 GLGMAVAHGLKEEASKVIAVIGDGSLTGGIAFEALNQAGHLHKNLIVVLNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI---GGPMHELAAKVDEYARGM 312
                   VGALS+ +SR  +    R L++  +G+ K I   GG +   A K +   +G 
Sbjct: 183 --------VGALSTFISRKLTGSYYRGLKKEMQGLLKNIPAIGGNILHFARKAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           ++    TLFE LG  YIGPV GH++  L+ I++ V+  +  GPVL+HV+T KG+GY  AE
Sbjct: 235 LTPG--TLFEALGFEYIGPVQGHDLPQLIEIMQNVRALE--GPVLVHVMTTKGKGYQPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           K  DK+HGV  FD  TGK        QSYT  F E ++  A  DK ++AI AAM  GTGL
Sbjct: 291 KTPDKFHGVGPFDVKTGKVIAGKPGAQSYTGIFGETMVKLAAEDKKIIAITAAMPDGTGL 350

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F + +P R FDVGIAEQHA+TFAAG+A EG +P  AIYS+F+QRAYDQV HD+ LQKL
Sbjct: 351 TPFAKAYPDRFFDVGIAEQHALTFAAGMATEGFRPVAAIYSTFVQRAYDQVFHDICLQKL 410

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DRAGLVG DGPTH G FD++++  LP M VMAP DE EL HM+ T A   DRP 
Sbjct: 411 PVTLALDRAGLVGDDGPTHHGVFDLSYLRHLPEMTVMAPKDENELQHMLKT-AIYSDRPI 469

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV +    + IP  +G G  L EG  + L+  G+ V   + A+ LL+  G
Sbjct: 470 ALRYPRGAGYGVAMDESLQAIP--IGVGEQLAEGGDLTLVAIGSTVYPAMEAAELLKEKG 527

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +R TV +ARF KPLD  LI + A     +ITVEE ++ GGFGS V++ LA +      ++
Sbjct: 528 IRATVINARFVKPLDRNLILAAAGRTGCIITVEENAMQGGFGSAVLELLADEA---AGIR 584

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
            + + +PDRYI+ GS A       L  + IA T    LG+ 
Sbjct: 585 VKRIGVPDRYIEQGSQAQLRQDLRLDAAGIAQTAAEFLGKN 625


>gi|351729178|ref|ZP_08946869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax radicis N35]
          Length = 627

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 314/635 (49%), Positives = 422/635 (66%), Gaps = 33/635 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TIN P  ++ LS  +LK LA ELR  VI +V++TGGHL S+LG +ELTVALH+VFN
Sbjct: 7   PLLQTINDPADLRKLSRADLKALATELRGFVIESVAQTGGHLSSNLGTVELTVALHHVFN 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQTYPHKILTGRRD+MHT+RQ  G+SGF +R+ES YD FGT HSSTSIS
Sbjct: 67  TPEDRLVWDVGHQTYPHKILTGRRDRMHTLRQLGGISGFPQRAESAYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG   + VA+IGDGAM+AG A+EA+NN G  D++++V+LNDN  +S+  
Sbjct: 127 AALGMALAAKRKGENRHAVAIIGDGAMSAGMAFEALNNGGVADANLLVVLNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S +     + V K V + +  P+ E A + +++A+GM+ 
Sbjct: 185 -------PPVGALNRYLAQLMSGQFYAAAKNVGKTVLRPV-PPLLEFAKRFEQHAKGMV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  LE +K+ K  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKSLK--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KFDP+ G    ++    ++T  F + L   A  D  +V I  AM  G+G+  
Sbjct: 293 PVAYHGPGKFDPSVGLTKPATPPKPTFTQVFGQWLCDMAAHDTRLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 353 FEKRFPDRYYDVGIAEQHAVTFAAGMACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   +++TA    D P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIPFVRCIPNMSMACPADERECRQLLSTAFE-QDHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-------RVALLGYGTAVQSCLAASAL 607
           RYPRG+G GV    G   +P   GKG I  E +       R+A+L +GT     L   AL
Sbjct: 472 RYPRGSGAGVAPLAGLDSLPF--GKGEIRRERQGTDAKAPRIAILSFGT-----LLYPAL 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
             +  L  TV + R+ KP+D AL+R +A+ H+ L+T+EEG+I GG GS V + L   G++
Sbjct: 525 EAAEALDATVVNMRWAKPIDAALLREVAERHDALVTLEEGAIMGGAGSAVTEALNTLGIV 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
              ++   L LPD +I+HG PA  LA  GL  + I
Sbjct: 585 RPVLQ---LGLPDVFIEHGDPAKLLALQGLDAAGI 616


>gi|289623774|ref|ZP_06456728.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. NCPPB 3681]
 gi|289646545|ref|ZP_06477888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|422581074|ref|ZP_16656218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|298160571|gb|EFI01593.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330865925|gb|EGH00634.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 630

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + +   AE D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVVPKKISAPKYSAVFGQWICDMAEADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VH
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  ++ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +  G    P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPDALIETGLD--PVEIGKGVVRRQGQGVAILVFGVQL-----AD 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 ILKSVLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAI 622


>gi|422680446|ref|ZP_16738718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
 gi|331009792|gb|EGH89848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
          Length = 630

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + +   AE D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VH
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  ++ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +  G    P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNALIETGLD--PVEIGKGVVRRQGQGVAILVFGVQL-----AD 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVGAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 ILKSVLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAI 622


>gi|302879473|ref|YP_003848037.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans
           ES-2]
 gi|302582262|gb|ADL56273.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans
           ES-2]
          Length = 613

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 314/631 (49%), Positives = 414/631 (65%), Gaps = 27/631 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLDTI+ P  ++ LS  +L QLA ELR  ++ +VSKTGGHL S+LG +ELT+ALH VFN 
Sbjct: 4   LLDTIDTPEALRALSREQLPQLARELREFLVESVSKTGGHLSSNLGTVELTIALHTVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQTY HKILTGRR  M  +R   G++GF KR ES YD FGTGHSSTSISA
Sbjct: 64  PEDRLVWDVGHQTYVHKILTGRRAAMSGLRMEGGIAGFPKREESPYDTFGTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV   L G     VA+IGDGAMT G A+EA+NNAG ++++++VILNDN  +S+   
Sbjct: 124 ALGMAVAAQLSGSARRSVAIIGDGAMTGGMAFEALNNAGAMNANLLVILNDN-DMSISR- 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                  PVGAL++ L++L S R    +R  ++ V K +  P+ E A + +E+ +GM+  
Sbjct: 182 -------PVGALNNYLAKLMSGRFYAAMRRGSEKVLKGM-PPVLEFAKRAEEHVKGMV-- 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              T+FEE G  YIGP+DGH+++ L+  L  ++  +  GP  +HVVT+KG+GY  AE+  
Sbjct: 232 IPGTMFEEFGFNYIGPIDGHDLNALIDTLSNIRQLE--GPQFLHVVTQKGKGYTLAEEDC 289

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHGV+KFD   G   K S    SYT  F + L   A  D  VV I  AM  G+G+  F
Sbjct: 290 LLYHGVSKFDRTNGIVPKPSG-NPSYTQVFGQWLCDIAAEDARVVGITPAMCEGSGMGEF 348

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             ++P R FDVGIAEQHA+TFAAGLAC+G KP  AIYS+F+QRAYDQ++HD+ +QKLPV 
Sbjct: 349 AEKYPQRYFDVGIAEQHALTFAAGLACDGYKPVVAIYSTFLQRAYDQLIHDIAIQKLPVI 408

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
            A+DR GLVGADG TH GSFD++F+ C+PNM VMAPSDE E   M+ TA  +D  P+  R
Sbjct: 409 LAIDRGGLVGADGATHAGSFDLSFLRCIPNMTVMAPSDENECRQMLYTAMTLDT-PTAVR 467

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG G GV +    + +P  VGK  +  EG RVA+L +G+     + A AL+    L  
Sbjct: 468 YPRGVGPGVAVCNEMQALP--VGKAEVRREGVRVAILAFGS-----MLAPALIAGEQLDA 520

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           TV + RF KPLD  L+  +A +HE+++TVEE ++ GG GS V + LA+ G+    V    
Sbjct: 521 TVVNMRFVKPLDAELLHRMASAHELVVTVEENTVQGGAGSAVAECLAEAGI---AVNLLH 577

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L LPDR+ID G P   LA  GL  + I   +
Sbjct: 578 LGLPDRFIDQGDPVKMLADCGLDSAGIIVAI 608


>gi|257482377|ref|ZP_05636418.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tabaci str. ATCC 11528]
          Length = 630

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + +   AE D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VH
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  ++ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +  G    P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNALIETGLD--PVEIGKGVVRRQGQGVAILVFGVQL-----AD 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 ILKSVLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAI 622


>gi|197119726|ref|YP_002140153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
           Bem]
 gi|197089086|gb|ACH40357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
           Bem]
          Length = 635

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 315/638 (49%), Positives = 414/638 (64%), Gaps = 24/638 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  IN P  +K L   EL  LA+E+RA ++  V++TGGHL S+LG +ELT+ALHY F++
Sbjct: 4   LLSKINGPDDLKKLDAEELTPLAEEVRAFLLETVTRTGGHLASNLGAVELTIALHYCFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+I+WDVGHQ Y HKILTGRRD  HT R   G+SGF KR+ES +D FG GHSSTSISA
Sbjct: 64  PKDKIIWDVGHQAYTHKILTGRRDSFHTQRCYKGISGFPKRAESPHDAFGVGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV + LK     V++VIGDG++T G A+EA+N AG+L  ++IV+LNDN ++S+   
Sbjct: 124 GLGMAVAQGLKEDAARVISVIGDGSLTGGMAFEALNQAGHLKKNLIVVLNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSN---RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                   VGALSS +SR  +    R L++  E        IGG +   A K +   +G 
Sbjct: 183 --------VGALSSFISRKMTGGYYRSLKKEMEALMANIPAIGGNILHFAKKAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +  TLFE LG  Y+GP+ GH++  L+ +LE VK  +  GP+L+HV+T+KG+GYP AE
Sbjct: 235 L--TPGTLFEGLGFEYVGPIAGHDLPTLLGVLENVK--RLEGPILLHVMTKKGKGYPPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
              DK+HGVA   PA+    K      SYT+ F   ++   E+D  ++AI AAM  GTGL
Sbjct: 291 TMPDKFHGVAPTKPASASPAKLPP--PSYTSVFGNTMVKLGEIDPKILAITAAMPDGTGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F  RFP R FDVGIAEQHA+TFAAGLA EG +P  AIYS+F QRAYDQ+ HDV LQKL
Sbjct: 349 TPFAERFPDRFFDVGIAEQHALTFAAGLAVEGFRPVAAIYSTFTQRAYDQIFHDVCLQKL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DRAGLVG DGPTH GSFD++++  LP + VMAP DE EL HM+ T A    RP 
Sbjct: 409 PVTLALDRAGLVGDDGPTHHGSFDISYLRHLPELTVMAPKDENELQHMLKT-ALYSGRPI 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV L    + +P  +GKG +LI+G  + ++  G+ V   L A+A L   G
Sbjct: 468 SLRYPRGAGFGVPLDHELQELP--IGKGELLIDGGDLTIVAIGSTVHPALEAAAQLRQKG 525

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVK 671
           +   V +ARF KP+D  LI + AK    L+TVEE + +GGFGS V++ L+  GL    V+
Sbjct: 526 IFAAVVNARFIKPIDSELILAQAKKTGCLVTVEENALLGGFGSAVLELLSDAGL--NAVR 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            + + +PDR+I+ G+ A   A  GL  + IAAT    L
Sbjct: 584 IKRIGIPDRFIEQGTQAQLRADLGLDAAGIAATCETFL 621


>gi|416019023|ref|ZP_11565916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|416024128|ref|ZP_11568307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|422594222|ref|ZP_16668513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|422603974|ref|ZP_16675992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           mori str. 301020]
 gi|320321851|gb|EFW77947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331042|gb|EFW87016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330886860|gb|EGH20295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330984530|gb|EGH82633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 630

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + +   AE D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VH
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  ++ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +  G    P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNALIETGLD--PVEIGKGVVRRQGQGVAILVFGVQL-----AD 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 ILKSVLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAI 622


>gi|422402852|ref|ZP_16479912.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872287|gb|EGH06436.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 622

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 307/637 (48%), Positives = 416/637 (65%), Gaps = 26/637 (4%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIELT+AL
Sbjct: 3   ERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIAL 62

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG GHS
Sbjct: 63  HYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHS 122

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILNDN  
Sbjct: 123 STSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILNDN-D 181

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA
Sbjct: 182 MSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRTEEYA 232

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG+G+ 
Sbjct: 233 KGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKGKGFA 288

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE     YH + K +P              Y+  F + +   AE D  +V I  AM  G
Sbjct: 289 PAEVDPIGYHAITKLEPLNAPVAPKKISAPKYSAVFGQWICDMAEADSRLVGITPAMKEG 348

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           + L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VHDV +
Sbjct: 349 SDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVAV 408

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  ++ T   +  
Sbjct: 409 QNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-GYLHT 467

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G    +  G    P+E+GKG +  +G+ VA+L +G  +     A AL+ 
Sbjct: 468 GPAAVRYPRGTGPNALIETGLD--PVEIGKGVVRRQGQGVAILVFGVQL-----ADALVV 520

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  +L  
Sbjct: 521 AEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKS 580

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 581 VLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAI 614


>gi|188586311|ref|YP_001917856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229836068|sp|B2A526.1|DXS_NATTJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|179350998|gb|ACB85268.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 631

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 315/641 (49%), Positives = 418/641 (65%), Gaps = 24/641 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LL  IN    +K+LS  +L +LA+ELR  +I ++S TGGHL  +LGV+ELT+A+H VF
Sbjct: 2   TKLLSYINTSEDLKHLSTEDLNKLAEELREFLISSISITGGHLAPNLGVVELTLAIHKVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +  +D+I+WDVGHQ+Y HKILTGR+++  T+RQ  GLSGF K  ES YD FGTGHSSTSI
Sbjct: 62  SPIQDKIVWDVGHQSYIHKILTGRKEQFSTLRQFGGLSGFPKPEESRYDAFGTGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA  RDL+G    V+AVIGDGAMT G A+EAMN+AG+  ++M VILNDN ++S+ 
Sbjct: 122 SAALGMAKARDLQGSNEEVLAVIGDGAMTGGMAFEAMNHAGHEQANMTVILNDN-EMSIG 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI---GGPMHELAAKV-DEYA 309
           T         VGALSS LSRL+++     ++E  + + K+I   GG M +   +V D   
Sbjct: 181 TN--------VGALSSYLSRLRTDPKYHRIKEDVEFLLKRIPAIGGKMMKSVERVKDSMK 232

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
             M+SG    LFEELG  YIGP+DGHN+  L+ +L   K+    GPVL+HV+T+KG+GY 
Sbjct: 233 YLMVSG---MLFEELGFTYIGPIDGHNIPQLMEVLNNAKDK--NGPVLVHVITKKGKGYE 287

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AEK  DK+HG   F+  TG   K +    SY+  F + +   A  ++ VVAI AAM  G
Sbjct: 288 PAEKFPDKFHGTGPFEIETGNAPKKAETAPSYSKVFGDTISEIARKNESVVAITAAMKDG 347

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           TGL  F R FP R FDVGIAEQHA+TFAAGLA +G KP  AIYS+F+QRAYDQ++HDV +
Sbjct: 348 TGLTNFAREFPERFFDVGIAEQHAITFAAGLARKGFKPVVAIYSTFLQRAYDQIIHDVCM 407

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q  PV FA+DRAG+VG DG TH G +D++++  +PN++VMAP DEAEL  M+ TA  I +
Sbjct: 408 QDNPVIFAIDRAGIVGGDGETHQGLYDLSYLRSIPNLIVMAPKDEAELQRMLNTAVNI-N 466

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           +P   RYPRG G GV L      IPL   KG  + EG +VA++G G  V   L  + +L+
Sbjct: 467 KPVAIRYPRGKGEGVTLWENMTPIPLY--KGETIREGSQVAMIGVGKMVPDMLEVADMLK 524

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDG 668
             G+  TV +ARF KPLD + I  +A+ HE + T EE + +GGFGS V++ L++ GL   
Sbjct: 525 KEGIEPTVFNARFVKPLDESSILEIAQKHEYIYTFEENTELGGFGSQVLECLSKHGLAHK 584

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            +      LPD YI HG  +  L+Q  L    +   + N L
Sbjct: 585 LIDR--FCLPDEYIPHGDRSKVLSQYSLHSQELINKILNRL 623


>gi|71735584|ref|YP_272899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|118595603|sp|Q48NX0.1|DXS_PSE14 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71556137|gb|AAZ35348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 630

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P              Y+  F + +   AE D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAPKKISAPKYSAVFGQWICDMAEADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VH
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  ++ T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLNT-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +  G    P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPDALIETGLD--PVEIGKGVVRRQGQGVAILVFGVQL-----AD 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 ILKSVLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAI 622


>gi|452124387|ref|ZP_21936971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella holmesii F627]
 gi|451923617|gb|EMD73758.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella holmesii F627]
          Length = 623

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 318/613 (51%), Positives = 414/613 (67%), Gaps = 27/613 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T  LD I+ P  ++ L  R+LK +ADELRA V+ +VS+TGGHL S+LG +ELT+ALHYVF
Sbjct: 4   TEHLDRIHSPADLRKLDRRDLKPIADELRAFVLESVSRTGGHLSSNLGTVELTLALHYVF 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRRD M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 64  DTPHDRIVWDVGHQSYPHKILTGRRDGMAQLRQQGGISGFPKRSESEYDAFGTAHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G     +AVIGDGAM+AG A+EAMNNAG   + +++VILNDN  +S+
Sbjct: 124 SAALGMAVASRNAGVARQHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVILNDN-DMSI 182

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA +++E+A+GM
Sbjct: 183 S--------PPVGALNRYLARLMSGRFYATAKNVGRAVLQHV-PPVLELARRLEEHAKGM 233

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           I  + +TLFEE G  Y+GP+DGH+++ L+  L+ +K  +  G   +HVVT KG+GY  AE
Sbjct: 234 I--TPATLFEEFGFNYVGPIDGHDLEALIPTLQNLKTLQ--GLQFLHVVTRKGQGYKLAE 289

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   Q++T  F++ L  +A+ D  +V I  AM  G+GL
Sbjct: 290 ADPVLYHGPGKFDPAVGIQKAKTPSKQTFTQVFSQWLCDQAQADVRLVGITPAMREGSGL 349

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAGLACEG KP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 350 VEFEKRFPMRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQLIHDVALQNL 409

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ F+ C+PNMV+  PSDE E   +++T  A    P+
Sbjct: 410 DVTFALDRAGLVGADGATHAGNYDIAFLRCVPNMVIATPSDENETRLLLSTCYAYPG-PA 468

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G E+  G + + L  G+  +   G ++A+LG+GT VQ+ LAA     + G
Sbjct: 469 SVRYPRGAGCGAEVTSGLEIVALGKGR--VRRRGRKIAILGFGTLVQAALAA-----AEG 521

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           L  TVAD RF KPLD  L+R LA SH+ L+T+E+ +I GG GS V + L   GL+   + 
Sbjct: 522 LDATVADMRFVKPLDRELLRELAASHDALVTLEDAAIMGGAGSAVTEALNDMGLVLPVLH 581

Query: 672 WRPLVLPDRYIDH 684
              L LPD +IDH
Sbjct: 582 ---LGLPDEFIDH 591


>gi|312963292|ref|ZP_07777775.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           WH6]
 gi|311282372|gb|EFQ60970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           WH6]
          Length = 632

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 419/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRKRPSTPLLDRAATPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  ++++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVEANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +H+VT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHIVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSART-QSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P           +   Y+  F E L   A  D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  M++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRGNG    +    +  P+E+GKG +  +G  VA L +G  +   L  
Sbjct: 472 GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGKGIVRRQGSNVAFLVFGVQLAEALKV 529

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +  +++     TV D RF KPLD AL+R +A SH +L+TVEE +I GG G+ V +FLA++
Sbjct: 530 AEKIDA-----TVIDMRFVKPLDEALVREIAGSHALLVTVEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  P   L++ GL  + I A+V
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPVQMLSECGLDEAGIEASV 623


>gi|422296713|ref|ZP_16384378.1| deoxyxylulose-5-phosphate synthase [Pseudomonas avellanae BPIC 631]
 gi|407992058|gb|EKG33763.1| deoxyxylulose-5-phosphate synthase [Pseudomonas avellanae BPIC 631]
          Length = 631

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 421/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +    +  Y+  F + +   AEVD  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEVDSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G    +       P+E+GKG +  +G+ VA+L +G  +     A
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQGVAILVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  L  TV D RF KPLD AL+R  A SH++L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 525 EALVVAEKLNATVIDMRFVKPLDEALVRETAASHQLLVTLEENAVMGGAGAAVSEFLARA 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDVDGIEAAI 623


>gi|387127050|ref|YP_006295655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM1]
 gi|386274112|gb|AFI84010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM1]
          Length = 611

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/633 (47%), Positives = 423/633 (66%), Gaps = 34/633 (5%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LL  I+ P  ++ L  ++L+QLA E+R  ++  + +TGGH+ S+LGV+ELT+ALHYV+
Sbjct: 7   TSLLSQIDSPAQLRKLDRKQLEQLAIEIRELIVDQIQQTGGHISSNLGVVELTLALHYVY 66

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+DR++WDVGHQ+Y HKILTGRRD++HTMRQ  GLSGF KRSES YD FG GHSSTSI
Sbjct: 67  NTPEDRLVWDVGHQSYTHKILTGRRDQLHTMRQPGGLSGFPKRSESNYDSFGVGHSSTSI 126

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+     G  N  VA+IGDGA+TAGQAYEA+ +AG L++DM+V+LNDN ++S+ 
Sbjct: 127 SAALGMAIAARATGSSNRSVAIIGDGALTAGQAYEALAHAGDLNADMLVVLNDN-EMSIS 185

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                     VG +++ L+RL S R  R  RE +K + ++I  P  E A + +E+ +GM+
Sbjct: 186 KN--------VGGMANYLARLLSGRFYRSARESSKKMLEKI-PPAWEFARRTEEHVKGMM 236

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                TLFEE+G  YIGP+DGH++D L+  L  ++N+K  G   +H+VT+KG+G+  AE+
Sbjct: 237 --VPGTLFEEMGFNYIGPIDGHDLDTLITTLNNLRNSK--GAQFLHIVTKKGKGFKPAEQ 292

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
              KYHGV+   PA  K+        ++T  F++ L       +D++AI  AM  G+GLN
Sbjct: 293 QPCKYHGVS---PANSKK-----SGPTFTQVFSQWLCDMGTASEDLIAITPAMCEGSGLN 344

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP R FDVGIAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 345 DFAKRFPERYFDVGIAEQHAVTLAAGMACEGKKPVVAIYSTFLQRAYDQLIHDVALQNLP 404

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH GSFD++++ C+PNM++M PS+E E   M+ T     + P+ 
Sbjct: 405 VLFAIDRAGLVGADGATHAGSFDLSYLRCIPNMLIMTPSNENECRQMLTTGFH-HNGPAA 463

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+G G  + P  +  PL + K +I   G++ A+L +GT + + L A+  +++   
Sbjct: 464 VRYPRGSGNGTTIDP--QLDPLPLCKAQICRSGQKTAILAFGTLLHAALDAAEQIDA--- 518

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KPLD A++  +A  HE++IT+EE ++ GG GS V ++  Q G        
Sbjct: 519 --TVVNMRFVKPLDTAVLDEIAAHHELIITIEENAVMGGAGSAVNEYFQQQGR---AANI 573

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + + LPD +IDHG     L+  GL  S I  T+
Sbjct: 574 QMMGLPDYFIDHGDHGQMLSACGLDASGIIDTI 606


>gi|398845183|ref|ZP_10602226.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM84]
 gi|398253837|gb|EJN38951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM84]
          Length = 633

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 310/646 (47%), Positives = 424/646 (65%), Gaps = 34/646 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L+  +L+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPAGLRRLAEADLETLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRNRMLTLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQNSARKSIAVIGDGALTAGMAFEALNHAQEVDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+  +  TLFEELG  YIGP+DGH++  ++A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--APGTLFEELGWNYIGPIDGHDLPTMIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ--SYTTYFAEALIAEAEVDKDVVAIH 423
           +G+  AE     YH + K +PA         +     Y+  F + L   A  D  +V I 
Sbjct: 293 KGFAPAEIDPIGYHAITKLEPADKPAAPKPKKASGPKYSAVFGQWLCDMAAADNRLVGIT 352

Query: 424 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 483
            AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ+
Sbjct: 353 PAMKEGSDLVAFSERFPQRYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRAYDQL 412

Query: 484 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 543
           +HDV +Q L V FA+DRAGLVG DGPTH GS+D++++ C+P M+VM PSDE EL  M++T
Sbjct: 413 IHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYLRCIPGMLVMTPSDENELRKMLST 472

Query: 544 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLA 603
              + + P+  RYPRG G     P      PLE+GKG +  +G +VALL +G  +   L 
Sbjct: 473 -GHLYNGPAAVRYPRGTGPNA--PISGDLDPLEIGKGVVRRQGAKVALLVFGVQLAEALE 529

Query: 604 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQ 662
            +  +++     TV D RF KPLD AL+  LA SHE+L+T+EE +I GG G+ V +FLA 
Sbjct: 530 VAERIDA-----TVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLAS 584

Query: 663 DGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             ++      +PL+   LPD Y++H  PA  LA+ GL  + I A+V
Sbjct: 585 QAVV------KPLLHLGLPDIYVEHAKPAQMLAECGLDAAGIEASV 624


>gi|39995792|ref|NP_951743.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           PCA]
 gi|409911234|ref|YP_006889699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           KN400]
 gi|81703187|sp|Q74FC3.1|DXS1_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|39982556|gb|AAR34016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           PCA]
 gi|298504800|gb|ADI83523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           KN400]
          Length = 637

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 311/620 (50%), Positives = 407/620 (65%), Gaps = 23/620 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLDTI  P  +K +   +L  LA+E+RA ++  VS+TGGHL S+LGV+EL++ALHY F++
Sbjct: 4   LLDTITCPADLKKIPRDQLPALAEEIRAFLLETVSRTGGHLASNLGVVELSIALHYCFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR +WDVGHQ Y HKILTGRRD+ HT RQ  G+SGF KRSES +D F TGHSSTSISA
Sbjct: 64  PTDRFVWDVGHQAYTHKILTGRRDRFHTQRQYGGISGFPKRSESSHDAFDTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMA+ R+L+G  N VVAVIGDG+MT G A+EA+N AG+L  ++IV+LNDN ++S+   
Sbjct: 124 GLGMAMARELRGGSNKVVAVIGDGSMTGGIAFEALNQAGHLKKNLIVVLNDN-EMSIS-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKVDEYARGM 312
                 P VGA SS +SR  +    REL++  +G+ +    IG  + + A + +   +G 
Sbjct: 181 ------PNVGAFSSFVSRKLTGSYFRELKKEVQGLLQNIPAIGKDILQFARRAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +   LFE LG  YIGP+ GHN+  L+ + E  +     GPV++HV+T KG+GY  AE
Sbjct: 235 L--TPGMLFEALGFDYIGPIQGHNLPQLLEVFENARGLD--GPVVVHVMTTKGKGYVPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                +HGV  FD ATGK   S     SYT  F + L   A  ++ +VAI AAM  GTGL
Sbjct: 291 TNPSAFHGVGPFDVATGKTTGSKPGAASYTGIFGDTLAQLARENEKIVAITAAMPDGTGL 350

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F + FP R FDVGIAEQHAVTFAAGLA EG +P  AIYS+F+QRAYDQV HDV LQ L
Sbjct: 351 TGFAKEFPERFFDVGIAEQHAVTFAAGLAAEGFRPVTAIYSTFLQRAYDQVFHDVCLQNL 410

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DR G+VG DGPTH G FD++++  LP M +MAP DE EL HM+ TA +  D P 
Sbjct: 411 PVVFALDRGGVVGDDGPTHHGVFDLSYLRHLPGMTLMAPKDENELRHMLKTAVS-HDGPI 469

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G+ L    + IP  +G G IL EG+ VA++  G  V   L A+  L   G
Sbjct: 470 ALRYPRGAGCGIPLDQELREIP--IGTGEILAEGDDVAIIAIGITVLPALEAARTLAEKG 527

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +R TV +ARF KPLD  +I   A+    +IT EE ++ GGFGS V++ LA +G+    V+
Sbjct: 528 IRATVINARFVKPLDREMILQAARRTGCIITAEENALQGGFGSAVLELLADEGMTG--VR 585

Query: 672 WRPLVLPDRYIDHGSPADQL 691
            + L +PDR+++ G P  QL
Sbjct: 586 VKRLGIPDRFVEQG-PQPQL 604


>gi|421618907|ref|ZP_16059874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri KOS6]
 gi|409779087|gb|EKN58761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri KOS6]
          Length = 632

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/639 (48%), Positives = 422/639 (66%), Gaps = 32/639 (5%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ LS  EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLSEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +RSESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGLAAFPRRSESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPPAPKKPAGPKYSNVFGQWLCDMAAADARLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + PG +  PLE+GK  +  +G + ALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNAAIEPGLE--PLEIGKAVVRRQGSKTALLVFGVQLPEALRVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SH +L+T+EE SI GG GS V +FLA +G+L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAASHALLVTIEENSIMGGAGSAVAEFLAAEGVL--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              RP++   LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 587 ---RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|28867926|ref|NP_790545.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|38372166|sp|Q889Q1.1|DXS_PSESM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|28851162|gb|AAO54240.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 631

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/642 (47%), Positives = 420/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +    +  Y+  F + +   AE D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEADSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G    +       P+E+GKG +  +G+ VA+L +G  +     A
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQGVAILVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  L  TV D RF KPLD AL+R  A SHE+L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 525 EALVVAEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARA 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAI 623


>gi|319943221|ref|ZP_08017504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lautropia mirabilis ATCC
           51599]
 gi|319743763|gb|EFV96167.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lautropia mirabilis ATCC
           51599]
          Length = 631

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 313/629 (49%), Positives = 420/629 (66%), Gaps = 33/629 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  I+ P  ++ LS  +L  LADELR  ++  VS+TGGHL S+LG +ELT+ALHYVF+ 
Sbjct: 12  LLARIDSPADLRGLSREQLPALADELRDYIVNAVSRTGGHLSSNLGTVELTIALHYVFDT 71

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ+YPHKILTGRRD+M T+RQ  GLSGF +R+ESEYD FG GHSSTSI+A
Sbjct: 72  PRDRLVWDVGHQSYPHKILTGRRDQMATLRQYQGLSGFPRRAESEYDTFGVGHSSTSIAA 131

Query: 196 GLGMAV-----GRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQ 249
            +GMAV     G +    +   VAVIGDGAM+AG A+EA+NNAG + D D++VILNDN  
Sbjct: 132 AMGMAVASRNLGENQGPERRRHVAVIGDGAMSAGMAFEALNNAGVMRDVDLLVILNDNDM 191

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
              P          VGA++  L+R+ S RPL + R+VA+ +   +  PM+ELA K++E+A
Sbjct: 192 SISPA---------VGAMNHYLARILSARPLVKARDVARQMLSVVP-PMYELARKLEEHA 241

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GM+  +  TLFEELG  Y GP+DGH++D LV  L+ ++     GP+ +HV+T KG+GY 
Sbjct: 242 KGMLVPA--TLFEELGFTYFGPIDGHDLDALVPTLQNLREMH--GPLFLHVITRKGQGYK 297

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            AE     YHG  KFDPA G +   +  T+ +YT  F++ +   AEV+  +VA+  AM  
Sbjct: 298 LAESDPVLYHGPGKFDPAEGIKRPLTPPTKPTYTQVFSDWVCDMAEVEPRLVAVTPAMRE 357

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+GL  F +RFP R FDVGIAEQHAVTFAAG+AC+GL P  AIYS+F+QRAYDQ++HDV 
Sbjct: 358 GSGLVEFEKRFPQRYFDVGIAEQHAVTFAAGMACDGLVPVVAIYSTFLQRAYDQLLHDVA 417

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPV FA+DR+GLVGADG TH G +D  F+ C+PNMV+MAP+DE E   M+ +A    
Sbjct: 418 LQDLPVVFALDRSGLVGADGATHAGVYDYAFLRCVPNMVIMAPADENECRQMLYSAVRY- 476

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRG G GV +      +P   GK  +  +G+R+A+L +G+ V   + A   L
Sbjct: 477 HAPVAVRYPRGTGPGVLVQKEFTELPR--GKAEVRRQGKRIAILAFGSMVAPAMTAGEAL 534

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
           ++     TV + RF KP+D  LIR LA +H+  +TVEE  + GG GS  ++ LA+ G+  
Sbjct: 535 DA-----TVVNMRFVKPIDADLIRELAATHDAFVTVEEHVVMGGAGSACLEVLAEAGIEK 589

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
             ++   L LPDRYI+HG  A  L   GL
Sbjct: 590 PVLQ---LGLPDRYIEHGEHALLLRLEGL 615


>gi|358636219|dbj|BAL23516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. KH32C]
          Length = 620

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 317/640 (49%), Positives = 412/640 (64%), Gaps = 35/640 (5%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P  PLL  I+ P  ++ L  REL  LA ELR  +I +VSKTGGHL S+LG +ELT+ALHY
Sbjct: 2   PAYPLLQRIDSPADLRRLDRRELHALATELREFLIESVSKTGGHLSSNLGTVELTIALHY 61

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           +FN P+DRI+WDVGHQTY HKILTGRRD M  +R   G+SGF +R ESEYD FGT HSST
Sbjct: 62  IFNTPEDRIVWDVGHQTYGHKILTGRRDAMSGLRHFGGISGFPRRCESEYDTFGTAHSST 121

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQV 250
           SISA LGMAV    +G     +AVIGDGAM+AG A+EA+NNAG + D++++VILNDN ++
Sbjct: 122 SISAALGMAVAARDRGEDRRSIAVIGDGAMSAGMAFEALNNAGDMRDTNLLVILNDN-EM 180

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+         PPVGAL+  L+R+ S       R   + V   +  PM + A KV+E+ +
Sbjct: 181 SIS--------PPVGALTKILARMMSGSTFNAARRAGEKVLG-VAPPMLDFARKVEEHVK 231

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G+I+    TLFEE G +Y GP+DGH++D L+  L+ +   K  GP  +HV+T KG+GY  
Sbjct: 232 GLITPG--TLFEEFGFHYYGPIDGHDLDALIPTLQNLSRLK--GPHFLHVITRKGQGYKL 287

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHGV+KFD   G Q        +YT  F + L   A  D  +V I  AM  G+
Sbjct: 288 AEADPILYHGVSKFDHTAGIQTGKGGGKLTYTQVFGDWLCDMAARDDKLVGITPAMREGS 347

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           G+  F + FP R  DVGIAEQHAVTFAAGLACEG +P  AIYS+F+QRAYDQ++HDV LQ
Sbjct: 348 GMVRFAQEFPDRYHDVGIAEQHAVTFAAGLACEGFRPVVAIYSTFLQRAYDQLIHDVALQ 407

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVGADG TH G+FD++F+ C+PN+VVMAPSDE E   M+ TA    + 
Sbjct: 408 NLPVLFAIDRAGLVGADGATHHGAFDLSFLLCVPNLVVMAPSDENECRQMLYTAYR-HNG 466

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG G+GV   P      L +GKG I   G++ ALL +G+ + + L A+  L++
Sbjct: 467 PTAVRYPRGGGLGVT--PETAMSELPIGKGEIRRRGKKTALLVFGSLLGNALQAAEQLDA 524

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGT 669
                TVA+ RF KPLD  LI  LA SH++L+T+EE + IGG GS V + +        +
Sbjct: 525 -----TVANMRFVKPLDAELIEELAMSHDLLVTIEENAVIGGAGSEVARLVE-------S 572

Query: 670 VKWRPLV----LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +  RP V    LPD ++DHG       Q GL  + I A +
Sbjct: 573 LPQRPRVLRLGLPDHFVDHGDQTQLHEQVGLHTAGIVAAI 612


>gi|422646393|ref|ZP_16709526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330959940|gb|EGH60200.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 631

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/638 (47%), Positives = 418/638 (65%), Gaps = 27/638 (4%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIELT+AL
Sbjct: 11  ERPVTPLLDRADTPEGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIELTIAL 70

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG GHS
Sbjct: 71  HYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFGVGHS 130

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILNDN  
Sbjct: 131 STSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILNDN-D 189

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + +EYA
Sbjct: 190 MSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRTEEYA 240

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG+G+ 
Sbjct: 241 KGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKGKGFA 296

Query: 370 YAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
            AE     YH + K +PA      +       Y+  F + +   A  D  +V I  AM  
Sbjct: 297 PAEVDPIGYHAITKLEPANAPVSIQKKVSAPKYSGVFGQWICDMAAADSRLVGITPAMKE 356

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+VHDV 
Sbjct: 357 GSDLVEFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLVHDVA 416

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T   + 
Sbjct: 417 VQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST-GYLH 475

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           + P+  RYPRG G    +    +  P+E+GKG +  +G+ VA+L +G  +   L  +  L
Sbjct: 476 NGPAAVRYPRGTGPNAVIEADLE--PVEIGKGVVRRQGQGVAILVFGVQLTEALVVAEKL 533

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
           ++     TV D RF KPLD AL+R  A  HE+L+T+EE ++ GG G+ V +FLA+  +L 
Sbjct: 534 DA-----TVIDMRFVKPLDEALVREAAAHHELLVTLEENAVMGGAGAAVSEFLARANILK 588

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 589 SVLH---LGLPDVYVEHAKPAQMLAECGLNAEGIEAAI 623


>gi|217970188|ref|YP_002355422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thauera sp. MZ1T]
 gi|217507515|gb|ACK54526.1| deoxyxylulose-5-phosphate synthase [Thauera sp. MZ1T]
          Length = 622

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 322/645 (49%), Positives = 417/645 (64%), Gaps = 27/645 (4%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P P L+ +  P  ++ L  REL  LA ELRA +I +VSKTGGHL S+LG +ELT+ALH+V
Sbjct: 3   PYPNLERVGCPADVRALDRRELGALASELRAFLIESVSKTGGHLSSNLGTVELTIALHHV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           FN P DRI+WDVGHQTY HK+LTGRR+ M  +R   G+SGF +R ESEYD FGT HSSTS
Sbjct: 63  FNTPHDRIVWDVGHQTYGHKVLTGRREAMTGLRHFGGISGFPRRCESEYDTFGTAHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVS 251
           ISA LGMAV    +G   + +AVIGDGAM+AG A+EA+NNAG +++ +++VILNDN ++S
Sbjct: 123 ISAALGMAVAARARGEDRHAIAVIGDGAMSAGMAFEALNNAGDMENLNLLVILNDN-EMS 181

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
           +         PPVGAL+  L+R+ S       R V + V   +  P+ ELA KV+EYA+G
Sbjct: 182 IS--------PPVGALTKILARMMSGSTYNTARRVGEKVLG-VAPPVAELARKVEEYAKG 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           MI G G TLFEE G +Y GP+DGH++D L+  L+ ++  K  GP  +HV+T KG+GY  A
Sbjct: 233 MI-GPG-TLFEEFGFHYYGPIDGHDLDALIPTLQNLRKLK--GPQFLHVITRKGQGYKLA 288

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E     YHGV+KFD   G Q        +YT  F + L   A+ D  +V I  AM  G+G
Sbjct: 289 EADPVLYHGVSKFDHTAGIQTGKGGGKLTYTQVFGDWLCDMAKADPRIVGITPAMREGSG 348

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F + FP R FDVGIAEQHAVTFAAGLACEG  P  AIYS+F+QRAYDQ++HDV LQ 
Sbjct: 349 LVRFAQEFPERYFDVGIAEQHAVTFAAGLACEGFVPVVAIYSTFLQRAYDQLIHDVALQN 408

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DR GLVGADG TH G+FD++F++C+PNMVVMAPSDE E   M+ TA      P
Sbjct: 409 LPVVFAIDRGGLVGADGATHHGAFDLSFLSCVPNMVVMAPSDEDECRQMLYTAVQ-HAGP 467

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           S  RYPRG G G       + +P  +GKG ++  G  +ALL +G+ +      +  L++ 
Sbjct: 468 SAVRYPRGGGNGTAPRAQMRALP--IGKGEVVRRGRGIALLAFGSLLGVAREVAETLDA- 524

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTV 670
               TVA+ RF KPLD  L+  LA SH++++T+EE + IGG G+ V + +  DGL     
Sbjct: 525 ----TVANMRFVKPLDVELVAELATSHDLIVTLEENAVIGGAGAEVSRLV--DGLATRPR 578

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
             R L LPD +IDHG  A  LA  GL    I A++    G    A
Sbjct: 579 VLR-LGLPDHFIDHGDQAQLLASVGLDQDGILASIARATGAPERA 622


>gi|440742835|ref|ZP_20922157.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP39023]
 gi|440376686|gb|ELQ13349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP39023]
          Length = 630

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/641 (47%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   A+ D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMADADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +       P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIEASLD--PVEIGKGAVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|289672639|ref|ZP_06493529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae FF5]
 gi|424065782|ref|ZP_17803256.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
 gi|440720698|ref|ZP_20901110.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34876]
 gi|440727847|ref|ZP_20908073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34881]
 gi|443641334|ref|ZP_21125184.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas syringae pv.
           syringae B64]
 gi|408002991|gb|EKG43210.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
 gi|440363252|gb|ELQ00422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34881]
 gi|440365068|gb|ELQ02182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae
           BRIP34876]
 gi|443281351|gb|ELS40356.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas syringae pv.
           syringae B64]
          Length = 630

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/641 (47%), Positives = 418/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   A+ D  +V I  A
Sbjct: 293 KGFEPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMADADARLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +    +  P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIEANLE--PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|404493292|ref|YP_006717398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus
           DSM 2380]
 gi|118595596|sp|Q3A3Z6.1|DXS_PELCD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77545349|gb|ABA88911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus
           DSM 2380]
          Length = 634

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 312/642 (48%), Positives = 412/642 (64%), Gaps = 23/642 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L  +  P  +K LS++EL+ LA E+R  +I  VS+TGGHL SSLGV+ELT+ALH+V N 
Sbjct: 3   MLKNLKSPAELKGLSVKELEVLAGEIRTKIIDTVSQTGGHLASSLGVVELTIALHHVLNT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+I+WDVGHQ Y HK+LTGR D+  T+RQ  G+SGF KR ES YD F  GHSSTSISA
Sbjct: 63  PVDKIVWDVGHQAYAHKLLTGRLDRFDTLRQLGGISGFPKREESPYDAFDVGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA  RD K  K   VAVIGDG++T G A+EA+N AG  + ++IVILNDN ++S+   
Sbjct: 123 ALGMAAARDCKNGKEKFVAVIGDGSLTGGMAFEALNQAGDQNKNLIVILNDN-EMSISQN 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAK---GVTKQIGGPMHELAAKVDEYARGM 312
                   VGALSS ++R  ++  +  L++ A+   G   +IG  + ++A K +E  +G 
Sbjct: 182 --------VGALSSLINRKMTSELVVRLKKEAENFLGHVPRIGKDLLKVARKAEESLKGF 233

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
            +     LFE  G  Y+GP++GH ++ L+  LE V N +  GPVL+HVVT KG+G+  AE
Sbjct: 234 FTPG--MLFEAFGFDYVGPLNGHRLETLIPALENVANLE--GPVLVHVVTRKGKGFEPAE 289

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           K    +HGV  FD  TG+   S     S+T  F   L A AE D  +VAI AAM  GTGL
Sbjct: 290 KNPSLFHGVGPFDKETGEVRASKGGPASFTGVFGSTLTAMAEKDDRIVAITAAMLEGTGL 349

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +R+P+R FDVGIAEQHAVTFAAGLAC+G++P  A+YS+F+QRAYD VVHDV LQ+L
Sbjct: 350 KEFSKRYPSRFFDVGIAEQHAVTFAAGLACQGMRPVVALYSTFLQRAYDNVVHDVALQRL 409

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DR GLVGADGPTH G FD +F+  +PNMVV+AP DE EL   + T     D P 
Sbjct: 410 PVTFAIDRGGLVGADGPTHHGVFDYSFLRHIPNMVVIAPRDEIELQRAMLTGTQ-HDGPL 468

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
            +RYPRG  +G+ELP   + +P  +GKG  L +G    +   G   +  L AS +L   G
Sbjct: 469 AYRYPRGKALGLELPDSVESMP--IGKGEKLRDGSDAVIFALGVVCKEALVASDILAGEG 526

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVK 671
           L + V D RF KPLD  L+ + A+   V++TVEE    GGFGS V++ LA +GL    V+
Sbjct: 527 LSVAVVDPRFLKPLDQQLLIAEARRTGVVVTVEENVRQGGFGSAVLEMLADEGL---AVR 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
              + LPDR+I+ G+     A+ GL    IAA+V N +   R
Sbjct: 584 VLRIGLPDRFIEQGTQQQLYARYGLDAEGIAASVRNFMHHDR 625


>gi|66043871|ref|YP_233712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae B728a]
 gi|75503602|sp|Q4ZYU8.1|DXS_PSEU2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|63254578|gb|AAY35674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 630

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/641 (47%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ +G++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKEGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   A+ D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMADADARLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +       PLE+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIEASLD--PLEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|424070487|ref|ZP_17807922.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
 gi|408000493|gb|EKG40846.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
          Length = 630

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/641 (47%), Positives = 418/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   A+ D  +V I  A
Sbjct: 293 KGFEPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMADADARLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +    +  P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIEANLE--PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KP+D AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPMDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|410091964|ref|ZP_11288508.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas viridiflava
           UASWS0038]
 gi|409760707|gb|EKN45831.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas viridiflava
           UASWS0038]
          Length = 631

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 310/642 (48%), Positives = 419/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRANTPDGLRLLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G     +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSDRKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P               Y+  F + L   AE D  +V I  
Sbjct: 293 KGFGPAEVDPIGYHAITKLEPLNAPVAIPKKVSGPKYSGVFGQWLCDMAEADSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  M+ T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKMLNT- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             + + P+  RYPRG G    +    +  P+E+GKG +  +G+ VA+L +G  +     A
Sbjct: 472 GYLHNGPAAVRYPRGTGPNAVIEKDLE--PVEIGKGMVRRQGQGVAILVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  L  TV D RF KPLD AL+R  A +HE+L+T+EE +I GG G+ V +FLA++
Sbjct: 525 EALVVAQKLDATVIDMRFVKPLDEALVREAAANHELLVTLEENAIMGGAGAAVSEFLARE 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    + LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---IGLPDVYVEHAKPAQMLAECGLDAPGIEAAI 623


>gi|422639113|ref|ZP_16702543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae Cit
           7]
 gi|330951507|gb|EGH51767.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae Cit
           7]
          Length = 630

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/641 (47%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   A+ D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMADADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +       P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIEASLD--PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|163857372|ref|YP_001631670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella petrii DSM
           12804]
 gi|229813262|sp|A9ITB0.1|DXS_BORPD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|163261100|emb|CAP43402.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella petrii]
          Length = 627

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 325/634 (51%), Positives = 424/634 (66%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I+ P  ++ L  RELK LA+ELR  V+ +VS+TGGHL S+LG +ELT+ALH VF
Sbjct: 3   TELLDRIHSPDDVRQLDRRELKALAEELRGFVLESVSRTGGHLSSNLGTVELTLALHRVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M ++RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMASLRQEGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   D +++V+LNDN  +S+
Sbjct: 123 SAALGMAVASRNAGIQRQHIAVIGDGAMSAGMAFEAMNNAGVTPDINLLVVLNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + + + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNVGRAMLQHVP-PVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           ++ +  TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT KG GY  AE
Sbjct: 233 VTPA--TLFEEFGFNYVGPIDGHDLDALVPTLQNLKALQ--GLQFLHVVTRKGHGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   ++  +++T  F + L   AE D+ +V I  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQGKASTRKTFTQVFGQWLCDMAERDERLVGITPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F RRFP R FDVGIAEQHAVTFAAGLACEG KP  AIYS+F+QR YDQ++HDV LQ L
Sbjct: 349 VEFERRFPRRYFDVGIAEQHAVTFAAGLACEGQKPVVAIYSTFLQRGYDQLIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ ++ C+PNMVV APSDE E   +++T       P+
Sbjct: 409 DVTFALDRAGLVGADGATHAGNYDIAYLRCVPNMVVAAPSDENEARLLLSTCYEYPG-PA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G E+ PG   +P+  GKG +  +G  +A+L +GT  Q+ LAA+  L++  
Sbjct: 468 SVRYPRGAGRGAEISPGLDTVPM--GKGIVRRQGRGIAILAFGTLTQAALAAAEALDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KP+D  LI  LA  H+ ++TVEE +I GG GS V++ L  +G++   V 
Sbjct: 524 ---TVADMRFVKPIDRELILQLAAGHDAIVTVEEAAIMGGAGSAVIEVLHHEGVV---VP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPDR+IDHG  A  LA  GL  + I  ++
Sbjct: 578 VLQLGLPDRFIDHGDQAALLAGLGLDAAGIERSI 611


>gi|302185470|ref|ZP_07262143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           syringae 642]
          Length = 630

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/641 (47%), Positives = 416/641 (64%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   AE D  +V I  A
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMAEADSRLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P MVVM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMVVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +      +  E+G+G +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIETSLDTV--EIGRGVVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|149928101|ref|ZP_01916348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Limnobacter sp. MED105]
 gi|149823187|gb|EDM82424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Limnobacter sp. MED105]
          Length = 639

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 318/646 (49%), Positives = 419/646 (64%), Gaps = 35/646 (5%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LL  I+ P  ++ LS  +L +LADELR  ++  V+KTGGHL S+LG +ELTVALHYVF
Sbjct: 2   TDLLKKIDCPADLRRLSENQLPKLADELRNYIVEQVAKTGGHLSSNLGTVELTVALHYVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQTYPHKILTGRRD M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 62  NTPNDRVVWDVGHQTYPHKILTGRRDAMPGLRQYGGISGFPKRSESEYDAFGTAHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G     +AVIGDG+MTAG A+EA+NNAG   D D++VILNDN  +S+
Sbjct: 122 SAALGMAVASRNLGVNRKHIAVIGDGSMTAGMAFEALNNAGVTPDIDLLVILNDN-DMSI 180

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L++L S R L  ++EV KG+   +  P++ELA +++E+ +GM
Sbjct: 181 S--------PPVGALNKYLAKLLSGRMLNNVKEVGKGILG-VAPPLYELAHRLEEHVKGM 231

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +S +  TLFEE G  Y GP+DGH++D LV  L+ ++  K  GP+ +HV+T+KG GY  AE
Sbjct: 232 MSPA--TLFEEFGFNYYGPIDGHDLDALVPTLQNLRAMK--GPIFLHVITKKGAGYKLAE 287

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           +    YHG  KFDP+ G Q  ++ +  +YT  F + L   A+ D+ +V I  AM  G+G+
Sbjct: 288 QDPVLYHGPGKFDPSIGIQKSTTPKPPTYTQIFGKWLCDMAQSDRKLVGITPAMREGSGM 347

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F RRFP+R FDVGIAEQHAVTFAAGLACEG+KP  AIYS+F+QRAYDQ++HDV LQ L
Sbjct: 348 VEFERRFPSRYFDVGIAEQHAVTFAAGLACEGMKPVVAIYSTFLQRAYDQLIHDVALQNL 407

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAGLVGADG TH G++D+ ++ C+PNMV+ APS+E E   ++ TA      P 
Sbjct: 408 DVTFALDRAGLVGADGATHAGNYDIAYLRCIPNMVIAAPSNEDECRKLLTTAY---HYPG 464

Query: 553 C--FRYPRGNGIGVELPPGNKGIPLEVGKGRILI---EGE-RVALLGYGTAVQSCLAASA 606
           C   RYPRG G GV          LE+GK  +     E E ++ +L +G+  ++ L A  
Sbjct: 465 CASVRYPRGVGPGVVADESLD--TLEIGKAIVRYSPDESEHKLVILAFGSMCEASLEAGR 522

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGL 665
            L +     TV D R+ KP+D  L++  A+     +TVEEG I GG GS V + L   G 
Sbjct: 523 ALGA-----TVVDMRWVKPIDAELLQRFAEQRYSFVTVEEGCIMGGAGSAVTEHLHAQGF 577

Query: 666 LDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            +  ++   L LPD +IDHG P   L   GL    I  ++    G+
Sbjct: 578 NNAVLQ---LGLPDEFIDHGDPVLLLKNLGLDAQGIETSIKQHYGE 620


>gi|383754045|ref|YP_005432948.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas
           ruminantium subsp. lactilytica TAM6421]
 gi|381366097|dbj|BAL82925.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas
           ruminantium subsp. lactilytica TAM6421]
          Length = 625

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 309/636 (48%), Positives = 414/636 (65%), Gaps = 25/636 (3%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ I     +K+ S+ EL++LA ELR  ++  V++ GGHL  SLG +ELT+AL+ VFN
Sbjct: 5   PLLEKIKEAADVKHYSVSELERLAKELREFIVETVAENGGHLAPSLGTVELTLALYSVFN 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            PKD+++WDVGHQ Y HKILTGRR++ HT+RQ  G++GF  R ES+YD FG GH+STSIS
Sbjct: 65  FPKDKLIWDVGHQAYSHKILTGRRERFHTLRQKGGITGFPNRFESDYDAFGVGHASTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+ RDL GRKN V+AVIGDGA+T G+A+EA+N+AG L   +IVILNDN+      
Sbjct: 125 AALGMAISRDLSGRKNEVIAVIGDGALTGGEAFEALNHAGDLGKKIIVILNDNEM----- 179

Query: 255 ATLDGPIPPVGALSSALSRL----QSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
            ++D     VG LS  LSR+    Q N+  +++  +   +   IG      A  V +  R
Sbjct: 180 -SID---KNVGGLSEYLSRIRITPQYNKAKKDMGSLLMSIP-HIGDKAFRTAQVVKDSVR 234

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
             +   G  +FEELG +YIGPVDGHN+  L  ILE  +  + +GPVLIH+ T KG+GY  
Sbjct: 235 AALVPGG--IFEELGFHYIGPVDGHNISLLQEILESAR--EMSGPVLIHIHTTKGKGYAP 290

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE   DK+HG+ KF+  TGK         SYT+ F++ALI  A+ D ++ AI AAM  GT
Sbjct: 291 AEMEPDKFHGIGKFNKETGKCLPKEG-APSYTSVFSKALIELADKDSNITAITAAMPSGT 349

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F + +P R FDVGIAE+HAVT AAG+A +G  P  A+YS+F QRAYDQ++HDV LQ
Sbjct: 350 GLKAFGQEYPARFFDVGIAEEHAVTLAAGMAADGKHPVVALYSTFAQRAYDQLMHDVCLQ 409

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV   +DRAGLVGADGPTH G+FD++++  +PNM V  P DEAEL  M+ATA  ++  
Sbjct: 410 NLPVTLCLDRAGLVGADGPTHHGAFDLSYLRHMPNMTVFVPKDEAELRDMLATAVKMES- 468

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRGNG GVEL  G   IP   GK  +L +G  VA+L  G      LAA+ LL+ 
Sbjct: 469 PTAVRYPRGNGQGVELQAGFNDIP--AGKAELLRDGSDVAILALGPITYKALAAAKLLQQ 526

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGT 669
            G+   V + RF KPLD  +I+ L +  ++L+TVEE S +GGFGS + ++L   GL   +
Sbjct: 527 QGISAAVVNMRFAKPLDTEMIQRL-RHVQLLVTVEENSLVGGFGSGMAEYLTDSGLAR-S 584

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           V    L LPDR+++ G+  + L    L P  +A  +
Sbjct: 585 VDLLRLGLPDRFVEQGTQEELLTLCSLQPEQMAERI 620


>gi|385330321|ref|YP_005884272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter adhaerens
           HP15]
 gi|311693471|gb|ADP96344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter adhaerens
           HP15]
          Length = 643

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 316/645 (48%), Positives = 426/645 (66%), Gaps = 31/645 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  SQRP TPLLD I+ P  ++ L+  +L +LA ELRA ++++V +TGGH G+ LGV+EL
Sbjct: 9   EIPSQRPNTPLLDRIDEPAQLRELAPEQLTRLARELRAFLLWSVGQTGGHFGAGLGVLEL 68

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVF+ P DR++WDVGHQ YPHKILTGR++ M ++R+  GL+GF KR+ESEYD FG
Sbjct: 69  TVALHYVFDTPSDRLVWDVGHQAYPHKILTGRKESMGSIRRKGGLAGFPKRAESEYDTFG 128

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGAMTAG A+EA+N+AG+L +DM+VILN
Sbjct: 129 VGHSSTSISAALGMAIAARLQQTGRKSIAVIGDGAMTAGMAFEALNHAGHLHADMLVILN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAK 304
           DN  +S+           VG LS+  ++L S+R   ++R+ +K V +  G P +  LA K
Sbjct: 189 DN-DMSISRN--------VGGLSNYFAKLLSSRTYNQVRDSSKKVLQ--GAPHLMALAKK 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +E+ +GMI  +  TLFEELG  YIGP+DGH++  LV  LE ++  +  GP  +HVVT K
Sbjct: 238 TEEHFKGMI--APGTLFEELGFNYIGPIDGHDLPLLVETLENIRELE--GPQFLHVVTTK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPA---TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           G+G+  AE     YH + K +P      +  K   +   Y   F + L   AE D+ VV 
Sbjct: 294 GKGFAPAEADPIGYHAINKIEPVPPSKPEPVKPKPKKPKYANVFGQWLCDSAEQDERVVG 353

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F +RFP R FDV IAEQHAVT AAGLAC+G KP  AIYS+F+QRAYD
Sbjct: 354 ITPAMCEGSDLLAFSQRFPERYFDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYD 413

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNMVVM PSDE E   M+
Sbjct: 414 QLIHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCVPNMVVMTPSDENETRQML 473

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            T   + + P+  RYPRG G G E+    +  PLE+GKGR +  G+ VA+L +GT +   
Sbjct: 474 QT-GMLYEGPASVRYPRGTGPGAEIQ--QELTPLEIGKGRRIRNGKGVAILNFGTLLAPA 530

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           L A+  + +     TVAD RF KPLD  L+  LA+ HE+L+T+EE +I GG GS V +FL
Sbjct: 531 LEAAEAIGA-----TVADMRFVKPLDEELVLELAEQHELLVTLEENAIAGGAGSAVTEFL 585

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               +   T+    L LPD ++DHG   + LA+ GL  + I +++
Sbjct: 586 NSRLV---TMPVLQLGLPDTFMDHGKHGELLAECGLDAAGIESSI 627


>gi|421874464|ref|ZP_16306068.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           GI-9]
 gi|372456508|emb|CCF15617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           GI-9]
          Length = 614

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/627 (48%), Positives = 423/627 (67%), Gaps = 26/627 (4%)

Query: 89  LSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAPKDRILWDVGHQT 148
           ++I +L+QL++E+R  +I N+SKTGGHL  +LGV+ELT+ALHY FN+PKD+ILWDVGHQ 
Sbjct: 1   MTISQLQQLSEEIRRFLIENLSKTGGHLAPNLGVVELTIALHYCFNSPKDKILWDVGHQA 60

Query: 149 YPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR 208
           Y HKILTGR+D   T+RQ  GL GF K +ES +D + TGHSSTS+S  +GMA  RDLK  
Sbjct: 61  YVHKILTGRKDDFPTLRQYKGLCGFPKMAESAHDVWETGHSSTSLSGAMGMASARDLKKE 120

Query: 209 KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALS 268
             +V+ VIGDGA+T G A+EA+N+ G+   ++IV+LNDN ++S+         P VGA+ 
Sbjct: 121 NYHVIGVIGDGALTGGMAFEALNHIGHEKKNVIVVLNDN-EMSIA--------PNVGAMH 171

Query: 269 SALSRLQS----NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM-ISGSGSTLFEE 323
           + L +L++    NR   E+  + K +   +GG + +LA KV +  + M +SG    LFEE
Sbjct: 172 NYLGKLRTDHIYNRAKDEVESLLKAIPA-VGGKLAQLAEKVKDSMKYMLVSG---ILFEE 227

Query: 324 LGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAK 383
           LG  YIGP+DGHN++ ++  L    NT+  GPVL+HV+T+KG+GY  AE+ A K+HG   
Sbjct: 228 LGFTYIGPIDGHNLELVIDSLRTAANTR--GPVLLHVITKKGKGYLPAEQNAMKWHGTDT 285

Query: 384 FDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRC 443
           +   +G+  K+ A   +Y + FA+ LI   + D  +VAI  AM  G+GL  +   +P R 
Sbjct: 286 YKIESGEMIKAVAAAPAYKSVFADTLIKLTQQDDRIVAITPAMPDGSGLLKYASVYPERM 345

Query: 444 FDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGL 503
           FDVGIAEQHA TFAAGLA +G+KPF AIYS+F+QRAYDQ++HDV   KLPV FA+DRAGL
Sbjct: 346 FDVGIAEQHACTFAAGLATQGIKPFLAIYSTFLQRAYDQLIHDVARMKLPVVFAVDRAGL 405

Query: 504 VGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIG 563
           VGADG TH G +D+ FM  +PNMV+MAP DE E+ HM+ TAA  D  P  FRYPRGNG+G
Sbjct: 406 VGADGETHQGVYDIAFMRAIPNMVIMAPKDENEMQHMMKTAAEYDG-PISFRYPRGNGLG 464

Query: 564 VELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFC 623
           V++    K +P  +G+  ++ EG+ VA+L +G        A  LL+ +G+     +ARFC
Sbjct: 465 VKMDEELKALP--IGQMEVVREGKGVAVLSFGHIYDVAEKAINLLQMDGIMPMFVNARFC 522

Query: 624 KPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYI 682
           KPLD  L+  LAK +  ++TVEEG + GGFGS V++F A+ G  +  V+  P+ +PD ++
Sbjct: 523 KPLDEELLLRLAKENMDIVTVEEGCVQGGFGSAVMEFYAEQGYHNMVVE--PMGIPDYFV 580

Query: 683 DHGSPADQLAQAGLTPSHIAATVFNIL 709
           +HGS  +Q  +  LT   IAA V ++L
Sbjct: 581 EHGSVKEQRQEISLTAEAIAARVRSLL 607


>gi|372267534|ref|ZP_09503582.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alteromonas sp. S89]
          Length = 643

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 321/659 (48%), Positives = 422/659 (64%), Gaps = 37/659 (5%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   QRP TPLLD I+ P  ++ LS ++L +LA ELR  +++ V +TGGH G+ LGV+EL
Sbjct: 4   EIPRQRPQTPLLDQIDEPAQLRALSEKQLPELATELREYLLYCVGQTGGHFGAGLGVVEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHY++N P+DR++WDVGHQTYPHKILTGRR++M +MRQ  GLSGF KRSES YD FG
Sbjct: 64  TIALHYIYNTPEDRVVWDVGHQTYPHKILTGRREQMLSMRQQGGLSGFPKRSESPYDTFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+G      +  VVAVIGDGAMTAG A+EA+N+A +   DM+V+LN
Sbjct: 124 VGHSSTSISAALGMALGSP---DERKVVAVIGDGAMTAGMAFEALNHAAHTGKDMLVVLN 180

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN+ +S+           VG L++  +R+ +++    +RE ++ +   I     +LA + 
Sbjct: 181 DNR-MSISKN--------VGGLATYFARILASKTYLNMREGSRKILSAIPKAW-QLARRT 230

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+ +GMI  +  TLFEELG  Y+GP+DGHN+ DLV  L  ++N    GP L+HVVT KG
Sbjct: 231 EEHVKGMI--TPGTLFEELGFNYVGPLDGHNMQDLVHTLRNLRNQP--GPQLLHVVTTKG 286

Query: 366 RGYPYAEKAADKYHGVAKFDP------ATGKQFKSSARTQ--SYTTYFAEALIAEAEVDK 417
           +G+  AE+    YH + K +P      A   +  ++A+ +   Y   F + L   AE D 
Sbjct: 287 KGFGPAEEDPVGYHALNKLEPEPKVQVAVSPEAAATAKKKGPKYQDIFGQWLCDMAEQDD 346

Query: 418 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 477
            +VAI  AM  G+G+  F  RFP R  DV IAEQHAVT AAGLACE  KP  AIYS+F+Q
Sbjct: 347 KLVAITPAMCEGSGMVEFAERFPERYHDVAIAEQHAVTLAAGLACEAQKPVVAIYSTFLQ 406

Query: 478 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 537
           R YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+TFM CLPN+V+ APSDE E 
Sbjct: 407 RGYDQMVHDVAIQDLDVTFAIDRAGLVGEDGPTHAGSFDLTFMRCLPNLVIAAPSDENEC 466

Query: 538 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 597
             ++ TA    + PS  RYPRG G G+E+   N    L VGKGR++ EG  VA+L +GT 
Sbjct: 467 RQLLYTAYQ-HNGPSAVRYPRGTGPGIEIE--NNMTALPVGKGRVVQEGSNVAILSFGT- 522

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHV 656
               L A A   +  L  T+ D R+ KPLD ALI  LA SH++L+T+EE +I GG GS V
Sbjct: 523 ----LLAPAREAAEKLGATLVDMRWVKPLDEALIDRLADSHDLLVTLEENTIAGGAGSAV 578

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
            ++L Q  +    V    L LPD+ I+HG     LA+ GL    I   +     Q   A
Sbjct: 579 SEYLNQRII---PVPLLQLGLPDKIIEHGKHPKLLAEIGLDAKGIEEQIRERQNQMHRA 634


>gi|225025166|ref|ZP_03714358.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC
           23834]
 gi|224942127|gb|EEG23336.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC
           23834]
          Length = 626

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 317/639 (49%), Positives = 418/639 (65%), Gaps = 31/639 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI+YP  ++ L   +L QLA ELR  ++ ++S+TGGH  S+LG +EL VALHYV+
Sbjct: 4   TPLLDTIDYPQDLRRLREDQLPQLAAELRTFLLESISQTGGHFASNLGAVELAVALHYVY 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P D ++WDVGHQ+YPHK+LTGRR++MHTMRQ  GL+GF KRSESEYD FG GHSSTSI
Sbjct: 64  DTPNDHLIWDVGHQSYPHKVLTGRRNRMHTMRQYGGLAGFPKRSESEYDDFGVGHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
            A LGMAV   L G  N  VAVIGDGAMTAGQA+EA+NNAG +D+D++VILNDN ++S+ 
Sbjct: 124 GAALGMAVADKLSGSLNRSVAVIGDGAMTAGQAFEALNNAGDMDTDLLVILNDN-EMSIS 182

Query: 254 TATLDGPIPPVGALSSALSRLQSN---RPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
                   P VGA    L+  Q       LR ++  ++ V  ++ G +H +A KV++  +
Sbjct: 183 --------PNVGAFPKYLAGSQGKDWRDTLRSIKHKSEKVLDKLPGALH-IAQKVEQRLK 233

Query: 311 GMISGSG---STLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
            ++ GS     +LF+  G  Y GPVDGH+V  LVA+L+E+K  K  GP L+HV+T+KG+G
Sbjct: 234 SVLDGSRIRPDSLFDNFGFTYTGPVDGHDVRQLVAVLKEMKQRK--GPQLLHVLTQKGQG 291

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AE     +H V KF+P  G      A   SYT  F + +  +A  D  +VAI  AM 
Sbjct: 292 YKLAENDPVGFHAVGKFNPDQGP-VSGGAAPLSYTQIFGQWVCDQAATDGKLVAITPAMR 350

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            G+GL  F RRFP R FDVGIAEQHAVTFAAGLAC  +KP  AIYS+F+QRAYDQ+VHDV
Sbjct: 351 EGSGLVEFERRFPERYFDVGIAEQHAVTFAAGLACGNIKPVVAIYSTFLQRAYDQLVHDV 410

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            LQ LPV FA+DRAG+VGADGPTH G++D++F+ C+PNMV+ APS   E   +++T  A+
Sbjct: 411 ALQNLPVLFAIDRAGIVGADGPTHAGAYDLSFLRCIPNMVLAAPSSGEECRLLLSTCYAL 470

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
            D P+  RYPRG      +  G   +P  VGKG +  +G   A+L +G+ VQ  L A+  
Sbjct: 471 -DCPTAVRYPRGASGSAVISSGLDTVP--VGKGVVRRQGRETAVLAFGSMVQPALRAAEQ 527

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L+     LTVAD RF KPLD  LI  LA +H+ L+ +EE ++ GG GS V++ LA+    
Sbjct: 528 LD-----LTVADMRFVKPLDEELIADLAATHQRLVCIEENAVQGGAGSAVLEVLAKQ--- 579

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           D  +    L + D    HG PA  L   GL+   +AA +
Sbjct: 580 DCHLPVLLLGIEDIVTGHGDPAILLDDLGLSAEKLAARI 618


>gi|213969290|ref|ZP_03397428.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           T1]
 gi|301381794|ref|ZP_07230212.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tomato Max13]
 gi|302061006|ref|ZP_07252547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tomato K40]
 gi|302130542|ref|ZP_07256532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|213925968|gb|EEB59525.1| deoxyxylulose-5-phosphate synthase [Pseudomonas syringae pv. tomato
           T1]
          Length = 631

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 306/642 (47%), Positives = 419/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATG-KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +    +  Y+  F + +   AE D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPASVQKKVSSPKYSGVFGQWICDMAEADSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G    +       P+E+GKG +  +G+  A+L +G  +     A
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQGAAILVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  +  TV D RF KPLD AL+R  A SHE+L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 525 EALVVAEKMDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARA 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAI 623


>gi|254362650|ref|ZP_04978737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           PHL213]
 gi|452745878|ref|ZP_21945710.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype 6 str. H23]
 gi|153094269|gb|EDN75133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           PHL213]
 gi|452086017|gb|EME02408.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype 6 str. H23]
          Length = 617

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 310/635 (48%), Positives = 414/635 (65%), Gaps = 32/635 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ LS  +L+ + DELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G+I 
Sbjct: 185 N--------VGALNNHLARIFSGSLYTSVRDGSKKILDKV-PTIKNFMKKSEEHMKGVIF 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 SPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYTPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP   +  KS A   +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 294 PIGYHGVPKFDPTAAELPKSKA-APTYSNIFGDWLCEMAERDPKIIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM +MAPSDE E+  M+ TA  + + PS  
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPSDENEMRKMLYTAYTM-NTPSAI 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV+L P  +   LEVGKG I+ EG++VA+L +G      L   A + +    
Sbjct: 472 RYPRGNAKGVKLEPMQR---LEVGKGNIIREGKKVAILNFG-----ALLDEAKIVAEKHN 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD AL++ +A SHE+L+T+EE +I GG GS V ++L   G      K +
Sbjct: 524 YTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFVNEYLQNIG------KIK 577

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATV 705
           PLV+   PD ++   + A+  A  GL    I A +
Sbjct: 578 PLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEAKI 612


>gi|386022368|ref|YP_005940393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           4166]
 gi|327482341|gb|AEA85651.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           4166]
          Length = 632

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 307/639 (48%), Positives = 421/639 (65%), Gaps = 32/639 (5%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +R ESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPPVPKKPAGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + P  +  PLE+GK  +  +G +VALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNASIEPALE--PLEIGKAVVRRQGSKVALLVFGVQLPEALQVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SHE+L+TVEE SI GG GS V +FLA +G+L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVL--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              RP++   LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 587 ---RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|358451416|ref|ZP_09161850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter manganoxydans
           MnI7-9]
 gi|357224649|gb|EHJ03180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter manganoxydans
           MnI7-9]
          Length = 643

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 316/645 (48%), Positives = 427/645 (66%), Gaps = 31/645 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  SQRP TPLLD I+ P  ++ L+  +L +LA ELRA ++++V +TGGH G+ LGV+EL
Sbjct: 9   EIPSQRPNTPLLDRIDEPAQLRELAPEQLTRLARELRAFLLWSVGQTGGHFGAGLGVLEL 68

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVF+ P DR++WDVGHQ YPHKILTGR++ M ++R+  GL+GF KR+ESEYD FG
Sbjct: 69  TVALHYVFDTPSDRLVWDVGHQAYPHKILTGRKESMGSIRRKGGLAGFPKRAESEYDTFG 128

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+      +AVIGDGAMTAG A+EA+N+AG+L +DM+VILN
Sbjct: 129 VGHSSTSISAALGMAIAARLQQTGRKSIAVIGDGAMTAGMAFEALNHAGHLHADMLVILN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAK 304
           DN  +S+           VG LS+  ++L S+R   ++R+ +K V +  G P +  LA K
Sbjct: 189 DN-DMSISRN--------VGGLSNYFAKLLSSRTYNQVRDSSKKVLQ--GAPHLMALAKK 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +E+ +GMI  +  TLFEELG  YIGP+DGH++  LV  LE ++  +  GP  +HVVT K
Sbjct: 238 TEEHFKGMI--APGTLFEELGFNYIGPIDGHDLPLLVETLENIRELE--GPQFLHVVTTK 293

Query: 365 GRGYPYAEKAADKYHGVAKFD---PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           G+G+  AE     YH + K +   P+  +  KS  +   Y   F + L   AE D+ VV 
Sbjct: 294 GKGFAPAEADPIGYHAINKIEPVPPSKPEPVKSKPKKPKYANVFGQWLCDSAEQDQRVVG 353

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F +RFP R FDV IAEQHAVT AAGLAC+G KP  AIYS+F+QRAYD
Sbjct: 354 ITPAMCEGSDLLAFSQRFPERYFDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYD 413

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNMVVM PSDE E   M+
Sbjct: 414 QLIHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCVPNMVVMTPSDENETRQML 473

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            T   + + P+  RYPRG G G E+    +  PLE+GKGR +  G+ VA+L +GT +   
Sbjct: 474 QT-GMLYEGPASVRYPRGTGPGAEIQ--QELTPLEIGKGRRIRNGKGVAILNFGTLLAPA 530

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           L A+  + +     TVAD RF KPLD  L+  LA+ HE+L+T+EE +I GG GS V +FL
Sbjct: 531 LEAAEAIGA-----TVADMRFVKPLDEELVLELAEQHELLVTLEENAIAGGAGSAVTEFL 585

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
               +   T+    L LPD ++DHG   + L + GL  + I +++
Sbjct: 586 NSRLV---TLPVLQLGLPDTFMDHGKHGELLEECGLDAAGIESSI 627


>gi|226944164|ref|YP_002799237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
 gi|226719091|gb|ACO78262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
          Length = 633

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 320/654 (48%), Positives = 426/654 (65%), Gaps = 41/654 (6%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPATPLLDRAATPDRLRQLGEAELEVLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSES YD FG
Sbjct: 67  TIALHYVFDTPGDRLVWDVGHQAYPHKILTGRRERMLTLRQKDGIAAFPRRSESPYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSI A LGMA+   LKG +   +AVIGDGA+TAG A+EA+N+A  + +DM+V+LN
Sbjct: 127 VGHSSTSIGAALGMAIAARLKGERRRCIAVIGDGALTAGMAFEALNHASDVQADMLVVLN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + 
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKILSSRTYASMREGSKNILSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP L+HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLLATLRNMRDLK--GPQLLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ----SYTTYFAEALIAEAEVDKDVVA 421
           +G+  AE     YH + K +P      + SA  Q     Y++ F   L   A  D  +  
Sbjct: 293 KGFAPAEADPIGYHAITKLEP------EGSAPRQPGPPRYSSVFGRWLCDMAAADPRLAG 346

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F +RFP R FDV IAEQHAVT AAG+AC+GLKP  AIYS+F+QRAYD
Sbjct: 347 ITPAMKEGSDLVAFSQRFPERYFDVAIAEQHAVTLAAGMACDGLKPVVAIYSTFLQRAYD 406

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++
Sbjct: 407 QLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRLL 466

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGT 596
            T    +  P+  RYPRG+G    L PG +  PL +GKG +       +G RVALL +G 
Sbjct: 467 TTGYLFEG-PAAVRYPRGSGPNAALEPGLE--PLPIGKGVLRRRSGKSDGPRVALLVFGV 523

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSH 655
            V   L  +  L++     TVAD RF KPLD  L+R LA  HE+L+TVEE SI GG GS 
Sbjct: 524 QVAEALRVAGKLDA-----TVADMRFVKPLDEELVRELAAGHELLVTVEENSIMGGAGSA 578

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           V ++LA+ GLL   +    L LPD Y++H  PA+ LA+ GL  + I A V   L
Sbjct: 579 VAEYLAEAGLLRPLLH---LGLPDYYVEHARPAEMLAECGLDAAGIEAAVCERL 629


>gi|292491350|ref|YP_003526789.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus halophilus Nc4]
 gi|291579945|gb|ADE14402.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus halophilus Nc4]
          Length = 640

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/630 (48%), Positives = 412/630 (65%), Gaps = 37/630 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ I+ P  ++ L   EL+ +A+ELR  ++ +V+++GGHL + LG IELT+ALHYVFN
Sbjct: 8   PLLERIDSPECLRRLPESELEPMAEELRDFLLHSVARSGGHLAAGLGTIELTIALHYVFN 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ YPHK+LTGRR+++ T+RQ  GL+ F  R ES YD FG GHSSTSIS
Sbjct: 68  TPEDRLVWDVGHQAYPHKVLTGRREQLGTIRQAGGLAPFPARHESPYDIFGVGHSSTSIS 127

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    +G     +A+IGDG MTAG AYEA+++AG LD+D++VILNDN+    P 
Sbjct: 128 AALGMAIAAKQRGENRKSIAIIGDGGMTAGMAYEALDHAGALDADLLVILNDNEMSISPN 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGA+SS L+RL S R    +RE +K V + +  PM ELA + +E+ +GM+ 
Sbjct: 188 ---------VGAISSYLTRLLSGRVYSTVREGSKKVLEHMPPPMWELARRTEEHVKGMV- 237

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE+G  Y GP+DGH++  LV  L  +   K +GP L+H+VT KG+GY  AE+ 
Sbjct: 238 -APGTLFEEMGFNYFGPMDGHDLASLVRTLRNLH--KLSGPRLLHIVTRKGKGYTLAEEN 294

Query: 375 ADKYHGVAKFDPATGKQF--KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
              YHGV  FDP  G Q   K  +   SYT  F++ L   A  D  +V I  AM  G+GL
Sbjct: 295 PVTYHGVTPFDPKVGLQHAPKKPSPAVSYTQVFSQWLCDMAAQDAHLVGITPAMREGSGL 354

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F   FP R FDVGIAEQH+VT AAG+AC+GLKP  AIYS+F+QRAYDQ++HDV LQ L
Sbjct: 355 VKFSECFPERYFDVGIAEQHSVTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDVALQNL 414

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAG+VG DGPTH GSFD++++ C+PNMVVMAP+DE E   M+ T   + ++P+
Sbjct: 415 PVLFAIDRAGVVGPDGPTHAGSFDLSYLRCVPNMVVMAPADENECRQMLYTGFLL-EQPA 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV +      +P  VGK  +  EG+ +A+L +G  V   L A+  L++  
Sbjct: 474 AVRYPRGKGPGVAVEAKMTALP--VGKAELKREGQGIAILAFGAMVAPALEAAEKLDA-- 529

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG-----LL 666
              +V + RF KPLD  +I  +A SHE+L+TVE+ +I GG GS V + LA  G     LL
Sbjct: 530 ---SVVNMRFVKPLDENMILEMAMSHELLVTVEDNAIAGGAGSAVNECLANHGIPVPVLL 586

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
            G        LPD Y++HGS  + LA   L
Sbjct: 587 HG--------LPDCYLEHGSREELLAHCHL 608


>gi|313109487|ref|ZP_07795443.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 39016]
 gi|310881945|gb|EFQ40539.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 39016]
          Length = 633

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 314/641 (48%), Positives = 425/641 (66%), Gaps = 28/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   +L+ LADELR  +++ V +TGGH G+ LGV+EL
Sbjct: 13  EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVEL 72

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILT RR+ M T+RQ +GL+ F +R+ESEYD FG
Sbjct: 73  TIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFG 132

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G++   VAVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 133 VGHSSTSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILN 192

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 193 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 242

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 243 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDMK--GPQFLHVVTKKG 298

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K + A G   K +   + Y++ F + L   A  D  ++ I  A
Sbjct: 299 KGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK-YSSVFGQWLCDMAAQDARLLGITPA 356

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++H
Sbjct: 357 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIH 416

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 417 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLLTTGY 476

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    + P  +  P+E+GKG +   G RVALL +G  +     A 
Sbjct: 477 LFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRVALLVFGVQL-----AE 528

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  L  TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA +G
Sbjct: 529 AMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 588

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 589 L---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 626


>gi|114566129|ref|YP_753283.1| deoxyxylulose-5-phosphate synthase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|122318773|sp|Q0AZE2.1|DXS_SYNWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114337064|gb|ABI67912.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 638

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 301/635 (47%), Positives = 424/635 (66%), Gaps = 27/635 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+TIN P  +K LS+ E+ QLA+E+R  ++ +V+K GGHL S+LGV+EL++ALH VF++
Sbjct: 4   ILNTINSPRDLKKLSLPEMTQLANEIRQLLVKSVAKCGGHLASNLGVVELSLALHTVFDS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HKILTGRR++M T+RQ  G+SGF K  ESEYD F TGHSSTSISA
Sbjct: 64  PEDKIIWDVGHQAYVHKILTGRREQMSTLRQYGGISGFPKVEESEYDAFNTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+ RDL+G+ N+VVAVIGDGA+TAG A+EA+N+AG  DSD+IV+LNDN ++S+   
Sbjct: 124 ALGMALARDLQGQSNSVVAVIGDGALTAGMAFEALNHAGQEDSDLIVVLNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG---- 311
                   VGA+S+ L+RL+++      +E  + V  +I G    LA    ++       
Sbjct: 183 --------VGAMSAYLNRLRTDPSYSRTKEEIESVLNRIPGIGPNLARAAGKFKDTVKYL 234

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+ G    +FEELG  YIGPV+GH++ +L A+L  +K  K  GP+L+H +T+KG+GY  A
Sbjct: 235 MVPG---IIFEELGFTYIGPVNGHDLAELKAVLSNIKKMK--GPILLHTITQKGKGYEPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
            +  D +HGV  FD  TG Q K S +T  YT  F + ++ +A+ D  +VAI AAM  GTG
Sbjct: 290 FQKPDIFHGVGPFDVDTGTQLKKSLKT--YTEIFGDFMLNQAQRDNKLVAITAAMTSGTG 347

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F R FP R FDVGI EQHAVT AAG+A  GL+P  A+YS+F+QRAYDQ+VHDV LQK
Sbjct: 348 LSEFSRNFPERFFDVGICEQHAVTLAAGMASSGLRPVVAVYSTFLQRAYDQIVHDVALQK 407

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVG DGPTH G+FD +++  +PN+++MAP+DE EL  M+ +A +++  P
Sbjct: 408 LPVIFAIDRAGLVGEDGPTHHGAFDFSYLRHIPNLIIMAPADENELVDMLHSAFSMEG-P 466

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G GV +    +   LE G+ R++ EG+ +A++  G  V        LL   
Sbjct: 467 VAIRYPRGVGEGVRIKSERQ--LLEPGQSRLIAEGQDLAIIAVGRGVSIARDVVDLLAGK 524

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+   + DARF KPLD  +I   A+ +  L+T+E+ S+ GGFGS + + L ++G+     
Sbjct: 525 GVNPLLVDARFVKPLDRRVIAGAAQKYHRLLTIEDNSLAGGFGSAIGEMLVEEGI---DA 581

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +   + LPD +++HG       Q  + P  I  ++
Sbjct: 582 ELLHIALPDEFVEHGRVELLFEQLNMNPDSILESI 616


>gi|226942934|ref|YP_002798007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
 gi|226717861|gb|ACO77032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azotobacter vinelandii DJ]
          Length = 633

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 319/650 (49%), Positives = 425/650 (65%), Gaps = 41/650 (6%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD    P  ++ L   EL+ LADELR ++++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPATPLLDRAATPDRLRQLGEAELEVLADELRQELLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR++M T+RQ DG++ F +RSES YD FG
Sbjct: 67  TIALHYVFDTPGDRLVWDVGHQAYPHKILTGRRERMLTLRQKDGIAAFPRRSESPYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSI A LGMA+   LKG +   +AVIGDGA+TAG A+EA+N+A  + +DM+V+LN
Sbjct: 127 VGHSSTSIGAALGMAIAARLKGERRRCIAVIGDGALTAGMAFEALNHASDVQADMLVVLN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + 
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKILSSRTYASMREGSKNILSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP L+HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLLATLRNMRDLK--GPQLLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ----SYTTYFAEALIAEAEVDKDVVA 421
           +G+  AE     YH + K +P      + SA  Q     Y++ F   L   A  D  +  
Sbjct: 293 KGFAPAEADPIGYHAITKLEP------EGSAPRQPGPPRYSSIFGRWLCDMAAADPRLAG 346

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F +RFP R FDV IAEQHAVT AAG+AC+GLKP  AIYS+F+QRAYD
Sbjct: 347 ITPAMKEGSDLVAFSQRFPERYFDVAIAEQHAVTLAAGMACDGLKPVVAIYSTFLQRAYD 406

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++
Sbjct: 407 QLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRRLL 466

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGT 596
            T    +  P+  RYPRG+G    L PG +  PL +GKG +       +G RVALL +G 
Sbjct: 467 TTGYLFEG-PAAVRYPRGSGPNAPLEPGLE--PLPIGKGVLRRRSGKSDGPRVALLVFGV 523

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSH 655
            V   L  +  L++     TVAD RF KPLD  L+R LA  HE+L+TVEE SI GG GS 
Sbjct: 524 QVAEALRVAGKLDA-----TVADMRFVKPLDEELVRELAAGHELLVTVEENSIMGGAGSA 578

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           V ++LA+ GLL   +    L LPD Y++H  PA+ LA+ GL  + I A V
Sbjct: 579 VAEYLAEAGLLRPLLH---LGLPDYYVEHARPAEMLAECGLDAAGIEAAV 625


>gi|386817455|ref|ZP_10104673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
 gi|386422031|gb|EIJ35866.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
          Length = 630

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 311/623 (49%), Positives = 416/623 (66%), Gaps = 27/623 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+ IN+P  ++ L +  L  L  ELR  ++ +VS  GGH  S+LG +ELTVALHY F+ 
Sbjct: 1   MLERINFPADLRRLELEALPALCAELREFLLDSVSNGGGHFSSNLGTVELTVALHYAFDT 60

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+++WDVGHQ YPHKILTGRRD M ++RQ DGL+GF KRSESEYD FG GHSSTSISA
Sbjct: 61  PQDKLVWDVGHQAYPHKILTGRRDLMDSIRQKDGLAGFPKRSESEYDTFGVGHSSTSISA 120

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+    KG   + +A+IGDGAMTAG AYEA+N+AG LD+++IV+LNDN ++S+   
Sbjct: 121 ALGMALAAQQKGEDYHSIAIIGDGAMTAGMAYEALNHAGDLDANLIVVLNDN-EMSIS-- 177

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGAL   L+RL S R    +RE  K         + +L    +E+ +GM+  
Sbjct: 178 ------PNVGALRKYLTRLLSGRMYSSMRESGKKALSH-SKSLSKLVKLTEEHMKGMVLP 230

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEE+G  Y GP+DGH+V++LV +LE +K  K  GP L+H++T+KG+GY  AE+  
Sbjct: 231 G--TLFEEMGFKYYGPIDGHDVEELVHVLENLKQIK--GPRLLHILTQKGKGYEPAEEDP 286

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHGV  F+  TG    S   T +YT  F + L   A  DK +V I  AM  G+GL  F
Sbjct: 287 CAYHGVTPFNLKTGLVSSSKKSTPTYTQVFGQWLCDMAAQDKRLVGITPAMREGSGLVAF 346

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             +FP R FDVGIAEQHAVT AAGLACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV 
Sbjct: 347 SEQFPQRYFDVGIAEQHAVTLAAGLACEGLKPVVAIYSTFLQRAYDQLLHDVAIQNLPVV 406

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH G++D++F+ C+PNMVVMAP+DE E   M+ TA  + D P+  R
Sbjct: 407 FAVDRAGLVGADGPTHSGNYDLSFLRCVPNMVVMAPADENECRQMLYTAFQL-DCPTAVR 465

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKG-RILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           YPRG G G+E  P  +   + VGK  ++   G  +A+L +G+ +    AA+  L++    
Sbjct: 466 YPRGKGTGIE--PHTEMQAMPVGKAVKVRNGGNSIAILLFGSLLAEARAAAEELDA---- 519

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ + RF KPLD  ++R LA+SHE+L+T+E+ ++ GG GS V ++L + GL    V+  
Sbjct: 520 -TLVNMRFVKPLDKTILRELAQSHELLVTLEDNAVMGGAGSAVNEYLHEAGL---AVEVM 575

Query: 674 PLVLPDRYIDHGSPADQLAQAGL 696
            L LPD YI+H    +QLA  GL
Sbjct: 576 NLGLPDVYIEHAQREEQLAACGL 598


>gi|333370563|ref|ZP_08462558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desmospora sp. 8437]
 gi|332977572|gb|EGK14342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desmospora sp. 8437]
          Length = 628

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 307/643 (47%), Positives = 420/643 (65%), Gaps = 24/643 (3%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L+ IN P  +K L +REL +LA+E+R  +I ++S TGGHLGS+LGV+ELT+ALHY+F++P
Sbjct: 3   LEQINSPEQLKKLPVRELPRLAEEIRHFLIESLSVTGGHLGSNLGVVELTLALHYLFDSP 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           KDR+LWDVGHQ Y HKILTGRR +  T+RQ  GL GF K +ESE+D + TGHSSTS+SA 
Sbjct: 63  KDRLLWDVGHQAYVHKILTGRRSQFDTLRQYKGLCGFPKMAESEHDIWETGHSSTSLSAA 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTAT 256
           +GMAV RDLKG  + V+ +IGDGA+T G A EA+N+ G    +++VILNDN ++S+    
Sbjct: 123 MGMAVARDLKGEDHRVIPIIGDGALTGGMALEALNHIGNEKRNIMVILNDN-EMSIS--- 178

Query: 257 LDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI---GGPMHELAAKVDEYARGMI 313
                P VGA+ + L +L+++R   +L+E  +   K+I   GG     A ++ +  + ++
Sbjct: 179 -----PNVGAIHNYLGKLRTHRHYHKLKEEVEYFLKKIPSVGGAFATAAERIKDSMKFLV 233

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                 LFE+LG  Y+GPV GHN+D+L+  L     TK  GPVL+HVVT KG+GY  AE 
Sbjct: 234 --VSGVLFEKLGFTYLGPVSGHNLDELMECLRLADQTK--GPVLVHVVTVKGKGYLPAEA 289

Query: 374 AADKYHGVAK-FDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
            A+K+HGV+K +     K+ K     + Y   F + LI  AE DK VV +  AM GG+G+
Sbjct: 290 QAEKFHGVSKGYKLEANKEAKKETPVK-YAKVFGDTLIQLAETDKRVVGVTPAMLGGSGM 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           N F  +FP RCFDVGIAEQHA TFAAGLA +G+KP  AIYS+F+QRAYDQV+HD+  Q L
Sbjct: 349 NEFASKFPDRCFDVGIAEQHAGTFAAGLATQGMKPVLAIYSTFLQRAYDQVIHDIARQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V  A+DRAG VGADG TH G +D+ ++ C+PN+VVM P DE E  HM+ TA   D  P 
Sbjct: 409 NVVLAVDRAGFVGADGETHQGIYDIAYLRCIPNLVVMMPKDENEFRHMLYTAYRTDG-PI 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             R+PRG GIGVE+ P  K +P  +GK  +L EG  VALL +GT V   L A+  L + G
Sbjct: 468 AVRFPRGTGIGVEMDPELKELP--IGKSEVLREGGDVALLAFGTMVPLALEAAERLANEG 525

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +   V + RF KPLD  L+  L      ++T+EEG + GGFGS V+++ +  G  D  V 
Sbjct: 526 VEAKVVNVRFAKPLDTELLDRLKMEGTPVVTIEEGCVSGGFGSAVLEYFS--GREDSGVP 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
            + + +PD +++HG   DQL++ GLT  +I      I+   R+
Sbjct: 584 VQIMGVPDYFVEHGDVNDQLSEVGLTVENIVQNAHQIIADHRQ 626


>gi|339495742|ref|YP_004716035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           17588 = LMG 11199]
 gi|338803114|gb|AEJ06946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           17588 = LMG 11199]
          Length = 632

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 307/639 (48%), Positives = 421/639 (65%), Gaps = 32/639 (5%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +R ESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPPAPKKPTGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + P  +  PLE+GK  +  +G +VALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNASIEPALE--PLEIGKAVVRRQGSKVALLVFGVQLPEALQVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SHE+L+TVEE S+ GG GS V +FLA +G+L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGSHELLVTVEENSVMGGAGSAVAEFLAAEGVL--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              RP++   LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 587 ---RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|145589884|ref|YP_001156481.1| deoxyxylulose-5-phosphate synthase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048290|gb|ABP34917.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 633

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 318/629 (50%), Positives = 416/629 (66%), Gaps = 33/629 (5%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L +IN P  +K L+  EL  LADELR  ++ +VSKTGGHL S+LG +EL++ALHYVF+ P
Sbjct: 3   LHSINSPDDLKKLTREELPALADELRQFILDSVSKTGGHLSSNLGTVELSIALHYVFDTP 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +DRI+WDVGHQ+YPHKILTGRRD+MHT+RQ  GLSGF  RSESE+D FGTGHSSTSISA 
Sbjct: 63  RDRIVWDVGHQSYPHKILTGRRDQMHTLRQFKGLSGFPHRSESEFDAFGTGHSSTSISAA 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTA 255
           +GMA     KG +   VAVIGD AMT G A+EAMNNAG Y D  ++VILNDN  +S+   
Sbjct: 123 MGMARAFQTKGERQVAVAVIGDSAMTGGMAFEAMNNAGVYDDLPLVVILNDN-DMSIS-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGAL+  L+RL S       ++    V   I  P+ E A +++++A+GM+  
Sbjct: 180 ------PAVGALNRHLARLLSGNIYSATKKGIDSVLS-IAPPLREFAKRLEDHAKGMV-- 230

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN--TKTTGPVLIHVVTEKGRGYPYAEK 373
           S ST+F+E G  Y GP+DGH++D L+ +L+ V+    +  GP  +HVVT+KG+GY  AE 
Sbjct: 231 SPSTIFQEFGFNYFGPIDGHDLDALIPMLQNVRRLALEGRGPQFLHVVTKKGQGYELAEA 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG +KFDP  G + KS    +++T  F E L   A  D  +V I  AM  G+GL 
Sbjct: 291 DPVLYHGPSKFDPEQGVK-KSLTSKKTFTQVFGEWLCDMAHADPLLVGITPAMREGSGLV 349

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 350 DFEKNFPKRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQDLP 409

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM+VM P+DEAE   ++ TA      PS 
Sbjct: 410 VLFALDRAGLVGADGATHAGAYDIPFLRCIPNMLVMTPADEAECRDLLTTAFH-QPHPSA 468

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALL 608
            RYPRG+G+G       + +PL  GKG I  +     GERVA+L +GT     L  SAL 
Sbjct: 469 VRYPRGSGVGTIPSTELRTVPL--GKGEIRRQSTAPSGERVAILAFGT-----LLYSALE 521

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
            + G+  +VA+ RF KPLD  LI+SLA  H+  +TVE+G+I GG GS  ++ L+    LD
Sbjct: 522 VAEGINASVANMRFVKPLDVDLIKSLAADHDYFVTVEDGAIQGGAGSACLEALSA---LD 578

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
                  L LPD +++HG     + + GL
Sbjct: 579 IHKPLLQLGLPDVFVEHGDYQLLMTKCGL 607


>gi|15599239|ref|NP_252733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAO1]
 gi|107103558|ref|ZP_01367476.1| hypothetical protein PaerPA_01004628 [Pseudomonas aeruginosa PACS2]
 gi|116052081|ref|YP_789075.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889675|ref|YP_002438539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           LESB58]
 gi|254236933|ref|ZP_04930256.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa C3719]
 gi|254242727|ref|ZP_04936049.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 2192]
 gi|296387399|ref|ZP_06876898.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAb1]
 gi|355639276|ref|ZP_09051078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. 2_1_26]
 gi|386056963|ref|YP_005973485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           M18]
 gi|386068146|ref|YP_005983450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|392982229|ref|YP_006480816.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           DK2]
 gi|416859068|ref|ZP_11913666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           138244]
 gi|416877743|ref|ZP_11919958.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           152504]
 gi|418588460|ref|ZP_13152471.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|418592657|ref|ZP_13156523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|419756861|ref|ZP_14283206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|420137640|ref|ZP_14645605.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CIG1]
 gi|421158076|ref|ZP_15617374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 25324]
 gi|421168155|ref|ZP_15626264.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 700888]
 gi|421172687|ref|ZP_15630452.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CI27]
 gi|421178783|ref|ZP_15636386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa E2]
 gi|421518593|ref|ZP_15965267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAO579]
 gi|451982673|ref|ZP_21930977.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas aeruginosa
           18A]
 gi|13124137|sp|Q9KGU7.1|DXS_PSEAE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|122261229|sp|Q02SL1.1|DXS_PSEAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|226740158|sp|B7V7R4.1|DXS_PSEA8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|9664861|gb|AAF97240.1|AF282878_1 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas aeruginosa]
 gi|9950240|gb|AAG07431.1|AE004821_4 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa PAO1]
 gi|115587302|gb|ABJ13317.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168864|gb|EAZ54375.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa C3719]
 gi|126196105|gb|EAZ60168.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa 2192]
 gi|218769898|emb|CAW25659.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           LESB58]
 gi|334838830|gb|EGM17535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           138244]
 gi|334839218|gb|EGM17910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           152504]
 gi|347303269|gb|AEO73383.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           M18]
 gi|348036705|dbj|BAK92065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|354832131|gb|EHF16132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. 2_1_26]
 gi|375040747|gb|EHS33485.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|375048529|gb|EHS41050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|384396616|gb|EIE43034.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|392317734|gb|AFM63114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           DK2]
 gi|403249616|gb|EJY63107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CIG1]
 gi|404348075|gb|EJZ74424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PAO579]
 gi|404531450|gb|EKA41404.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 700888]
 gi|404537377|gb|EKA46980.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           CI27]
 gi|404547881|gb|EKA56861.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa E2]
 gi|404550012|gb|EKA58820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 25324]
 gi|451759675|emb|CCQ83500.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas aeruginosa
           18A]
 gi|453043258|gb|EME90990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA21_ST175]
          Length = 627

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 314/641 (48%), Positives = 425/641 (66%), Gaps = 28/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   +L+ LADELR  +++ V +TGGH G+ LGV+EL
Sbjct: 7   EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILT RR+ M T+RQ +GL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G++   VAVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDMK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K + A G   K +   + Y++ F + L   A  D  ++ I  A
Sbjct: 293 KGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK-YSSVFGQWLCDMAAQDARLLGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++H
Sbjct: 351 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 411 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    + P  +  P+E+GKG +   G RVALL +G  +     A 
Sbjct: 471 LFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRVALLVFGVQL-----AE 522

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  L  TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA +G
Sbjct: 523 AMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620


>gi|422659618|ref|ZP_16722042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M302278]
 gi|331018235|gb|EGH98291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           lachrymans str. M302278]
          Length = 631

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 419/642 (65%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   + P TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRECPVTPLLDQADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + ++M+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAANMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYTSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P       +    +  Y+  F + +   AE D  +V I  
Sbjct: 293 KGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSPKYSGVFGQWICDMAEADSRLVGITP 352

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ+V
Sbjct: 353 AMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLV 412

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P +VVM PSDE EL  +++T 
Sbjct: 413 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGIVVMTPSDENELRKLLST- 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
             +   P+  RYPRG G    +       P+E+GKG +  +G+ VA+L +G  +     A
Sbjct: 472 GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGKGVVRRQGQGVAILVFGVQL-----A 524

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
            AL+ +  L  TV D RF KPLD AL+R  A SHE+L+T+EE ++ GG G+ V +FLA+ 
Sbjct: 525 EALVVAEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVGEFLARA 584

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +L   +    L LPD Y++H  PA  LA+ GL    I A +
Sbjct: 585 NILKSVLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAI 623


>gi|431925835|ref|YP_007238869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri RCH2]
 gi|431824122|gb|AGA85239.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri RCH2]
          Length = 632

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 305/639 (47%), Positives = 422/639 (66%), Gaps = 32/639 (5%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPTTPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ +GL+ F +RSESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKEGLAAFPRRSESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L A A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPVKPKKPSGPKYSNVFGQWLCAMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + PG +  PLE+GK  +  +G ++ALL +G  +   +     L++
Sbjct: 477 PAAVRYPRGSGPNAAIEPGLE--PLEIGKAVVRRQGSKIALLVFGVQLPEAMQVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SHE+L+TVEE SI GG GS V +FL  + +L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLTGESIL--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              +PL+   LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 587 ---KPLLHLGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|225077244|ref|ZP_03720443.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
           NRL30031/H210]
 gi|224951388|gb|EEG32597.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
           NRL30031/H210]
          Length = 629

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 310/635 (48%), Positives = 418/635 (65%), Gaps = 33/635 (5%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+PLLD I+ P  ++ L  ++L Q+A ELR  ++ +V KTGGH  S+LG +ELTVALHYV
Sbjct: 3   PSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           +N P+D+++WDVGHQ+YPHKILTGR+++MHTMRQ  GL+GF KR ESEYD FG GHSSTS
Sbjct: 63  YNTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRCESEYDAFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           I A LGMAV     G     VA+IGDGAMTAGQA+EA+N AG +D D++VILNDN+    
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           P     G +P    L+S + R   +  L  ++  +  V  ++ G M ELA KV+   + +
Sbjct: 183 PNV---GALPKY--LASNVVR-DMHGLLSTIKAQSSKVLDKLPGAM-ELAQKVENKIKTL 235

Query: 313 I-----SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
                 +    +LFE  G  Y GPVDGHNV++LV +L++++  K  GP L+HV+T+KG G
Sbjct: 236 AGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRGRK--GPQLLHVITKKGNG 293

Query: 368 YPYAEKAADKYHGVAKF-DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           Y +AE    KYH VAK        + K +A   +YT  F + L  +A  D+ +VAI  AM
Sbjct: 294 YKFAENDPVKYHAVAKLPSEVPAPEVKPAAAKPTYTQVFGQWLCDQAAADERLVAITPAM 353

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             G+GL  F ++FP R FDVGIAEQHAVTFA GLACEG+KP  AIYS+F+QRAYDQ+VHD
Sbjct: 354 REGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHD 413

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V LQ LPV FA+DRAG+VGADGPTH G +D++F+ C+PNM+V APSDE E   +++T   
Sbjct: 414 VALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCIPNMIVAAPSDENECRLLLSTCYQ 473

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            +  PS  RYPRG G G  +  G + +  E+GKG I  EGE++A++ +G+ V     A +
Sbjct: 474 ANS-PSAVRYPRGTGTGATISDGLETV--EIGKGIIRREGEKIAVIAFGSMV-----APS 525

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGL 665
           L  ++ L  TVAD RF KP+D  LI  LA+SH+ ++T EE +  GG GS V++ LA+ G+
Sbjct: 526 LTAADKLNATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSAVLEVLAKHGI 585

Query: 666 LDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLT 697
                  +P++L    D+  +HG P   LA  GL 
Sbjct: 586 C------KPVLLLGVEDKVTEHGDPKKLLADLGLN 614


>gi|419839194|ref|ZP_14362612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           HK386]
 gi|386909905|gb|EIJ74569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           HK386]
          Length = 621

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 304/636 (47%), Positives = 413/636 (64%), Gaps = 26/636 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG + +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENASRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 184 N--------VGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K + +  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPISGELPKHNTKP-TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSQRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P      L +GK R++ EG+++A+L +GT + S L AS  L +    
Sbjct: 471 RYPRGNAIGVELTPLEM---LPIGKSRLIREGQKIAILNFGTLLPSALEASEKLNA---- 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 524 -TVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 580

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            L LPD +I   +  + L   GL    I   + N +
Sbjct: 581 -LGLPDYFIPQATQQEALKDLGLDSKGIEEKILNFV 615


>gi|342904303|ref|ZP_08726104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21621]
 gi|341953543|gb|EGT80047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21621]
          Length = 643

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 414/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 27  PLLSLINSPEDLRLLNKEQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 86

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 87  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 146

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG + +DM+VILNDN ++S+  
Sbjct: 147 AGLGIAVTAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISE 205

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 206 N--------VGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMF 256

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 257 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 314

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K + +  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 315 PIGFHGVPKFDPISGELPKHNTKP-TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVE 373

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 374 FSQRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 433

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 434 LFAIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 492

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P      L +GK R++ EG+++A+L +GT + S L A+  L +    
Sbjct: 493 RYPRGNAIGVELTPLEM---LPIGKSRLIREGQKIAILNFGTLLPSALEAAEKLNA---- 545

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 546 -TVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 602

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + L   GL    I   + N + +
Sbjct: 603 -LGLPDYFIPQATQQEALKDLGLDSKGIEEKILNFIAK 639


>gi|153872363|ref|ZP_02001280.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS]
 gi|152071171|gb|EDN68720.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS]
          Length = 619

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 306/625 (48%), Positives = 414/625 (66%), Gaps = 30/625 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ I  P  ++ L   +L QLA ELR  ++  +S+TGGH  S+LGV+ELT+ALHY+FN 
Sbjct: 5   LLEQIETPQELRALPEHDLPQLAIELRHFLVETLSRTGGHFASNLGVVELTIALHYIFNT 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ+YPHKILT RR+ M T+RQT+G++GF KR ES YD FG GHSSTSISA
Sbjct: 65  PEDRLVWDVGHQSYPHKILTKRREAMSTLRQTNGIAGFPKRRESIYDTFGVGHSSTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+          VVA+IGDGAMTAG A+EA+N+AG +D++++VILNDN        
Sbjct: 125 ALGMAIANHQLDSNRKVVAIIGDGAMTAGMAFEALNHAGDMDTNILVILNDN-------- 176

Query: 256 TLDGPIPP-VGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
             D  I P VG LS+  +++ S++    +RE +K + +++   + ELA + +E+ +GM++
Sbjct: 177 --DMSISPNVGGLSNYFAKILSSQLYTSMREGSKHLLERMP-TVRELAKRTEEHVKGMVA 233

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKT-TGPVLIHVVTEKGRGYPYAEK 373
               TLFEELG  YIGP+DGH   DL  +L  +KN +   GP  +H++T+KG+G+P AE 
Sbjct: 234 PG--TLFEELGFNYIGPIDGH---DLPLLLSTLKNMRVLEGPQFLHIITQKGKGFPSAED 288

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV+ FDP TG+    S    +YT  F++ L   A  D+ ++ I  AM  G+GL 
Sbjct: 289 DPCVYHGVSAFDPKTGQMESKSTDAPTYTKIFSDWLCDMAAHDERLIGITPAMREGSGLV 348

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F   FP R FDVGIAEQH+VT AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 349 DFSTLFPDRYFDVGIAEQHSVTLAAGIACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLP 408

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADGPTH GSFD+ ++  +PNM++MAP+DE E   M  T    +  PS 
Sbjct: 409 VLFAIDRAGLVGADGPTHAGSFDLAYLRSIPNMLIMAPADENECRQMFTTGFQYEG-PSA 467

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+GV + P    +P  + + ++  +GE+VALL +GT     L A AL  +  L
Sbjct: 468 VRYPRGCGVGVPVMPKLTTLP--IAQAQLRRQGEQVALLVFGT-----LLAMALEAAEQL 520

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KPLD  +I  +AK H++L+TVEE  I GG GS V ++L    L    +  
Sbjct: 521 NATVVNMRFVKPLDVEMITQMAKQHKLLVTVEENVIMGGAGSAVNEYLQTKALSTPVLN- 579

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLT 697
             L LPDR+++HG     LAQ GL+
Sbjct: 580 --LGLPDRFLEHGDTTTLLAQCGLS 602


>gi|169831189|ref|YP_001717171.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|229813271|sp|B1I3J6.1|DXS_DESAP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169638033|gb|ACA59539.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 634

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 312/634 (49%), Positives = 415/634 (65%), Gaps = 26/634 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD I++   ++ L+  +L +LA ELR  ++  VS+TGGHL  +LGV+ELT+ALHYVF A
Sbjct: 3   LLDGISHLTDLRALTPDQLDELAAELRDLIVSTVSRTGGHLAPNLGVVELTLALHYVFRA 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DRI+WDVGHQ Y HKILTGR+ + HT+RQ +GLSGF  R+ESEYDCFGTGHSSTSISA
Sbjct: 63  PDDRIVWDVGHQCYVHKILTGRKSQFHTLRQFEGLSGFPNRNESEYDCFGTGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+ RDL G   NVVAVIGDGA++ G A+EA+N AG+L   +IV+LNDN ++S+   
Sbjct: 123 ALGMALARDLSGEDRNVVAVIGDGALSGGMAFEALNQAGHLGCRLIVVLNDN-EMSIARN 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG--GP--MHELAAKVDEYARG 311
                   VGA++  LSRL+++      ++  + + ++I   GP  +  +    D     
Sbjct: 182 --------VGAMARYLSRLRTDPMYSRSKDEVESLLRRIPAIGPRVLGWIERIKDSLKYL 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           +++G    LFEELG  Y+GP+DGHN+  ++ +  + +  +  GPVL+HV+T+KG+GY  A
Sbjct: 234 VVAG---MLFEELGFTYLGPIDGHNIPAMLNVFRQAQAVE--GPVLVHVLTKKGKGYAPA 288

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EK  DK+HGV  FDPATG    + AR  S+T  F   L+  AE D  ++AI AAM  GTG
Sbjct: 289 EKNPDKFHGVGPFDPATGNT-PTDARV-SFTEVFGRTLVQLAEADSRILAITAAMTSGTG 346

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F RRFP R FDVGIAEQHAVT AAGLA EG +P  AIYS+F+QRAYDQV+HDV LQK
Sbjct: 347 LGPFSRRFPQRFFDVGIAEQHAVTLAAGLAVEGYRPVVAIYSTFLQRAYDQVLHDVCLQK 406

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DR G+VG DG TH G FD +F+  +PN+V+MAP DE E  HM+ TA    + P
Sbjct: 407 LPVVFALDRGGIVGEDGVTHQGVFDFSFLRPVPNLVMMAPKDENEFQHMLKTAVE-HEGP 465

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G G  L      +P  +G+  +L EG+ + L+  G  V + + A+ +L   
Sbjct: 466 IAVRYPRGTGTGCALDQDLVALP--IGRAEVLREGDDITLIAIGNMVPTAVKAAEILAER 523

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+  +V +ARF KPLD   I   A+    LIT+EE  I GGFGS V + L   GL D  V
Sbjct: 524 GIEASVVNARFVKPLDEKCICHYARRTGRLITLEENVIAGGFGSAVQELLVAKGLTD--V 581

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 704
           + + + LPD +I+HG+P    A+ GLT   +  T
Sbjct: 582 RVQLIGLPDVFIEHGAPHLLRAKYGLTVDRVVRT 615


>gi|222056744|ref|YP_002539106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
 gi|221566033|gb|ACM22005.1| deoxyxylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
          Length = 636

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 312/638 (48%), Positives = 412/638 (64%), Gaps = 23/638 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+ IN P  +K L   EL  LA E+R  ++  VS+TGGHL S+LG +ELT+ALHY FN+
Sbjct: 4   ILNRINSPADLKTLKEDELLLLAGEIRQFLLDTVSRTGGHLASNLGCVELTLALHYCFNS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D I+WDVGHQ Y HKILTGRRD  HT RQ  G+SGF KRSES +D FG GHSSTSISA
Sbjct: 64  PSDSIIWDVGHQAYTHKILTGRRDVFHTQRQYQGISGFPKRSESAHDAFGAGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV   LKG  + V+AVIGDG++T G A+EA+N AG+L  +++V+LNDN ++S+   
Sbjct: 124 GLGMAVANCLKGDPSKVIAVIGDGSLTGGMAFEALNQAGHLRKNLVVVLNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI---GGPMHELAAKVDEYARGM 312
                   VGALS+ +SR  +    R+L++  + + + I   GG +   A K +   +G 
Sbjct: 183 --------VGALSTFISRKLTGNYYRDLKKEMQRLLQNIPAIGGNILHFARKAENSLKGF 234

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           ++    TLFE LG  YIGPV GH++  L+ I++ V++ +  GPVL+HVVT KG+GY  AE
Sbjct: 235 LTPG--TLFEALGFEYIGPVHGHDLPQLIEIMQNVRSLE--GPVLVHVVTTKGKGYQPAE 290

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
              DK+HGV  FD  TGK         SYT  F + L   AE D+ +VAI AAM  GTGL
Sbjct: 291 DTPDKFHGVGPFDIKTGKVTGGKPGAASYTGIFGDTLCKLAEEDEKIVAITAAMPDGTGL 350

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F R FP R FDVGIAEQHA+TFAAG+A EG +P  AIYS+F QRAYDQ+ HD+ LQKL
Sbjct: 351 TKFSRTFPDRFFDVGIAEQHALTFAAGMATEGFRPVAAIYSTFAQRAYDQIFHDICLQKL 410

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DRAGLVG DGPTH G FD++++  LP M VMAP DE EL HM+ T A   D+P 
Sbjct: 411 PVTLALDRAGLVGDDGPTHHGVFDLSYLRHLPEMTVMAPKDENELQHMLKT-AIYSDQPI 469

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV +    K IPL V +   L +GE + L+  G+ V   + A+  L++ G
Sbjct: 470 ALRYPRGAGYGVAMDSILKTIPLGVAEQ--LAKGEDITLIAIGSTVYPAMEAAEQLKAKG 527

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           ++  V +ARF KPLD  LI S A     ++TVEE ++ GGFG+ +++ L+ +G     +K
Sbjct: 528 IKACVINARFVKPLDRNLILSAAGRSGCVVTVEENALQGGFGTAIMELLSDEG---AGIK 584

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            + + +PDR+I+ GS A      GL  + IA    + L
Sbjct: 585 VKRIGIPDRFIEQGSQAQLRKDLGLDAAGIAQVAEDFL 622


>gi|424939077|ref|ZP_18354840.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCMG1179]
 gi|346055523|dbj|GAA15406.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas aeruginosa
           NCMG1179]
          Length = 627

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 313/641 (48%), Positives = 424/641 (66%), Gaps = 28/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   +L+ LADELR  +++ V +TGGH G+ LGV+EL
Sbjct: 7   EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++WDVGHQ YPHKILT RR+ M T+RQ +GL+ F +R+ESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLRQKNGLAAFPRRAESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G++   VAVIGDGA+TAG A+EA+N+A  +D+DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIAARLQGKERKSVAVIGDGALTAGMAFEALNHASEVDADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISHN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  LVA L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLVATLRNMRDMK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K + A G   K +   + Y++ F + L   A  D  ++ I  A
Sbjct: 293 KGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK-YSSVFGQWLCDMAAQDARLLGITPA 350

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++H
Sbjct: 351 MKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIH 410

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  ++ T  
Sbjct: 411 DVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYLRCIPGMLVMTPSDEDELRKLLTTGY 470

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
             D  P+  RYPRG+G    + P  +  P+E+GKG +   G RVALL +G  +     A 
Sbjct: 471 LFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRVALLVFGVQL-----AE 522

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           A+  +  L  TV D RF KPLD  L+R LA SHE+L+T+EE ++ GG GS V +FLA +G
Sbjct: 523 AMKVAESLDATVVDMRFVKPLDETLVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEG 582

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 583 L---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620


>gi|334131671|ref|ZP_08505433.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methyloversatilis
           universalis FAM5]
 gi|333443144|gb|EGK71109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methyloversatilis
           universalis FAM5]
          Length = 618

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 309/633 (48%), Positives = 415/633 (65%), Gaps = 27/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+TI+ P  ++ L  R+L QLA ELRA ++ +VS+TGGHL S+LG +ELTVALH+V+N
Sbjct: 5   PLLETIDSPATVRALDGRQLAQLATELRAFLLESVSRTGGHLSSNLGTVELTVALHHVYN 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DRI+WDVGHQTY HK+LTGRR+ M T+RQ  G+SGF +R ESEYD FGT HSSTSIS
Sbjct: 65  TPHDRIVWDVGHQTYAHKVLTGRREGMATLRQYKGVSGFPRRCESEYDTFGTAHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMAV     G++ + +AVIGDGAMTAG A+EA+NNAG  D+D++VILNDN  +S+  
Sbjct: 125 AALGMAVAAKALGQRRHSIAVIGDGAMTAGMAFEALNNAGVEDADLLVILNDN-DMSIS- 182

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     R     V  ++   + E A + +E+ +GMI 
Sbjct: 183 -------PPVGALNKYLTRLLSGQTYNAARRAGAKVL-ELAPSLREFAKRAEEHVKGMI- 233

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE G +Y GP+DGH++D L+  LE ++  +  GP  +HV+T+KG GY  AE  
Sbjct: 234 -TPGTLFEEFGFHYYGPIDGHDLDALIPTLENLR--ELPGPKFLHVITKKGYGYKLAEAD 290

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFD   G Q        +YT  F + L   A     ++A+  AM  G+G+  
Sbjct: 291 PILYHGVGKFDHVAGIQTGKGGGKLTYTQVFGDWLCDMAARCDKLMAVTPAMREGSGMVR 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F   +P R FDVGIAEQHA+TFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 351 FAEEYPKRYFDVGIAEQHALTFAAGMACEGVKPVVAIYSTFLQRAYDQLIHDVCLQNLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
             A+DRAGLVGADG TH G+FD++++ CLPN+VVM PSDE E   M+ T A + + PS  
Sbjct: 411 MMALDRAGLVGADGATHHGAFDLSYLLCLPNIVVMTPSDENECRQMLYT-AYLHEGPSAV 469

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQSCLAASALLESNGL 613
           RYPRG+G GV   P      +E+G+G +   GE   ALL +G  +   LA +   ++   
Sbjct: 470 RYPRGSGPGV--VPQQDMTAIEIGRGELRRAGEGDAALLAFGAMLTPALAVADEFDA--- 524

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKW 672
             +VA+ RF KPLD AL+  LA  H +++T+EE + IGG GS V + +   GL   + + 
Sbjct: 525 --SVANMRFAKPLDEALVLELASKHRLIVTLEENALIGGAGSEVERVIHNAGL---SCRV 579

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             + LPDR++DHG P+   A+ GL  + + A V
Sbjct: 580 LRIGLPDRFVDHGDPSLLYAEVGLDAAGVRAQV 612


>gi|261493236|ref|ZP_05989763.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496521|ref|ZP_05992901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307724|gb|EEY09047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311086|gb|EEY12262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 617

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 309/635 (48%), Positives = 412/635 (64%), Gaps = 32/635 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ LS  +L+ + DELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIHPFPWREESPYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G+I 
Sbjct: 185 N--------VGALNNHLARIFSGSLYTSVRDGSKKILDKV-PTIKNFMKKSEEHMKGVIF 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 SPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYTPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP   +  KS A   +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 294 PIGYHGVPKFDPTAAELPKSKA-APTYSNIFGDWLCEMAERDPKIIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM +MAPSDE E+  M+ TA  + + PS  
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPSDENEMRQMLYTAYTM-NTPSAI 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV+L P      LEVGK  I+ EG++VA+L +G      L   A + +    
Sbjct: 472 RYPRGNAKGVKLEPMQG---LEVGKANIIREGKKVAILNFG-----ALLDEAKIVAEKHN 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD AL++ +A SHE+L+T+EE +I GG GS V ++L   G      K +
Sbjct: 524 YTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFVNEYLQNIG------KIK 577

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATV 705
           PLV+   PD ++   + A+  A  GL    I A +
Sbjct: 578 PLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEAKI 612


>gi|373467319|ref|ZP_09558618.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sp. oral taxon
           851 str. F0397]
 gi|371758854|gb|EHO47610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sp. oral taxon
           851 str. F0397]
          Length = 625

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 414/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKEQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG + +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K + +  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKHNTKP-TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P      L +GK R++ EG+++A+L +GT + S L A+  L +    
Sbjct: 475 RYPRGNAIGVELTPLEI---LPIGKSRLIREGQKIAILNFGTLLPSALEAAGKLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     +++ 
Sbjct: 528 -TVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQFG 586

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
              LPD +I   +  + L   GL    I   + N + +
Sbjct: 587 ---LPDYFIPQATQQEALKDLGLDSKGIEEKILNFIAK 621


>gi|146284018|ref|YP_001174171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri
           A1501]
 gi|166201531|sp|A4VQS8.1|DXS_PSEU5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145572223|gb|ABP81329.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas stutzeri A1501]
          Length = 632

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 307/639 (48%), Positives = 419/639 (65%), Gaps = 32/639 (5%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +R ESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPPAPKKPTGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPDRYFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + P  +  PLE+GK  +   G +VALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNASIEPALE--PLEIGKAVVRRRGSKVALLVFGVQLPEALQVGDALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SHE+L+TVEE SI GG GS V +FLA +G+L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVL--- 586

Query: 670 VKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              RP++   LPD Y++H  P++ LA+ GL  + I   V
Sbjct: 587 ---RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEVAV 622


>gi|333901951|ref|YP_004475824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fulva 12-X]
 gi|333117216|gb|AEF23730.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fulva 12-X]
          Length = 628

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 307/642 (47%), Positives = 416/642 (64%), Gaps = 28/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  N P  ++ L   EL+ LADELR  +++ V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPLTPLLDRANTPDELRRLGEAELETLADELRQYLLYTVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVF+ P+DR++WDVGHQ YPHKILTGRR++M ++RQ DG++ F +RSESEYD FG
Sbjct: 67  TVALHYVFDTPEDRLVWDVGHQAYPHKILTGRRERMGSLRQKDGIAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+    +G K   VAVIGDGA+TAG A+EA+N+A  + ++M+V+LN
Sbjct: 127 VGHSSTSISAALGMAIAAQRQGSKRKSVAVIGDGALTAGMAFEALNHAADVKANMLVVLN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A K 
Sbjct: 187 DN-DMSISKN--------VGGLSNYLAKILSSRTYANVREGSKKVLSKLPGAW-EIARKT 236

Query: 306 DEYARGM-ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
           +E+A+GM +SG   T+FEELG  YIGP+DGH++  L+A L  +++ +  G   +HVVT+K
Sbjct: 237 EEHAKGMLVSG---TMFEELGWNYIGPIDGHDLPTLLATLRNMRDLE--GLQFLHVVTKK 291

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           G+G+  AE     YH + K +P        +     Y++ F + L   A  D+ ++AI  
Sbjct: 292 GKGFAPAEVDPIVYHAITKLEPINAPAKVKAPSGPKYSSVFGQWLCEMAAHDERLMAITP 351

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+ L  F    P R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++
Sbjct: 352 AMKEGSDLVAFSEHHPDRYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQLI 411

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M++M PSDE EL HM+ T 
Sbjct: 412 HDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLIMTPSDENELHHMLTTG 471

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
                 P+  RYPRG+G     P   +  PL +GKG +  +G+ VALL +G  +   L  
Sbjct: 472 YQFTG-PAAVRYPRGSGPNA--PIDRELSPLPIGKGVVRRQGKGVALLVFGVQLAEALRV 528

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
              L++     TV D RF KPLD AL+  LA SH++L+T+EE S+ GG GS V +FLA  
Sbjct: 529 GGTLDA-----TVVDMRFVKPLDEALVSELAASHDLLVTIEENSVMGGAGSAVSEFLASQ 583

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           G L   +    L LPD Y++H  P   LA+ GL  + I   +
Sbjct: 584 GTLKPMLH---LGLPDYYVEHARPDQMLAECGLDEAGIEKAI 622


>gi|417842707|ref|ZP_12488788.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21127]
 gi|341951266|gb|EGT77843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21127]
          Length = 625

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 415/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG + +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K +++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKHNSKP-TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P      L +GK R++ EG+++A+L +GT + S L A+  L +    
Sbjct: 475 RYPRGNAIGVELTPLEM---LPIGKSRLIREGQKIAILNFGTLLPSALEAAEKLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 528 -TVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + L   GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALKDLGLDSKGIEDKILNFIAK 621


>gi|325294213|ref|YP_004280727.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064661|gb|ADY72668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 619

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 309/647 (47%), Positives = 432/647 (66%), Gaps = 35/647 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+ +N P  +K LS  EL+QLA ++R  +I  V+KTGGHL SSLGV+ELT+AL  VF+ 
Sbjct: 2   VLERVNSPDDVKKLSTEELRQLAQDVRKFIIDVVTKTGGHLASSLGVVELTLALLKVFSP 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD I+WDVGHQ+YP+KILTGR++K +T+RQ  G+SGF    ES YD FG GHSSTSISA
Sbjct: 62  PKDEIIWDVGHQSYPYKILTGRKEKFYTLRQYGGISGFPSIKESPYDVFGVGHSSTSISA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+ VG+ LKG + +V+AVIGDGA+TAG+AYE +NNAG L  D+IVILNDN ++S+   
Sbjct: 122 ALGIRVGKKLKGEEGHVIAVIGDGALTAGEAYEGLNNAGQLGEDLIVILNDN-EMSISKN 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI-GGPMHELAAKVDEY-ARGMI 313
                   +GA+S+ L+++ +   LR+ +   + VTK+I G  +++   +V++   +G+ 
Sbjct: 181 --------IGAISNYLTKVTTGEFLRKAKHRLEEVTKKIFGEKVYKGLKRVEDLIVKGLF 232

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                 LFEELG  Y+GP+DGH++D L+  LE V  +K +GP L+HV+T+KG+GY  AE+
Sbjct: 233 --PPGMLFEELGFRYVGPIDGHDLDTLIVTLENV--SKMSGPTLVHVITKKGKGYEPAEE 288

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
             +++HG++       K+  S ++  +YT  F++ LI   +  KD+VAI AAM  GTGL+
Sbjct: 289 KPERFHGISP------KKTNSDSKQPTYTEVFSKTLIEIGKKYKDIVAITAAMPSGTGLD 342

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F   FP R +DVGIAEQHAVTFAAG+A +GLKP  AIYS+F+QRA+DQ+VHDV LQ+LP
Sbjct: 343 KFKEVFPERYYDVGIAEQHAVTFAAGMAKKGLKPVVAIYSTFLQRAFDQIVHDVALQELP 402

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVG DG TH G+FD++++  +PNMVV  P DE EL H++ TA    ++P  
Sbjct: 403 VVFAIDRAGLVGEDGATHHGAFDLSYLRIIPNMVVAVPKDEEELRHLLYTAVR-SNKPFA 461

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GV L      IP  +G   +L +G+ +A+L  G  V   L A+  LE  G+
Sbjct: 462 VRYPRGRGYGVLLREPLYEIP--IGTWEVLRKGKDMAILANGWTVYQALDAAKELEKLGI 519

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLA---QDGLLDGT 669
            +TV +AR+ KPLD  L+R LAK +E+++TVEE ++ GGFGS V +FLA   Q  L++  
Sbjct: 520 SVTVVNARYVKPLDEVLLRELAKEYELILTVEENTVKGGFGSTVDEFLAPWYQGKLVN-- 577

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
                + LPD +I+HG        AG+    I   V   L +   +L
Sbjct: 578 -----IGLPDEFIEHGDQNLLRRLAGIDKEGIKKKVMEFLKKRASSL 619


>gi|399543830|ref|YP_006557138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. BSs20148]
 gi|399159162|gb|AFP29725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. BSs20148]
          Length = 654

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 309/649 (47%), Positives = 424/649 (65%), Gaps = 38/649 (5%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
           QRP TP+LD I  P  ++ L   +L QLA ELR+ ++++V  TGGH G+ LGV+ELTVAL
Sbjct: 13  QRPNTPMLDRIGSPADIRQLPADQLTQLARELRSFLLWSVGTTGGHFGAGLGVLELTVAL 72

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HYVFN P+DR++WDVGHQ YPHKILTGRR++M ++R+ +GL+GF KR+ES YD FG GHS
Sbjct: 73  HYVFNTPEDRLVWDVGHQAYPHKILTGRREQMGSIRRKNGLAGFPKRTESPYDTFGVGHS 132

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA LGMA+  + +G     +AVIGDGAMTAG A+EA+N+AG+L +DM+VILNDN  
Sbjct: 133 STSISAALGMAIASNQQGLTRKCIAVIGDGAMTAGMAFEALNHAGHLKADMLVILNDN-D 191

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+           VG LS+  ++L S+R   ++R+ +K V  +I   + ELA K +E+ 
Sbjct: 192 MSISRN--------VGGLSNYFAKLLSSRTYHQMRDSSKKVL-EIAPGLRELAKKTEEHF 242

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GMI  +  TLFEELG  YIGP+DGH++  LV  LE ++  + +GP  +H+VT KG+G+ 
Sbjct: 243 KGMI--APGTLFEELGFNYIGPIDGHDLPLLVETLENIR--ELSGPQFLHIVTTKGKGFA 298

Query: 370 YAEKAADKYHGVAKFDPATGKQ--------FKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
            AE     YH + K +P              K+      Y   F + L   A  D+ V+ 
Sbjct: 299 PAEADPIGYHAINKIEPLAATTESSGNPTPVKTGPAAPKYANVFGQWLCDAAAADERVMG 358

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G KP  AIYS+F+QR YD
Sbjct: 359 ITPAMCEGSDLLAFAERFPERYFDVAIAEQHAVTLAAGMACDGAKPVVAIYSTFLQRGYD 418

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNMV+M PSDE E   ++
Sbjct: 419 QLIHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCIPNMVLMTPSDENETRQLL 478

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE----RVALLGYGTA 597
            T   + + P+  RYPRG+G G E+ P    +P+  GKGR++ E +    R+A+L +GT 
Sbjct: 479 HT-GLVHEGPAAVRYPRGSGSGAEIDPLLHTLPM--GKGRVVRERKSASGRIAILNFGT- 534

Query: 598 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHV 656
               L   AL  +  L  TVAD RF KPLD  LIR LA+ H++L+T+EE +I GG GS V
Sbjct: 535 ----LLPRALQAAQALDATVADMRFVKPLDEDLIRQLAEQHDLLVTLEENAIAGGAGSAV 590

Query: 657 VQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++L Q+ +   T+    L LPD+++DHGS    L + GL  + I  ++
Sbjct: 591 CEWLNQEEI---TMPVLQLGLPDKFVDHGSRDQLLEECGLDAATIERSI 636


>gi|328952417|ref|YP_004369751.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452741|gb|AEB08570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfobacca acetoxidans
           DSM 11109]
          Length = 660

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 318/640 (49%), Positives = 407/640 (63%), Gaps = 22/640 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLD IN P+ +K L++ +L QLA E+R  +I  VS TGGHL  +LGV+ELT+ALHYVF+ 
Sbjct: 22  LLDAINSPVDLKRLAVEQLPQLAQEIRQQIISTVSTTGGHLAPNLGVVELTIALHYVFDT 81

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HK+LTGR+D  HT+RQ+ GLSGF KR ES YD F TGHSSTSISA
Sbjct: 82  PRDKIIWDVGHQAYTHKLLTGRKDVFHTLRQSGGLSGFPKRGESPYDAFDTGHSSTSISA 141

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAVG+ LK  +  V+AVIGDG+MTAG A+E +NNAG L  D+IV+LNDN ++S+   
Sbjct: 142 ALGMAVGKCLKKERRRVIAVIGDGSMTAGLAFEGLNNAGDLSKDLIVVLNDN-EMSIS-- 198

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHEL---AAKVDEYARGM 312
                 P VGALSS LSR  + R +   R   +   K + G   EL   A K +E  +  
Sbjct: 199 ------PNVGALSSFLSRKLTKRAVVYARRQFENFLKMVPGIGDELMLWAKKSEESFKSF 252

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +   LFE L   Y+GPV GH  D L+     VKN    GPVL+HV+T KG+GY  AE
Sbjct: 253 L--TPGMLFEALKFNYLGPVQGHRFDHLIETFGNVKN--LNGPVLVHVLTTKGKGYEPAE 308

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                +HG+  FD  TG+  K+ +   +YT  F   LI  A  D  +VA+ AAM  GTGL
Sbjct: 309 CNPTCFHGLGCFDLETGEPKKTVSDIPTYTEVFGNTLIKLAREDHRIVAVSAAMPDGTGL 368

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F   +P R FDVGI EQHAVTFAAG+A EG +P  AIYS+F+QRAYDQV+HDV +Q L
Sbjct: 369 VDFRLHYPDRFFDVGICEQHAVTFAAGIATEGFRPVVAIYSTFLQRAYDQVLHDVCIQNL 428

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DR G+VG DG TH G FD++++  LPNM++MAP DE EL HM+ TA +    P 
Sbjct: 429 PVIFALDRGGIVGEDGETHQGLFDLSYLRHLPNMILMAPKDEDELRHMLYTAVS-HVGPI 487

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G+G  L P  K IPL  G+  +L EG+ + +L  G +V   L A+  LE  G
Sbjct: 488 ALRYPRGGGVGTPLSPVLKKIPL--GQAEVLTEGDDLLILAVGASVYPALEAARGLEEQG 545

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVK 671
            + TV +ARF KPLD A I SLA     ++TVEE  + GGFGS V++ L+  GL    VK
Sbjct: 546 FKATVVNARFIKPLDQAQILSLAARCGRVLTVEENVAAGGFGSAVLELLSDHGLHGIPVK 605

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
              L + D +++HGS      + GL P  I     N+LG 
Sbjct: 606 R--LGVGDLFVEHGSQKILRRKYGLDPQGILEGALNLLGH 643


>gi|95928788|ref|ZP_01311534.1| deoxyxylulose-5-phosphate synthase [Desulfuromonas acetoxidans DSM
           684]
 gi|95135133|gb|EAT16786.1| deoxyxylulose-5-phosphate synthase [Desulfuromonas acetoxidans DSM
           684]
          Length = 625

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 308/626 (49%), Positives = 409/626 (65%), Gaps = 25/626 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ +  P  +K+ S+ EL  LA ELR ++I  VS TGGHL SSLG++ELT+ALHYV N+
Sbjct: 4   LLENLETPADLKDFSLNELTVLAQELRDEIINTVSHTGGHLASSLGIVELTIALHYVMNS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HK+LTGR +  +T+RQ DG+SGF KR ES +DCF  GHSSTSISA
Sbjct: 64  PRDKIIWDVGHQAYAHKLLTGRLNLFNTLRQLDGISGFPKRKESPHDCFDVGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAVGRD K   N VVAVIGDG++TAG A+EA+N+AG+LD +MI+ILNDN ++S+   
Sbjct: 124 ALGMAVGRDCKELNNKVVAVIGDGSLTAGLAFEALNHAGHLDRNMIIILNDN-EMSIS-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPL----RELREVAKGVTKQIGGPMHELAAKVDEYARG 311
                 P VGALSS LSR  ++R      RE     K V +  G  + +LA + ++  + 
Sbjct: 181 ------PNVGALSSFLSRKMTSRLFVRFKRETEIFLKSVPR-FGKDLVQLAKRTEDSFKA 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +  +   LFE  G+ Y+GP+DGH++D+L+  L+ V  ++  GP LIHVVT KG+GY  A
Sbjct: 234 FV--TPGMLFEAFGIEYVGPIDGHSMDELIETLQNV--SRLDGPSLIHVVTRKGKGYQPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E     +HGV  FD  +GK   ++    SYT+ F E L   AE D  +VAI AAM  GTG
Sbjct: 290 EDNPALFHGVGPFDKTSGKVKTTTGAPPSYTSVFGEYLCQLAEKDSRLVAITAAMCTGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F  RFP R FDVGIAEQHAVT AAG+ACE L+P  AIYS+F+QRAYD V+HDV LQ 
Sbjct: 350 LVPFAERFPKRFFDVGIAEQHAVTLAAGMACEELRPVVAIYSTFLQRAYDNVLHDVCLQN 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DR GLVGADGPTH G FD++++  +PN+ V  P DE EL   + TA    D P
Sbjct: 410 LPVTFALDRGGLVGADGPTHHGVFDLSYLRHIPNVTVAVPRDELELKRAMLTATT-SDGP 468

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             +RYPRGNG+G++     K  PL +G+G  L EG+   L+  GT  ++ +  +  L   
Sbjct: 469 FVYRYPRGNGLGLQQTDDFK--PLTIGQGEKLREGQAATLVSIGTFAETAMDVAVKLSEK 526

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+ + V DARF KPLD  L+ + A+    +IT+EE  + GGFGS V++ + ++ L    +
Sbjct: 527 GIEIAVVDARFLKPLDQELLIAEARRTGNIITLEENVLAGGFGSAVMELMEKNRLYPRVM 586

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGL 696
           +   L LPD +I  GS  + L   GL
Sbjct: 587 R---LGLPDEFIQQGSHDELLKLHGL 609


>gi|422667497|ref|ZP_16727360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330978747|gb|EGH77972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 630

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/641 (47%), Positives = 417/641 (65%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E   +RP TPLLD  + P  ++ L   EL+ LADELR +++++V +TGGH G+ LGVIEL
Sbjct: 7   EIPRERPVTPLLDRADTPHGLRRLGEAELETLADELRLELLYSVGQTGGHFGAGLGVIEL 66

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYVF+ P DR++ DVGHQ YPHKILTGRR +M T+RQ DG++ F +RSESEYD FG
Sbjct: 67  TIALHYVFDTPDDRLVGDVGHQAYPHKILTGRRARMSTLRQKDGVAAFPRRSESEYDTFG 126

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   L+G +   +AVIGDGA+TAG A+EA+N+A  + +DM+VILN
Sbjct: 127 VGHSSTSISAALGMAIASRLQGSERKSIAVIGDGALTAGMAFEALNHAPEVAADMLVILN 186

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG LS+ L+++ S+R    +RE +K V  ++ G   E+A + 
Sbjct: 187 DN-DMSISRN--------VGGLSNYLAKILSSRTYSSMREGSKKVLSRLPGAW-EIARRT 236

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +EYA+GM+     TLFEELG  YIGP+DGH++  L+A L  +++ K  GP  +HVVT+KG
Sbjct: 237 EEYAKGML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLK--GPQFLHVVTKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +P      +       Y+  F + +   A+ D  +V I  A
Sbjct: 293 KGFEPAEVDPIGYHAITKLEPLNAPAAQKKISAPKYSGVFGQWICDMADADARLVGITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+ L  F  RFP R FDV IAEQHAVT AAG+ACEG KP  AIYS+F+QR YDQ++H
Sbjct: 353 MKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGMACEGSKPVVAIYSTFLQRGYDQLIH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE EL  +++T  
Sbjct: 413 DVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKLLST-G 471

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            +   P+  RYPRG G    +    +  P+E+GKG +  +G+ VA+L +G  +     A 
Sbjct: 472 YLHTGPAAVRYPRGTGPNAVIEANLE--PVEIGKGVVRRQGQGVAILAFGVQL-----AE 524

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL+ +  L  TV D RF KPLD AL+   A +HE+L+T+EE ++ GG G+ V +FLA+  
Sbjct: 525 ALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARAN 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +L   +    L LPD Y++H  PA  L + GL    I A +
Sbjct: 585 ILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAI 622


>gi|404496791|ref|YP_006720897.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|418065258|ref|ZP_12702632.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
 gi|118595481|sp|Q39UB1.1|DXS1_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|78194396|gb|ABB32163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|373562436|gb|EHP88647.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
          Length = 625

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 320/636 (50%), Positives = 414/636 (65%), Gaps = 22/636 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +LDTI  P  +K ++ REL QLA ELR  +I   ++ GGHL  SLGV+ELT+ALH VF
Sbjct: 2   TAILDTIESPCDLKGVTQRELAQLAAELREKIITVCARNGGHLAPSLGVVELTLALHRVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           ++P D+I+WDVGHQ Y HK+LTGRRD+  T+R   G+SGF KR ES +D F TGH+STSI
Sbjct: 62  DSPADKIIWDVGHQAYAHKLLTGRRDRFATLRTLGGISGFPKRCESSHDAFDTGHTSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LG AV RDL+G +N VVAVIGDG+MT G AYE +NNAG+L+ D++V+LNDN ++S+ 
Sbjct: 122 SAALGFAVARDLRGERNKVVAVIGDGSMTGGLAYEGLNNAGHLNKDLVVVLNDN-EMSIA 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVT---KQIGGPMHELAAKVDEYAR 310
                     VGALS+ L+R  ++  +  +++  +G      +IG  + ++A + +E  +
Sbjct: 181 EN--------VGALSNFLNRTVTSEFVHTMKKDLEGFLGGLDRIGHGVLKVAKRAEESLK 232

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           G+ +     LFE  G  YIGP+DGH+   L+   E+VK  +    VLIHV+T+KGRGYP 
Sbjct: 233 GLFTPG--MLFEAFGFEYIGPIDGHDTARLMETFEKVK--RFDDAVLIHVLTKKGRGYPP 288

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE+    +HGV  F+  TGK  K      SYT  F EA+   A  D+ V+A+ AAM  GT
Sbjct: 289 AEEKPALFHGVGPFELETGKVIKGKGGAASYTGVFGEAIRKIAAEDERVIALTAAMPDGT 348

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F   +PTR FDVGIAEQH VTFAAGLA EG +P  A+YSSF+QRAYDQV HDV LQ
Sbjct: 349 GLTPFAADYPTRFFDVGIAEQHGVTFAAGLAAEGYRPVFAVYSSFLQRAYDQVFHDVCLQ 408

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAG+VG+DGPTH G FD+ ++  LPNMVVMAP DE EL H++ TA    D 
Sbjct: 409 NLPVTFAIDRAGVVGSDGPTHHGLFDLAYLRHLPNMVVMAPKDENELQHLLLTAIE-HDG 467

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRGNG GV L      +P  +GKG IL EG   ALL  G+ V     A+  L +
Sbjct: 468 PAAVRYPRGNGYGVSLDQTCSVLP--IGKGEILREGLDGALLAIGSTVYPAREAAEALAA 525

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
            G+ L V +ARF KPLD  LI SLA++   LI VEE  I GGFG+ V++ L ++G+    
Sbjct: 526 EGIDLAVVNARFVKPLDRDLILSLARTTGRLIIVEENVIQGGFGTAVLELLEEEGI--NG 583

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           VK   L  PDRY++ G   +  AQ GL    I A V
Sbjct: 584 VKVLRLGYPDRYVEQGEQHELRAQYGLDAPGITARV 619


>gi|254446977|ref|ZP_05060444.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           HTCC5015]
 gi|198263116|gb|EDY87394.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           HTCC5015]
          Length = 633

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/644 (47%), Positives = 412/644 (63%), Gaps = 26/644 (4%)

Query: 70  QRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVAL 129
            R   PLL  I+ P  ++ L+  +L  L+DELR  +I +VS++GGH G++LG +ELT+AL
Sbjct: 5   NRSKYPLLSQIDSPSDLRRLNRDQLAPLSDELRNYLIESVSQSGGHFGANLGTVELTIAL 64

Query: 130 HYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHS 189
           HY FN P DR++WDVGHQ+YPHKILTGRRD++ T+R+ DGL+ F KR ESEYD FG GHS
Sbjct: 65  HYAFNTPYDRLVWDVGHQSYPHKILTGRRDQLGTIRKKDGLTPFPKRKESEYDTFGVGHS 124

Query: 190 STSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
           STSISA LGMA+   L G     VA+IGDGAMTAG A+EA+NNAG L+++M+VILNDN +
Sbjct: 125 STSISAALGMAMAARLNGEDRKAVAIIGDGAMTAGMAFEALNNAGDLNANMLVILNDN-E 183

Query: 250 VSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYA 309
           +S+         P VGAL+   ++L S R    +RE  K     +   + ELA + +E+ 
Sbjct: 184 MSIS--------PNVGALNKYFTKLLSGRFYSTVRESGKKALSPM-PQLKELARRTEEHV 234

Query: 310 RGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           +GM+  +  TLFE  G  Y GPVDGH+V+ +  +L+ +K+ K  GP L+HVVT+KG+GY 
Sbjct: 235 KGML--TPGTLFEAFGFQYFGPVDGHDVETMSDVLDNIKDIK--GPCLLHVVTKKGKGYD 290

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE    KYHGV +FDPA G Q   +    +YT  F + L   A  +  +  I  AM  G
Sbjct: 291 KAEADQVKYHGVGQFDPAEGIQPSGAPSAPTYTQVFGQWLCDMAAAEPKLAGITPAMREG 350

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           +GL  F ++FP R FDVGIAEQHAVT AAGLAC+G+KP  AIYS+F+QRAYDQ +HDVD+
Sbjct: 351 SGLVDFEKQFPERYFDVGIAEQHAVTLAAGLACDGIKPVVAIYSTFLQRAYDQAIHDVDI 410

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q L V FA+DRAGLVG DGPTH GSFD +F+ CLPN +VMAP+DE E   M++T      
Sbjct: 411 QNLDVLFAIDRAGLVGPDGPTHAGSFDYSFLRCLPNTLVMAPADENECRKMLSTGLQ-HK 469

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G GV +    + +P  +G+  +  EG  +A+LG+G  +  C        
Sbjct: 470 GPAAVRYPRGKGPGVAVENTLETLP--IGQSELRREGSGIAILGFGAVLADCETV----- 522

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +  L  ++ + RF  PLD   +  +A++H+++ITVEE  I GG GS V +F    G+   
Sbjct: 523 AQNLGASLVNMRFVSPLDEQRLIEMAETHDLIITVEENVIAGGAGSAVNEFYNSRGVRAP 582

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
            +    + LP+RYI+HG   + L  AGL  + I   +   L Q 
Sbjct: 583 VLN---IGLPNRYIEHGQREEMLTDAGLDAAGIETQIREWLKQN 623


>gi|171464022|ref|YP_001798135.1| deoxyxylulose-5-phosphate synthase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193560|gb|ACB44521.1| deoxyxylulose-5-phosphate synthase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 633

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 314/638 (49%), Positives = 424/638 (66%), Gaps = 33/638 (5%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L ++N P  +K LS  EL  LADELR  V+ +VSKTGGHL S+LG +EL++ALHYVF+ P
Sbjct: 3   LHSVNSPDDLKKLSREELPALADELREFVLDSVSKTGGHLSSNLGTVELSIALHYVFDTP 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +DRI+WDVGHQ+YPHKILTGRR++M+T+RQ  GLSGF  RSESE+D FGTGHSSTSISA 
Sbjct: 63  QDRIVWDVGHQSYPHKILTGRRERMNTLRQYKGLSGFPHRSESEFDAFGTGHSSTSISAA 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTA 255
           +GMA     KG ++  VAVIGD AMT G A+EAMNNAG Y D  ++VILNDN  +S+   
Sbjct: 123 MGMARAFQTKGERHVAVAVIGDSAMTGGMAFEAMNNAGVYDDLPLVVILNDN-DMSIS-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGAL+  L+RL S       ++    V   I  P+ E A +++++A+GM+  
Sbjct: 180 ------PAVGALNRHLARLLSGNIYSATKKSIDSVL-SIAPPLREFAKRLEDHAKGMV-- 230

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN--TKTTGPVLIHVVTEKGRGYPYAEK 373
           S ST+F+E G  Y GP+DGH++D L+ +L+ V+    +  GP  +HVVT+KG+GY  AE 
Sbjct: 231 SPSTIFQEFGFNYFGPIDGHDLDALIPMLQNVRRLALEGRGPQFLHVVTKKGQGYELAEA 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG +KF+P  G + KS A  +++T  F E L   A  D  +V I  AM  G+GL 
Sbjct: 291 DPVLYHGPSKFNPEEGVK-KSVASKKTFTRVFGEWLCDMAHADPLLVGITPAMREGSGLV 349

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LP
Sbjct: 350 EFEKNFPKRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVALQDLP 409

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D++F+ C+PNM+V+ P+DEAE   ++ TA      PS 
Sbjct: 410 VLFALDRAGLVGADGATHAGAYDISFLRCIPNMLVLTPADEAECRDLLTTAFH-QPHPSA 468

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALL 608
            RYPRG G+G    P  +   L +GKG +  +     G+RVA+L +GT     L  SAL 
Sbjct: 469 VRYPRGAGVGT--IPSKELRTLPLGKGEVRRKSSAPAGQRVAILSFGT-----LLYSALE 521

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
            + G+  +VA+ RF KPLD  LI+SLA  H+  +T+E+G+I GG  S  ++ L+  G+  
Sbjct: 522 VAEGIDASVANMRFVKPLDVDLIQSLAADHDYFVTIEDGAIAGGASSACLEALSNLGINK 581

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             ++   L LPD +I+HG  +  + + GL    IA ++
Sbjct: 582 PLLR---LGLPDEFIEHGDYSLLMTKCGLDVEGIANSI 616


>gi|387813232|ref|YP_005428714.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|381338244|emb|CCG94291.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Marinobacter hydrocarbonoclasticus ATCC
           49840]
          Length = 643

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 312/651 (47%), Positives = 419/651 (64%), Gaps = 31/651 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  SQRP TPLLD I+ P  ++ L   +L +LA ELRA ++++V +TGGH G+ LGV+EL
Sbjct: 9   EIPSQRPNTPLLDRIDVPSQLRELPAEDLPRLARELRAFLLWSVGQTGGHFGAGLGVLEL 68

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVFN P+DR++WDVGHQ YPHKILTGR+++M ++R+  GL+GF KR+ESEYD FG
Sbjct: 69  TVALHYVFNTPEDRLVWDVGHQAYPHKILTGRKEQMGSIRRKGGLAGFPKRAESEYDTFG 128

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   ++      +AVIGDGAMTAG A+EA+N+AG+L +DM+V+LN
Sbjct: 129 VGHSSTSISAALGMAIAARMQNTGRKSIAVIGDGAMTAGMAFEALNHAGHLHADMLVVLN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAK 304
           DN  +S+           VG LS+  ++L S+R   ++R+ +K V K  G P +  LA K
Sbjct: 189 DN-DMSISRN--------VGGLSNYFAKLLSSRTYNQVRDSSKKVLK--GTPHLMALAKK 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +E+ +GMI  +  TLFEELG  YIGP+DGH++  LV  LE ++  +  GP  +HVVT K
Sbjct: 238 TEEHFKGMI--APGTLFEELGFNYIGPIDGHDLPLLVETLENIRELE--GPQFLHVVTTK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQ---FKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           G+G+  AE     YH + K +P    +    K    +  Y   F + L   AE D  V  
Sbjct: 294 GKGFAPAEADPIGYHAINKIEPVPASKPEPVKPKPASPKYANVFGQWLCDAAEQDSRVAG 353

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F  RFP R FDV IAEQHAVT AAGLAC+G KP  AIYS+F+QRAYD
Sbjct: 354 ITPAMCEGSDLLAFSERFPDRYFDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYD 413

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q+VHDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNM+VM PSDE E   ++
Sbjct: 414 QLVHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCIPNMLVMTPSDENETRQLL 473

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            T       P+  RYPRG G G E+    +  PL +GKGR + +G  +A+L +GT     
Sbjct: 474 HTGLEYSG-PAAVRYPRGTGPGAEIQ--QQLTPLPIGKGRRVRDGSGIAILNFGT----- 525

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           L A  L  +  L  TVAD RF KPLD AL+  LA++H++L+T+EE  I GG GS V +FL
Sbjct: 526 LLAPGLEAAEALGATVADMRFVKPLDEALVLELAETHDLLVTLEENVIAGGAGSAVTEFL 585

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
               +   ++    L LPD +++HG   + L   GL    I  ++   + Q
Sbjct: 586 NARQV---SMPVLQLGLPDAFVEHGQHKELLRDCGLDTEGILRSIATRMEQ 633


>gi|329118658|ref|ZP_08247362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327465393|gb|EGF11674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 630

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 316/645 (48%), Positives = 410/645 (63%), Gaps = 45/645 (6%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           PTPLLD +N P  ++ L   +L QL  ELRA ++ +V KTGGH  S+LG +EL VALHYV
Sbjct: 3   PTPLLDAVNLPQDLRLLDKSQLPQLCAELRAFLLESVGKTGGHFASNLGAVELAVALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           ++ P+D ++WDVGHQ+YPHKILTGRR +MHT+RQ  GL+GF KRSESEYD FG GHSSTS
Sbjct: 63  YDTPRDHLVWDVGHQSYPHKILTGRRGRMHTLRQFGGLAGFPKRSESEYDDFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVS 251
           I A LGMA    L GR    VAVIGDGAMTAGQA+EA+N AG + D+D++VILNDN ++S
Sbjct: 123 IGAALGMAEADRLMGRDTRSVAVIGDGAMTAGQAFEALNCAGDMADTDLLVILNDN-EMS 181

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIG------GPMHELAAKV 305
           +         P VGAL   L+R      +R++R V   +  Q          + E+A K 
Sbjct: 182 IS--------PNVGALPKYLAR----NVMRDMRGVLHNIKSQSAFVLDKLPAVKEIAQKA 229

Query: 306 DEYARGMISGS-----GSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHV 360
           +E  +   S S       +LFE  G  Y GP DGHNV  L   L E++  K  GP L+HV
Sbjct: 230 EETIKAYASESELVRQSLSLFENFGFAYTGPADGHNVVQLADTLAELRRKK--GPKLLHV 287

Query: 361 VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
           +T+KG+GY  AE    KYH + K            A   +YT  F   L  +AE D  + 
Sbjct: 288 ITKKGQGYKLAENDPVKYHAIGKTPAPADPAAPPPAPRPTYTEIFGRWLCDQAEADTRLA 347

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
           AI  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAGLACEG+KP  AIYS+F+QR Y
Sbjct: 348 AITPAMREGSGLVEFGQRFPERYFDVGIAEQHAVTFAAGLACEGVKPVVAIYSTFLQRGY 407

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQ+VHDV LQ LPV FA+DRAG+VGADGPTH G++D++F+ C+PNM + APSDE E   +
Sbjct: 408 DQLVHDVALQNLPVLFAIDRAGIVGADGPTHAGAYDLSFLRCVPNMTIAAPSDENECRLL 467

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQS 600
           ++T  A+ D P+  RYPRG G G ++  G   +P  VGKG +  +G+R+A+L +G+ VQ 
Sbjct: 468 LSTCYAL-DTPAAVRYPRGTGSGAQVSDGLDTLP--VGKGILRRQGKRIAILAFGSMVQP 524

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQF 659
            L A+  L++     TVAD RF KPLD AL+  LA +H+ L+  EE ++ GG GS V++ 
Sbjct: 525 ALEAAETLDA-----TVADMRFVKPLDEALVLQLADTHDCLVCAEENAVCGGAGSAVLEM 579

Query: 660 LAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLTPSHI 701
           LA  G      + +P++L   PD   +HG P   L Q GL+   I
Sbjct: 580 LAAKG------RLKPVLLIGIPDTVTEHGDPKLLLDQLGLSADKI 618


>gi|145636151|ref|ZP_01791821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittHH]
 gi|148825982|ref|YP_001290735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittEE]
 gi|229846703|ref|ZP_04466810.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           7P49H1]
 gi|166198620|sp|A5UC51.1|DXS_HAEIE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145270673|gb|EDK10606.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittHH]
 gi|148716142|gb|ABQ98352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittEE]
 gi|229810192|gb|EEP45911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           7P49H1]
          Length = 625

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 417/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA+L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVAMLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|359300541|ref|ZP_09186380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           [parainfluenzae] CCUG 13788]
          Length = 619

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 307/635 (48%), Positives = 417/635 (65%), Gaps = 32/635 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I+ P  ++ L   +L+ LADELRA ++  VS++ GHL S LGV+ELT+ALHYV+ 
Sbjct: 6   PLLSQIDSPEALRLLDKDQLQTLADELRAYLLECVSQSSGHLASGLGVVELTIALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD++ T+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV    +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAQKENAGRQTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+++ S      +R+ +K V +++  P+     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLAQIFSGSLYTTVRDGSKKVLEKVPSPIKNFMKKTEEHMKGVIS 236

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+++LV  L+ ++  K  GP  +HV T+KG+GY  AE  
Sbjct: 237 PV-STLFEELGFNYIGPVDGHNIEELVKTLKNMRELK--GPQFLHVRTKKGKGYQPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDPA+G Q   +    +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 294 PIGYHGVPKFDPASG-QLPKAKSIPTYSDIFGQWLCETAEQDTKLIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFAAGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPEQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMTPSDENEMRQMLYTAYQM-NTPTAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LE+GKG+++ +GE+VA+L +GT +     A  + E+    
Sbjct: 472 RYPRGNAKGVALEPMES---LEIGKGKLIRQGEKVAILNFGTFLTE---AQKVAEAG--N 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KPLD ALI+ LA SH++L+T+EE +I GG GS V ++L + G      K +
Sbjct: 524 YTLADMRFVKPLDEALIQELANSHDLLVTLEENAIQGGAGSAVNEYLQKIG------KIK 577

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATV 705
           PLV+   PD +I   +  +     GL  + I   +
Sbjct: 578 PLVMLGIPDEFIPQSTQQEAYEALGLDSAGIKQKI 612


>gi|386288982|ref|ZP_10066121.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           BDW918]
 gi|385277986|gb|EIF41959.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           BDW918]
          Length = 641

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/641 (47%), Positives = 421/641 (65%), Gaps = 33/641 (5%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ L   EL  LA +LR  +++ V +TGGH G+ LGV+ELTVALH
Sbjct: 9   RPATPLLDRIDSPADLRRLDEAELATLALQLREFLLYTVGQTGGHFGAGLGVVELTVALH 68

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           Y++N P DR++WDVGHQ YPHKILTGRR++M+ MR+  GL+GF KR ES YD FG GHSS
Sbjct: 69  YIYNTPDDRLVWDVGHQCYPHKILTGRRERMNGMRKAKGLAGFPKREESPYDTFGVGHSS 128

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMA+    +    + VAVIGDGAMTAG A+EA+ +A +  ++M+VILNDN Q+
Sbjct: 129 TSISAALGMAIAARQQNIDRHTVAVIGDGAMTAGMAFEAITHATHTGANMLVILNDN-QM 187

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+  +T        G L++  SR+ +++   ++R   K V K+      +LAA+++EY +
Sbjct: 188 SISKST--------GGLNTYFSRMWASKTYNQIRSGGKTVLKKFPRSATDLAARLEEYMK 239

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+  S +TLFEELG  YIGP+DGH++D LV  L  ++  +  GP ++H+ T+KG+G+  
Sbjct: 240 GMV--SPATLFEELGFNYIGPIDGHDLDVLVPTLRNLR--ELPGPQMLHIRTQKGKGFGP 295

Query: 371 AEKAADKYHGVAKFD--PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
           AE+    +H ++K +  P+ G+          Y   F   L  +AE   ++VAI  AM  
Sbjct: 296 AEEDPVGFHAISKIEPKPSNGQAPIVKPTLAKYQDIFGRWLCDQAEQSPELVAITPAMCE 355

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+G+  F  RF  R +DV IAEQHA+T AAG+AC+GLKP  AIYS+F+QRAYDQ++HD+ 
Sbjct: 356 GSGMLDFSERFADRFYDVAIAEQHALTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIA 415

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ L V F +DRAGLVG DGPTH G+FD++F+ C+PNM+VMAP+DE E   M+ TA    
Sbjct: 416 LQNLDVTFGIDRAGLVGEDGPTHAGAFDLSFLRCIPNMIVMAPADENETRQMLHTAYHYP 475

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P+  RYPRG G GV +    +   +E+GKGRI  +G+++A+L +GT     L ASAL 
Sbjct: 476 G-PAAVRYPRGTGPGVSIEQDMQ--LMEIGKGRIQRQGQKIAILSFGT-----LLASALN 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
            ++ L  TVAD RF KPLD  LI +LA  H++L+T+EE  I GG GS V ++L Q     
Sbjct: 528 AADELDATVADMRFVKPLDTDLIDALADDHDLLVTLEENVIAGGAGSAVSEYLNQQN--- 584

Query: 668 GTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              +W P++   LPD +IDHG  A  L+  GL    I A++
Sbjct: 585 ---RWMPVMQLGLPDAFIDHGKHAQLLSDIGLDTPGILASI 622


>gi|145632791|ref|ZP_01788524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145634983|ref|ZP_01790690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
 gi|144986447|gb|EDJ93013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145267849|gb|EDK07846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
          Length = 625

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 417/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA+L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVAMLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATRQEALADLGLDTKGIEEKILNFIAK 621


>gi|334341585|ref|YP_004546565.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum ruminis DSM
           2154]
 gi|334092939|gb|AEG61279.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum ruminis DSM
           2154]
          Length = 636

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 316/640 (49%), Positives = 415/640 (64%), Gaps = 27/640 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L TI  P  ++NL I +L+ LA E+R  ++  V+ TGGHL  +LGV+ELT+ALH VF
Sbjct: 2   TSILKTIYSPQDLQNLKIPQLQILAQEIREKIVETVAVTGGHLAPNLGVVELTLALHRVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N   DRI+WDVGHQ+Y HK+LTGR+ +  T+RQ  G+SGF +  ES +D FGTGHSSTSI
Sbjct: 62  NTSVDRIIWDVGHQSYVHKLLTGRQSQFGTLRQYGGISGFPRPDESVHDAFGTGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+ RDLKG + +VVAVIGDG+MT G A+EA+N+AG+L  ++IV+LNDN+    P
Sbjct: 122 SAALGMALARDLKGEEYSVVAVIGDGSMTGGMAFEALNHAGHLQKNLIVVLNDNEMSIAP 181

Query: 254 TATLDGPIPPVGALSSALSRLQSN-RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                     VGALS  LSRL+++ +  R   E+A  + K   G   +L   VD    G+
Sbjct: 182 N---------VGALSGYLSRLRTDPKYYRSKDEIADLLHKIPHGA--KLLKVVDRLKDGL 230

Query: 313 ----ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
               + G     FEELG  Y+GPVDGH++  ++ +L++ K+    GPVL+HV+T+KGRGY
Sbjct: 231 KYLVVPG---MFFEELGFTYLGPVDGHDLKAVMTLLQQAKSA--NGPVLVHVLTQKGRGY 285

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE   D++HGV  FD  TG   K+     SYT  F + L+  A  ++ +V I AAM G
Sbjct: 286 KPAESNPDRFHGVGPFDVETGNIKKAEGGPPSYTEVFGKTLVKLARDNEKIVGITAAMPG 345

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGLNLF + +P R FDVGIAEQHA+T AAGLA  G +P  AIYS+FMQRAYDQV+HDV 
Sbjct: 346 GTGLNLFAKEYPARYFDVGIAEQHAITMAAGLAASGYRPVTAIYSTFMQRAYDQVLHDVC 405

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPV FA+DRAGLVG DGPTH G FD++F+  +PN+V++AP DE EL H + T A + 
Sbjct: 406 LQNLPVTFALDRAGLVGDDGPTHHGVFDLSFLRNIPNLVIVAPKDENELQHALHT-AILH 464

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P   RYPRG G G+EL    K +PL  GKG +L +GE V LL  G  V+  L A+  L
Sbjct: 465 PGPMAVRYPRGAGTGIELDRELKALPL--GKGEVLRKGEDVLLLAVGNLVEEALKAADAL 522

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
            + G+R  V + RF KPLD  LI + A+    ++T+EE  + GGFGS V++ L   GL D
Sbjct: 523 AAEGVRAAVVNPRFIKPLDRELILTYARLTRNVVTIEEHVLMGGFGSAVLELLESAGLAD 582

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
             VK   L +PD +++HG P    A  GL    I  TV N
Sbjct: 583 CKVKR--LGIPDSFVEHGKPGILKANLGLNAEEIVKTVLN 620


>gi|410664504|ref|YP_006916875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Simiduia agarivorans SA1 =
           DSM 21679]
 gi|409026861|gb|AFU99145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Simiduia agarivorans SA1 =
           DSM 21679]
          Length = 634

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/641 (47%), Positives = 414/641 (64%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E    RP TPLLD++N P  ++ L    L QLA ELR  +++ V +TGGH G+ LGV+EL
Sbjct: 4   EIPRSRPATPLLDSVNSPEALRALDTAALDQLAHELRHFLLYCVGQTGGHFGAGLGVVEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYV+N P D+++WDVGHQTYPHKILTGRR++M +MRQ  GL+GF KR+ES +D FG
Sbjct: 64  TIALHYVYNTPADKLVWDVGHQTYPHKILTGRREQMLSMRQRGGLAGFPKRTESAFDSFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+G  + G  N  VA+IGDGAMT G A+EA+ +A + ++DM+VILN
Sbjct: 124 VGHSSTSISAALGMALGHQMAGLDNKTVAIIGDGAMTGGMAFEALTHAAHTETDMLVILN 183

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+           VG L++  SR+ +++    LRE ++ V  +I     E A + 
Sbjct: 184 DN-NMSISKN--------VGGLATYFSRIWASKTYNSLREGSRKVLSKIPSAW-EFAKRT 233

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+ +GM+  S  TLFEELG  Y+GP+DGH+ + LV  L  +++ K  GP L+HV+T+KG
Sbjct: 234 EEHMKGMV--SPGTLFEELGFNYVGPIDGHDTERLVHYLSNLRDIK--GPKLLHVITQKG 289

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           RG+  AE     YH + K +P       ++ +   +   F + L   A  D  +V I  A
Sbjct: 290 RGFEPAEADPVGYHALNKIEPKRPVTDPAAPKKPKFQDVFGDWLCDTATQDARLVGITPA 349

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+G+  F R FP +  DV IAEQHAVT AAGLACEG KP  AIYS+F+QRAYDQ++H
Sbjct: 350 MCEGSGMVRFAREFPHQFHDVAIAEQHAVTLAAGLACEGQKPVVAIYSTFLQRAYDQLIH 409

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V F +DRAGLVG DGPTH G+FD++FM C+PNMV+ APSDE E   ++ +A 
Sbjct: 410 DVAIQNLDVTFGIDRAGLVGEDGPTHAGAFDLSFMRCVPNMVIAAPSDENECRKLLTSAY 469

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
                P+  RYPRG G GV +    +  PL VGKG  L +G+ +A+L +GT     L ++
Sbjct: 470 QYPG-PAAVRYPRGTGTGVTIE--TELTPLPVGKGVQLRQGKDIAILNFGT-----LLSN 521

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDG 664
           AL  ++ L  +V D R+ KPLD  L+ ++AK H +L+T+EE ++ GG GS V++ L   G
Sbjct: 522 ALPAADQLNASVCDMRWVKPLDETLVLTMAKQHSLLVTLEENAVAGGAGSAVLELLNSHG 581

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L    V    L LPDRY++HG  A+ LA A L    I A +
Sbjct: 582 L---CVPVLQLGLPDRYVEHGKQAEMLADAELNADAILARI 619


>gi|417841999|ref|ZP_12488094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M19501]
 gi|341947779|gb|EGT74420.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M19501]
          Length = 625

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 305/638 (47%), Positives = 413/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG + +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K + +  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKHNTKP-TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P      L +GK R++ EG+++A+L +GT     L  SAL  +  L 
Sbjct: 475 RYPRGNAIGVELTPLEM---LPIGKSRLIREGQKIAILNFGT-----LLPSALEPAEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA+SH+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMIDVLAQSHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA   L    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALADLRLDTKGIEEKILNFIAK 621


>gi|16273346|ref|NP_439591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae Rd
           KW20]
 gi|145629448|ref|ZP_01785246.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|260580725|ref|ZP_05848551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           RdAW]
 gi|1175801|sp|P45205.1|DXS_HAEIN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|1574278|gb|AAC23088.1| 1-deoxyxylulose-5-phosphate synthase (dxs) {Escherichia coli)
           [Haemophilus influenzae Rd KW20]
 gi|144978291|gb|EDJ88055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|260092542|gb|EEW76479.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           RdAW]
          Length = 625

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 416/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|53728900|ref|ZP_00134615.2| COG1154: Deoxyxylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207695|ref|YP_001052920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165975663|ref|YP_001651256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149479|ref|YP_001968004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303252030|ref|ZP_07338201.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245020|ref|ZP_07527117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247194|ref|ZP_07529245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307253973|ref|ZP_07535825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258428|ref|ZP_07540169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262798|ref|ZP_07544425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|166198593|sp|A3MYS9.1|DXS_ACTP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229807523|sp|B3H050.1|DXS_ACTP7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229807524|sp|B0BSL0.1|DXS_ACTPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|126096487|gb|ABN73315.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875764|gb|ABY68812.1| 1-deoxyxylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914610|gb|ACE60862.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649460|gb|EFL79645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854185|gb|EFM86393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306856332|gb|EFM88484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306863177|gb|EFM95119.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867612|gb|EFM99459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871943|gb|EFN03660.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 617

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 310/641 (48%), Positives = 415/641 (64%), Gaps = 33/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AG+G+AV  + +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIS 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 PE-STLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAEND 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGYHGVPKFDPTCG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 412 IFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +    
Sbjct: 471 RYPRGNAQGVALAPMQA---LEVGKGKLIQQGQKVAILNFGP-----LLNEARIVAEKHN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KPLD  L+  LA SHE+L+T+EE +I GG GS V ++L + G      K R
Sbjct: 523 YTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIR 576

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           PLV+   PD ++   + A+  A  GL  + I   +  ++ Q
Sbjct: 577 PLVMLGIPDFFVPQATQAESYADLGLDAAGIEQRIQAVVNQ 617


>gi|378697712|ref|YP_005179670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           10810]
 gi|301170228|emb|CBW29832.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Haemophilus influenzae 10810]
          Length = 620

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/639 (47%), Positives = 417/639 (65%), Gaps = 26/639 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 184 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 471 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 523 ATVVDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 580

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 712
            L LPD +I   +  + LA  GL    I   + + + +T
Sbjct: 581 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILSFIQKT 618


>gi|344940448|ref|ZP_08779736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacter
           tundripaludum SV96]
 gi|344261640|gb|EGW21911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacter
           tundripaludum SV96]
          Length = 620

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 308/633 (48%), Positives = 413/633 (65%), Gaps = 27/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ LS  +LK LA ELR  +   VS +GGH  + LG +ELT+ALHYVF+
Sbjct: 8   PLLKDINTPADVRKLSKSQLKPLAKELRDFLTHTVSISGGHFSAGLGTVELTIALHYVFD 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGR+D+M T+R  DG+S F  R+ESEYD FG GHSSTSIS
Sbjct: 68  TPSDQLVWDVGHQAYPHKILTGRKDRMTTIRTKDGVSAFPSRAESEYDAFGVGHSSTSIS 127

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+  +LKG    +VA+IGDG++T G A+EAMN+AG LD++++VILNDN  +S+  
Sbjct: 128 AALGMAIASELKGEDKKMVAIIGDGSITGGMAFEAMNHAGALDANLLVILNDN-DMSIS- 185

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGA+++ L+++ S++    +RE +K     +   + ELA + +E+ +GM+ 
Sbjct: 186 -------PPVGAMNNYLTKILSSKFYSSMREGSKKALSSMPS-VWELARRTEEHMKGMV- 236

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEELG  YIGP+DGH++D LV+ LE +K+   TGP  +H+VT+KG+GYP AEK 
Sbjct: 237 -VPGTLFEELGFNYIGPIDGHDIDMLVSTLENLKH--ITGPRFLHIVTQKGKGYPPAEKD 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
              YHGV  FDP+     KS+     +YT  F E L   A  D+ ++ I  AM  G+GL 
Sbjct: 294 PLAYHGVPAFDPSKDCLPKSAPSPHPTYTEVFGEWLCDMAAKDERLLGITPAMREGSGLV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + +P R FDV IAEQHAVT AAG AC+G KP  AIYS+F+QRAYDQ++HDV +Q L 
Sbjct: 354 KFSQCYPRRYFDVAIAEQHAVTLAAGQACQGAKPVVAIYSTFLQRAYDQMIHDVAIQNLD 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVG DGPTH GSFD ++M C+PNM+VMAP+DE E   M+ T   + + P+ 
Sbjct: 414 VLFALDRAGLVGPDGPTHAGSFDYSYMRCIPNMLVMAPADENECRQMLYT-GFMHEGPAS 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G GV +      +PL  GK  +  +G R+A+L +G+ V   + A   L +   
Sbjct: 473 VRYPRGKGPGVAVDKTMTALPL--GKAEVRHQGSRIAILAWGSMVTPAMEAGKQLGA--- 527

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KP+D  L+  LAKSHEVLITVEE  + GG GS V  FL    +L   +  
Sbjct: 528 --TVVNMRFVKPIDTELVLELAKSHEVLITVEENVLAGGAGSAVNDFLQAQQILMPVLN- 584

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             + LPD +++ G+  + LA  GL    I A V
Sbjct: 585 --IGLPDSFVEQGTREELLALCGLDIQGILAKV 615


>gi|307260666|ref|ZP_07542358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869743|gb|EFN01528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 639

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 313/644 (48%), Positives = 415/644 (64%), Gaps = 36/644 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AG+G+AV  + +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIS 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 PE-STLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAEND 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGYHGVPKFDPTCG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 412 IFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +    
Sbjct: 471 RYPRGNAQGVALAPMQA---LEVGKGKLIQQGQKVAILNFGP-----LLNEARIVAEKHN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KPLD  L+  LA SHE+L+T+EE +I GG GS V ++L + G      K R
Sbjct: 523 YTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIR 576

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIA---ATVFNILGQ 711
           PLV+   PD ++   + A+  A  GL  + I      V N  GQ
Sbjct: 577 PLVMLGIPDFFVPQATQAESYADLGLDAAGIEQRIQAVVNTAGQ 620


>gi|319776298|ref|YP_004138786.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           F3047]
 gi|317450889|emb|CBY87114.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3047]
          Length = 621

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 415/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 184 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 471 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 523 PTVVDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 580

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 581 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 617


>gi|303250727|ref|ZP_07336923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251739|ref|ZP_07533643.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650397|gb|EFL80557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860825|gb|EFM92834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 617

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 310/641 (48%), Positives = 415/641 (64%), Gaps = 33/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AG+G+AV  + +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIS 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 PE-STLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAEND 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGYHGVPKFDPTCG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 412 IFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +    
Sbjct: 471 RYPRGNAQGVVLAPMQA---LEVGKGKLIQQGQKVAILNFGP-----LLNEARIVAEKHN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KPLD  L+  LA SHE+L+T+EE +I GG GS V ++L + G      K R
Sbjct: 523 YTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIG------KIR 576

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           PLV+   PD ++   + A+  A  GL  + I   +  ++ Q
Sbjct: 577 PLVMLGIPDFFVPQATQAESYADLGLDAAGIEQRIQAVVNQ 617


>gi|344338417|ref|ZP_08769349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocapsa marina 5811]
 gi|343801699|gb|EGV19641.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocapsa marina 5811]
          Length = 640

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 319/638 (50%), Positives = 409/638 (64%), Gaps = 26/638 (4%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           S  P  PLLD I+ P  ++ L    L+ LA ELRA +I +VS+TGGHL + LGV+ELT+A
Sbjct: 7   SAPPQYPLLDLIDDPTDLRALPSSALRPLASELRAFLIDSVSRTGGHLAAGLGVVELTIA 66

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LH VF+ P DRI+WDVGHQ YPHKILTGRR +M  +RQ  G+SGF KRSES YD FG GH
Sbjct: 67  LHRVFDTPHDRIVWDVGHQAYPHKILTGRRQRMGGLRQKGGISGFPKRSESVYDTFGVGH 126

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTS+SA LGM++   LKG    VVAVIGDG++ AG A+EA+N+ G LD D++VILNDN 
Sbjct: 127 SSTSLSAALGMSIAARLKGESRQVVAVIGDGSLGAGMAFEALNHGGPLDPDLLVILNDN- 185

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
           ++S+         PPVGALS  L+ L S R    +RE +K     +   + +   + +E+
Sbjct: 186 EMSIS--------PPVGALSKHLASLLSGRTYTNVREGSKQALASL-PELRQFVGRWEEH 236

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            +GM     STLFEELG  YIGP+DGH++D ++A L  +K  +  GP L+H++T+KGRGY
Sbjct: 237 LKGMF--MPSTLFEELGFNYIGPIDGHDLDAVIATLTNMK--QMPGPRLLHLITQKGRGY 292

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE++  +YHGV  FD ATG+         +YT  F E +   A  D  ++ I  AM  
Sbjct: 293 APAEQSPTRYHGVTPFDRATGRMHNKRGTGPTYTEVFGEWISDAAARDARLIGITPAMRE 352

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+GL  F  RFP R FDVGIAEQHAVT AAG+ACEGLKP  AIYSSF+QRAYDQ+VHDV 
Sbjct: 353 GSGLVQFSERFPDRYFDVGIAEQHAVTLAAGMACEGLKPVVAIYSSFLQRAYDQLVHDVC 412

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ L V  A+DRAGLVGADG TH GSFD++F    PN+V+ AP+DE E + ++ TA    
Sbjct: 413 LQGLDVTLAVDRAGLVGADGATHAGSFDLSFARTQPNLVIAAPADENECWQLLETAYQ-H 471

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P+  RYPRG G GV L  G + +P  +G+G I   G  +ALL +G+ V     A  +L
Sbjct: 472 PGPALVRYPRGTGPGVALKRGAETLP--IGRGEIRRMGRDIALLAFGSRVPPAEEAGRIL 529

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
           E+     TVA+ RF KPLD ALI  LA  H +L+TVEE +I GG GS V + LA  GL  
Sbjct: 530 EA-----TVANMRFVKPLDEALILELADRHRLLVTVEENAIAGGAGSAVSEVLAAHGL-- 582

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             V    L LPD  ++     +QL   GL  + I  +V
Sbjct: 583 -NVYCLHLGLPDLCLEQAGHEEQLRVCGLDAAGIVYSV 619


>gi|427402584|ref|ZP_18893581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
           45783]
 gi|425718390|gb|EKU81337.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
           45783]
          Length = 624

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 316/632 (50%), Positives = 415/632 (65%), Gaps = 29/632 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ IN P  ++ L   +L  LA ELR  ++ +VSKTGGHL S+LG +ELT+ALHYV++ 
Sbjct: 3   LLEKINDPSDLRKLPRTQLTPLAHELRQFLLESVSKTGGHLSSNLGTVELTIALHYVYDT 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DRI+WDVGHQTY HKILTGRR +M T+RQ +GLSGF KR ESEYD FGT HSSTSISA
Sbjct: 63  PRDRIVWDVGHQTYSHKILTGRRGRMPTLRQLNGLSGFPKRDESEYDTFGTAHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPT 254
            LGMA    +KG   + +AVIGDG+MTAG A+EA+NNAG  D  +++VILNDN  +S+  
Sbjct: 123 ALGMATAARIKGEDRHAIAVIGDGSMTAGMAFEALNNAGVEDDVNLLVILNDN-DMSIS- 180

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L+RL S +     + V K V   +  P+ +LA K++E+A+GM+ 
Sbjct: 181 -------PPVGALNRYLARLLSGQFYAAAKNVGKSV---LPAPVLDLARKLEEHAKGMV- 229

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +T+FEE G  YIGP+DGH++D L+  LE +K  K  GP  +HVVT+KG+GY  AE  
Sbjct: 230 -VPATMFEEFGFNYIGPIDGHDLDSLIPTLENIKKLK--GPQFLHVVTKKGQGYKLAEAE 286

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG  KF+   G +  ++    +YT  F   L   A  DK +V I  AM  G+G+  
Sbjct: 287 PILYHGTGKFNHLEGIKPSTAPGKITYTEVFGNWLCDMAAADKRLVGITPAMREGSGMVR 346

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P R FDVGIAEQH+VTF AG+A EGLKP  AIYS+F+QRAYDQ++HDV LQ L V
Sbjct: 347 FHQEYPQRYFDVGIAEQHSVTFGAGIATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDV 406

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ ++ C+PNMVVMA SDE E   M+ TA      P+  
Sbjct: 407 TFALDRAGLVGADGATHAGNYDLAYLRCIPNMVVMAASDENECRQMLTTAYHYPG-PAAV 465

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G+G ++      I  E+GKG +   G+ VALL +G+ V   L A   L++    
Sbjct: 466 RYPRGAGVGAQIAEALSSI--EIGKGEVRRTGKGVALLAFGSMVAPSLKAGDELDA---- 519

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD  L++ LA+ H+ L+TVEEG I GG G+ V++ LA  G+    +   
Sbjct: 520 -TVANMRFVKPLDVELVKRLAQEHDFLVTVEEGCIMGGAGAAVMEALAAAGIAKPVLN-- 576

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPD +ID G P   LA  GL    IAA++
Sbjct: 577 -LGLPDNFIDQGDPQALLASVGLDAKGIAASI 607


>gi|261380775|ref|ZP_05985348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
 gi|284796238|gb|EFC51585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
          Length = 629

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 309/639 (48%), Positives = 419/639 (65%), Gaps = 33/639 (5%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+PLLD I+ P  ++ L  ++L Q+A ELR  ++ +V KTGGH  S+LG +ELTVALHYV
Sbjct: 3   PSPLLDIIDTPQDLRCLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           ++ P+D ++WDVGHQ+YPHKILTGR+++MHTMRQ  GL+GF KRSESEYD FG GHSSTS
Sbjct: 63  YDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           I A LGMAV     G     VA+IGDGAMTAGQA+EA+N AG +D D++VILNDN+    
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           P     G +P    L+S + R   +  L  ++  +  V  ++ G M ELA KV+   + +
Sbjct: 183 PNV---GALPKY--LASNVVR-DMHGLLSTIKAQSSKVLDKLPGAM-ELAQKVENKIKTL 235

Query: 313 I-----SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
                 +    +LFE  G  Y GPVDGHNV++LV +L++++  K  GP L+HV+T+KG G
Sbjct: 236 AGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRGRK--GPQLLHVITKKGNG 293

Query: 368 YPYAEKAADKYHGVAKF-DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           Y +AE    KYH V+K        + K +A   +YT  F + L  +A  D+ +VAI  AM
Sbjct: 294 YKFAENDPVKYHAVSKLPSEVPAPEVKPAAAKPTYTQVFGQWLCDQAAADERLVAITPAM 353

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             G+GL  F +RFP R FDVGIAEQHAVTFA GLACEG+KP  AIYS+F+QRAYDQ+VHD
Sbjct: 354 REGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHD 413

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V LQ LPV FA+DRAG+VGADGPTH G +D++F+ C+PNM++ APSDE E   +++T   
Sbjct: 414 VALQNLPVLFAIDRAGIVGADGPTHAGLYDLSFLRCVPNMIIAAPSDENECRLLLSTCYQ 473

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            +  PS  RYPRG G G  +  G + +  E+GKG I  EGE++A++ +G+ V     A +
Sbjct: 474 ANS-PSAVRYPRGTGTGATVSDGLETV--EIGKGIIRREGEKIAIIAFGSMV-----APS 525

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGL 665
           L  ++ L  TVAD RF KP+D  LI  LA+SH+ ++T EE +  GG GS V++ LA+ G+
Sbjct: 526 LTAADKLNATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSAVLEVLAKHGI 585

Query: 666 LDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLTPSHI 701
                  +P++L    D+  +HG P   L   GL+   I
Sbjct: 586 C------KPVLLLGVEDKVTEHGDPKKLLDDLGLSAEAI 618


>gi|261867965|ref|YP_003255887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|365967756|ref|YP_004949318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans ANH9381]
 gi|415768813|ref|ZP_11483967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-2]
 gi|416077118|ref|ZP_11585742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype b str. SCC1398]
 gi|444346553|ref|ZP_21154517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype c str. AAS4A]
 gi|261413297|gb|ACX82668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|348004255|gb|EGY44778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype b str. SCC1398]
 gi|348657659|gb|EGY75245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-2]
 gi|365746669|gb|AEW77574.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans ANH9381]
 gi|443541371|gb|ELT51798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype c str. AAS4A]
          Length = 616

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 308/638 (48%), Positives = 420/638 (65%), Gaps = 28/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L Q+  ELR  ++ +VS++ GHL S LG +ELTVALHYVF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCQELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ  GL  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+A+  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+RL S      LRE  K +   +  P+ E   K +E+ +G +S
Sbjct: 184 N--------VGALNNHLARLLSGSFYSSLREGGKKILSGV-PPIKEFVKKTEEHVKGFVS 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
             GST+FEELG  YIGP+DGHNV++L++ L+ + + K  GP  +H+VT+KG+GY  AEK 
Sbjct: 235 -PGSTMFEELGFNYIGPIDGHNVEELISTLQNMSSLK--GPQFLHIVTKKGKGYTPAEKD 291

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KF+  +G+  KS+A T +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 292 PIGFHGVPKFNHLSGELPKSNA-TPTYSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVE 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 351 FSQRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PN+V+M PSDE E   M+ T      +P+  
Sbjct: 411 LFAIDRAGIVGADGQTHQGAFDISFMRCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAV 469

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GVEL P     PLE+GK +++ EG+++A+L +GT     L  +AL  +  L 
Sbjct: 470 RYPRGNAVGVELEPLQ---PLELGKSKLIREGKKIAILNFGT-----LLPNALQVAEKLN 521

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KPLD A I ++AK HE+++T+EE ++ GG GS V + L         VK  
Sbjct: 522 ATVIDMRFVKPLDAARINAVAK-HELIVTLEENALQGGAGSAVAEVLNHQ---QHQVKLL 577

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I  G+ ++ L +  L  + I   + N LG+
Sbjct: 578 QLGLPDFFIPQGTQSEMLTELKLDAAGIEWQILNYLGE 615


>gi|120555349|ref|YP_959700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter aquaeolei
           VT8]
 gi|120325198|gb|ABM19513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter aquaeolei
           VT8]
          Length = 643

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 311/651 (47%), Positives = 419/651 (64%), Gaps = 31/651 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  SQRP TPLLD I+ P  ++ L   +L +LA ELRA ++++V +TGGH G+ LGV+EL
Sbjct: 9   EIPSQRPNTPLLDRIDVPSQLRELPAEDLPRLARELRAFLLWSVGQTGGHFGAGLGVLEL 68

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHYVFN P+DR++WDVGHQ YPHKILTGR+++M ++R+  GL+GF KR+ESEYD FG
Sbjct: 69  TVALHYVFNTPEDRLVWDVGHQAYPHKILTGRKEQMGSIRRKGGLAGFPKRAESEYDTFG 128

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+   ++      +AVIGDGAMTAG A+EA+N+AG+L +DM+V+LN
Sbjct: 129 VGHSSTSISAALGMAIAARMQNTGRKSIAVIGDGAMTAGMAFEALNHAGHLHADMLVVLN 188

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAK 304
           DN  +S+           VG LS+  ++L S+R   ++R+ +K V K  G P +  LA K
Sbjct: 189 DN-DMSISRN--------VGGLSNYFAKLLSSRTYNQVRDSSKKVLK--GTPHLMALAKK 237

Query: 305 VDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEK 364
            +E+ +GMI  +  TLFEELG  YIGP+DGH++  LV  LE ++  +  GP  +HVVT K
Sbjct: 238 TEEHFKGMI--APGTLFEELGFNYIGPIDGHDLPLLVETLENIRELE--GPQFLHVVTTK 293

Query: 365 GRGYPYAEKAADKYHGVAKFDPATGKQ---FKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           G+G+  AE     YH + K +P    +    K    +  Y   F + L   AE D  V  
Sbjct: 294 GKGFAPAEADPIGYHAINKIEPVPASKPEPVKPKPASPKYANVFGQWLCDAAEQDSRVAG 353

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F  RFP R FDV IAEQHAVT AAGLAC+G KP  AIYS+F+QRAYD
Sbjct: 354 ITPAMCEGSDLLAFSERFPDRYFDVAIAEQHAVTLAAGLACDGAKPVVAIYSTFLQRAYD 413

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q+VHDV +Q L V FA+DRAGLVG DGPTH G+FD++++ C+PNM+VM PSDE E   ++
Sbjct: 414 QLVHDVAIQNLDVLFAIDRAGLVGEDGPTHAGAFDISYLRCIPNMLVMTPSDENETRQLL 473

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSC 601
            T       P+  RYPRG G G E+    +  PL +GKGR + +G  +A+L +GT     
Sbjct: 474 HTGLEYCG-PAAVRYPRGTGPGAEIQ--QQLTPLPIGKGRRVRDGSGIAILNFGT----- 525

Query: 602 LAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFL 660
           L A  L  +  L  TVAD RF KPLD AL+  LA++H++L+T+EE  + GG GS V +FL
Sbjct: 526 LLAPGLEAAEALGATVADMRFVKPLDEALVLELAETHDLLVTLEENVVAGGAGSAVTEFL 585

Query: 661 AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
               +   ++    L LPD +++HG   + L   GL    I  ++   + Q
Sbjct: 586 NARQV---SMPVLQLGLPDAFVEHGQHKELLRDCGLDADGIRRSIARRMEQ 633


>gi|148826942|ref|YP_001291695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittGG]
 gi|166198621|sp|A5UEV6.1|DXS_HAEIG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148718184|gb|ABQ99311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittGG]
          Length = 625

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 415/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ  G+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDG++TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENASRKTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ EG+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIREGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|350551593|ref|ZP_08920807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodospira sibirica
           ATCC 700588]
 gi|349796960|gb|EGZ50741.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodospira sibirica
           ATCC 700588]
          Length = 622

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 309/623 (49%), Positives = 412/623 (66%), Gaps = 26/623 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+LD I+ P  ++ LS  EL  LA ELR  ++ +V++TGGHL ++LG +ELT+ALHY+F+
Sbjct: 7   PILDRIHTPQDLRTLSEHELPALACELRQFLLESVARTGGHLAANLGTVELTIALHYLFD 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ+Y HKILTGR+ KMHT+R   GLSGF KR ESEYD FG GHSSTSIS
Sbjct: 67  TPYDRLVWDVGHQSYAHKILTGRKTKMHTLRSRGGLSGFPKREESEYDSFGVGHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG     VA+IGDGAMTAG A+EA+N+AG   SD++VILNDN+    P 
Sbjct: 127 AALGMALAARQKGEARRSVAIIGDGAMTAGMAFEALNHAGGNKSDILVILNDNEMSISPN 186

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGA+++ L+RL S      +RE +K V   +  PM E   + +E+ +GMI 
Sbjct: 187 ---------VGAMNNYLARLLSGPIYSNVREGSKRVLNHM-PPMREFMRRAEEHVKGMI- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEELG  Y GP+DGH++D L+ +L  + + K  GP L+HVVT+KG+GY  AEK 
Sbjct: 236 -VPGTLFEELGFNYYGPIDGHDLDGLLKMLRNLHSLK--GPRLLHVVTQKGKGYTPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KF+P  G   ++     +YT  F + L  +A+ D  +V I  AM  G+G+  
Sbjct: 293 PCTYHGVGKFNPDVGIDPQAKPVRPNYTEVFGQWLCDQAQADMRLVGITPAMREGSGMVA 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R  DVGIAEQHA+T AAG+ACEGLKP  AIYSSF+QRAYDQ+VHD+ LQ LPV
Sbjct: 353 FSQRFPERYHDVGIAEQHALTLAAGMACEGLKPVVAIYSSFLQRAYDQLVHDIALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
             A+DRAG+VG DG TH G+ D++FM C+PN+V+MAP+DE E   M++T  A+ ++P+  
Sbjct: 413 LLAIDRAGVVGPDGATHAGNLDLSFMRCVPNLVIMAPADENECRQMLSTGFAL-NQPAAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G  + PG + +PL  G+  I  +G ++A+L +G  +   + ASA+ E+  L 
Sbjct: 472 RYPRGCGPGTAMTPGLETLPL--GRAEIRRQGRKIAILAFGAPL---IEASAVAET--LD 524

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF  PLD  L+  LA SHE+L+TVE+  I GG GS V + LA       T    
Sbjct: 525 ATVVNMRFVAPLDENLVLELAASHELLVTVEDNVIAGGAGSAVAECLAHHA---QTTPLL 581

Query: 674 PLVLPDRYIDHGSPADQLAQAGL 696
            L LP+R+ +HGS  + L  AGL
Sbjct: 582 LLGLPNRFQEHGSREELLQDAGL 604


>gi|68250029|ref|YP_249141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           86-028NP]
 gi|81335547|sp|Q4QKG6.1|DXS_HAEI8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|68058228|gb|AAX88481.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           86-028NP]
          Length = 625

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 416/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA+L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVAMLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQH VTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHTVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATRQEALADLGLDTKGIEEKILNFIAK 621


>gi|319897072|ref|YP_004135267.1| 1-deoxy-d-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3031]
 gi|317432576|emb|CBY80936.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3031]
          Length = 621

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 416/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L Q+  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQVCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 184 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGATHQGAFDISFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 471 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 523 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 580

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 581 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 617


>gi|145638944|ref|ZP_01794552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|145271916|gb|EDK11825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|309750913|gb|ADO80897.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2866]
          Length = 625

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 416/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++F+ C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDISFIRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|392419664|ref|YP_006456268.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri CCUG
           29243]
 gi|390981852|gb|AFM31845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri CCUG
           29243]
          Length = 632

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/636 (47%), Positives = 416/636 (65%), Gaps = 26/636 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+L     P  ++ L   EL++LA+ELR +++++V  TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLGRAATPEQLRRLGEAELEELANELRQELLYSVGHTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +RSESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMATLRQKDGLAAFPRRSESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPVKPKKPSGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPQRYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + PG +  PLE+GK  +  EG +VALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNATIEPGLE--PLEIGKAVVRREGSKVALLVFGVQLPEALQVGETLDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SHE+L+T+EE SI  G GS V +FL  + +L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGSHELLVTIEENSIMAGAGSAVAEFLTGESILKPM 589

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +    L LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 590 LH---LGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|260583061|ref|ZP_05850843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           NT127]
 gi|260093912|gb|EEW77818.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           NT127]
          Length = 625

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/638 (47%), Positives = 416/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+++LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIEELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ +G+++A+L +GT     L  SAL  S  L 
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIRKGQKIAILNFGT-----LLPSALELSEKLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 527 ATVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEILNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + LA  GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621


>gi|344199834|ref|YP_004784160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrivorans SS3]
 gi|343775278|gb|AEM47834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrivorans SS3]
          Length = 624

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 316/631 (50%), Positives = 412/631 (65%), Gaps = 33/631 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  I  P  ++ +S  E K +A  +R  ++  VS+TGGHL S LG +ELTVALH VFN 
Sbjct: 4   LLKDIPMPAELRQMSRSEQKGVAKMVRQFLLETVSQTGGHLSSCLGAVELTVALHAVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+DR++WDVGHQ YPHKILTGR      +R  DGLSGF KR ES YD FG GHSSTSISA
Sbjct: 64  PEDRLIWDVGHQAYPHKILTGRGPLFPRLRIKDGLSGFLKRDESPYDSFGAGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV   L  +   VVA+IGDGAMTAG AYEA+NN G LD++++VILNDN ++S+   
Sbjct: 124 ALGMAVAAKLGHKSREVVAIIGDGAMTAGLAYEALNNGGVLDANLLVILNDN-EMSIS-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGA+S  L+R+ S R    +RE A G       P+ ELA K +E  +G+++ 
Sbjct: 181 ------PNVGAVSQYLTRILSGRLYNTVREGA-GQALSFVPPLRELAKKAEEGVKGLVAP 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEE+G +Y GP+DGH++D L+  LE +K  K  GP L+HV+T+KG+GY  AE+  
Sbjct: 234 G--TLFEEMGFHYFGPIDGHDLDTLIQTLENLK--KIRGPRLLHVITKKGKGYGPAEQDP 289

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHGV  F+   GK  K SA   SYT  F + L  +   +K +VAI  AM  G+GL  F
Sbjct: 290 CGYHGVTPFNQTDGKMAKKSAGAASYTQVFGDWLCDKGAAEKQLVAITPAMREGSGLVRF 349

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            + FP R FDVGIAEQHAVTFAAGLAC+G+ P  AIYS+F+QRAYDQ++HDV +Q LPV 
Sbjct: 350 AQLFPERYFDVGIAEQHAVTFAAGLACDGIHPVVAIYSTFLQRAYDQLLHDVAIQNLPVL 409

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G+FD+ +  C+PN+V+MAP DE E+  M+ T  A    P+  R
Sbjct: 410 FAIDRAGLVGADGATHQGAFDMAYARCIPNLVIMAPKDEQEMRDMLNTGFAYQG-PALVR 468

Query: 556 YPRGNGIGVELPPG-NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           YPRGNG G+ L    ++ IP  +G+  +L EG+ +A+L +GT   + + A A L++    
Sbjct: 469 YPRGNGRGLALDKDLSRQIP--IGRAEVLREGKELAILAFGTRAAAAMVAGAALDA---- 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD  L+ SLA+SH   +TVEEGS +GG GS V +FL  +G++      R
Sbjct: 523 -TVVNMRFVKPLDTELLTSLAQSHRAFLTVEEGSRMGGAGSAVAEFLLNEGVV------R 575

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHI 701
           PL L   PD +I+ G  +  LA  GL  + I
Sbjct: 576 PLRLLGFPDTFIEQGDASQWLADLGLDAAGI 606


>gi|456064024|ref|YP_007502994.1| deoxyxylulose-5-phosphate synthase [beta proteobacterium CB]
 gi|455441321|gb|AGG34259.1| deoxyxylulose-5-phosphate synthase [beta proteobacterium CB]
          Length = 634

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/638 (47%), Positives = 424/638 (66%), Gaps = 32/638 (5%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L++I+ P  +K L   +L  LADELR  V+ +VSKTGGHL S+LG +EL++ALHYVF+ P
Sbjct: 3   LNSIHSPADLKKLPREQLPALADELRQFVLDSVSKTGGHLSSNLGTVELSIALHYVFDTP 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +DRI+WDVGHQ+YPHKILTGRR++M+T+RQ DGLSGF +R+ESEYD FGTGHSSTSISA 
Sbjct: 63  QDRIVWDVGHQSYPHKILTGRRERMNTLRQFDGLSGFPRRAESEYDAFGTGHSSTSISAA 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTA 255
           +GMA     KG K   VAVIGD AMT G A+EAMNNAG Y D  ++VILNDN  +S+   
Sbjct: 123 MGMARAFQTKGEKQVAVAVIGDSAMTGGMAFEAMNNAGVYDDLPLVVILNDN-DMSIS-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGAL+  L+RL S       ++    V   I  P+ E A +++++A+GM+  
Sbjct: 180 ------PAVGALNRHLARLLSGNIYSATKKGIDSVLS-IAPPLREFAKRLEDHAKGMV-- 230

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN--TKTTGPVLIHVVTEKGRGYPYAEK 373
           S ST+F+E G  Y GP+DGH++D L+ +L+ V+    +  GP  +HVVT KG+GY  AE 
Sbjct: 231 SPSTIFQEFGFNYFGPIDGHDLDALIPMLQNVRRLALEGRGPQFLHVVTRKGQGYELAEA 290

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHG +KF+P  G +  +++  +++T  F E L   A  D  ++ I  AM  G+GL 
Sbjct: 291 DPVLYHGPSKFNPEEGVKKSTTSSQKTFTQVFGEWLCDMAHADPLLIGITPAMREGSGLV 350

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + FP R +DVGIAEQHAVTFAAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q LP
Sbjct: 351 EFEQNFPKRYYDVGIAEQHAVTFAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAIQDLP 410

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G++D+ F+ C+PNM+V+ P+DEAE   ++ TA      PS 
Sbjct: 411 VLFALDRAGLVGADGATHAGAYDIPFLRCIPNMLVLTPADEAECRDLLTTAFH-QPHPSA 469

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALL 608
            RYPRG GIG       + +PL  GKG +  +     G+R+A+L +GT +   L  +  +
Sbjct: 470 VRYPRGAGIGTIPSKELRTVPL--GKGELRRKSNAPTGQRIAILAFGTLLYPALEVAEQM 527

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
           ++     +VA+ RF KPLD  L++SLA+ H+  +T+E+G+I GG GS  ++ L+  G+  
Sbjct: 528 DA-----SVANMRFVKPLDLELLKSLAQDHDYFVTIEDGAIQGGAGSACLEALSAMGINK 582

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             ++   L LPD++++HG     +++ GL    IA  +
Sbjct: 583 PLLQ---LGLPDQFVEHGDYKLLMSKCGLDSEGIAKAI 617


>gi|418293778|ref|ZP_12905680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
 gi|379065163|gb|EHY77906.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
          Length = 632

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/636 (47%), Positives = 417/636 (65%), Gaps = 26/636 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR++M T+RQ DGL+ F +R ESEYD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLRQKDGLAAFPRRVESEYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPPAPKKPLGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + PG +  PLE+GK  +  +G +VALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNAAIEPGLE--PLEIGKAVVRRKGSKVALLVFGVQLPEALQVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA SHE+L+T+EE SI  G GS V +FL  + +L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGSHELLVTIEENSIMAGAGSAVAEFLTGESILKPM 589

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +    L LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 590 LH---LGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|319639352|ref|ZP_07994103.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102]
 gi|317399536|gb|EFV80206.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria mucosa C102]
          Length = 629

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 308/635 (48%), Positives = 416/635 (65%), Gaps = 33/635 (5%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+PLLD I+ P  ++ L  ++L Q+A ELR  ++ +V KTGGH  S+LG +ELTVALHYV
Sbjct: 3   PSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           ++ P+D ++WDVGHQ+YPHKILTGR+++MHTMRQ  GL+GF KRSESEYD FG GHSSTS
Sbjct: 63  YDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           I A LGMAV     G     VA+IGDGAMTAGQA+EA+N AG +D D++VILNDN+    
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           P     G +P    L+S + R   +  L  ++  +  V  ++ G M ELA KV+   + +
Sbjct: 183 PNV---GALPKY--LASNVVR-DMHGLLSTIKAQSSKVLDKLPGAM-ELAQKVENKIKTL 235

Query: 313 I-----SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
                 +    +LFE  G  Y GPVDGHNV++LV +L++++  K  GP L+HV+T+KG G
Sbjct: 236 AGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRGRK--GPQLLHVITKKGNG 293

Query: 368 YPYAEKAADKYHGVAKF-DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           Y +AE    KYH VAK        + K +A   +YT  F + L  +A  D+ +VAI  AM
Sbjct: 294 YKFAENDPVKYHAVAKLPSEVPAPEVKPAAAKPTYTQVFGQWLCDQATADERLVAITPAM 353

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             G+GL  F  +FP R FDVGIAEQHAVTFA GLACEG+KP  AIYS+F+QRAYDQ+VHD
Sbjct: 354 REGSGLVEFEHQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHD 413

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V LQ LPV FA+DRAG+VGADGPTH G +D++F+ C+PNM++  PSDE E   +++T   
Sbjct: 414 VALQNLPVLFAIDRAGIVGADGPTHAGLYDLSFLRCVPNMIIATPSDENECRLLLSTCYQ 473

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            +  PS  RYPRG G G  +  G + +  E+GKG I  EG+++A++ +G+ V   LAA  
Sbjct: 474 ANS-PSAVRYPRGTGTGATVLDGLETV--EIGKGIIRREGKKIAVIAFGSMVAPSLAA-- 528

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGL 665
              ++ L  TVAD RF KP+D  LI  LA+SH+ ++T EE +  GG GS V++ LA+ G+
Sbjct: 529 ---ADKLNATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSAVLEVLAKHGI 585

Query: 666 LDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLT 697
                  +P++L    D+  +HG P   LA  GL 
Sbjct: 586 C------KPVLLLGVEDKVTEHGDPKKLLADLGLN 614


>gi|307256234|ref|ZP_07538021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865415|gb|EFM97311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 617

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 414/641 (64%), Gaps = 33/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AG+G+AV  + +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIS 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 PE-STLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAEND 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGYHGVPKFDPTCG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 412 IFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +    
Sbjct: 471 RYPRGNAQGVALAPMQA---LEVGKGKLIQQGKKVAILNFGP-----LLNEARIVAEKYN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KPLD  L+  LA SHE+L+ +EE +I GG GS V ++L + G      K R
Sbjct: 523 YTLADMRFVKPLDEQLVAELADSHELLVALEENAIQGGAGSAVNEYLQKIG------KIR 576

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           PLV+   PD ++   + A+  A  GL  + I   +  ++ Q
Sbjct: 577 PLVMLGIPDFFVPQATQAEIYADLGLDAAGIEQRIQAVVNQ 617


>gi|74316897|ref|YP_314637.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiobacillus denitrificans
           ATCC 25259]
 gi|118595629|sp|Q3SKF1.1|DXS_THIDA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|74056392|gb|AAZ96832.1| deoxyxylulose-5-phosphate synthase [Thiobacillus denitrificans ATCC
           25259]
          Length = 618

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 317/625 (50%), Positives = 408/625 (65%), Gaps = 27/625 (4%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P  LLDTI  P  ++ L   EL  LA E+RA +I +V+ TGGHL S+LG +ELT+ALHYV
Sbjct: 2   PASLLDTIESPADLRALPAAELPGLAAEVRAFLIDSVAGTGGHLASNLGAVELTLALHYV 61

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           F+ P+DRI+WDVGHQ+Y HKILTGRRD M  +RQ  G++GF +R+ESE+D FGTGHSSTS
Sbjct: 62  FDTPRDRIVWDVGHQSYTHKILTGRRDAMQGLRQRGGIAGFPRRAESEFDAFGTGHSSTS 121

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           ISA LGMA      G     VAVIGDGAMTAG A+EA+NNAG  +  ++V+LNDN     
Sbjct: 122 ISAALGMAEAFHQLGSDQRAVAVIGDGAMTAGMAFEALNNAGATELPLLVVLNDNDMSIS 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           P          VGAL++ L+RL S R     R     V   +  P+ ELA + +E+ +GM
Sbjct: 182 PN---------VGALNNYLARLMSGRFYAAARRAGDKVLS-VAPPIRELAKRAEEHMKGM 231

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +  TLFEE G  YIGP+DGH++D LV  L  +++ +  GP  +HVVT KG+GY  AE
Sbjct: 232 V--TPGTLFEEFGFNYIGPIDGHDLDVLVNTLRNIRHLR--GPQFLHVVTRKGKGYTPAE 287

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHGVA+FDPA G   K + +  SYT  F + L   A  D  +V I  AM  G+GL
Sbjct: 288 TNPCLYHGVARFDPAAGVAEKRAGKP-SYTEVFGDWLCDMAASDPRLVGITPAMREGSGL 346

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F + FP R FDVGIAEQHA+TFAAGLACEG+KP  AIYS+F+QRAYDQ++HD+ LQ L
Sbjct: 347 VRFSQEFPERYFDVGIAEQHALTFAAGLACEGVKPVVAIYSTFLQRAYDQLIHDIALQNL 406

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  A+DRAGLVGADGPTH GSFD++F+ C+P++V+ APSDE E   +++T A + D P+
Sbjct: 407 PVTLAIDRAGLVGADGPTHAGSFDLSFLRCVPDLVIAAPSDENECRRLLST-AFLHDGPA 465

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G  + PG +  P+E+GKG     G  VALL +G+ V   L A+  L++  
Sbjct: 466 AVRYPRGCGTGAAIEPGLE--PVEIGKGVCRRRGRDVALLAFGSLVAPALTAAERLDA-- 521

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KPLD  L+  LA  H +L+T+EE    GG G+ V + LAQ G++   V 
Sbjct: 522 ---TVADMRFVKPLDVDLVGELAAGHRLLVTLEENAVAGGAGAAVAELLAQLGIV---VP 575

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGL 696
              L L D +I+HG  A  LA  GL
Sbjct: 576 VLQLGLSDVFIEHGDAAAMLAACGL 600


>gi|241759455|ref|ZP_04757559.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens
           SK114]
 gi|241320237|gb|EER56570.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria flavescens
           SK114]
          Length = 629

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/635 (48%), Positives = 417/635 (65%), Gaps = 33/635 (5%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+PLLD I+ P  ++ L  ++L Q+A ELR  ++ +V KTGGH  S+LG +ELTVALHYV
Sbjct: 3   PSPLLDIIDTPQDLRRLEKKQLPQVAAELREFLLDSVGKTGGHFASNLGAVELTVALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           ++ P+D ++WDVGHQ+YPHKILTGR+++MHTMRQ  GL+GF KRSESEYD FG GHSSTS
Sbjct: 63  YDTPEDHLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           I A LGMAV     G     VA+IGDGAMTAGQA+EA+N AG +D D++VILNDN+    
Sbjct: 123 IGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVILNDNEMSIS 182

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
           P     G +P    L+S + R   +  L  ++  +  V  ++ G M ELA KV+   + +
Sbjct: 183 PNV---GALPKY--LASNVVR-DMHGLLSTIKAQSSKVLDKLPGAM-ELAQKVENKIKTL 235

Query: 313 I-----SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
                 +    +LFE  G  Y GPVDGHNV++LV +L++++  K  GP L+HV+T+KG G
Sbjct: 236 AGEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRGRK--GPQLLHVITKKGNG 293

Query: 368 YPYAEKAADKYHGVAKF-DPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAM 426
           Y +AE    KYH VAK       ++ + +    +YT  F + L  +A  D+ ++AI  AM
Sbjct: 294 YKFAENDPVKYHAVAKLPSEVPAQEVQPAVVKPTYTQVFGQWLCDQAAADERLIAITPAM 353

Query: 427 GGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486
             G+GL  F ++FP R FDVGIAEQHAVTFA GLACEG+KP  AIYS+F+QRAYDQ+VHD
Sbjct: 354 REGSGLVEFEQQFPDRYFDVGIAEQHAVTFAGGLACEGIKPVVAIYSTFLQRAYDQLVHD 413

Query: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAA 546
           V LQ LPV FA+DRAG+VG+DGPTH G +D++F+ C+PNM++ APSDE E   +++T   
Sbjct: 414 VALQNLPVLFAIDRAGIVGSDGPTHAGLYDLSFLRCVPNMIIAAPSDENECRLLLSTCYQ 473

Query: 547 IDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASA 606
            +  PS  RYPRG G G  +  G + +  E+GKG I  EGE++A++ +G+ V   L A  
Sbjct: 474 TNS-PSAVRYPRGTGTGATVSDGLETV--EIGKGIIRREGEKIAVIAFGSMVAPSLTA-- 528

Query: 607 LLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGL 665
              ++ L  TVAD RF KP+D  LI  LA+SH+ ++T EE +  GG GS V++ LA+ G+
Sbjct: 529 ---ADNLNATVADMRFVKPIDEELIVRLARSHDYIVTAEENAEQGGAGSAVLEVLAKHGI 585

Query: 666 LDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLT 697
                  +P++L    D+  +HG P   LA  GL 
Sbjct: 586 C------KPVLLLGVEDKVTEHGDPKKLLADLGLN 614


>gi|198283750|ref|YP_002220071.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665347|ref|YP_002426381.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248271|gb|ACH83864.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517560|gb|ACK78146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 624

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 315/628 (50%), Positives = 413/628 (65%), Gaps = 27/628 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL +I  P  ++ +S  E K +A  +R  ++  VS+TGGHL S LG +ELTVALH VFN 
Sbjct: 4   LLKSIPMPAELRQMSRSEQKNVAKAVRHFLLETVSRTGGHLSSCLGAVELTVALHAVFNT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ YPHKILTGR  +   +R  DGLSGF KR ES YD FG GHSSTSISA
Sbjct: 64  PDDRLVWDVGHQAYPHKILTGRGARFPQLRIRDGLSGFLKRDESPYDSFGAGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           GLGMAV   L+ +   VVA+IGDGAMTAG AYEA+NN G LD+D++V+LNDN ++S+   
Sbjct: 124 GLGMAVAARLEHKSRQVVAIIGDGAMTAGLAYEALNNGGVLDADLLVVLNDN-EMSIS-- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                 P VGA+S  L+R+ S R    +RE A G       P+ ELA K +E  +G+++ 
Sbjct: 181 ------PNVGAVSRYLTRILSGRLYNTVREGA-GQALSFVPPLRELARKAEEGVKGLVTP 233

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
               LFEE+G +Y GP+DGH++D L+  LE +K  K  GP L+HV+T+KG+GY  AE   
Sbjct: 234 G--ALFEEMGFHYFGPIDGHDLDALIPTLENLK--KIRGPRLLHVITKKGKGYGPAELDP 289

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHGV  F+ + G+  K SA   SYT  F + L  +   +K +VAI  AM  G+GL  F
Sbjct: 290 CGYHGVTPFNRSDGRMAKKSAGAPSYTQVFGDWLCEKGAAEKHLVAITPAMREGSGLVRF 349

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            + FP R FDVGIAEQHAVTFAAGLAC+G+ P  AIYS+F+QRAYDQ++HDV +Q LPV 
Sbjct: 350 EQLFPERYFDVGIAEQHAVTFAAGLACDGIHPVVAIYSTFLQRAYDQLLHDVAIQNLPVL 409

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADG TH G+FD+ +  C+PN+V+MAP DE E+  M+ T  A    P+  R
Sbjct: 410 FAIDRAGLVGADGATHQGAFDIAYARCIPNLVIMAPKDEQEMRDMLNTGFAWQG-PALVR 468

Query: 556 YPRGNGIGVELPPG-NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           YPR NG+GV L    ++ IP  VGK  IL +G+ +A+L +GT   + +AA   L++    
Sbjct: 469 YPRDNGLGVALDRDLSRQIP--VGKAEILRKGKDLAILAFGTRAAAAMAAGETLDA---- 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD  L+ SLA++H   +TVEEG+ +GG GS V +FL  +G++   V  R
Sbjct: 523 -TVVNMRFVKPLDTELLTSLAQTHRAFLTVEEGARMGGAGSAVAEFLLNEGVV---VPMR 578

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHI 701
            L LPD +I+ G     LA  GL  + I
Sbjct: 579 LLGLPDIFIEQGDAGRWLADLGLDAAGI 606


>gi|77165220|ref|YP_343745.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani ATCC
           19707]
 gi|254434625|ref|ZP_05048133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani
           AFC27]
 gi|119368200|sp|Q3JAD1.1|DXS_NITOC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|76883534|gb|ABA58215.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani ATCC
           19707]
 gi|207090958|gb|EDZ68229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani
           AFC27]
          Length = 640

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/634 (47%), Positives = 411/634 (64%), Gaps = 27/634 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ I+ P  ++ L   +L+ LA+ELR  ++ +V+++GGHL + LG IELT+ALHY+F 
Sbjct: 8   PLLEQIDSPERLRRLPESDLETLAEELRDFLLHSVARSGGHLAAGLGTIELTIALHYIFA 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ YPHK+LTGRR+++ T+RQ  GL+ F  R ES YD FG GHSSTSIS
Sbjct: 68  TPEDRLVWDVGHQAYPHKVLTGRRERLGTIRQAGGLAPFPSRHESPYDTFGVGHSSTSIS 127

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+  + KG K   VA+IGDG MTAG AYEA+++AG L +D++VILNDN+    P 
Sbjct: 128 AALGMAIAANEKGEKRKTVAIIGDGGMTAGMAYEALDHAGALGADLLVILNDNEMSISPN 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGA+SS L+RL S R    +RE +K V +++  PM ELA + +E+ +GM+ 
Sbjct: 188 ---------VGAISSYLTRLLSGRVYSTVREGSKKVLERMPPPMWELARRTEEHVKGMV- 237

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
            +  TLFEE+G  Y GP+DGH++  L+  L  +   K TGP L+H+VT KG+GY  AE+ 
Sbjct: 238 -APGTLFEEMGFNYFGPIDGHDLSSLIRTLRNLH--KLTGPRLLHIVTCKGKGYTLAEEN 294

Query: 375 ADKYHGVAKFDPATGKQF--KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
              YHGV  FDP  G Q   +  +   SYT  F++ L   A  D  +V I  AM  G+GL
Sbjct: 295 PVTYHGVTPFDPKVGIQQGPQKPSSAMSYTQVFSQWLCDMAAQDGLLVGITPAMREGSGL 354

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F   FP R FDV IAEQH+VT AAG+AC+GLKP  AIYS+F+QRAYDQ++HDV LQ L
Sbjct: 355 VKFSECFPERYFDVAIAEQHSVTLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDVALQNL 414

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAG+VG DGPTH GSFD+T++ C+PN+VVMAP+DE E   M+ T   + ++P+
Sbjct: 415 PVLFAIDRAGVVGPDGPTHAGSFDLTYLRCIPNLVVMAPADENECRQMLYTGFLL-NQPA 473

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV +      +PL  GK  +  +G  +A+L +G  V   L A+  L++  
Sbjct: 474 AVRYPRGKGPGVAVEASMTALPL--GKAELKRKGRGIAILAFGATVAPALEAAEKLDA-- 529

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TV + RF KPLD  L+  +A +HE+L+TVE+  I GG GS V + LA  G+   +V 
Sbjct: 530 ---TVVNMRFVKPLDEDLVLEMAMNHELLVTVEDNVIAGGAGSAVSECLAYHGV---SVP 583

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
                LPD +++HGS    L Q  L    I   V
Sbjct: 584 LLLHGLPDNFLEHGSREALLEQCHLNAEGILQRV 617


>gi|307249421|ref|ZP_07531412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858563|gb|EFM90628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 617

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 415/641 (64%), Gaps = 33/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AG+G+AV  + +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIS 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 PE-STLFEELGFNYIGPIDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAEND 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP+ G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGYHGVPKFDPSCG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 412 IFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +    
Sbjct: 471 RYPRGNAQGVALAPMQA---LEVGKGKLIQQGQKVAILNFGP-----LLNEARIVAEKHN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KPLD  L+  LA SHE+L+ +EE +I GG GS V ++L + G      K R
Sbjct: 523 YTLADMRFVKPLDEQLVAELADSHELLVALEENAIQGGAGSAVNEYLQKIG------KIR 576

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           PLV+   PD ++   + A+  A  GL  + I   +  ++ Q
Sbjct: 577 PLVMLGIPDFFVPQATQAEIYADLGLDAAGIEQRIQAVVNQ 617


>gi|387121992|ref|YP_006287875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|415756050|ref|ZP_11480960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-3]
 gi|416038199|ref|ZP_11574059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
 gi|416048347|ref|ZP_11576288.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gi|416068223|ref|ZP_11582702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
 gi|429732220|ref|ZP_19266838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans Y4]
 gi|347993222|gb|EGY34598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gi|347995141|gb|EGY36352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
 gi|348001257|gb|EGY42008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
 gi|348655888|gb|EGY71314.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-3]
 gi|385876484|gb|AFI88043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|429156847|gb|EKX99467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans Y4]
          Length = 616

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 307/638 (48%), Positives = 421/638 (65%), Gaps = 28/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L Q+  ELR  ++ +VS++ GHL S LG +ELTVALHYVF 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQVCYELREYLLESVSQSSGHLASGLGTVELTVALHYVFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ  GL  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+A+  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAIAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+RL S      +RE  K +   +  P+ E   K +E+ +G++S
Sbjct: 184 N--------VGALNNHLARLLSGSFYSSIREGGKKILSGV-PPIKEFVKKTEEHVKGLVS 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
             GST+FEELG  YIGP+DGHNV++L++ L+ + + K  GP  +H+VT+KG+GY  AEK 
Sbjct: 235 -PGSTMFEELGFNYIGPIDGHNVEELISTLQNMSSLK--GPQFLHIVTKKGKGYTPAEKD 291

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KF+  +G+  KS+A T +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 292 PIGFHGVPKFNHLSGELPKSNA-TPTYSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVE 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 351 FSQRFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PN+V+M PSDE E   M+ T      +P+  
Sbjct: 411 LFAIDRAGIVGADGQTHQGAFDISFMRCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAV 469

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GVEL P     PLE+GK +++ EG+++A+L +GT     L  +AL  +  L 
Sbjct: 470 RYPRGNAVGVELEPLQ---PLELGKSKLIREGKKIAILNFGT-----LLPNALQVAEKLN 521

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KPLD A I ++AK HE+++T+EE ++ GG GS V + L         VK  
Sbjct: 522 ATVIDMRFVKPLDAARINAVAK-HELIVTLEENALQGGAGSAVAEVLNHQ---QHQVKLL 577

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I  G+ ++ L +  L  + I   + N LG+
Sbjct: 578 QLGLPDFFIPQGTQSEMLTELKLDAAGIEWQILNYLGE 615


>gi|121610224|ref|YP_998031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter eiseniae
           EF01-2]
 gi|166201545|sp|A1WN06.1|DXS_VEREI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|121554864|gb|ABM59013.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter eiseniae
           EF01-2]
          Length = 631

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 309/631 (48%), Positives = 419/631 (66%), Gaps = 33/631 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+TI+ P  ++ L+  +LK LA ELR  V+ +VS+TGGHL S+LG +ELTVALH+VF 
Sbjct: 7   PLLETIDDPAQLRQLARAQLKVLAAELRGFVLESVSRTGGHLSSNLGTVELTVALHHVFQ 66

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQTY HKILTGRR++MHT+RQ  G+SGF +R ES YD FGT HSSTSIS
Sbjct: 67  TPHDRLVWDVGHQTYAHKILTGRRERMHTLRQQGGISGFPQRGESVYDTFGTAHSSTSIS 126

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG   + VA+IGDGAM+AG A+EA+NNAG  D +++V+LNDN  +S+  
Sbjct: 127 AALGMALAAKRKGESRHTVAIIGDGAMSAGMAFEALNNAGVADCNLLVVLNDN-DMSIS- 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGAL+  L++L S R     + + K V + +  P+ E A + ++ A+G++ 
Sbjct: 185 -------PPVGALNRYLAQLMSGRFYAAAKNMGKTVLRPM-PPLLEFAKRFEQQAKGLV- 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              +TLFE+ G  YIGP+DGH++D L+  L+ +K  +  GP  +HVVT+KG+GY  AE  
Sbjct: 236 -VPATLFEKFGFNYIGPIDGHDLDSLIPTLDNIKGLQ--GPQFLHVVTKKGQGYKLAEAD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHG A+FDPA G    S+A   ++T  F + L   A  D+ +V I  AM  G+G+  
Sbjct: 293 PVAYHGPARFDPAVGLVKSSTAPRLTFTQVFGQWLCDMAAHDERLVGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R +DVGIAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ++HDV LQ LPV
Sbjct: 353 FEQRFPDRYYDVGIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLIHDVALQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++++A A  + P   
Sbjct: 413 VFALDRAGLVGADGATHAGAYDIAFLRCIPNMGLACPADERECRQLLSSAYA-QNHPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-------RVALLGYGTAVQSCLAASAL 607
           RYPRG+G GV    G  G+P   GKG I  E +       R+A+L +G+     L   AL
Sbjct: 472 RYPRGSGAGVAPLAGLDGLPF--GKGEIRRERQRQDSNAPRIAILAFGS-----LLYPAL 524

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
             ++ L  TV + R+ KPLD AL+R +A+ H+ L+T+EEG+I GG GS V + L   G+L
Sbjct: 525 EAADALDATVVNMRWAKPLDDALLRQVAEGHDALVTLEEGAIMGGAGSAVTETLNAAGIL 584

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 697
              ++   L L D +I+HG PA  LA  GL 
Sbjct: 585 RPVLQ---LGLADIFIEHGDPAKLLAMQGLN 612


>gi|347819270|ref|ZP_08872704.1| 1-deoxy-D-xylulose-5-phosphate synthase [Verminephrobacter
           aporrectodeae subsp. tuberculatae At4]
          Length = 631

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 312/637 (48%), Positives = 420/637 (65%), Gaps = 40/637 (6%)

Query: 72  PPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHY 131
           P  PLL TI+ P  ++ L+  +L+ LA ELR  ++ +VS+TGGHL S+LG +ELT+ALH+
Sbjct: 4   PSFPLLQTIDDPADLRRLTRADLQTLATELRGFMLESVSRTGGHLSSNLGTVELTLALHH 63

Query: 132 VFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSST 191
           VF+ P DR++WDVGHQTY HKILTGRR++MHT+RQ DG+SGF +R+ES YD FGT HSST
Sbjct: 64  VFDTPHDRLIWDVGHQTYAHKILTGRRERMHTLRQLDGISGFPQRTESAYDAFGTAHSST 123

Query: 192 SISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVS 251
           SISA LGMA+    +G K + VAVIGDGAM+AG A+EA+NNAG  D +++VILNDN  +S
Sbjct: 124 SISAALGMAMVAKRQGEKRHAVAVIGDGAMSAGMAFEALNNAGVADCNLLVILNDN-DMS 182

Query: 252 LPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH---ELAAKVDEY 308
           +         PPVGAL+  L++L S     +    AK V K + GPM    E A ++++ 
Sbjct: 183 IS--------PPVGALNRYLAQLMSG----QFYAAAKNVGKTVLGPMPPLLEFAKRLEQQ 230

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
           A+GM+    +TLFE+ G  YIGP+DGH++D L+  LE +K+   TGP  +HVVT+KG+GY
Sbjct: 231 AKGMV--VPATLFEKFGFNYIGPIDGHDLDSLIPTLENIKS--LTGPQFLHVVTKKGQGY 286

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE     YHG  +FDPA G    S+A   S+T  F + L   A  D  +V I  AM  
Sbjct: 287 KLAETDPVAYHGPGQFDPAVGLVKGSAAPRLSFTQVFGQWLCDMAAQDARLVGITPAMRE 346

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+G+  F +RFP R +DVGIAEQHAVTFAAG+ACEG KP  AIYS+F+QR YDQ++HDV 
Sbjct: 347 GSGMVEFEKRFPERYYDVGIAEQHAVTFAAGMACEGAKPVLAIYSTFLQRGYDQLIHDVA 406

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           LQ LPV FA+DRAGLVGADG TH G++D+ F+ C+PNM +  P+DE E   ++++A    
Sbjct: 407 LQNLPVVFALDRAGLVGADGATHAGAYDIAFLRCIPNMSLACPADERECRQLLSSAFE-Q 465

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE--------GERVALLGYGTAVQS 600
           + P   RYPRG+G GV    G   +P   GKG I  E          R+A+L +G+    
Sbjct: 466 NHPVAVRYPRGSGAGVVPLDGLDSLPF--GKGEIRRERKATPPAKAPRIAILAFGS---- 519

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQF 659
            L   AL  +  L  +V + R+ KPLD AL+R++A+ H+ L+T+EEG + GG GS V + 
Sbjct: 520 -LLYPALEAAEALDASVLNMRWVKPLDEALLRTVAERHDALVTLEEGCVMGGAGSAVTEA 578

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 696
           L   G++   ++   L LPD++I HG PA  LA  GL
Sbjct: 579 LNAAGIVRPVLQ---LGLPDQFIGHGDPARLLALQGL 612


>gi|407692804|ref|YP_006817593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus suis
           H91-0380]
 gi|407388861|gb|AFU19354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus suis
           H91-0380]
          Length = 617

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 308/641 (48%), Positives = 414/641 (64%), Gaps = 33/641 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLAKEQLQPVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AG+G+AV  + +      V VIGDGA+TAG A+EAMN+AG + +DM+VILNDN ++S+  
Sbjct: 126 AGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGAMHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIS 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 PE-STLFEELGFNYIGPVDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAEND 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP  G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 293 PIGYHGVPKFDPTCG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 412 IFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +    
Sbjct: 471 RYPRGNAQGVALEPMQA---LEVGKGKLIQQGQKVAILNFGP-----LLNEARIVAEKHN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD  L+  LA SH++L+T+EE +I GG GS V ++L + G      K R
Sbjct: 523 YTLVDMRFVKPLDEQLVAELADSHDLLVTLEENAIQGGAGSFVNEYLQKIG------KIR 576

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           PLV+   PD ++   + A+  A  GL  + I   +  ++ Q
Sbjct: 577 PLVMLGIPDFFVPQATQAESYADLGLDAAGIEQKIQAVVNQ 617


>gi|254248387|ref|ZP_04941707.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
 gi|124874888|gb|EAY64878.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
          Length = 639

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 310/628 (49%), Positives = 409/628 (65%), Gaps = 33/628 (5%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L  I  P  ++ L+  +L  LA +LR  V+  V+ TGGHL S+LG +EL +ALHYVF+ P
Sbjct: 4   LSAIYTPTDLRKLARTQLPDLATQLRDFVLHGVAATGGHLASNLGSVELAIALHYVFDTP 63

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +DRI+WDVGHQ+YPHKILTGRR+ M T+RQ  G+SGF +RSES YD FGT HSSTSISA 
Sbjct: 64  RDRIVWDVGHQSYPHKILTGRREAMKTLRQGGGISGFPRRSESPYDAFGTAHSSTSISAV 123

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNN-AGYLDSDMIVILNDNKQVSLPTA 255
           LGMA    + G   + VAVIGDGA++AG A+EAMNN AG  D  ++V+LNDN     PT 
Sbjct: 124 LGMAHAARINGEARHCVAVIGDGALSAGIAFEAMNNLAGCNDLRLLVVLNDNDMSISPT- 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VGAL    ++L +NR L   +  AK V + +  P+   A ++    +G++  
Sbjct: 183 --------VGALRDCFAKLTANRFLNRRKADAKSVLQAMPAPLAGAAHRLKAQVKGVLLP 234

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
           +  TLFEE G  Y+GP+DGH++D L+  LE ++  K  GP L+HV+T KGRGY  AEK  
Sbjct: 235 A--TLFEEFGFNYVGPIDGHDLDALIPALETMRTLK--GPQLLHVITRKGRGYALAEKDP 290

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHG  KFDP  G    S     +YT  F   L  EAE D+ VVAI  AM  G+GL  F
Sbjct: 291 VLYHGPGKFDPDVGIVPPSPPGKPTYTQVFGNWLCDEAERDRRVVAITPAMREGSGLVDF 350

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            RRFP R FDVGIAEQHA+TFA GLA +GLKP  AIYS+F+QR YDQ++HD+ +Q+LPV 
Sbjct: 351 ERRFPDRYFDVGIAEQHAITFAGGLAADGLKPVVAIYSTFLQRGYDQLIHDIAIQRLPVT 410

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID-DRPSCF 554
           FA+DRAG+VGADG TH G+FD+ F+ C+P++V+MAP+DE E   M+ T  A+D D P+  
Sbjct: 411 FAIDRAGIVGADGATHMGAFDIAFLRCIPDLVLMAPADENECRQMLHT--ALDHDGPAAV 468

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLE 609
           RYPRG G GV  PP  +  P+ +GKG ++       G R+A+L +G+ V + L A   L+
Sbjct: 469 RYPRGCGRGV--PPVREMQPIPIGKGAVIRTSSQPPGARIAILAFGSMVDATLKAGKQLD 526

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +     TVA+ RF +PLD  L+R+LA  H+VL+TVEEG + GG GS  ++ LA   +   
Sbjct: 527 A-----TVANMRFIRPLDIDLVRTLADQHDVLVTVEEGCVAGGAGSACLEVLAAHRV--- 578

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGL 696
            +    L LPD++I+HG PA  LA  GL
Sbjct: 579 PIPVLQLGLPDQFIEHGDPAMLLAACGL 606


>gi|402304803|ref|ZP_10823867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sputorum HK
           2154]
 gi|400377210|gb|EJP30090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sputorum HK
           2154]
          Length = 619

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/635 (48%), Positives = 415/635 (65%), Gaps = 32/635 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I+ P  ++ L   +L+ LADELRA ++  VS++ GHL S LGV+ELT+ALHYV+ 
Sbjct: 6   PLLSQIDSPEALRLLDKDQLQPLADELRAYLLKCVSQSSGHLASGLGVVELTIALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD++ T+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV    +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAQKENAGRQTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+++ S      +R+ +K V  ++  P+     K +E+ +G+IS
Sbjct: 185 N--------VGALNNHLAQIFSGSLYTTVRDGSKKVLDKVPSPIKNFMKKTEEHMKGVIS 236

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+++LV  L+ ++  K  GP  +HV T+KG+GY  AE  
Sbjct: 237 PV-STLFEELGFNYIGPVDGHNIEELVKTLKNMRELK--GPQFLHVRTKKGKGYQPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDPA+G Q   +    +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 294 PIGYHGVPKFDPASG-QLPKAKSIPTYSDIFGQWLCETAEQDTKLIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFAAGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPAQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++F+ C+PNM +M PSDE E+  M+ TA  + + P+  
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSFIRCIPNMTIMTPSDENEMRQMLYTAYQM-NTPTAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LE+GKG+++ +GE+VA+L +GT +     A  + E+    
Sbjct: 472 RYPRGNAKGVALEPMQS---LEIGKGKLIRQGEKVAILNFGTFLTE---AQKVAEAG--N 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD ALI+ LA SH++L+T+EE +I GG GS V ++L + G      K +
Sbjct: 524 YTLVDMRFVKPLDEALIQELANSHDLLVTLEENAIQGGAGSAVNEYLQKIG------KIK 577

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATV 705
           PLV+   PD +I   +  +     GL  + I   +
Sbjct: 578 PLVMLGIPDEFIPQSTQQEAYEALGLDSAGIKQKI 612


>gi|300867681|ref|ZP_07112326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
 gi|300334264|emb|CBN57498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
          Length = 635

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/637 (47%), Positives = 419/637 (65%), Gaps = 25/637 (3%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L  + +P  +  LSI +L+Q+A ++R   +  V+ +GGHLG  LGV+ELT+AL+   +  
Sbjct: 3   LSELTHPNQLHGLSINQLQQIARQIREKHLETVATSGGHLGPGLGVVELTIALYQTLDLD 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +D++LWDVGHQ YPHK+LTGR D+ HT+RQ DG++G+ KR ES++D FG GH+STSISAG
Sbjct: 63  RDKVLWDVGHQAYPHKLLTGRYDRFHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAG 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTA 255
           LGMA+ RD+KG    VVAVIGDGA+T G A EA+N+AG+L  ++++V+LNDN ++S+   
Sbjct: 123 LGMALARDMKGENFKVVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDN-EMSIS-- 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM--- 312
                 P VGA+   L++++ + P++ L++  +   K I         +++    GM   
Sbjct: 180 ------PNVGAIPRYLNKMRLSAPVQFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRL 233

Query: 313 -ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +   G+ + EELG  Y+GPVDGHN+++L+A  ++    +  GPVL+HVVT KG+GY  A
Sbjct: 234 AVPKVGAVI-EELGFTYMGPVDGHNLEELIATFKQAHTIQ--GPVLVHVVTVKGKGYAIA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSS-ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           EK    YH    F+ ATGK   S+  +  +Y+  FA ALI  AE +  +VAI AAM  GT
Sbjct: 291 EKDQVGYHAQNPFNLATGKAIPSNRPKPPAYSKVFAHALIKLAEDNPKIVAITAAMATGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+ F  + P +  DVGIAEQHAVT AAGLACEG++P  AIYS+F+QRAYDQ+VHDV +Q
Sbjct: 351 GLDKFQEKLPKQYIDVGIAEQHAVTCAAGLACEGIRPVVAIYSTFLQRAYDQIVHDVCIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           KLPV F +DRAG+VGADGPTH G +D++++ CLPNMV+MAP DEAEL  M+ T       
Sbjct: 411 KLPVFFCLDRAGIVGADGPTHQGMYDISYLRCLPNMVLMAPKDEAELQRMIVTGINHTSG 470

Query: 551 PSCFRYPRGNGIGVEL-PPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           P   RYPRGNG GV L   G + +P  +GKG IL +G+ V +LGYG+ VQ  + A+ +L 
Sbjct: 471 PIAMRYPRGNGYGVPLMEEGWEELP--IGKGEILRQGDDVLMLGYGSMVQPAMQAAEILS 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
            +G+  TV +ARF KPLD  LI  LA     +IT+EEG + GGFGS V + L    +   
Sbjct: 529 EHGIEATVVNARFAKPLDEELILPLAHKIGRVITLEEGCVMGGFGSAVAESLLDRDIAAK 588

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            ++   + +PD  +DH +P     + GL P+ IA  V
Sbjct: 589 VIR---IGVPDVLVDHATPEQSFTELGLNPAQIAERV 622


>gi|333979345|ref|YP_004517290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           kuznetsovii DSM 6115]
 gi|333822826|gb|AEG15489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 639

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 314/648 (48%), Positives = 417/648 (64%), Gaps = 24/648 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TIN P  +++L +  L+QLA E+R ++I  V+K GGHL  +LGV+ELT+ALH VF  
Sbjct: 4   LLSTINSPADLRSLDMTALQQLASEIRQEIIETVAKNGGHLAPNLGVVELTLALHRVFQT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ+Y HK++TGRR   HT+RQ  G+SGF +  ESE+D FGTGHSSTSISA
Sbjct: 64  PRDKIVWDVGHQSYVHKLVTGRRPVFHTLRQFGGISGFPRPQESEHDAFGTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+A+ RDLKG   +VVAVIGDGAMT G A+EA+N+AG+  + +IV+LNDN+    P  
Sbjct: 124 ALGLALARDLKGDNYSVVAVIGDGAMTGGMAFEALNHAGHHKTSLIVVLNDNEMSIAPN- 182

Query: 256 TLDGPIPPVGALSSALSRLQSN----RPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
                   VG L+  LSRL+++    +   EL ++ K +   IG  + +   +V +  + 
Sbjct: 183 --------VGGLAKYLSRLRTDPMYSKGKEELEQLLKRIPA-IGPRVVKAVERVKDSLKY 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           ++       FEELG  Y+GP+DGHN+  ++ + ++ K T+  GPVL+HV+T KGRGYP A
Sbjct: 234 LVVPG--MFFEELGFIYLGPIDGHNIQAMINVFQQAKTTR--GPVLVHVLTRKGRGYPPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E+ ADK+HGV  F+  TG+  K   +  SYT  F   L+     DK +VAI AAM  GTG
Sbjct: 290 EENADKFHGVGPFEVKTGQVIKKPGQPPSYTEVFGRTLVELGRRDKRIVAITAAMPSGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L+ F   FP R +DVGIAEQHAVT  AGLA  GL+P  AIYS+F+QRAYDQV+HDV LQ 
Sbjct: 350 LDHFAAAFPERFYDVGIAEQHAVTLGAGLAAGGLRPVVAIYSTFLQRAYDQVLHDVCLQN 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DRAGLVG DG TH G FD  ++  +PN+V+MAP DE EL  M+ TA      P
Sbjct: 410 LPVTFALDRAGLVGEDGATHHGVFDFAYLRSIPNLVLMAPGDENELRRMLKTALEYPG-P 468

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
           +  RYPR  G G   P   + +PL VGK R+L EG+ V LL  GT V     A++LLE  
Sbjct: 469 AVLRYPRSAGTGC--PLDEEILPLPVGKARVLREGDDVTLLAAGTMVSLAGEAASLLEQQ 526

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+  TV +ARF KPLD   I   A     ++T+EE  + GGFGS V++ L   GL +  V
Sbjct: 527 GIHATVINARFVKPLDEECITRYALRTRRVVTIEEHVLQGGFGSAVLELLGDRGLRN--V 584

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 718
           +   L +PD +I+HGS A  LA+ GLT   +  TV   LG  R   ++
Sbjct: 585 QVIRLGIPDEFIEHGSRAVLLARCGLTVEVLVNTVLKALGAHRAKTKV 632


>gi|418064382|ref|ZP_12701881.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
 gi|373547554|gb|EHP74276.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
          Length = 496

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/499 (59%), Positives = 366/499 (73%), Gaps = 22/499 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +L+ +  P  ++ L   EL+++AD +RA++I  VS TGGHLGS LGV+ELTVALH+VF
Sbjct: 9   TTILEGLETPDRLRLLPESELQRVADAVRAEMIDAVSITGGHLGSGLGVVELTVALHHVF 68

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ YPHKILTGRRD++ T+RQ  GLSGFTKRSESEYD FG  HSSTSI
Sbjct: 69  DTPDDRIVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSI 128

Query: 194 SAGLGMAVGRDL-------KG----RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           SA LGMAV RDL       KG    ++ N++AVIGDG+M+AG AYEAMNNAG L S +IV
Sbjct: 129 SAALGMAVARDLEEADAKAKGGPAPKRRNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIV 188

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN  +S+         PPVGA+S+ L+RL S    R LRE AK + K +   +++ A
Sbjct: 189 ILNDN-DMSIA--------PPVGAMSAYLARLASGGTYRSLRETAKQLGKLLPKALYQRA 239

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
           A  +EYAR +I G G T+FEE+G +Y+GPVDGHN+D L+ +L+ V+++   GP+L+HVVT
Sbjct: 240 AAAEEYARSLIVGGG-TMFEEMGFHYVGPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVT 297

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAI 422
           +KG+GY  AE +AD+YHGV KFD  +G Q K+ A   +YT  F E+LI  A+ D  VVAI
Sbjct: 298 QKGKGYAPAEASADRYHGVVKFDVVSGVQAKAKANAPAYTRVFGESLIKAADADPKVVAI 357

Query: 423 HAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQ 482
            AAM GGTG++LF +  P R FDVGIAEQHAVTFA GLA EG KPF AIYS+F+QRAYDQ
Sbjct: 358 TAAMPGGTGIDLFGKAHPDRTFDVGIAEQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQ 417

Query: 483 VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVA 542
           VVHDV LQ L VRF +DRAGLVGADG TH G+FD+ ++ CLPNM VMA +DEAEL HMVA
Sbjct: 418 VVHDVALQNLAVRFCLDRAGLVGADGATHAGAFDLAYLCCLPNMTVMAAADEAELVHMVA 477

Query: 543 TAAAIDDRPSCFRYPRGNG 561
           T    D  P   RYPRG G
Sbjct: 478 TCHVHDSGPIALRYPRGEG 496


>gi|323702780|ref|ZP_08114440.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532297|gb|EGB22176.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 639

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 317/637 (49%), Positives = 410/637 (64%), Gaps = 27/637 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L TI  P  ++NL  +EL+ LA E+R  +I  VS TGGHL  +LGV+ELT+A+H VFN+
Sbjct: 4   ILKTIYSPQDLQNLDYKELQCLAREIRETLINTVSVTGGHLAPNLGVVELTIAIHRVFNS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
             DRI+WDVGHQ+Y HK+LTGR+ +  T+RQ  GLSGF KR ES +D F TGHSSTSISA
Sbjct: 64  AVDRIIWDVGHQSYVHKLLTGRQAQFSTLRQYGGLSGFPKRDESIHDAFDTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGM + RDLKG K +VVAVIGDG+MT G A+EA+N+AG+L  ++IVILNDN+    P  
Sbjct: 124 ALGMVLARDLKGEKYSVVAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAPN- 182

Query: 256 TLDGPIPPVGALSSALSRLQSN-RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM-- 312
                   VGALSS LS L+++ +  R   E+A+ + K   GP  +L   VD     +  
Sbjct: 183 --------VGALSSYLSSLRTDPKYSRSKDEIAELLQKIPHGP--KLLKVVDRLKDSLKY 232

Query: 313 --ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
             + G    LFEELG  Y+GPVDGH++  +  +L++ KN    GPVL+HV+T+KG+GY  
Sbjct: 233 LVVPG---MLFEELGFTYLGPVDGHDIKAVTTMLKQAKNL--GGPVLVHVLTKKGKGYEP 287

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AEK  D +HGV  FD  TG   K      SYT  F + +I  A+ D  ++ I AAM  GT
Sbjct: 288 AEKNPDLFHGVGPFDVVTGAIKKIPGAPPSYTQIFGQTMINLAKQDDKIIGITAAMPSGT 347

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GLN F + FP R FDVGIAEQHAVT AAGLA  G +P  AIYS+F+QRAYDQV+HDV LQ
Sbjct: 348 GLNKFAQEFPNRYFDVGIAEQHAVTMAAGLAAGGYRPVVAIYSTFLQRAYDQVLHDVCLQ 407

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVG DGPTH G FD+ ++  +PNMV+MAP DE EL HM+ T A   + 
Sbjct: 408 NLPVTFALDRAGLVGDDGPTHHGVFDLAYLRSIPNMVIMAPKDENELQHMLKT-AVYHNA 466

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG G GV +    + IP  +G+  +L +GE V LL  G  V   L A+  L +
Sbjct: 467 PTAVRYPRGAGEGVAIDSQLQTIP--IGQAEVLWDGEDVVLLAIGNMVPEALKAAENLRA 524

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
            G+   V +AR+ KPLD  LI   A     L+TVEE  + GGFGS V++ L + GL +  
Sbjct: 525 QGISAAVINARYVKPLDEELILHYAARTGHLVTVEEHVLMGGFGSAVLELLERAGLSE-- 582

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           VK + + +PD +++HG      A  GLT   IA TV 
Sbjct: 583 VKVKRIGIPDCFVEHGKQKILRANYGLTAEGIAETVL 619


>gi|452746755|ref|ZP_21946565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri NF13]
 gi|452009232|gb|EME01455.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri NF13]
          Length = 632

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 301/636 (47%), Positives = 417/636 (65%), Gaps = 26/636 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TP+LD    P  ++ L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+ALH
Sbjct: 12  RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGQTGGHFGAGLGVIELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV++ P DR++WDVGHQ YPHKILTGRR +M T+RQ +GL+ F +RSES+YD FG GHSS
Sbjct: 72  YVYDTPDDRLVWDVGHQAYPHKILTGRRQRMATLRQKEGLAAFPRRSESQYDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMAV   LKG +   +AVIGDGA+TAG A+EA+N+A  + ++M+V+LNDN  +
Sbjct: 132 TSISAALGMAVAARLKGEQRKSIAVIGDGALTAGMAFEALNHAPEVGANMLVVLNDN-DM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS+ L+++ S+R    +RE +K +  ++ G   E+A + +EYA+
Sbjct: 191 SISRN--------VGGLSNYLAKILSSRTYSSMREGSKKILSRLPGAW-EIARRTEEYAK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+     TLFEELG  YIGP+DGH++  L+A L  +++    GP  +HVVT+KG+G+  
Sbjct: 242 GML--VPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLD--GPQFLHVVTKKGKGFAP 297

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     +H ++K +P              Y+  F + L   A  D  +  I  AM  G+
Sbjct: 298 AEADPITWHAISKLEPVGAPAKPKKPSGPKYSNVFGQWLCDMAAADPRLTGITPAMKEGS 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
            L  F  R+P R FDV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 358 DLVAFSERYPERYFDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAVQ 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            L V FA+DRAGLVG DGPTH GSFD++++ C+P M+VM PSDE E+  M+ T    +  
Sbjct: 418 NLDVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G    + PG +  PLE+GK  +  +G +VALL +G  +   L     L++
Sbjct: 477 PAAVRYPRGSGPNATIEPGLE--PLEIGKAVVRRQGSKVALLVFGVQLPEALQVGEALDA 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
                TV D RF KPLD AL+R LA +HE+L+T+EE SI  G GS V +FL  + +L   
Sbjct: 535 -----TVVDMRFVKPLDEALLRELAGNHELLVTIEENSIMAGAGSAVAEFLTGESILKPM 589

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +    L LPD Y++H  P++ LA+ GL  + I A V
Sbjct: 590 LH---LGLPDYYVEHAKPSEMLAECGLDAAGIEAAV 622


>gi|451982551|ref|ZP_21930860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrospina gracilis 3/211]
 gi|451760197|emb|CCQ92153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrospina gracilis 3/211]
          Length = 662

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 299/646 (46%), Positives = 421/646 (65%), Gaps = 24/646 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           +  L  IN P  +K+LS   L  LA E+R  ++  +SKTGGHLGS++GV+ELT+ALHYV+
Sbjct: 2   SKFLQKINSPQDLKSLSRENLPDLAAEIRDALLNTISKTGGHLGSNMGVVELTIALHYVY 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
            +PKD  +WDVGHQTY HK+LTGRRD+ HT+RQ +GLSGFTKR E+E+D +  GH  TSI
Sbjct: 62  ESPKDMFIWDVGHQTYVHKLLTGRRDRFHTLRQYEGLSGFTKREENEHDHWNCGHGGTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA L  A  RDLK   +NV+A+IGDG+MTAG A+E +N+ G+L +DM+V+LNDN ++S+ 
Sbjct: 122 SAALAFAKARDLKKEDHNVLAIIGDGSMTAGMAFEGLNHTGHLQTDMVVVLNDN-EMSIS 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLREL-REVAKGV--TKQIGGPMHELAAKVDEYAR 310
                     VG +S+ LS++ + + + ++ RE+ + +     IG  +   A K+DE  +
Sbjct: 181 NN--------VGGMSAHLSQIMTGQVMTKIKREIDQLLLAIPGIGKDISRYAHKIDEAIK 232

Query: 311 GM-ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYP 369
           G+ I G    LFE+LG  YIGP+DGHN D L+   E +K  K  GP L+HV+T KG+GY 
Sbjct: 233 GVFIPGR---LFEDLGFRYIGPIDGHNTDALIETFEAIKGLK--GPTLVHVITRKGKGYK 287

Query: 370 YAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
            AE+ AD +HG + FD  TG  F   A   +YT+ FA+ALI  A+ D+ ++ I AAM  G
Sbjct: 288 VAEEKADVWHGASPFDIETG-VFHKKASNPNYTSVFAQALIDLAKEDETIIGITAAMPDG 346

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
            G++ F + FP R FDVG+AEQHAV FA  +A +GL+P  AIYS+F+QRAYDQVVHDV L
Sbjct: 347 AGISKFGKEFPERTFDVGMAEQHAVDFAGAMALKGLRPVAAIYSTFLQRAYDQVVHDVCL 406

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
             +PV FAMDRAG+VG DG TH G +D+ ++  LPNMV+MAP DE E+ HM+ T A   +
Sbjct: 407 MNIPVVFAMDRAGIVGEDGATHQGLYDIAYLRTLPNMVIMAPKDENEMRHMLKT-AIYHN 465

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G+GV+L P  +   +E+GKG +L EG  +AL+ YG  V+     +  LE
Sbjct: 466 GPAALRYPRGAGLGVDLDPEIQ--EMEIGKGEVLKEGTDIALVAYGHMVRPAENVAKKLE 523

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDG 668
             G+ + V +ARF KPLD  L+   A++ + ++T+EE S  GGFGS V++ L ++   D 
Sbjct: 524 EQGISVAVINARFVKPLDEELVLRYARATQCMVTLEEHSEQGGFGSAVLEALHKEP-SDQ 582

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
             + + + + D  ++HG+PA       +    +  T+    GQ  E
Sbjct: 583 AFQVKCIGVADIVVEHGAPALVRRDLKIDEEGLLETISQFYGQVME 628


>gi|192359149|ref|YP_001983790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio japonicus
           Ueda107]
 gi|229813265|sp|B3PF22.1|DXS_CELJU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|190685314|gb|ACE82992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio japonicus
           Ueda107]
          Length = 636

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 299/642 (46%), Positives = 411/642 (64%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  + RP TPLLD+I+ P  ++ LS ++L QLADELRA +++ V +TGGH G+ LGV+EL
Sbjct: 4   EIPTNRPATPLLDSIDSPAELRALSEKQLPQLADELRAFLLYTVGQTGGHFGAGLGVVEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYV++ P+DR++WDVGHQTYPHKILT RR++MH++RQ  GLSGF KR ES YD FG
Sbjct: 64  TIALHYVYDTPEDRLVWDVGHQTYPHKILTSRRERMHSIRQGGGLSGFPKREESPYDTFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA  GMA+G  + G +  V A+IGDGAMTAG A+EA+N+A + ++DM+V+LN
Sbjct: 124 VGHSSTSISAAQGMAIGAKMAGTERKVAAIIGDGAMTAGMAFEALNHAAHTETDMLVVLN 183

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN     P          VG LS+ LS++ +++    LRE +K V  +I  P  E A + 
Sbjct: 184 DNNMSISPN---------VGGLSTYLSKIWASKFYNSLREGSKQVLGKI-PPAWEFARRT 233

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+ +G +  S  TLFEE+G  Y+GP++GH++ DLV  L  ++  K  GP L+HV+T+KG
Sbjct: 234 EEHFKGFM--SPGTLFEEMGFNYVGPINGHDLGDLVRCLRNLREIK--GPKLLHVITQKG 289

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSA-RTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P         A +   +   F + L   A  D  ++ I  
Sbjct: 290 KGFEPAELDPVGYHALNKIEPKKAAIGAVDAPKKVKFQDVFGQWLCDMAARDDKLIGITP 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+G+  F ++FP R +DV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ++
Sbjct: 350 AMCEGSGMVGFAQQFPERFYDVAIAEQHAVTLAAGMACEGQKPVVAIYSTFLQRAYDQLI 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ L V FA+DRAGLVG DGPTH GSFD++++ C+P M++  PSDE E   ++ TA
Sbjct: 410 HDVALQNLDVTFAIDRAGLVGEDGPTHSGSFDISYLRCIPQMLLATPSDENECRQLLYTA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
                 P+  RYPRG G G  +      +P  +GKG +  EG++VALL +GT     L  
Sbjct: 470 YQYPG-PAAVRYPRGTGAGAVIEQAMTALP--IGKGVVRREGKQVALLCFGT-----LLP 521

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +A   +  L  ++ D RF KPLD  LI  +A SH +L+T+EE ++ GG GS V ++L   
Sbjct: 522 TAAQVAEKLGASLCDMRFVKPLDSELIARMAASHSLLVTLEENALAGGAGSAVSEYLNSQ 581

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           G+    +    L   D +IDH S   QLAQ GL    I   +
Sbjct: 582 GI---AIPLLQLGFADEFIDHNSQKQQLAQQGLDAKGIETAI 620


>gi|384085057|ref|ZP_09996232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           thiooxidans ATCC 19377]
          Length = 624

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 311/637 (48%), Positives = 412/637 (64%), Gaps = 25/637 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LL  I  P  ++ +S  ELK +A  LR  ++  VS+TGGHL S LG +EL VALH VF
Sbjct: 2   TDLLKGIPMPEELRRMSRTELKGVAKTLRQFLLETVSQTGGHLSSCLGTVELAVALHTVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P DR++WDVGHQ YPHKILTGR  +   +R  DGLSGF KR ES YD FG GHSSTSI
Sbjct: 62  NTPDDRLVWDVGHQAYPHKILTGRGPRFGQLRMKDGLSGFLKRDESPYDSFGAGHSSTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SAGLGMAV   LK     VVA+IGDGAMTAG AYEA+NN G LD++++V+LNDN ++S+ 
Sbjct: 122 SAGLGMAVAAKLKKNDREVVAIIGDGAMTAGMAYEALNNGGVLDANLLVVLNDN-EMSIS 180

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI 313
                   P VGA+S  L+R+ S R    +R+ A G    +  P+ ELA K +E  +G++
Sbjct: 181 --------PNVGAVSQYLTRILSGRLYNTVRDGA-GQALSLVPPLRELAKKAEEGVKGLV 231

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
             +  TLFEE+G  Y GP+DGH++D L+  LE +K  K  GP L+HV+T+KG+GY  AE+
Sbjct: 232 --TPGTLFEEMGFNYFGPIDGHDLDALIPTLENLKKIK--GPRLLHVMTKKGKGYGPAEE 287

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV  F+ + G+  K +    SYT  F + L  +   +  +VAI  AM  G+GL 
Sbjct: 288 DPCGYHGVTPFNQSDGQMAKKAGGPPSYTKVFGDWLCDKGAAESSLVAITPAMREGSGLV 347

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + +P R +DVGIAEQHAVTFAAG+AC+G+ P  AIYS+F+QRAYDQ++HDV +Q LP
Sbjct: 348 RFEQLYPERYYDVGIAEQHAVTFAAGMACDGIHPVVAIYSTFLQRAYDQLLHDVAIQNLP 407

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVGADG TH G+FD+ +  C+PN+VVMAP DE EL  M+ T  A    P+ 
Sbjct: 408 VLFAIDRAGLVGADGATHQGAFDMAYARCIPNLVVMAPKDEQELRDMLNTGFAYPG-PAL 466

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G+G+EL   N    + +GK  ++  G ++A+L +GT   + L A   L++   
Sbjct: 467 VRYPRGTGVGLELDK-NLERTVALGKAEVIRSGNKLAILAFGTRAAAALQAGEALDA--- 522

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KPLD  L++ L ++H+ L+TVEEG I GG GS V ++L   G +   V  
Sbjct: 523 --TVINMRFVKPLDQELLQELTQTHQALLTVEEGVIAGGAGSAVAEYLLNQGQI---VPM 577

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           R L LPD++I+ G     LA+ GL  S I A    +L
Sbjct: 578 RILGLPDQFIEQGDANQWLAELGLDASGITAAGRTLL 614


>gi|381160392|ref|ZP_09869624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodovibrio sp. 970]
 gi|380878456|gb|EIC20548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodovibrio sp. 970]
          Length = 642

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 326/634 (51%), Positives = 421/634 (66%), Gaps = 27/634 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ I  P  ++++S  +LK+LA ELRA +I +VS+TGGHL + LGV+ELTVA+H+VF+
Sbjct: 15  PLLEQIQDPADLRSMSSEQLKELAAELRAFLIDSVSRTGGHLAAGLGVVELTVAIHHVFD 74

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD+MH MR   GLSGF KRSES YD FG GHSSTSIS
Sbjct: 75  TPHDRLVWDVGHQAYPHKILTGRRDRMHRMRMKGGLSGFPKRSESRYDTFGVGHSSTSIS 134

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGM++   +KG +  V+AVIGDG++ AG A+EA+N+ G LD D++VILNDN ++S+  
Sbjct: 135 AALGMSIAARVKGEQRQVIAVIGDGSLGAGMAFEALNHGGPLDPDLLVILNDN-EMSIS- 192

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGA+S  LSRL S+R    +RE +K   + +    H L  + +E+ +GM+ 
Sbjct: 193 -------PPVGAISRHLSRLLSSRVYTSVREGSKTALRSMPHLRH-LVGRWEEHMKGMV- 243

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              ST+FEE+G  YIGP+DGH++DDLVA L  +K     GP  +HV T+KGRGY  AE  
Sbjct: 244 -MPSTMFEEMGFNYIGPIDGHDMDDLVATLNNMK--AMPGPRFLHVSTQKGRGYEPAEGQ 300

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
             ++HGV  FD  TG+  K  A  ++YT  F + L   AE +  ++AI  AM  G+G+  
Sbjct: 301 PVQFHGVTPFDSKTGRMHK-KAGGKTYTQIFGDWLCEAAEKEPRLLAITPAMREGSGMVA 359

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP R FDVGIAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ+VHDV LQ+L V
Sbjct: 360 FSERFPERYFDVGIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLVHDVCLQRLDV 419

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH GSFD+++   LPN+V+MAP+DE E   M+ TA      P+  
Sbjct: 420 TFAVDRAGLVGADGATHAGSFDLSYGRPLPNLVIMAPADENECRRMLQTALE-HPGPAMV 478

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G GVE+ P      L +G+G IL +GE VALLG+G+ V     A AL     + 
Sbjct: 479 RYPRGCGPGVEIDPSAP--VLAIGEGEILRQGEHVALLGFGSRV-----APALEVGEEIN 531

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVA+ RF KPLD  LI  LA  H++LIT+EE  I GG GS V + L+  GL    V+  
Sbjct: 532 ATVANMRFVKPLDERLILELADQHQLLITIEENVIAGGAGSAVSELLSAHGL---AVRCV 588

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
            L LPD   +  S  +QL   GL    I   V +
Sbjct: 589 HLGLPDVCQEQASHGEQLHVCGLDAPGIRDAVLS 622


>gi|357038610|ref|ZP_09100407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
           DSM 7213]
 gi|355359402|gb|EHG07164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
           DSM 7213]
          Length = 639

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 305/643 (47%), Positives = 424/643 (65%), Gaps = 27/643 (4%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           LD IN P  ++ L+I +L+QLA E+R ++I  V+K GGHL  +LGV+ELT+ALH VF  P
Sbjct: 5   LDQINSPWDVRALTIPQLEQLAGEIREEIITTVAKNGGHLAPNLGVVELTLALHRVFYTP 64

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +D+I+WDVGHQ Y HK++TGRR++ +T+R   GLSGF +  ESE+D F TGHSSTSISA 
Sbjct: 65  RDKIIWDVGHQCYVHKLITGRREQFYTLRCHGGLSGFPRPDESEHDAFATGHSSTSISAA 124

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTAT 256
           LGMA+ RDLKG +  VVAVIGDG+MT G AYEA+N+AG+L  D+IV+LNDNK +S+    
Sbjct: 125 LGMALARDLKGDRYAVVAVIGDGSMTGGMAYEALNHAGHLKKDLIVVLNDNK-MSISAN- 182

Query: 257 LDGPIPPVGALSSALSRLQSN----RPLRELREVAKGVTKQIGGPMHELAAKV-DEYARG 311
                  VGA+S  L+R++++    R   E+ ++ + +   IG  + ++A ++ D +   
Sbjct: 183 -------VGAMSGYLNRMRTDPKYSRGKDEIEQILRRI-PSIGSTVVKVAERLKDSFKYL 234

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           ++ G    +FEE+G  Y+GP+DGHN+  ++   E+ K+    GPVL+HVVTEKG GY  A
Sbjct: 235 VVPG---MIFEEMGFTYLGPIDGHNMLSMLNTFEQAKSLG--GPVLVHVVTEKGCGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
            + ADK+HG+  FD ++G   K S    +YT  F   L+  AE D  VV I AAM  GTG
Sbjct: 290 VEKADKFHGIGPFDISSGNCLKKS-DISTYTEIFGRTLVKLAEQDPAVVGITAAMCSGTG 348

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           LN F ++FP+R FDVGIAEQHAVT AAGLA +G KP  A+YS+F+QRAYDQ++HDV LQK
Sbjct: 349 LNEFAKKFPSRFFDVGIAEQHAVTMAAGLATQGYKPVVAVYSTFLQRAYDQIIHDVCLQK 408

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           LPV FA+DR+G+VG DGPTH G FD++++   P+M +MAP+DE EL HM+ TA  ++  P
Sbjct: 409 LPVVFAVDRSGIVGDDGPTHHGLFDISYLRSAPHMTIMAPADENELQHMLHTALQVNG-P 467

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G+GV L   ++ +P  VG+  +L+EG+ + LL  G  V     A+ +L+  
Sbjct: 468 CAVRYPRGTGLGVALDLHSRALP--VGQAEVLVEGKDITLLAVGNMVPVARRAAVMLKER 525

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G+  TV +ARF KPLD   I   A     LIT+EE ++ GGFGS V+Q LA   +    V
Sbjct: 526 GVLATVINARFIKPLDDECITRWAARTGRLITIEENTLAGGFGSAVLQLLAAKEMPGIQV 585

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           K   + + D +I+HG  +      GLTP +I      ++G  +
Sbjct: 586 KC--VGIEDVFIEHGGQSLLRKNYGLTPENIMNLAMQMIGSRK 626


>gi|315125808|ref|YP_004067811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           SM9913]
 gi|315014322|gb|ADT67660.1| 1-deoxy-D-xylulose 5-phosphate synthase (DXP synthase)
           [Pseudoalteromonas sp. SM9913]
          Length = 620

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 302/624 (48%), Positives = 413/624 (66%), Gaps = 28/624 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLLD +N P H+++L+  +L   + ELR  ++ +VS++ GHL S LG +ELTVALHYV+N
Sbjct: 9   PLLDLVNEPAHLRDLAQDKLPAFSHELRDYLLNSVSQSSGHLASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ YPHKILTGRRD+MHT+RQ DGL  F  R ESEYD F  GHSSTSIS
Sbjct: 69  TPEDRLVWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPFRDESEYDTFSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGM++    +G+    VAVIGDGA+TAG A+EAMN+ G + SDM++ILNDN ++S+  
Sbjct: 129 AALGMSIAAQKEGKGRKTVAVIGDGAITAGMAFEAMNHLGDVKSDMLIILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG-MI 313
                    VGAL++  +R+ S      +RE +K +   +  P+ ELA++++E+ +G MI
Sbjct: 188 N--------VGALTNHFARILSGSFYTNIREGSKKLLSGV-PPVKELASRMEEHIKGMMI 238

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G   T FEELGL YIGP+DGH+V+ LV  L  ++N K  GP L+H+ T+KG+GY  AE 
Sbjct: 239 PG---TFFEELGLNYIGPIDGHDVNMLVDTLRNMRNLK--GPQLLHIKTQKGKGYKPAEA 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV KFDPAT    KS     +++  F + L   A+ D  ++AI  AM  G+G+ 
Sbjct: 294 DPIGYHGVPKFDPATSSLPKSKPGAATFSNVFGDWLCDMAKQDSKLMAITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F + +P + FDV IAEQHAVT AAG ACEGLKP  AIYSSF+QRAYDQ++HDV LQ LP
Sbjct: 354 RFSKEYPEQYFDVAIAEQHAVTLAAGFACEGLKPVVAIYSSFLQRAYDQLIHDVALQNLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAG+VGADG TH G++D++FM C+PNMV+MAPSD  E  HM+ T     + P  
Sbjct: 414 VLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMAPSDTNECRHMLYTGYQA-NCPVA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+    ++    +   LE+GK  ++ +G +VA+L +GT     L  +A L ++ L
Sbjct: 473 VRYPRGSAGSADIQSTMQ--QLEMGKANVIKKGTKVAILSFGT-----LLENAQLATDEL 525

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             T+ + RF KPLD ALI  L   H++++T+E+ +I GG GS V ++LA    +   VK 
Sbjct: 526 NATLVNMRFIKPLDTALIDELINDHDIIVTLEDNAIAGGAGSAVNEYLAS---IKADVKV 582

Query: 673 RPLVLPDRYIDHGSPADQLAQAGL 696
             L +PD +I HG+      + GL
Sbjct: 583 LNLGIPDEFIKHGTQQQMHDEMGL 606


>gi|85859631|ref|YP_461833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Syntrophus aciditrophicus
           SB]
 gi|118595622|sp|Q2LUA7.1|DXS_SYNAS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|85722722|gb|ABC77665.1| 1-deoxy-D-xylulose 5-phosphate synthase [Syntrophus aciditrophicus
           SB]
          Length = 650

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 301/646 (46%), Positives = 418/646 (64%), Gaps = 24/646 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L  I +P  ++ L I +L  LA ++R+ +I  VS+TGGHL SSLG +ELT+A+H VF+ 
Sbjct: 17  ILSRIQFPEDIRMLDIGDLTLLASDIRSAIIETVSRTGGHLASSLGTVELTLAVHKVFDT 76

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKDR++WDVGHQ Y HK++TGRRD   T+RQ  G+SGF KR ES YD F  GHSSTSISA
Sbjct: 77  PKDRVIWDVGHQAYAHKLITGRRDVFSTLRQKGGISGFPKREESPYDVFNVGHSSTSISA 136

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
             G+A  RDLK  +  VVA+IGDG+MTAG A+E +N +G    D+++ILNDN ++S+   
Sbjct: 137 ASGIAEARDLKKERFKVVAIIGDGSMTAGLAFEGLNWSGDRKKDLVIILNDN-EMSIS-- 193

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK---QIGGPMHELAAKVDEYARGM 312
                 P VGALSS L+ + + +   ++R+  +   K    IG  + E + + +E  + +
Sbjct: 194 ------PNVGALSSYLNHIMTGQTANKIRKDIRNFLKTIPSIGEQVLEFSRRAEESLKAL 247

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           I      LFE+LG  Y+GP++GH +D L+  LE+V+N +  GPVL+HV+T KG+GY +AE
Sbjct: 248 IVPGA--LFEDLGFTYVGPLEGHRLDHLIRNLEDVRNME--GPVLVHVITRKGKGYKFAE 303

Query: 373 KAADKYHGVAKFDPATGKQFKSSAR--TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
               ++HG+  F P TGK   +S      SYT  F   ++  A  +  +VAI AAM  GT
Sbjct: 304 AEPLRFHGICPFSPETGKPAAASESPVPPSYTQVFGNTIVKLARQNPRLVAITAAMCEGT 363

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GLN F   FP R FDVGIAEQH+VTFAAGLA EG+ P  AIYSSF+QRAYDQ++HDV LQ
Sbjct: 364 GLNAFAEEFPERFFDVGIAEQHSVTFAAGLATEGILPVVAIYSSFLQRAYDQILHDVCLQ 423

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAG VG DGPTH G FD++++  +PNMVVMAP DE EL HM+ TA A   +
Sbjct: 424 NLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHTAVAC-GK 482

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG+G+GV +   ++   LE+GKG +L EG  +A+L  G  V   L A+  L  
Sbjct: 483 PAAVRYPRGSGVGVTM--DSQPFSLELGKGEVLCEGGSLAILAVGDPVHPALTAAVQLRE 540

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
            G+  TV +ARF KPLD  L+  + +S + ++TVEE  + GGFGS +++FL ++ +    
Sbjct: 541 EGIYATVVNARFVKPLDRELLLRIVRSFKKILTVEENVLTGGFGSAILEFLEENDIHGIQ 600

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           VK   L + D + +  + A+Q    G+    IAA V +++   R +
Sbjct: 601 VKR--LGIRDEFAEQATQAEQRRLYGIDEQGIAAAVRSMMNMGRSS 644


>gi|388256548|ref|ZP_10133729.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio sp. BR]
 gi|387940248|gb|EIK46798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cellvibrio sp. BR]
          Length = 636

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 304/642 (47%), Positives = 410/642 (63%), Gaps = 27/642 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  + RP TPLLD+I+ P  ++ LS ++L QLA+ELRA ++++V +TGGH G+ LGV+EL
Sbjct: 4   EIPTSRPLTPLLDSIDSPTELRALSEKQLPQLAEELRAFLLYSVGQTGGHFGAGLGVVEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHYV+  P DR++WDVGHQTYPHKILT RR++M T+RQ  GLSGF KR ESE+D FG
Sbjct: 64  TIALHYVYQTPNDRLVWDVGHQTYPHKILTSRRERMGTIRQGSGLSGFPKREESEFDTFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA  GMA+G  + G +  V A+IGDGAMTAG A+EA+N+A + ++DM+V+LN
Sbjct: 124 VGHSSTSISAAQGMAIGAKMAGIERKVAAIIGDGAMTAGMAFEALNHAAHTETDMLVVLN 183

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN     P          VG  S+ LS++ +++    LRE +K V   I  P  E A + 
Sbjct: 184 DNNMSISPN---------VGGFSTYLSKIWASKFYNSLREGSKQVLGII-PPAWEFARRT 233

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+ +G +  S  TLFEE+G  Y+GP++GH++ DLV  L  ++  K  GP L+H++T+KG
Sbjct: 234 EEHFKGFM--SPGTLFEEMGFNYVGPINGHDLGDLVRCLSNLREIK--GPKLLHIITQKG 289

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSA-RTQSYTTYFAEALIAEAEVDKDVVAIHA 424
           +G+  AE     YH + K +P   +     A +   Y   F   L   A  D  ++ I  
Sbjct: 290 KGFEPAELDPVGYHALNKIEPKKAELGAVDAPKKVKYQDVFGRWLCDMAAQDDKLIGITP 349

Query: 425 AMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVV 484
           AM  G+G+  F   FP R +DV IAEQHAVT AAG+ACEG KP  AIYS+F+QRAYDQ+V
Sbjct: 350 AMCEGSGMVEFAAHFPERFYDVAIAEQHAVTLAAGMACEGQKPVVAIYSTFLQRAYDQLV 409

Query: 485 HDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATA 544
           HDV LQ L V FA+DRAGLVG DGPTH GSFD++F+ C+PNMV+ APSDE E   ++ TA
Sbjct: 410 HDVALQNLDVTFAIDRAGLVGEDGPTHAGSFDISFLRCIPNMVIAAPSDENECRQLLYTA 469

Query: 545 AAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA 604
                 P+  RYPRG G G  +      +P  +GKG I  EG++VALL +G      L A
Sbjct: 470 YHYQG-PAAVRYPRGTGPGTAIEKTMTALP--IGKGVIKREGKQVALLCFGP-----LLA 521

Query: 605 SALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQD 663
           +A   +     T+ D RF KPLD  L+  LA SH++L+T+EE +I GG GS V + L   
Sbjct: 522 TAQQVAEQHNYTLVDMRFVKPLDAQLVEQLAGSHQLLVTLEENTIAGGAGSAVTEHLNHI 581

Query: 664 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           GL+  T++   L   D +++H S   QLA  GL    IA  +
Sbjct: 582 GLICPTLQ---LGFGDEFVEHASQKQQLASQGLDVKSIAERI 620


>gi|386265886|ref|YP_005829378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           R2846]
 gi|309973122|gb|ADO96323.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2846]
          Length = 625

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/638 (46%), Positives = 415/638 (65%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ  G+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDG++TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENASRKTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+++LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIEELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++ EG+++A+L +GT + S L AS  L +    
Sbjct: 475 RYPRGNAVGVKLTPLEM---LPIGKSRLIREGQKIAILNFGTLLPSALEASEKLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 528 -TVVDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGVGSAVSEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + L   GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALEDLGLDTKGIEEKIINFIAK 621


>gi|336451116|ref|ZP_08621561.1| 1-deoxy-D-xylulose-5-phosphate synthase [Idiomarina sp. A28L]
 gi|336281961|gb|EGN75207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Idiomarina sp. A28L]
          Length = 619

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 306/639 (47%), Positives = 411/639 (64%), Gaps = 27/639 (4%)

Query: 68  HSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTV 127
            ++  P PLL  I+ P  ++ L  ++L Q++DELR  ++ +VSK+ GHL S LG +ELTV
Sbjct: 3   QAKNNPFPLLHLIDSPADLRGLPKQKLNQVSDELRQFLLSSVSKSSGHLASGLGTVELTV 62

Query: 128 ALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTG 187
           ALHYVF  P D I+WDVGHQ YPHKILTGRRD++HT+RQ DGL  F  R ESEYD    G
Sbjct: 63  ALHYVFKTPFDHIVWDVGHQAYPHKILTGRRDRLHTIRQKDGLHPFPWREESEYDVLSVG 122

Query: 188 HSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN 247
           HSSTSISA LG+A+  + +G     VA+IGDGA+TAG A+EAMN+AG +  DM+VILNDN
Sbjct: 123 HSSTSISAALGLAIAAEREGENRKTVAIIGDGALTAGMAFEAMNHAGDVAPDMLVILNDN 182

Query: 248 KQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDE 307
             +S+           VGAL++  +RL S +    LRE +K +   +   M EL ++ +E
Sbjct: 183 -DMSISEN--------VGALNNHFARLLSGKVYTSLREGSKQLLSALPS-MRELVSRAEE 232

Query: 308 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 367
           + +GM+  +  T+FEELG  YIGP+DGH+VD LV  L  ++  K  GP L+HVVT KG+G
Sbjct: 233 HVKGMV--TPGTIFEELGFNYIGPIDGHDVDALVDTLSNMRTLK--GPQLLHVVTRKGKG 288

Query: 368 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 427
           Y  AEK    YHGV KFDP+       +    SY+  F E L   A+ D  ++AI  AM 
Sbjct: 289 YGPAEKDPIGYHGVPKFDPSIDSLPAKAPSIPSYSAVFGEWLCEVAQGDNKLMAITPAMR 348

Query: 428 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 487
            G+G+  F RRFP + FDV IAEQHAVTFA+GLA  G+KP  AIYS+F+QRAYDQ++HDV
Sbjct: 349 EGSGMVEFARRFPKQYFDVAIAEQHAVTFASGLAIAGMKPVVAIYSTFLQRAYDQLIHDV 408

Query: 488 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 547
            LQ L V FA+DRAG+VGADGPTH G+FD++FM C+PN+++M PSDE E   M++T   +
Sbjct: 409 ALQNLDVLFAIDRAGIVGADGPTHQGAFDLSFMRCIPNLIIMTPSDENECRLMLST-GYL 467

Query: 548 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 607
              P+  RYPRGNG GV+  P      L +GK R +  G+++A+L +GT     L   A+
Sbjct: 468 HQGPAAVRYPRGNGTGVDYSPLEA---LTIGKSRTVRSGKKIAILNFGT-----LLGEAV 519

Query: 608 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLL 666
           L +  L  TV D RF KPLD   + + A+ H++L+T+EE ++ GG GS V + LA   + 
Sbjct: 520 LAAEKLDATVIDMRFVKPLDIEAVLAAAEQHDILVTLEENAVSGGAGSAVSEALAAARVN 579

Query: 667 DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              +    L LPD +I HGS  +  A+  L    I A +
Sbjct: 580 QSVLH---LGLPDSFIKHGSQDEIRAELLLDAEGIEAQI 615


>gi|335043486|ref|ZP_08536513.1| deoxyxylulose-5-phosphate synthase [Methylophaga aminisulfidivorans
           MP]
 gi|333790100|gb|EGL55982.1| deoxyxylulose-5-phosphate synthase [Methylophaga aminisulfidivorans
           MP]
          Length = 607

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 306/631 (48%), Positives = 421/631 (66%), Gaps = 34/631 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L  IN P  ++ L  ++L QLA+ELR  +I +V +TGGH+ S+LGVIELT+ALHYVF+ 
Sbjct: 4   ILTHINSPEDLRQLDKKQLPQLAEELRTLIIDSVQQTGGHISSNLGVIELTIALHYVFDT 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P DR++WDVGHQ+Y HKILTGRRD+M+TMRQ  GLSGF KRSESEYD FG GHSSTSISA
Sbjct: 64  PTDRLVWDVGHQSYVHKILTGRRDQMNTMRQPGGLSGFPKRSESEYDTFGVGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA+         + VA+IGDGA+TAGQA+EA+ +AG L ++++VILNDN ++S+   
Sbjct: 124 ALGMALAAQANDDPRHAVAIIGDGALTAGQAFEALAHAGDLSANLLVILNDN-EMSISKN 182

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VG +++ L++L S       RE +K V ++I  P  E+A + +E+ +GM+  
Sbjct: 183 --------VGGMANYLAKLLSGSFYASAREGSKRVLEKI-PPAWEIAKRAEEHVKGMM-- 231

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEE+G  YIGP+DGH++D L+A +  +K  K  GP  +H+VT+KG+GY  AE   
Sbjct: 232 VPGTLFEEMGFNYIGPIDGHDIDTLIATMTNLKKRK--GPQFLHIVTKKGKGYEPAELHP 289

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
            KYHGV+   PA     KSS  T  YT  F   L   A +D D+  I  AM  G+GLN F
Sbjct: 290 CKYHGVS---PANS---KSSGPT--YTQVFGRWLCDMARLDPDLFGITPAMCEGSGLNRF 341

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
              FP R FDVGIAEQH+VT AAGLACEG KP  AIYS+F+QRAYDQ++HDV +Q L V 
Sbjct: 342 AEDFPERYFDVGIAEQHSVTLAAGLACEGKKPVVAIYSTFLQRAYDQLIHDVAIQNLNVL 401

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAGLVGADGPTH GSFD++F+ C+PNM++MAP+DE E   M+ T    +  P+  R
Sbjct: 402 FAIDRAGLVGADGPTHAGSFDLSFLRCIPNMIIMAPADENECRQMLTTGFRYNG-PAAVR 460

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRG+G G  + P      LE+GK ++  +G++VA+L +G+ V +   A+  + +     
Sbjct: 461 YPRGSGNGTPVEPALTS--LEIGKAQLKRQGKKVAILAFGSMVTAAEQAAEQINA----- 513

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           TV + RF KPLD  +I  +A SH+++IT+EE ++ GG GS V ++L +   ++  V  + 
Sbjct: 514 TVVNMRFVKPLDTDIINHIANSHDLIITIEENAVMGGAGSAVNEYLRE---INHPVAIKL 570

Query: 675 LVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + LPD +I+HG  +  L+  GL  + I  T+
Sbjct: 571 MGLPDTFIEHGVHSSMLSDCGLDAAGILHTI 601


>gi|220934011|ref|YP_002512910.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioalkalivibrio
           sulfidophilus HL-EbGr7]
 gi|254782086|sp|B8GN62.1|DXS_THISH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|219995321|gb|ACL71923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioalkalivibrio
           sulfidophilus HL-EbGr7]
          Length = 640

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 312/638 (48%), Positives = 417/638 (65%), Gaps = 26/638 (4%)

Query: 69  SQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVA 128
           SQ    PLL  I  P  ++ L   EL  LA ELRA ++ +VS TGGHL S+LG +ELT+A
Sbjct: 2   SQPESYPLLSRIGSPSDLRELPAAELPALAGELRAFLLESVSSTGGHLASNLGTVELTIA 61

Query: 129 LHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGH 188
           LHYVFN P DR++WDVGHQ+YPHKILTGRR+ M  +R+  GL+GF KR+ES YD FG GH
Sbjct: 62  LHYVFNTPDDRLVWDVGHQSYPHKILTGRREAMPGLRKKGGLAGFPKRAESPYDTFGVGH 121

Query: 189 SSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNK 248
           SSTSISA LGMA+     G   + VA+IGDGAMTAG A+EA+N+AG   ++++V+LNDN+
Sbjct: 122 SSTSISAALGMALAARQLGEDRHAVAIIGDGAMTAGMAFEALNHAGDQKANLLVVLNDNE 181

Query: 249 QVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEY 308
               P          VGA+++ L+RL S +    +RE +K V   +  PM E   + +E+
Sbjct: 182 MSISPN---------VGAMNNYLARLLSGKVYSTVREGSKRVLDHMP-PMREFMRRAEEH 231

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            +GMI     TLFEELG  Y GP+DGH++  LV  L+ ++     GP L+HVVT KG GY
Sbjct: 232 MKGMIVPG--TLFEELGFNYYGPIDGHDLPSLVKTLKNLR--ALPGPRLLHVVTRKGHGY 287

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AE+    YHGV +FDP+ G     +  + SYT  F + L   AE D  +V I  AM  
Sbjct: 288 APAEQDPCGYHGVGQFDPSQGLAAGKTPSSPSYTQVFGQWLCDMAEADPRLVGITPAMRE 347

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           G+GL  F +RFP R  DVGIAEQHA+T AAG+AC+GLKP  AIYS+F+QRAYDQ++HD+ 
Sbjct: 348 GSGLVEFSQRFPERYHDVGIAEQHALTVAAGMACDGLKPVVAIYSTFLQRAYDQLIHDIA 407

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPV  A+DRAG+VG DGPTH GSFD++++ C+PN+ VMAP+DE E   M++T   +D
Sbjct: 408 IQNLPVLLAIDRAGVVGPDGPTHAGSFDLSYLRCVPNLTVMAPADEDECRRMLSTGFHLD 467

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
             P+  RYPRG G G  L PG   +P  VGK ++  +G  VALL +G  + + LAA+  L
Sbjct: 468 G-PAAVRYPRGKGPGAALDPGLDTLP--VGKAQLRRKGRGVALLAFGAVLPAALAAAEPL 524

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
           ++     TV + RF KPLD AL+R +A+ H++L+T+E+  + GG GS V + LA  G+  
Sbjct: 525 DA-----TVVNMRFVKPLDEALVREMAEGHDLLVTLEDNVVAGGAGSAVAESLAVQGI-- 577

Query: 668 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            TV    L LPDR+ +HGS  + L++AGL    I A V
Sbjct: 578 -TVPLLHLGLPDRFQEHGSREELLSEAGLDAEGILAAV 614


>gi|431930186|ref|YP_007243232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioflavicoccus mobilis
           8321]
 gi|431828489|gb|AGA89602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thioflavicoccus mobilis
           8321]
          Length = 639

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 314/623 (50%), Positives = 417/623 (66%), Gaps = 27/623 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I  P  ++ L   +L  LA ELR+ +I  VS+TGGH  + LGV+ELT+ALHYVFN
Sbjct: 17  PLLSAIELPADLRLLPEEDLPILAHELRSFLIDCVSRTGGHFAAGLGVVELTIALHYVFN 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DRI+WDVGHQ YPHKILTGRR +M T+RQ DG+SGF KRSES YD  G GHSSTSIS
Sbjct: 77  TPEDRIVWDVGHQAYPHKILTGRRQRMLTLRQKDGISGFPKRSESPYDTLGVGHSSTSIS 136

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A +GMAV    +     VVAVIGDGA+ AG A+EA+N+AG  D D++VILNDN ++S+  
Sbjct: 137 AAMGMAVAAARQDEHRQVVAVIGDGALGAGLAFEALNHAGAQDVDLMVILNDN-EMSIS- 194

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGA+S+ L+RL S +    +RE +K   + +   + +L  + +E+ +GM+ 
Sbjct: 195 -------PPVGAISNHLARLLSGKIYTSMREGSKSALRSLPH-LRQLVGRWEEHVKGMV- 245

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP++GH+VD L+  L  ++  +  GP L+HV+T+KG+GY  AE  
Sbjct: 246 -MPSTLFEELGFNYIGPLNGHDVDGLIGTLRNMRTMR--GPRLLHVITQKGKGYEPAEGQ 302

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGVA FD  TG+  KS+    +YT+ F + L      D+ ++AI  AM  G+G+  
Sbjct: 303 PVTYHGVAPFDRQTGRPRKSNG-GPTYTSIFGDWLCEAGTRDERLLAITPAMCEGSGMTE 361

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP R FDVGIAEQHAVT AAG+ACEGLKP  AIYSSF+QRAYDQ++HDV LQ L V
Sbjct: 362 FAKRFPERFFDVGIAEQHAVTLAAGMACEGLKPVVAIYSSFLQRAYDQLIHDVCLQDLDV 421

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVG DGPTH GSFD++F   +PN+V+MAP+DE E   ++ TA A    P+  
Sbjct: 422 TFAVDRAGLVGEDGPTHAGSFDLSFARPIPNLVIMAPADENECRRLLETAYA-HPGPAMV 480

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+G GV + P  +  PL +G+  +   G+ VALL +GT V +   A+  L++    
Sbjct: 481 RYPRGSGPGVAVDP--QATPLPLGEAELRRRGQGVALLAFGTMVAAAQEAAESLDA---- 534

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF KPLD AL+  +A +H++++T+EE +I GG GS + + LA  G+    V   
Sbjct: 535 -TVVNMRFIKPLDEALVLEMATTHDLVVTLEENAIAGGAGSAIGELLAAHGV---AVHLL 590

Query: 674 PLVLPDRYIDHGSPADQLAQAGL 696
            L LPDRYIDH +  +Q A  GL
Sbjct: 591 HLGLPDRYIDHATQREQRATCGL 613


>gi|254478700|ref|ZP_05092071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydibrachium
           pacificum DSM 12653]
 gi|214035387|gb|EEB76090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Carboxydibrachium
           pacificum DSM 12653]
          Length = 622

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/645 (46%), Positives = 419/645 (64%), Gaps = 32/645 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+ IN P  +K L I++L +L++E+R  ++  VSKTGGHL S+LG++ELT+ALHYVFN+
Sbjct: 1   MLEQINSPYDLKKLDIKDLPRLSEEIRQFIVEKVSKTGGHLASNLGIVELTLALHYVFNS 60

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+I+WDVGHQ Y HK++TGRRDK  T+RQ +GLSG+TKR+ES +D FG GHSSTS+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMITGRRDKFDTLRQFNGLSGYTKRTESIHDIFGAGHSSTSLSA 120

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+A  RDLKG K +V+AVIGDGA+T G A EA+NN G    D+IVILN N ++S+   
Sbjct: 121 ALGIATARDLKGEKYHVIAVIGDGALTGGMALEALNNIGRSQKDVIVILNHN-EMSISEN 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAK---GVTKQIGGPMHELAAKVDEYARGM 312
                   VG+LS  LS+L+++    ++++       +   IG  +H+   K+ +  + +
Sbjct: 180 --------VGSLSLYLSKLRTDPTYNKVKQEIDNLLNIIPPIGKSLHKYIEKIKDSIKQL 231

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +       FEELG  Y+GP+DGHNV++L+ +LE  K  K  GP+LIHVVT+KG+GY +AE
Sbjct: 232 V--VPGMFFEELGFTYLGPIDGHNVEELIEVLERSKKMK--GPLLIHVVTKKGKGYMFAE 287

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           K  DK+H  A FD  TGK F    +  SY+  F + L   A  D+ +VAI AAM  GTGL
Sbjct: 288 KRPDKFHSAAPFDIETGK-FVGEGK-DSYSDVFGKTLAEMALKDEKIVAITAAMPEGTGL 345

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +  P R FDVGIAEQHA TFAAGLA EG KP+ A+YS+F+QRAYDQV+HDV +QKL
Sbjct: 346 IHFAKLIPDRFFDVGIAEQHATTFAAGLAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKL 405

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAG+VG DG TH G FD++F+  +PN+ +M+P D  EL  MV  +  + D P 
Sbjct: 406 PVVFAVDRAGIVGEDGETHQGVFDISFLRAIPNIAIMSPKDANELVEMVKLSRNL-DFPV 464

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG     ++   ++      GKG +L+EGE++A+   G  V   + A+ +L+ +G
Sbjct: 465 AIRYPRGKAGEYDI---SRKPSFPFGKGEVLLEGEKIAVFALGRMVSKSIDAAEILKGHG 521

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +   V + RF KPLD  LI  ++   ++++TVE+  I GG GS +++      LL+G   
Sbjct: 522 INPFVVNLRFVKPLDEELILEISNKVDLVVTVEDNVIAGGVGSAILE------LLNGKKV 575

Query: 672 WRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           +RP++    PD++I+HG       + GL    IA T+     + R
Sbjct: 576 YRPVLRLGFPDKFIEHGDVESLFKKYGLDSQSIADTILQRYKEMR 620


>gi|409201479|ref|ZP_11229682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas
           flavipulchra JG1]
          Length = 620

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/632 (47%), Positives = 408/632 (64%), Gaps = 26/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I+ P  ++ L   +L   +DELR  ++ +VS++ GH  S LG +ELTVALHYV+N
Sbjct: 9   PLLALIDEPSQLRQLPQHKLTAFSDELREYLLNSVSQSSGHFASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHK+LTGRRD+MHT+RQ DGL  F  R ESEYD F  GHSSTSIS
Sbjct: 69  TPSDRLVWDVGHQAYPHKLLTGRRDRMHTIRQKDGLHPFPYREESEYDTFSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+  + +G     VAVIGDGAMTAG A+EAMN+AG ++ DM+VILNDN ++S+  
Sbjct: 129 AALGMAIAAEKEGIGRKTVAVIGDGAMTAGMAFEAMNHAGDINPDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++  +++ S      +RE +K +   +  P+ ELA +++E+ +GMI 
Sbjct: 188 N--------VGALTNHFAKILSGSFYTNIREGSKKLLSGV-PPVKELAGRMEEHLKGMI- 237

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               T FEELG  YIGP+DGHNVD LV  L  ++N K  GP L+HV T+KG+GY  AE  
Sbjct: 238 -IPGTFFEELGFNYIGPIDGHNVDTLVDTLRNMRNLK--GPQLLHVKTQKGKGYKPAEAD 294

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YH V KFDP+     KS     +++  F + L   A  D  ++AI  AM  G+G+  
Sbjct: 295 PIGYHAVPKFDPSVHSLPKSKPSAPTFSKVFGDWLCDMAAQDNKLMAITPAMREGSGMVR 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P + FDV IAEQHAVT AAG ACE L P  AIYSSF+QRAYDQ++HDV LQ LPV
Sbjct: 355 FSKEYPAQYFDVAIAEQHAVTLAAGFACEDLNPVVAIYSSFLQRAYDQLIHDVALQNLPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G++D++F+ C+PNMV+MAPSD  E   M+ T   + DRP+  
Sbjct: 415 LFAIDRAGVVGADGETHQGAYDLSFLRCIPNMVIMAPSDLNECRQMLYTGHRL-DRPAAV 473

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+    E+    +   +EVGKG+++ EGE++A+L +GT ++S  A +  L +    
Sbjct: 474 RYPRGSAGSAEI--DTEMTAIEVGKGKVVREGEKLAILSFGTLLESAQAVAEELNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD ALI  L  +HE  +T+E+ +I GG GS V ++L   G        +
Sbjct: 528 -TLVDMRFVKPLDCALIEELVVTHERFVTLEDNAIAGGAGSAVSEYLIAQG---HQKPIK 583

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPD +I HGS  +  A+ GL    I+  +
Sbjct: 584 LLGLPDEFIKHGSQTEIHAELGLNSEGISQQI 615


>gi|296133202|ref|YP_003640449.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
 gi|296031780|gb|ADG82548.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
          Length = 638

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 305/619 (49%), Positives = 413/619 (66%), Gaps = 28/619 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLL+ I  P  +K LS+ +L  LA ELR  +I  VS+TGGHL  +LGV+ELT+ALHYVF
Sbjct: 3   TPLLNQIKTPEDLKRLSLDDLNILARELRQKLIHVVSRTGGHLAPNLGVVELTLALHYVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           +AP+D+I+WDVGHQ+Y HK+L+GR+ +  T+RQ  GLSGF KRSESEYD F TGHSSTSI
Sbjct: 63  DAPRDKIVWDVGHQSYVHKLLSGRQQEFDTLRQYGGLSGFPKRSESEYDSFNTGHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA+ RDLK    +V+AVIGDGA+T G A+EA+N+AG+L +++IV+LNDN ++S+ 
Sbjct: 123 SAVLGMALARDLKKENFHVIAVIGDGALTGGMAFEALNHAGHLGTNIIVVLNDN-EMSIS 181

Query: 254 TATLDGPIPPVGALSSALSRLQS----NRPLRELREVAKGVTKQIGGPMHELAAKV-DEY 308
                     VGALS  LSR+++    NR   E+  + K +   IG  + +   ++ D +
Sbjct: 182 EN--------VGALSGYLSRMRTDPMYNRHKEEMENLLKKIP-SIGPTVFKAIERIKDSF 232

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
              ++ G    +FEELG  Y+GP+DGHN+ ++  +LE  K TK  GP+++HVVT KG+GY
Sbjct: 233 KYLVVPG---MIFEELGFTYLGPIDGHNIMEVKTVLERAKRTK--GPIMVHVVTRKGKGY 287

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGG 428
             AEK  D++HG+  F+  TG+   +S+   SYT  F + L   A  D+ ++AI AAM  
Sbjct: 288 EPAEKNPDRFHGIGPFNINTGEPVSASS-VVSYTEIFGKTLCQLAADDERLLAITAAMPT 346

Query: 429 GTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVD 488
           GTGL  F   FP R FDVGIAEQHAVT AAGLA EG +P  AIYS+F+QRAYDQ++HDV 
Sbjct: 347 GTGLTRFAELFPDRFFDVGIAEQHAVTLAAGLATEGFRPVVAIYSTFLQRAYDQILHDVA 406

Query: 489 LQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAID 548
           +Q LPV FA+DRAGLVG DG TH G +D  ++  +PNMV+MAP DE EL  M+ TA  + 
Sbjct: 407 MQDLPVIFAVDRAGLVGEDGETHQGIYDFAYLRHIPNMVIMAPKDENELRFMLKTAQLL- 465

Query: 549 DRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALL 608
           D+P   RYPRG+GIGV++    K IP  VGK  +L +G+ +AL   G  V   LAA+  L
Sbjct: 466 DKPVAIRYPRGSGIGVQISEEIKDIP--VGKAEVLRDGKDIALFAIGPLVYEALAAAESL 523

Query: 609 ESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLD 667
             +G+ + V + RF KPLD   I    +    +IT+EE ++ GGFGS V++ L + GL  
Sbjct: 524 HEHGIEVAVVNCRFIKPLDVETITEYTRKTGKVITLEEHALEGGFGSAVLELLQEQGL-- 581

Query: 668 GTVKWRPLVLPDRYIDHGS 686
                  + LPDR+I+ G+
Sbjct: 582 -RAHVERIGLPDRFIEQGA 599


>gi|297569006|ref|YP_003690350.1| deoxyxylulose-5-phosphate synthase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924921|gb|ADH85731.1| deoxyxylulose-5-phosphate synthase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 636

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 310/636 (48%), Positives = 406/636 (63%), Gaps = 23/636 (3%)

Query: 62  SERGEYHSQRPPTP-LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSL 120
           +E      Q+P +  LL +I  P  ++ L   +L  LA ELR+ +I  V+ TGGHL   L
Sbjct: 3   NENNHQPGQKPGSACLLPSIESPCELRRLKAEQLPALAAELRSTIINTVASTGGHLAPCL 62

Query: 121 GVIELTVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESE 180
           GV+ELT+ALHY+FN P D+I+WDVGHQ Y HK+LTGR+ +  T+RQ  G+SGF KR ESE
Sbjct: 63  GVVELTLALHYIFNTPNDKIIWDVGHQCYAHKLLTGRQARFATLRQFGGISGFPKREESE 122

Query: 181 YDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM 240
           +D F TGHSSTSISA LGMA G +LKG  N  +AVIGDG+MT G A+E +N AG+L  ++
Sbjct: 123 FDHFDTGHSSTSISAALGMAAGTELKGENNKTIAVIGDGSMTGGLAFEGLNQAGHLGKNL 182

Query: 241 IVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTK--QIGGPM 298
           IVILNDN+    P          VGALSS LSR  + R +  +++  + + K  Q+G  +
Sbjct: 183 IVILNDNEMSISPN---------VGALSSFLSRKLTGRTMVRIKKELEHLLKNFQMGENV 233

Query: 299 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 358
            +L  + +E  +G    +   LFE L   YIGP+ GH++D L+     V++  + GPVLI
Sbjct: 234 LQLLKRSEESLKGFF--TPGMLFEALKFEYIGPIPGHHLDSLLETFRNVRDF-SQGPVLI 290

Query: 359 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 418
           HV+T KG+GYP AE+    +HGV  F+ ATGK F +     SYT  F + L+  A+ D  
Sbjct: 291 HVITTKGKGYPPAEERPGDFHGVGPFEVATGKPFATEG-PPSYTKVFGDTLVELAQQDPR 349

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           + AI AAM  GTGLN F   FP R FDVGIAEQHA TFAAGLACEGL+P  A+YS+F+QR
Sbjct: 350 ICAITAAMPSGTGLNRFAAEFPDRFFDVGIAEQHAATFAAGLACEGLRPVVAVYSTFLQR 409

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           A+DQVVHD+ L +LPV FA+DR G+VG DGPTH G FD++F+  +PN+++MAP DE EL 
Sbjct: 410 AFDQVVHDICLPELPVIFAIDRGGVVGDDGPTHHGVFDLSFLRIIPNLILMAPKDENELR 469

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
           +M+ TA      P   RYPRG G+GV L P  + IP   GKG +L EG  V LL  G  V
Sbjct: 470 NMLFTALQ-SPEPVAIRYPRGAGLGVTLAPELQKIPF--GKGELLQEGSDVLLLPVGNRV 526

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVV 657
            + L A+A L   G+   V + RF KPLD  LI   A     ++TVE+    GGFGS V+
Sbjct: 527 ATALEAAAGLAKTGVSAAVINPRFVKPLDGDLICQWAGKTGRVVTVEDNVRAGGFGSAVL 586

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 693
           + L + GL    VK + L LPDR+++HGS   QL Q
Sbjct: 587 ELLQRRGL--AGVKVKTLGLPDRFLEHGS-QQQLWQ 619


>gi|381400195|ref|ZP_09925174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella kingae PYKK081]
 gi|380834789|gb|EIC14615.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella kingae PYKK081]
          Length = 631

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/645 (46%), Positives = 424/645 (65%), Gaps = 31/645 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ LS+ +L ++A ELR  ++ +V KTGGH  S+LGVIELT+ALHYV+
Sbjct: 4   TPLLDTIQSPQDLRQLSVAQLPKVAHELREFLLDSVGKTGGHFASNLGVIELTIALHYVY 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+D ++WDVGHQ+YPHK+LTGR+++M ++RQ  GL+GF KRSESEYD FG GHSSTSI
Sbjct: 64  NTPEDHLVWDVGHQSYPHKVLTGRKNRMDSIRQFGGLAGFPKRSESEYDDFGVGHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
            A LGMAV   L G     VA+IGDGAMTAGQA+EA+N AG +D +++VILNDN ++S+ 
Sbjct: 124 GAALGMAVANQLSGSAARSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDN-EMSIS 182

Query: 254 TATLDGPIPPVGALSSALSR--LQSNRP-LRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
                   P VGAL   L+R  ++  R  L E++  +  V  ++  P+ E+A K +   +
Sbjct: 183 --------PNVGALPKYLARNVMRDWRDILHEIKHHSNKVLDKLPTPVKEMAEKAETKFK 234

Query: 311 GMIS-----GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
            + S         +LFE  G  Y G +DGHN+  L+ +L++++  K  GP L+H++T+KG
Sbjct: 235 AIASEGEHIKHSLSLFENFGFEYTGAIDGHNLPQLIEVLKDLRQRK--GPQLLHIITKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GY  AE    KYH + K          +S    +YT  F + L  +A  D+ +VAI  A
Sbjct: 293 QGYKLAENDPVKYHAIGKQPAPVANAPTASQPRPTYTQIFGQWLCDQAAADEKLVAITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+GL  F ++FPTR FDVGIAEQHA+TFAAGLA +G+KP  AIYS+F+QR YDQ++H
Sbjct: 353 MREGSGLVEFEQQFPTRYFDVGIAEQHAITFAAGLATQGVKPVVAIYSTFLQRGYDQLLH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPV FA+DRAG+VGADGPTH G++D++F+ C+PNMV+ APSDE E   +++T  
Sbjct: 413 DVALQNLPVLFAIDRAGIVGADGPTHAGAYDLSFLRCVPNMVIAAPSDENECRLLLSTCY 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + ++P+  RYPRG+G G  +    + +P  VGKG +  +GE+VA+L +G+ VQ+ L   
Sbjct: 473 QL-NQPTAVRYPRGSGCGATVERDLQTVP--VGKGIVRKQGEKVAILAFGSMVQAALGV- 528

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDG 664
               ++ L  TVAD RF KPLD  LI  LA+SH+ L+ VEE + +GG GS V++ LAQ+G
Sbjct: 529 ----ADALNATVADMRFVKPLDVDLIGQLAQSHDYLVCVEENAEMGGAGSAVLEVLAQNG 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
               T+      +PD   +HG     L Q GL+ S +   + + L
Sbjct: 585 WYKPTLL---CAIPDIVTEHGDSHILLDQMGLSQSSLQQRIRDWL 626


>gi|399053796|ref|ZP_10742595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. CF112]
 gi|398048573|gb|EJL41045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. CF112]
          Length = 628

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/647 (47%), Positives = 423/647 (65%), Gaps = 26/647 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL TIN P  +K  + ++L  LA E+R  ++  +SKTGGHL  +LGV+ELT+ALHYVFN+
Sbjct: 2   LLTTINDPQDLKKCNSQQLHTLASEIRQFLVETLSKTGGHLAPNLGVVELTLALHYVFNS 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+++WDVGHQ Y HK+LTGRRD   T+RQ  GL GF K +ES +D + TGHSSTS+SA
Sbjct: 62  PKDKLIWDVGHQAYVHKMLTGRRDMFPTLRQYKGLCGFPKMNESPHDVWETGHSSTSLSA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            +GMA  RDLK  KN+VVA+IGDGA+T G A EA+N+ G+   ++IV+LNDN+    P  
Sbjct: 122 AMGMATARDLKKEKNHVVAIIGDGALTGGMALEALNHIGHERKNVIVVLNDNEMSIAPN- 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI---GGPMHELAAKV-DEYARG 311
                   VGAL + L +++S    +  ++  +G+ K I   GG +  +A +  D     
Sbjct: 181 --------VGALHNYLGKIRSTENYQWAKDEVEGLLKSIPAVGGKLASIAERFKDSMKYL 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           ++SG    LFEELG  YIGP+DGHN++ LV  L+  K TK  GPVLIH +T+KG+GY  A
Sbjct: 233 LVSG---VLFEELGFTYIGPIDGHNMELLVDTLKTAKQTK--GPVLIHAITKKGKGYAPA 287

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E  + K+HG+  +   +G   KS+    +YT+ FAE +I  A  DK +VA+  AM  G+G
Sbjct: 288 EADSVKWHGIGTYKIESGDTPKSAP---TYTSVFAETMIELAAEDKSLVAVTPAMPAGSG 344

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F +++P R FDVGIAEQHA TFAAGLA +GLKP  AIYS+F+QRAYDQ++HDV  QK
Sbjct: 345 LIPFGQKYPDRLFDVGIAEQHACTFAAGLATQGLKPVLAIYSTFLQRAYDQLIHDVARQK 404

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           L V FA+DRAGLVGADG TH G +D+ FM  +PNMV+MAP DE EL HM+ TA A ++ P
Sbjct: 405 LNVVFAVDRAGLVGADGETHQGMYDIAFMRIIPNMVIMAPKDENELRHMMKTAMAYNEGP 464

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             +RYPR    GV L    + +P  +GK  I+ EG++VA+L +G   +    A   L + 
Sbjct: 465 ISYRYPRLPARGVPLDRELQVLP--IGKAEIVREGKQVAILSFGHVFELAEQAVNQLNAE 522

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTV 670
           G+R  + +ARFCKPLD  L+  LAK    ++TVEEG  +GGFGS V++   + G     V
Sbjct: 523 GIRPMLVNARFCKPLDEELLFRLAKEGYDIVTVEEGCEMGGFGSAVIECYNRAGY--HGV 580

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 717
             + + +PD +++HGS  +Q  +  LT  +IA+ V  ++  ++  LE
Sbjct: 581 NVQVVAVPDYFVEHGSVKEQRQEVELTVENIASRVRALMPISKGVLE 627


>gi|411117534|ref|ZP_11390021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
           cyanobacterium JSC-12]
 gi|410713637|gb|EKQ71138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
           cyanobacterium JSC-12]
          Length = 636

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/647 (46%), Positives = 416/647 (64%), Gaps = 25/647 (3%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L  + +P  + +LS  +L+Q+A ++R   +  V+ TGGHLG  LGV+ELT+AL+Y  +  
Sbjct: 3   LSELTHPNQLHSLSTYQLQQIARQIREKHLETVAATGGHLGPGLGVVELTIALYYTLDLD 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +D+++WDVGHQ YPHK+LTGR  + HT+RQ DG++G+ KRSES++D FG GH+STSISA 
Sbjct: 63  QDKVIWDVGHQAYPHKMLTGRYSRFHTLRQKDGIAGYLKRSESKFDHFGAGHASTSISAA 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTA 255
           LGMA+ RDLKG K  VVAVIGDGA+T G A EA+N+AG+L  ++++V+LNDN+    P  
Sbjct: 123 LGMALARDLKGEKFKVVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN- 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM--- 312
                   VGA+   L++L+ + P++ L +  +   K +      L+  ++    GM   
Sbjct: 182 --------VGAIPRYLNKLRLSPPVQFLSDNLEEQLKHLPFVGESLSPDLNRLKEGMKRL 233

Query: 313 -ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +   G+ +FEELG  Y+GP+DGHN+++L+A  ++    KT GPVL+HV T KG+GY  A
Sbjct: 234 AVPKVGA-VFEELGFTYMGPIDGHNLEELIATFQQAH--KTPGPVLVHVATVKGKGYEVA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSA-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           E+    YH    F+ ATGK   S+  +   Y+  F E L   AE +  V+ I AAM  GT
Sbjct: 291 EQDQVGYHAQNPFNIATGKAIPSTKPKPPGYSKVFGETLTKIAENNPKVIGITAAMATGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL++  +R P +  DVGIAEQHAVT AAGLACEG++P  AIYS+F+QRA+DQ+VHDV +Q
Sbjct: 351 GLDILQKRLPDQYIDVGIAEQHAVTLAAGLACEGMRPVAAIYSTFLQRAFDQIVHDVCIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
           KLPV F +DRAG+VGADGPTH G +D+ ++ C+PNMV+MAP DEAEL  M+ T     D 
Sbjct: 411 KLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVLMAPKDEAELQRMIVTGIEYTDG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
               RYPRGNG GV  P   +G  PLE+GKG IL  G+ V L+ YG+ V   +  S +L 
Sbjct: 471 AIALRYPRGNGYGV--PLMEEGWEPLEIGKGEILRTGDDVLLVAYGSMVYPSMQTSEILH 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
            +G+  TV +ARF KPLD  LI  LA+    ++T+EEG + GGFGS V + L      D 
Sbjct: 529 EHGIEATVVNARFAKPLDTELILPLAEKIGRVVTLEEGCLPGGFGSAVAEALLD---ADI 585

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 715
           +V    + +PD  +DH SP    A  GLTP+ +A  +       ++A
Sbjct: 586 SVSLTRIGVPDILVDHASPDQSKASLGLTPAQMAERILTKFFSQQQA 632


>gi|387771793|ref|ZP_10127950.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           parahaemolyticus HK385]
 gi|386908178|gb|EIJ72876.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           parahaemolyticus HK385]
          Length = 617

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/639 (48%), Positives = 414/639 (64%), Gaps = 32/639 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ LADELRA ++  VS++ GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLNKDQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD++ T+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESIYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G+I 
Sbjct: 185 N--------VGALNNHLARIFSGSLYTTMRDGSKKILDKV-PTIKNFMKKSEEHMKGVIF 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+DDLV  LE +++ K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 SPESTLFEELGFNYIGPIDGHNIDDLVKTLENMRDLK--GPQFLHIRTKKGKGYEPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +GK  K+     +Y+  F   L   AE D  ++ I  AM  G+G+  
Sbjct: 294 PIGFHGVPKFDPESGKLPKTKT-IPTYSDIFGNWLCEIAEQDPKLIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPEQYFDVAIAEQHAVTFATGLAIAGFKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM +M PSDE E+  M+ TA ++ + P+  
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMTPSDENEMRQMLFTAYSM-NTPTAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GV L P      LEVGKGR++ EG++VA+L +GT +     A  + E N   
Sbjct: 472 RYPRGNAQGVALQPMQT---LEVGKGRLIREGKKVAILNFGTMLHE---AQIVAEHND-- 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KP+D  LI  LA SH++L+T+EE +I GG GS V ++L          K +
Sbjct: 524 YTLADMRFVKPIDGDLITQLADSHDLLVTIEENAIQGGAGSTVNEYLQSFN------KIK 577

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           PL +   PD +I   +  +  A+ GL    I   +  +L
Sbjct: 578 PLAMLGIPDHFIPQATQPEAYAEIGLNAEGIEQKIQALL 616


>gi|421566212|ref|ZP_16011968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           NM3081]
 gi|402340821|gb|EJU76012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           NM3081]
          Length = 637

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 314/653 (48%), Positives = 418/653 (64%), Gaps = 49/653 (7%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+PLLD I+ P  ++ L  ++L +LA ELRA ++ +V +TGGH  S+LG +ELT+ALHYV
Sbjct: 3   PSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGGHFASNLGAVELTIALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           ++ P+D+++WDVGHQ+YPHKILTGR+++MHTMRQ  GL+GF KRSESEYD FG GHSSTS
Sbjct: 63  YDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           I A LGMA    L G     VA+IGDGAMTAGQA+EA+N AG +D D++V+LNDN ++S+
Sbjct: 123 IGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDN-EMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSN--RPLRELREVAKG----VTKQIGGPMHELAAKVD 306
                    P VGAL   L+   SN  R +  L    K     V  +I G M E A KV+
Sbjct: 182 S--------PNVGALPKYLA---SNVVRDMHGLLSTVKAQTGKVLDKIPGAM-EFAQKVE 229

Query: 307 EYARGMI-----SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
              + +      +    +LFE  G  Y GPVDGHNV++LV +L+++++ K  GP L+HV+
Sbjct: 230 HKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRSRK--GPQLLHVI 287

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ-----SYTTYFAEALIAEAEVD 416
           T+KG GY  AE    KYH VAK       Q  S    +     +YT  F + L   A  D
Sbjct: 288 TKKGNGYKLAENDPVKYHAVAKLPKEGAAQMPSEKEPKPTAKPTYTQVFGKWLCDRAAAD 347

Query: 417 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 476
             +VAI  AM  G+GL  F +RFP R FDVGIAEQHAVTFA GLACEG+KP  AIYS+F+
Sbjct: 348 SRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFL 407

Query: 477 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 536
           QRAYDQ+VHD+ LQ LPV FA+DRAG+VGADGPTH G +D++F+ C+PNM+V APSDE E
Sbjct: 408 QRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCIPNMIVAAPSDENE 467

Query: 537 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGT 596
              +++T     D P+  RYPRG G GV +  G + +  E+GKG I  EGE+ A + +G+
Sbjct: 468 CRLLLSTCYQA-DAPAAVRYPRGTGTGVPVSDGMETV--EIGKGIIRREGEKTAFIAFGS 524

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSH 655
            V   LA +  L +     TVAD RF KP+D  LI  LA+SH+ ++T+EE +  GG GS 
Sbjct: 525 MVAPALAVAGKLNA-----TVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGSA 579

Query: 656 VVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLTPSHIAATV 705
           V++ LA+ G+       +P++L    D    HG P   L   GL+   +  +V
Sbjct: 580 VLEVLAKHGIC------KPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVERSV 626


>gi|333924274|ref|YP_004497854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           carboxydivorans CO-1-SRB]
 gi|333749835|gb|AEF94942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           carboxydivorans CO-1-SRB]
          Length = 639

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 316/637 (49%), Positives = 409/637 (64%), Gaps = 27/637 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L TI  P  ++NL  +EL+ LA E+R  +I  VS TGGHL  +LGV+ELT+A+H VFN+
Sbjct: 4   ILKTIYSPQDLQNLDYKELQCLAREIRETLINTVSVTGGHLAPNLGVVELTIAIHRVFNS 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
             DRI+WDVGHQ+Y HK+LTGR+ +  T+RQ  GLSGF KR ES +D F TGHSSTSISA
Sbjct: 64  AVDRIIWDVGHQSYVHKLLTGRQAQFSTLRQYGGLSGFPKRDESIHDAFDTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGM + RDLKG K +VVAVIGDG+MT G A+EA+N+AG+L  ++IVILNDN+    P  
Sbjct: 124 ALGMVLARDLKGEKYSVVAVIGDGSMTGGMAFEALNHAGHLKKNLIVILNDNEMSIAPN- 182

Query: 256 TLDGPIPPVGALSSALSRLQSN-RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM-- 312
                   VGALSS LS L+++ +  R   E+A+ + K   GP  +L   VD     +  
Sbjct: 183 --------VGALSSYLSSLRTDPKYSRSKDEIAELLQKIPHGP--KLLKVVDRLKDSLKY 232

Query: 313 --ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
             + G    LFEELG  Y+GPVDGH++  +  +L++ KN    GPVL+HV+T+KG+GY  
Sbjct: 233 LVVPG---MLFEELGFTYLGPVDGHDIKAVTTMLKQAKNL--GGPVLVHVLTKKGKGYEP 287

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AEK  D +HGV  FD  TG   K      SYT  F + +I  A+ D  ++ I AAM  GT
Sbjct: 288 AEKNPDLFHGVGPFDVVTGAIKKIPGAPPSYTQIFGQTMINLAKQDDKIIGITAAMPSGT 347

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GLN F + FP R FDVGIAEQHAVT AAGLA  G +P  AIYS+F+QRAYDQV+HDV LQ
Sbjct: 348 GLNKFAQEFPNRYFDVGIAEQHAVTMAAGLAAGGYRPVVAIYSTFLQRAYDQVLHDVCLQ 407

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV FA+DRAGLVG DGPTH G FD+ ++  +PNMV+MAP DE EL HM+ T A   + 
Sbjct: 408 NLPVTFALDRAGLVGDDGPTHHGVFDLAYLRNIPNMVIMAPKDENELQHMLKT-AVYHNA 466

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG G GV +    + IP  +G+  +L +GE V LL  G  V   L A+  L +
Sbjct: 467 PTAVRYPRGAGEGVAIDSQLQTIP--IGQAEVLWDGEDVVLLAIGNMVPEALKAAENLRA 524

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
            G+   V +AR+ KPLD  LI   A     L+TVEE  + GGFGS V++ L + GL +  
Sbjct: 525 QGISAAVINARYVKPLDEELILHYAARTGHLVTVEEHVLMGGFGSAVLELLERAGLSE-- 582

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
           VK + + +PD +++HG      A  GLT   I  TV 
Sbjct: 583 VKVKRIGIPDCFVEHGKQKILRANYGLTAEGIVETVL 619


>gi|451948108|ref|YP_007468703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfocapsa sulfexigens
           DSM 10523]
 gi|451907456|gb|AGF79050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfocapsa sulfexigens
           DSM 10523]
          Length = 634

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 316/637 (49%), Positives = 408/637 (64%), Gaps = 24/637 (3%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T L+D I  P  ++ LSI EL+ +AD+LR  +I  VSKTGGHL  SLGV+ELT+ALHYVF
Sbjct: 12  TRLVD-IKSPEDLRKLSIPELETIADDLRETIINTVSKTGGHLAPSLGVVELTLALHYVF 70

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P D+++WDVGHQTY HK+LTGR+DK  T+RQ  GLSGF K  ESEYD F TGHSSTSI
Sbjct: 71  NTPNDKLVWDVGHQTYAHKLLTGRQDKFSTLRQYKGLSGFPKFKESEYDAFETGHSSTSI 130

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
           SA LGMA  +DLK   N VVA+IGDG+MTAG A+EA+N AG+LD D+IVILNDN ++S+ 
Sbjct: 131 SAALGMACAKDLKKDSNKVVAIIGDGSMTAGIAFEALNQAGHLDKDLIVILNDN-EMSIS 189

Query: 254 TATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKVDEYAR 310
                     VGA+SS LSR  +++ +R LR+      K    +G     +  K +E  +
Sbjct: 190 EN--------VGAMSSFLSRQLTSKTVRRLRKHISTRLKDLHGVGDRFLNVLKKSEENIK 241

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
                + + LFE L  YYIGP+ GH ++DL+  LE +++    GPVL+HV+T+KGRGY  
Sbjct: 242 SFF--TPAMLFEALKFYYIGPISGHQLEDLIPTLENIRDN-VDGPVLVHVITQKGRGYGP 298

Query: 371 AEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           AE     YHGV  FD  TG    SS+   SYT  F +++   A  + DVVAI AAM  GT
Sbjct: 299 AEANPGNYHGVGPFDVLTGVPIPSSSPI-SYTEVFGKSICTIARNNPDVVAISAAMPAGT 357

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL  F + FP R FDVGIAEQH VTFAAGLA EG +P  AIYSSF QRA DQ++HDV + 
Sbjct: 358 GLTNFSKEFPDRFFDVGIAEQHGVTFAAGLAVEGKRPVVAIYSSFFQRALDQIIHDVCIP 417

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV  A+DR G+VG DGPTH G FD++F+  +PN+  MAP DE EL HM+ TA ++   
Sbjct: 418 SLPVTLAIDRGGVVGDDGPTHHGVFDISFLRFIPNLTYMAPKDENELQHMLHTAISLPG- 476

Query: 551 PSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES 610
           P+  RYPRG G  V L P    + LEVGKG +L +GE + LL  G  V   + A+  LE 
Sbjct: 477 PAAIRYPRGAGENVPLDP--DFVNLEVGKGELLRQGEDILLLPVGNRVYPAIKAAEGLEK 534

Query: 611 NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT 669
            G+   V + RF KPLD  LI   A+    ++T+E+ +  GGFGS V++ L+++ L    
Sbjct: 535 LGINAAVINPRFIKPLDDELICEWARKTGRVVTIEDNAEHGGFGSLVLELLSKNKLF--A 592

Query: 670 VKWRPLVLPDRYIDHGSPADQLAQAGL-TPSHIAATV 705
           VK   L  PD +I+HG        + L +PS I A +
Sbjct: 593 VKTHLLGYPDHFIEHGPQKTLWKNSKLDSPSIINAAM 629


>gi|386389470|ref|ZP_10074284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           paraphrohaemolyticus HK411]
 gi|385695240|gb|EIG25802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           paraphrohaemolyticus HK411]
          Length = 617

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 306/639 (47%), Positives = 415/639 (64%), Gaps = 32/639 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ LADELRA ++  VS++ GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQINSPEDLRLLNKDQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD++ T+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESVYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAEKENVGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G+I 
Sbjct: 185 N--------VGALNNHLARIFSGSLYTTMRDGSKKILDKV-PTIKNFMKKSEEHMKGVIF 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+DDLV  LE +++ K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 SPESTLFEELGFNYIGPIDGHNIDDLVKTLENMRDLK--GPQFLHIRTKKGKGYQPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +GK  K+     +Y+  F   L   A  D  ++ I  AM  G+G+  
Sbjct: 294 PIGFHGVPKFDPESGKLPKTKT-IPTYSDIFGNWLCEIAIQDPKLIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPEQYFDVAIAEQHAVTFATGLAIAGFKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM +M PSDE E+  M+ TA ++ + P+  
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMTPSDENEMRQMLFTAYSM-NTPTAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GVEL P      LEVGKGR++ +G++VA+L +GT +     A  + E N   
Sbjct: 472 RYPRGNAQGVELQPMQV---LEVGKGRLIRKGKKVAILNFGTMLHE---AQIVAERN--N 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+AD RF KP+D  LI+ LA SH++L+T+EE +I GG GS V ++      L    K +
Sbjct: 524 YTLADMRFVKPIDGELIKQLADSHDLLVTLEENAIQGGAGSAVNEY------LQSINKIK 577

Query: 674 PLVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
           PL +   PD +I   +  +  A+ GL    I   +  +L
Sbjct: 578 PLAMLGIPDHFIPQATQPEAYAEIGLNAEGIEQKILALL 616


>gi|333375711|ref|ZP_08467516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella kingae ATCC
           23330]
 gi|332969881|gb|EGK08884.1| 1-deoxy-D-xylulose-5-phosphate synthase [Kingella kingae ATCC
           23330]
          Length = 631

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/645 (46%), Positives = 423/645 (65%), Gaps = 31/645 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           TPLLDTI  P  ++ LS  +L ++A ELR  ++ +V KTGGH  S+LGVIELT+ALHYV+
Sbjct: 4   TPLLDTIQSPQDLRQLSASQLPKVAHELREFLLDSVGKTGGHFASNLGVIELTIALHYVY 63

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P+D ++WDVGHQ+YPHK+LTGR+++M ++RQ  GL+GF KRSESEYD FG GHSSTSI
Sbjct: 64  NTPEDHLVWDVGHQSYPHKVLTGRKNRMDSIRQFGGLAGFPKRSESEYDDFGVGHSSTSI 123

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLP 253
            A LGMAV   L G     VA+IGDGAMTAGQA+EA+N AG +D +++VILNDN ++S+ 
Sbjct: 124 GAALGMAVANQLSGSAARSVAIIGDGAMTAGQAFEALNCAGDMDVNLLVILNDN-EMSIS 182

Query: 254 TATLDGPIPPVGALSSALSR--LQSNRP-LRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
                   P VGAL   L+R  ++  R  L E++  +  V  ++  P+ E+A K +   +
Sbjct: 183 --------PNVGALPKYLARNVMRDWRDILHEIKHHSNKVLDKLPTPVKEMAEKAETKFK 234

Query: 311 GMIS-----GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
            + S         +LFE  G  Y G +DGHN+  L+ +L++++  K  GP L+H++T+KG
Sbjct: 235 AIASEGEHIKHSLSLFENFGFEYTGAIDGHNLPQLIEVLKDLRQRK--GPQLLHIITKKG 292

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +GY  AE    KYH + K          +S    +YT  F + L  +A  D+ +VAI  A
Sbjct: 293 QGYKLAENDPVKYHAIGKQPAPAANAPTASQPRPTYTQIFGQWLCDQAAADEKLVAITPA 352

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  G+GL  F ++FPTR FDVGIAEQHA+TFAAGLA +G+KP  AIYS+F+QR YDQ++H
Sbjct: 353 MREGSGLVEFEQQFPTRYFDVGIAEQHAITFAAGLATQGVKPVVAIYSTFLQRGYDQLLH 412

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ LPV FA+DRAG+VGADGPTH G++D++F+ C+PNMV+ APSDE E   +++T  
Sbjct: 413 DVALQNLPVLFAIDRAGIVGADGPTHAGAYDLSFLRCVPNMVIAAPSDENECRLLLSTCY 472

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
            + ++P+  RYPRG+G G  +    + +P  VGKG +  +GE+VA+L +G+ VQ+ L   
Sbjct: 473 QL-NQPTAVRYPRGSGCGAAVERDLQTVP--VGKGIVRKQGEKVAILAFGSMVQAALGV- 528

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDG 664
               ++ L  TVAD RF KPLD  LI  LA+SH+ L+ VEE + +GG GS V++ LAQ+G
Sbjct: 529 ----ADALNATVADMRFVKPLDVDLIGQLAQSHDYLVCVEENAEMGGAGSAVLEVLAQNG 584

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
               T+      +PD   +HG     L Q GL+ S +   + + L
Sbjct: 585 WYKPTLL---CAIPDIVTEHGDSHILLDQIGLSQSSLQQRISDWL 626


>gi|417845648|ref|ZP_12491674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21639]
 gi|341954717|gb|EGT81190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21639]
          Length = 625

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/638 (46%), Positives = 411/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR  ++ +VS+T GHL S LG +ELTV LHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRGYLLESVSQTSGHLASGLGTVELTVVLHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ +G+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKNGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V +IGDGA+TAG A+EA+N+AG + +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENAGRKTVCIIGDGAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSIYSTLRDGSKKILDKV-PPVKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEE G  YIGPVDGHN+D+LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEEFGFNYIGPVDGHNIDELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K + +  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKHNTKP-TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPEQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGPTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGV+L P      L +GK R++ EG+++A+L +GT + S L AS  L +    
Sbjct: 475 RYPRGNAIGVKLTPLEM---LPIGKSRLIREGQKIAILNFGTLLPSALEASEKLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 528 -TVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + L    L    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALKDLELDSKGIEEKILNFIAK 621


>gi|118580817|ref|YP_902067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM
           2379]
 gi|118503527|gb|ABL00010.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM
           2379]
          Length = 626

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 319/635 (50%), Positives = 410/635 (64%), Gaps = 23/635 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LLDTI+ P  +K L +  L Q+A+ELR  +I   S  GGHL  SLGV+ELT+ALH VF+ 
Sbjct: 3   LLDTIDSPADLKRLPVSRLPQVAEELRRVIIQTCSTNGGHLAPSLGVVELTIALHRVFST 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HK+LTGRRD+  T+R+ DG+SGF KR ES +D F  GH+STSISA
Sbjct: 63  PEDKIVWDVGHQAYAHKLLTGRRDRFSTLRKLDGISGFPKRDESPHDAFEVGHASTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
             G+A  RDL GR+N V+AVIGDG+MT G AYEAMN+AG+++ DMIVILNDN ++S+   
Sbjct: 123 ATGLAAARDLAGRRNKVLAVIGDGSMTGGMAYEAMNHAGHMNRDMIVILNDN-EMSIAEN 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELR---EVAKGVTKQIGGPMHELAAKVDEYARGM 312
                   VGALS+ L+R  S+  +   +   E   G    +G  +  LA K+++  +G 
Sbjct: 182 --------VGALSNFLTRTGSSEFVYRFKKNVESFLGRKDTVGKNLLHLAKKLEDSFKGF 233

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
              +   LFE  G  YIGP+DGH++  L+  LE+VK  K    VLIHV+T+KG+GY  AE
Sbjct: 234 F--TPGMLFEAFGFEYIGPIDGHDLPMLLETLEKVK--KYHDAVLIHVLTKKGKGYKPAE 289

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                +HGV  FD  +G+  K      SYT  F  AL   A  D+ VVAI AAM  GTGL
Sbjct: 290 DDPSLFHGVGPFDLESGRVLKGKGGAASYTAIFGSALCKLAADDERVVAITAAMPDGTGL 349

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F R+FP R FDVGIAEQHAVTFAAGLA +G +P   +YSSF+QRAYD V HDV LQ L
Sbjct: 350 IPFSRQFPKRFFDVGIAEQHAVTFAAGLATQGFRPVFTVYSSFLQRAYDLVFHDVCLQNL 409

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAG+VG DGPTH GS D++ +  LPNM VMAP DE EL HM+ATA  +   P 
Sbjct: 410 PVIFALDRAGVVGNDGPTHHGSLDISLLRHLPNMTVMAPRDENELQHMLATALGMQG-PV 468

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN- 611
             RYPRGNG+GV L       PL VG+  +L EG+  A+L  G+ V   L A+  LE + 
Sbjct: 469 ALRYPRGNGVGVAL--DQIITPLPVGRAEVLREGKDGAVLALGSMVHPALEAALQLERDG 526

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           G  L V +ARF KPLD  LI+ LA+++  LIT+EE ++ GGFGS V++ L + G + GT 
Sbjct: 527 GPSLAVVNARFVKPLDEELIQFLARTYGRLITLEENALQGGFGSAVLELLEEKG-IRGTR 585

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             R L  PD  I  G      A  GL P+ +A+++
Sbjct: 586 VLR-LGYPDAQIPQGDQGVLRAMLGLDPAGLASSM 619


>gi|304312211|ref|YP_003811809.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           HdN1]
 gi|301797944|emb|CBL46166.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           HdN1]
          Length = 639

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 294/637 (46%), Positives = 413/637 (64%), Gaps = 27/637 (4%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD I+ P  ++ LS   L QLADE+R  ++++V KTGGH  S LGVIELT+ALH
Sbjct: 10  RPATPLLDQIDSPARLRALSEDSLPQLADEMRQYLLYSVGKTGGHFSSGLGVIELTIALH 69

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV+N P D+++WDVGHQ YPHK+LTGRR+ + ++RQ  GL+GF KR ES +D FG GHSS
Sbjct: 70  YVYNTPNDQLIWDVGHQAYPHKLLTGRREALLSIRQRHGLAGFPKRDESPFDAFGVGHSS 129

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGM++   ++ R++ VVA+IGDGA+TAG A+EA+N+AG+  S+M+V+LNDN  +
Sbjct: 130 TSISAALGMSIALAMQKREDQVVAIIGDGAITAGMAFEALNHAGHTHSNMLVVLNDN-DM 188

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYAR 310
           S+           VG LS   SR+ ++R    LRE  K V + +     ELA + +E+ +
Sbjct: 189 SISEN--------VGGLSHYFSRIWASRTYNSLREGGKKVLENL-PTARELAKRTEEHMK 239

Query: 311 GMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPY 370
           GM+  S  +LFE +G  YIGP+DGH++  L+  L  +K+   +GP L+H+ T+KG G+  
Sbjct: 240 GMV--SPGSLFEAVGFNYIGPIDGHDLPRLITHLNRIKD--LSGPQLLHIKTQKGHGFAP 295

Query: 371 AEKAADKYHGVAKFDPA-TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGG 429
           AE     +H ++K DP  T K   +      Y+  F + L   AE D  ++ I  AM  G
Sbjct: 296 AEHDPIGWHALSKIDPQNTLKSAPAKPSRPKYSDIFGQFLCDMAEHDPKLIGITPAMREG 355

Query: 430 TGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDL 489
           +G+  F RRFP++  DV IAEQHAVT AAG+ACEG+KP  AIYS+F+QRAYDQ++HDV L
Sbjct: 356 SGMVEFSRRFPSQYQDVAIAEQHAVTLAAGMACEGMKPVVAIYSTFLQRAYDQLIHDVAL 415

Query: 490 QKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDD 549
           Q L V F +DR+G+VG DGPTH G FD++F+ C+PN++VMAPSDE E   ++ T    + 
Sbjct: 416 QNLDVLFGIDRSGIVGEDGPTHAGVFDLSFLRCIPNLIVMAPSDENECRQLLYTGYNYNG 475

Query: 550 RPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
            P+  RYPRG G G  +      +P  +GKG I  EG+  A+L +G  + +C        
Sbjct: 476 -PAAVRYPRGTGPGTTIETTMTALP--IGKGAIRREGQHTAILCFGAPLTACRTV----- 527

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
           +  L  T+ D RF KPLD ALI  +A+ HE+L+TVEE +  GG GS + +FLA+ G++  
Sbjct: 528 AENLNATLVDMRFVKPLDEALILKMAEQHELLVTVEENTTRGGAGSAINEFLAEQGIVQP 587

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            +    L +PD++I+HG PA+ L + GL    I   +
Sbjct: 588 LLN---LGVPDQFIEHGKPAEMLKECGLDAEGIEKAI 621


>gi|390453367|ref|ZP_10238895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paenibacillus peoriae KCTC
           3763]
          Length = 632

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/627 (47%), Positives = 414/627 (66%), Gaps = 24/627 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  I  P  +K+LS+ +L  LA+E+R+ +I  +S TGGHL S+LGV+ELT+ALHY +N+
Sbjct: 2   LLPHIKQPGDLKSLSVEQLASLAEEIRSFLIEKLSVTGGHLASNLGVVELTIALHYCYNS 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD++++DVGHQ Y HKILTGR D+  T+RQ DGL GF KRSESE+D +  GHSSTS+SA
Sbjct: 62  PKDKMIYDVGHQAYVHKILTGRMDRFDTLRQRDGLCGFVKRSESEHDVWEAGHSSTSLSA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            +GMA+ RDLKG  N V+AVIGDGA+T G A+EA+N+ G+   +++VILNDN ++S+   
Sbjct: 122 AMGMALARDLKGEDNKVIAVIGDGALTGGMAFEALNHIGHERKNLMVILNDN-EMSIA-- 178

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKV-DEYARG 311
                 P VGA+ + LS+++S+R     ++  + + K+   IGG + + A +V D +   
Sbjct: 179 ------PNVGAMHNYLSKIRSDRHYLRAKDELEVLLKKIPAIGGKLAKSAGRVKDSFKYM 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+ G    LFEELGL Y+GPVDGH++  L+   ++  N   TGPVL+HVVT KG+GY  A
Sbjct: 233 MVPG---VLFEELGLTYLGPVDGHDLPKLIETFQQADN--VTGPVLVHVVTTKGKGYKPA 287

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E  + K+HG++ +   +G+  K+      YT  F   LI  AE D+ ++A+  AM GG+G
Sbjct: 288 EADSHKWHGISPYKIESGQVLKAVGNPM-YTEIFGRTLIELAEQDERIIAVTPAMPGGSG 346

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F   F TR  DVGIAEQHA T  A LA EGLKP  A+YS+FMQRAYDQ+VHD+    
Sbjct: 347 LVPFSEEFSTRMIDVGIAEQHAATMCAALAMEGLKPIFAVYSTFMQRAYDQIVHDICRHN 406

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
             V FA+DRAG VGADG TH G FDV F+  +PN+V+M P DE EL HM+ TA   DD P
Sbjct: 407 ANVMFAIDRAGFVGADGETHHGVFDVAFLRHIPNLVLMMPKDENELRHMMKTALDYDDGP 466

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             +RYPR N +GV L    K IP  +G   +L +GE  A++  G  +Q    A+  ++  
Sbjct: 467 IAYRYPRVNVVGVPLDSELKAIP--IGSWELLRKGEGYAVIASGPMLQVAAEAAEAMKRE 524

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTV 670
           GL+++V +ARF KP+D  ++R LA+ H  LI +EE S  G  GS V++F A + +L+  V
Sbjct: 525 GLQVSVVNARFLKPVDEEMLRELARQHTKLIVLEEASEAGSLGSAVLEFYANEEILNAQV 584

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLT 697
             R + +PDR+++HGS  +Q A+ GLT
Sbjct: 585 --RLMGIPDRFVEHGSIKEQRAEVGLT 609


>gi|260887336|ref|ZP_05898599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
 gi|260862972|gb|EEX77472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
          Length = 634

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/644 (47%), Positives = 406/644 (63%), Gaps = 25/644 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ IN P  +K+ ++ EL QLA ELR  +I  VS+TGGHL  SLG +ELT+ALH  F+ 
Sbjct: 6   LLERINEPHALKSCTLDELSQLARELRRYIIETVSQTGGHLAPSLGTVELTLALHRAFDC 65

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HKILTGRR+    +RQ  G++GF KR ES YD FGTGHSSTSISA
Sbjct: 66  PEDKIVWDVGHQAYAHKILTGRREAFVGLRQKGGITGFPKREESVYDAFGTGHSSTSISA 125

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA  RD+ G +  + AVIGDGA+T G+A+E +NNAG L  D+IVILNDN     P  
Sbjct: 126 ALGMAAARDIAGEQYRIAAVIGDGALTGGEAFEGLNNAGTLGKDIIVILNDNGMSIAPN- 184

Query: 256 TLDGPIPPVGALSSALSRLQS----NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
                   VGA+S  LSR +     +R  ++++   K +   IG  ++  A  + +  R 
Sbjct: 185 --------VGAMSEYLSRFRVAPGYHRAKQDIKNFLKSIP-HIGERVYRTAEHIKDGVRS 235

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +   G  LF ++G +YIGP+DGHN+  L+ + E+ K  K  GP+LIHV T KG+GY  A
Sbjct: 236 ALVPGG--LFTDMGFHYIGPLDGHNIALLLDVFEQAKQLK--GPLLIHVETCKGKGYAPA 291

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EKA DK+HG+ +FD A G   K +    +YT+ F +AL+  AE D DVVAI AAM  GTG
Sbjct: 292 EKAPDKFHGIGRFDVADGTTLKKAGAKPTYTSVFGKALLEAAEEDADVVAITAAMPDGTG 351

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F  ++PTR FDVGIAEQHA TFAAGLA  G KP  A+YS+F QRAYDQ++HDV LQ 
Sbjct: 352 LRTFGEKYPTRFFDVGIAEQHATTFAAGLAAAGRKPVLALYSTFAQRAYDQILHDVCLQN 411

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           L V FA+DRAG VG DG TH G FD +++  LPNM V+AP DE EL  M+ TA +++  P
Sbjct: 412 LHVVFALDRAGFVGEDGATHHGVFDYSYLRHLPNMKVLAPKDENELGRMLKTALSLEG-P 470

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG GIG  L       PLE     +L E   +ALL  G+ V +    + LL+ +
Sbjct: 471 VALRYPRGEGIGAALE--EPFTPLESLAAEVLEEEGEIALLAVGSMVDAAQKTAKLLKED 528

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           GL   V + R  KPLD  L+  +A   ++L+T+EE ++ GGFGS V++ LA  GLL   V
Sbjct: 529 GLSAAVVNMRTVKPLDEELLHRMAHEKKMLVTMEENALAGGFGSAVLEALADAGLLIPVV 588

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           ++    + D +I+ G P + L  AGL P  +A ++       R+
Sbjct: 589 RFG---IGDAFIEQGKPQELLEMAGLQPEQMARSILTAWKGARD 629


>gi|331006554|ref|ZP_08329846.1| 1-deoxy-D-xylulose 5-phosphate synthase [gamma proteobacterium
           IMCC1989]
 gi|330419623|gb|EGG93997.1| 1-deoxy-D-xylulose 5-phosphate synthase [gamma proteobacterium
           IMCC1989]
          Length = 658

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 295/650 (45%), Positives = 413/650 (63%), Gaps = 39/650 (6%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLD +N P  ++ L   +L  +A ++R  +++ V +TGGH G+ LGV+ELT+ALH
Sbjct: 25  RPDTPLLDAVNSPEDLRQLDPEDLSLIAQQIREYLLYCVGQTGGHFGAGLGVVELTIALH 84

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           YV+N P DR++WDVGHQTYPHKILTGRR++M TMRQ  GLSGF KRSES+YD FG GHSS
Sbjct: 85  YVYNTPNDRLVWDVGHQTYPHKILTGRREQMLTMRQYQGLSGFPKRSESDYDTFGVGHSS 144

Query: 191 TSISAGLGMAVGRDLKGRKNNV--------VAVIGDGAMTAGQAYEAMNNAGYLDSDMIV 242
           TSISA LGMA+G ++    NN         VA+IGDG+MTAG A+EA+N++ +  +D++V
Sbjct: 145 TSISAALGMAIGSEMSSGINNDQDSQARKHVAIIGDGSMTAGMAFEALNHSAHTGNDLLV 204

Query: 243 ILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELA 302
           ILNDN     P          VG L++  S++ +++    LRE +K V  ++     E+A
Sbjct: 205 ILNDNNMSISPN---------VGGLATYFSKIWASKSYNALRENSKRVLTKLPRAW-EMA 254

Query: 303 AKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVT 362
            + +E+ +G++  S  TLFEE+G  Y+GP+DGH++ +L+   E++K  K  GP L+H++T
Sbjct: 255 RRTEEHMKGLV--SPGTLFEEMGFNYVGPIDGHDLPELINYFEKLKAIK--GPKLLHIIT 310

Query: 363 EKGRGYPYAEKAADKYHGVAKFDPATGK--QFKSSARTQSYTTYFAEALIAEAEVDKDVV 420
            KG+G+  AE     YH + K +P        K+    + Y   F + L   A   + +V
Sbjct: 311 RKGKGFSPAEADPVGYHALNKIEPKVNNAPTVKAVTTAKKYQDVFGQWLCDMATASEKLV 370

Query: 421 AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY 480
            I  AM  G+G+  F  +FP R +DV IAEQHAVT AAG+ACEG KP  AIYS+F+QR Y
Sbjct: 371 GITPAMCEGSGMVAFSEQFPERYYDVAIAEQHAVTLAAGIACEGQKPVVAIYSTFLQRGY 430

Query: 481 DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHM 540
           DQ+VHDV LQ L V F +DRAG+VG DGPTH GSFD++++ C+PNM++ APSDE E + +
Sbjct: 431 DQLVHDVALQNLDVTFGIDRAGIVGEDGPTHAGSFDLSYLRCIPNMIIAAPSDENECYQL 490

Query: 541 VATAAAIDDRPSCFRYPRGNGIGVELPP----GNKGIPLEVGKGRILIEGERVALLGYGT 596
           +++A      P+  RYPRG GIG  +       N      VGK R + EG  VA+L +GT
Sbjct: 491 LSSAYH-HVGPAAVRYPRGKGIGTSISSVASIANND-DFTVGKARKISEGSNVAILNFGT 548

Query: 597 AVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSH 655
            +   + A+A L++     TV D R+ KPLDH  I+ LA+SH +L+T+EE +I GG GS 
Sbjct: 549 LLPFAIEAAATLKA-----TVYDMRWAKPLDHEAIKQLAQSHRLLVTLEENAIAGGAGSG 603

Query: 656 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           V +++AQ GL    +   P+ LPD +IDHG     L   GL+   I   +
Sbjct: 604 VCEYIAQQGLPTAVL---PMGLPDTFIDHGKREKILEGIGLSAEGIIGAI 650


>gi|402833940|ref|ZP_10882547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. CM52]
 gi|402279009|gb|EJU28052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. CM52]
          Length = 632

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/644 (47%), Positives = 405/644 (62%), Gaps = 25/644 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ IN P  +K+ ++ EL QLA ELR  +I  VSKTGGHL  SLG +ELT+ALH  F+ 
Sbjct: 4   LLERINEPHALKSCTLDELSQLARELRRYIIDTVSKTGGHLAPSLGTVELTLALHRAFDC 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HKILTGRR+    +RQ  G++GF KR ES YD FGTGHSSTSISA
Sbjct: 64  PEDKIVWDVGHQAYAHKILTGRREAFAGLRQKGGITGFPKREESVYDAFGTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA  RD+ G    + AVIGDGA+T G+A+E +NNAG L  D+IVILNDN     P  
Sbjct: 124 ALGMAAARDIAGEHYRIAAVIGDGALTGGEAFEGLNNAGTLGKDIIVILNDNGMSIAPN- 182

Query: 256 TLDGPIPPVGALSSALSRLQS----NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
                   VGA+S  LSR +     +R  ++++   K +   IG  ++  A  + +  R 
Sbjct: 183 --------VGAMSEYLSRFRVAPGYHRAKQDIKNFLKSIP-HIGERVYRTAEHIKDGVRS 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +   G  LF ++G +YIGP+DGHN+  L+ + E+ K  K  GP+LIHV T KG+GY  A
Sbjct: 234 ALVPGG--LFTDMGFHYIGPLDGHNIALLLDVFEQAKQLK--GPLLIHVETCKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EKA DK+HG+ +FD A G   K +    +YT+ F +AL+  AE D DVVAI AAM  GTG
Sbjct: 290 EKAPDKFHGIGRFDVADGTTLKKAGAKPTYTSVFGKALLEAAEEDADVVAITAAMPDGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F  ++PTR FDVGIAEQHA TFAAGLA  G KP  A+YS+F QRAYDQ++HDV LQ 
Sbjct: 350 LRAFGEKYPTRFFDVGIAEQHATTFAAGLAAAGRKPVLALYSTFAQRAYDQILHDVCLQN 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           L V FA+DRAG VG DG TH G FD +++  LPNM V+AP DE EL  M+ TA +++  P
Sbjct: 410 LHVVFALDRAGFVGEDGATHHGVFDYSYLRHLPNMKVLAPKDENELGRMLKTALSLEG-P 468

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG G+G  L       PLE     +L E   +ALL  G+ V +    + LL+  
Sbjct: 469 VALRYPRGEGLGTALE--EPFTPLESLAAEVLEEEGEIALLAVGSMVDAAQKTAKLLKEE 526

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           GL   V + R  KPLD  L+  +A   ++L+T+EE ++ GGFGS V++ LA  GLL   V
Sbjct: 527 GLSAAVVNMRTVKPLDEELLHRMAHEKKMLVTMEENALAGGFGSAVLEALADAGLLVPVV 586

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           ++    + D +I+ G P + L  AGL P  +A ++  +    R+
Sbjct: 587 RFG---IGDAFIEQGKPQELLEMAGLQPEQMARSILTVWKGARD 627


>gi|421484056|ref|ZP_15931628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii
           HLE]
 gi|400197763|gb|EJO30727.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii
           HLE]
          Length = 620

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 324/634 (51%), Positives = 419/634 (66%), Gaps = 27/634 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T LLD I  P  +K L  RELK+LADELR  V+ +VSKTGGHL S+LG +ELT+ALH VF
Sbjct: 3   TDLLDRIQSPADLKRLDRRELKKLADELRGFVLESVSKTGGHLSSNLGTVELTLALHQVF 62

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           + P DRI+WDVGHQ+YPHKILTGRR  M  +RQ  G+SGF KRSESEYD FGT HSSTSI
Sbjct: 63  DTPHDRIVWDVGHQSYPHKILTGRRAGMARLRQEGGISGFPKRSESEYDAFGTAHSSTSI 122

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSL 252
           SA LGMAV     G +   +AVIGDGAM+AG A+EAMNNAG   + +++VILNDN  +S+
Sbjct: 123 SAALGMAVASRNAGVQRQHIAVIGDGAMSAGMAFEAMNNAGVTPNINLLVILNDN-DMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM 312
                    PPVGAL+  L+RL S R     + V + V + +  P+ ELA + +E+A+GM
Sbjct: 182 S--------PPVGALNRYLARLMSGRFYAAAKNVGRAVLQHV-PPVLELARRFEEHAKGM 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  + +TLFEE G  Y+GP+DGH++D LV  L+ +K  +  G   +HVVT+KG+GY  AE
Sbjct: 233 V--TPATLFEEFGFNYVGPIDGHDLDALVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
                YHG  KFDPA G Q   +   +++T  F   L   AE D  +VA+  AM  G+GL
Sbjct: 289 ADPVLYHGPGKFDPAVGIQQSKAPGKRTFTQVFGHWLCDMAEQDPRLVAVTPAMREGSGL 348

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +RFP R FDVGIAEQHAVTFAAG+ACEG KP  AIYS+FMQR YDQ +HDV LQ L
Sbjct: 349 VEFEKRFPLRYFDVGIAEQHAVTFAAGIACEGQKPVVAIYSTFMQRGYDQFIHDVALQNL 408

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DRAG+VGADG TH G++D  F+ C+PNMVV  PSDE+E   +++T       P+
Sbjct: 409 DVTFALDRAGIVGADGATHAGNYDTAFLRCVPNMVVATPSDESETRLLLSTCYQYPG-PA 467

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G G     G   +  EVG+G +  EG+++A+LG+GT V + LAA+  L++  
Sbjct: 468 SVRYPRGAGCGAAEGAGLDTV--EVGRGVVRREGKKIAILGFGTLVPAALAAADKLDA-- 523

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
              TVAD RF KP+D  LI  LA  H+ L+T+E+ SI GG GS V++ L+  G+    + 
Sbjct: 524 ---TVADMRFVKPIDRELILDLAARHDALVTLEDASIMGGAGSAVLETLSAAGV---QIP 577

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
              L LPD +IDHG  +  LA  GL  + I  ++
Sbjct: 578 VLQLGLPDAFIDHGDQSALLAGIGLDAAGIERSI 611


>gi|298245142|ref|ZP_06968948.1| deoxyxylulose-5-phosphate synthase [Ktedonobacter racemifer DSM
           44963]
 gi|297552623|gb|EFH86488.1| deoxyxylulose-5-phosphate synthase [Ktedonobacter racemifer DSM
           44963]
          Length = 645

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 304/659 (46%), Positives = 419/659 (63%), Gaps = 32/659 (4%)

Query: 74  TPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVF 133
           T +LDTI+ P  ++ L++ +++QLA E+R ++I  VS  GGH+  +LGV+ELT+ALH VF
Sbjct: 2   TSILDTIDSPEQLRALTVPQMEQLAGEIRKEIIEKVSVRGGHIAPNLGVVELTMALHRVF 61

Query: 134 NAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSI 193
           N P D ++WD+GHQ Y HK+LTGRR++ HT+RQ  GLSG+ +R ES YD FG  H+STSI
Sbjct: 62  NTPNDLLVWDIGHQAYVHKLLTGRRERFHTIRQFGGLSGYLRRDESPYDTFGASHASTSI 121

Query: 194 SAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDN-KQVSL 252
           SA LGMA  RDLKG    VVA+IGDGA+T G A EA+NNAG +  ++I++LNDN K +S 
Sbjct: 122 SAALGMAAARDLKGEDTKVVAIIGDGALTGGMALEAINNAGSMKKNLIIVLNDNDKSIS- 180

Query: 253 PTATLDGPIPPVGALSSALS---RLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKVD 306
                      VGAL   LS   ++Q+    + LR++AKG  ++   +G    E A + +
Sbjct: 181 ---------DNVGALHQYLSQVRKVQTTPSYQRLRDMAKGSIERFPVLGDKAREAAGRAE 231

Query: 307 EYARGMISGSGS-TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
              +  +  S S  +FEELG+ + GP DGH++  ++ + E VK+ +  GPV++ VVT+KG
Sbjct: 232 TSFKQFVMHSKSGAIFEELGIKFFGPFDGHDIPSMLDVFENVKHIE--GPVMVQVVTKKG 289

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE  + K+HG   +D  TG   K++    +YT  FA  L+  AE D  VV I AA
Sbjct: 290 KGWEVAESDSTKWHGPGAYDYKTGIIKKNAGDPPTYTEVFANTLVEIAEKDPSVVGITAA 349

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           M  GTGL    +RFP R FDVGIAEQHAVTFAAG+A  G+KP  AIYS+FMQRA+DQV+H
Sbjct: 350 MAEGTGLKKMHQRFPERYFDVGIAEQHAVTFAAGMATLGIKPVIAIYSTFMQRAFDQVMH 409

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV +Q L V FAMDRAG+VG DG T  G FD  FM  LP+M VMAP DE EL HM+ TA 
Sbjct: 410 DVCVQDLHVVFAMDRAGIVGEDGQTQHGVFDTAFMRILPHMKVMAPKDEEELRHMLYTAV 469

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI-----EGERV--ALLGYGTAV 598
            +D  P   RYPRG  +G+E+   ++   LEVGK  +L      E ER   A+L YG+ V
Sbjct: 470 YLDG-PVALRYPRGKALGIEM--SDELHMLEVGKAELLSPATLEEAERTDCAILAYGSTV 526

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVV 657
                A+  L   G++ T+ +AR+ KPLD  L   LAK+   ++T+E+  + GGFGS V+
Sbjct: 527 AQAEIAAKELAQEGIKATIVNARWAKPLDEELFLHLAKTTRRIVTIEDHVLAGGFGSAVL 586

Query: 658 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 716
           +   Q GLL   ++ R + LPD+Y++HG+P       GL+ +H+   V  +LG  +  L
Sbjct: 587 ELFEQHGLLR-DIETRLIALPDKYVEHGAPTILKELYGLSSAHLKEVVREMLGTQQHTL 644


>gi|270263553|ref|ZP_06191822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13]
 gi|421781970|ref|ZP_16218430.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia plymuthica A30]
 gi|270042437|gb|EFA15532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13]
 gi|407755844|gb|EKF65967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia plymuthica A30]
          Length = 621

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 309/638 (48%), Positives = 406/638 (63%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P L  +  P  +++L    L +L DELR  ++ +VS++ GH  S LG +ELTVALHYV+N
Sbjct: 9   PTLALVENPDELRSLPKESLPKLCDELRQYLLDSVSRSSGHFASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D ++WDVGHQ YPHKILTGRRD++ T+RQ DGL  F  R+ESEYD    GHSSTSIS
Sbjct: 69  TPFDHLVWDVGHQAYPHKILTGRRDRISTIRQKDGLHPFPWRAESEYDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMAV  + +G+    V VIGDGA+TAG A+EAMN+AG ++ DM+V+LNDN ++S+  
Sbjct: 129 AGLGMAVAAEREGKNRRTVCVIGDGAITAGMAFEAMNHAGDINPDMLVVLNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L++L S +    LRE  K V   +  P+ EL  + +E+ +GM+ 
Sbjct: 188 N--------VGALNNHLAQLLSGKLYSTLREGGKRVLSGLP-PIKELVKRTEEHLKGMVV 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEELG  YIGPVDGH+V  LVA L+ +++ K  GP L+H++T+KGRGY  AEK 
Sbjct: 239 PG--TLFEELGFNYIGPVDGHDVQGLVATLKNMRDLK--GPQLLHIMTKKGRGYAPAEKD 294

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +H V KFDPA+G   KS+    SY+  F + L   A  D  ++AI  AM  G+G+  
Sbjct: 295 PISFHAVPKFDPASGTLPKSAGGQPSYSKIFGDWLCETAAKDSSLMAITPAMREGSGMVQ 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F R +P + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HDV +QKLPV
Sbjct: 355 FSRDYPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQKLPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DR G+VGADG TH G+FD++FM C+P MV+M PSDE E   M+ T    ++ PS  
Sbjct: 415 MFAIDRGGIVGADGQTHQGAFDLSFMRCIPTMVIMTPSDENECRQMLYTGYHYNEGPSAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGNG G +L P      L +GKG +  EGE+VA+L +GT     L   A   +  L 
Sbjct: 475 RYPRGNGTGAQLEPLGA---LPIGKGVVRREGEKVAILNFGT-----LLPEAAQVAEALN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD  L+  LA SHEVL+T+EE +I GG GS V + L         V   
Sbjct: 527 ATLVDMRFVKPLDEQLVLELAASHEVLVTLEENAIMGGAGSGVNELLMAK---RRAVPVL 583

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            + LPD ++  GS  +     GL  + I   +   L Q
Sbjct: 584 NIGLPDSFVSQGSQEEVRVDLGLDAAGIRRQIEAWLAQ 621


>gi|337288951|ref|YP_004628423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermodesulfobacterium sp.
           OPB45]
 gi|334902689|gb|AEH23495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermodesulfobacterium
           geofontis OPF15]
          Length = 621

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 308/638 (48%), Positives = 402/638 (63%), Gaps = 25/638 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
            L  IN P  +K L I  LK LA+E+R+ +I  VSK GGHL  +LGV+ELT+ALHYVFN+
Sbjct: 3   FLKMINSPEDLKKLKISHLKALAEEIRSYIIEVVSKNGGHLAPNLGVVELTLALHYVFNS 62

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD+I+WDVGHQ Y HKI+TGRRD+  T+R+ +GL+GF KRSES +D   TGHSSTSISA
Sbjct: 63  PKDKIIWDVGHQCYTHKIITGRRDQFPTLRKYNGLAGFPKRSESPHDILDTGHSSTSISA 122

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+     +KG +  V+AVIGDG++TAG A+E +NNAGY   D+IVILNDN+    P+ 
Sbjct: 123 ALGLVTALRMKGEEGKVIAVIGDGSITAGLAFEGLNNAGYRKEDLIVILNDNEMCISPS- 181

Query: 256 TLDGPIPPVGALSSALS-RLQSNRPLRELREVAKGVTKQIGGP--MHELAAKVDEYARGM 312
                   VGALSS +S RL  N      RE+ K   K  GG   +  L    D +   +
Sbjct: 182 --------VGALSSFVSKRLTGNLARFIKREIEKMAHKFPGGESVISLLKKGEDIFKMAI 233

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
             G+   LF  L   YIGPVDGH+++ L+ ILE +K  K  GP+L HV+T+KG+GYPYAE
Sbjct: 234 TPGA---LFTALNFEYIGPVDGHDLETLIEILENIKRMK--GPILFHVITKKGKGYPYAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           K  + +HGV  F+  TGK  KS     SYT  F + ++  AE++  +VAI AAM  GTGL
Sbjct: 289 KDPEIFHGVGPFEIKTGKILKSD-EAPSYTEVFGKTILRLAEMEPKIVAITAAMRLGTGL 347

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F  ++P R FDVGI EQHAVTFA GLA  G  P CAIYS+F+QRAYDQ++HDV L  +
Sbjct: 348 KAFSEKYPDRFFDVGICEQHAVTFATGLALGGYIPICAIYSTFLQRAYDQIIHDVALNNV 407

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
            V FA+DR GLVG DGPTH GSFD++++  +PN+ +MAP DE EL HM+ +A      P 
Sbjct: 408 KVIFAIDRGGLVGEDGPTHHGSFDLSYLRLIPNLTIMAPKDENELQHMLYSALKYPG-PV 466

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPR  G GVEL    K IPL  GK  ++ +G+ + ++  G  V   L A+  LE   
Sbjct: 467 AIRYPRSAGEGVELDWEFKEIPL--GKAELIKDGKDLTIIAIGNLVYQALKAAEDLEKEN 524

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVK 671
           + + V +ARF KPLD  LI   AK    +IT+EE + IGGFGS V + LA   +    VK
Sbjct: 525 ISIAVINARFIKPLDEDLILDFAKKTGKIITIEENTLIGGFGSAVCELLADRNI---PVK 581

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            + + LPD++I+HG       + GLT   +      +L
Sbjct: 582 IKRIGLPDKFIEHGDLKTLKRKYGLTSETLKKIALELL 619


>gi|419801539|ref|ZP_14326763.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           HK262]
 gi|419844646|ref|ZP_14367933.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           HK2019]
 gi|385193455|gb|EIF40817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           HK262]
 gi|386416572|gb|EIJ31064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           HK2019]
          Length = 617

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/633 (47%), Positives = 413/633 (65%), Gaps = 26/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR+ ++ +VS+T GHL S LG +ELTVALHY+F 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRSYLLESVSQTSGHLASGLGTVELTVALHYIFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ  G+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G+I 
Sbjct: 184 N--------VGALNNHLARIFSGSLYSTVRDGSKKILDKV-PTVKNFMKKTEEHMKGVIF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+L+A L  +++ K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPIDGHNIDELIATLSNMRDLK--GPQFLHIKTKKGKGYEPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  KS+A+  +Y+  F + L   AE D  +V I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPISGQLPKSNAKP-TYSKIFGDWLCEMAEQDDKLVGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSERFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYKC-GKPAAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P  +   LE+G+ +++ +GE+VA+L +GT     L  +AL  +  L 
Sbjct: 471 RYPRGNAIGVELTPLAE---LEIGRSKMVRQGEKVAILNFGT-----LLPAALSVAEKLN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D A I  +A +H+V++T+EE +I GG GS V + L   G    T    
Sbjct: 523 ATVVDMRFVKPIDEARILEMADTHDVIVTLEENAIHGGAGSAVSEVLNSHG---KTTALL 579

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
            L LPD +I  G+  + LA+  L    I   + 
Sbjct: 580 QLGLPDFFIPQGTQQEALAEIQLDEKGIEEQII 612


>gi|330838911|ref|YP_004413491.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
 gi|329746675|gb|AEC00032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
          Length = 632

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/644 (47%), Positives = 406/644 (63%), Gaps = 25/644 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+ IN P  +K+ ++ EL QLA ELR  +I  VS+TGGHL  SLG +ELT+ALH  F+ 
Sbjct: 4   LLERINEPHALKSCTLDELSQLARELRRYIIETVSQTGGHLAPSLGTVELTLALHRAFDC 63

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HKILTGRR+    +RQ  G++GF KR ES YD FGTGHSSTSISA
Sbjct: 64  PEDKIVWDVGHQAYAHKILTGRREAFVGLRQKGGITGFPKREESVYDAFGTGHSSTSISA 123

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMA  RD+ G +  + AVIGDGA+T G+A+E +NNAG L  D+IVILNDN     P  
Sbjct: 124 ALGMAAARDIAGEQYRIAAVIGDGALTGGEAFEGLNNAGTLGKDIIVILNDNGMSIAPN- 182

Query: 256 TLDGPIPPVGALSSALSRLQS----NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG 311
                   VGA+S  LSR +     +R  ++++   K +   IG  ++  A  + +  R 
Sbjct: 183 --------VGAMSEYLSRFRVAPGYHRAKQDIKNFLKSIP-HIGERVYRTAEHIKDGVRS 233

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +   G  LF ++G +YIGP+DGHN+  L+ + E+ K  K  GP+LIHV T KG+GY  A
Sbjct: 234 ALVPGG--LFTDMGFHYIGPLDGHNIALLLDVFEQAKQLK--GPLLIHVETCKGKGYAPA 289

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           EKA DK+HG+ +FD A G   K +    +YT+ F +AL+  AE D DVVAI AAM  GTG
Sbjct: 290 EKAPDKFHGIGRFDVADGTTLKKAGAKPTYTSVFGKALLEAAEEDADVVAITAAMPDGTG 349

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F  ++PTR FDVGIAEQHA TFAAGLA  G KP  A+YS+F QRAYDQ++HDV LQ 
Sbjct: 350 LRTFGEKYPTRFFDVGIAEQHATTFAAGLAAAGRKPVLALYSTFAQRAYDQILHDVCLQN 409

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
           L V FA+DRAG VG DG TH G FD +++  LPNM V+AP DE EL  M+ TA +++  P
Sbjct: 410 LHVVFALDRAGFVGEDGATHHGVFDYSYLRHLPNMKVLAPKDENELGRMLKTALSLEG-P 468

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
              RYPRG GIG  L       PLE     +L E   +ALL  G+ V +    + LL+ +
Sbjct: 469 VALRYPRGEGIGAALE--EPFTPLESLAAEVLEEEGEIALLAVGSMVDAAQKTAKLLKED 526

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTV 670
           GL   V + R  KPLD  L+  +A   ++L+T+EE ++ GGFGS V++ LA  GLL   V
Sbjct: 527 GLSAAVVNMRTVKPLDEELLHRMAHEKKMLVTMEENALAGGFGSAVLEALADAGLLIPVV 586

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 714
           ++    + D +I+ G P + L  AGL P  +A ++       R+
Sbjct: 587 RFG---IGDAFIEQGKPQELLEMAGLQPEQMARSILTAWKGARD 627


>gi|359436810|ref|ZP_09226892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20311]
 gi|359446264|ref|ZP_09235960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20439]
 gi|358028506|dbj|GAA63141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20311]
 gi|358039947|dbj|GAA72209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas sp.
           BSi20439]
          Length = 620

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/633 (47%), Positives = 413/633 (65%), Gaps = 28/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ +N P H+++L+  +L   + ELR  ++ +VS++ GHL S LG +ELTVALHYV+N
Sbjct: 9   PLLNLVNEPAHLRDLAQDKLPAFSHELRDYLLNSVSQSSGHLASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD+MHT+RQ DGL  F  R ESEYD F  GHSSTSIS
Sbjct: 69  TPDDRLVWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPFRDESEYDTFSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGM++    +G+    VAVIGDGA+TAG A+EAMN+ G + SDM++ILNDN ++S+  
Sbjct: 129 AALGMSIAAQKEGKGRKTVAVIGDGAITAGMAFEAMNHLGDVKSDMLIILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG-MI 313
                    VGAL++  +R+ S      +RE +K +   +  P+ ELA++++E+ +G MI
Sbjct: 188 N--------VGALTNHFARILSGSFYTNIREGSKKLLSGV-PPVKELASRMEEHIKGMMI 238

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G   T FEELGL YIGP+DGH+V+ LV  L  ++N K  GP L+H+ T+KG+GY  AE 
Sbjct: 239 PG---TFFEELGLNYIGPIDGHDVNMLVDTLRNMRNLK--GPQLLHIKTQKGKGYKPAEA 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV KFDPAT    KS     ++++ F + L   AE D  ++AI  AM  G+G+ 
Sbjct: 294 DPIGYHGVPKFDPATSSLPKSKPGAATFSSVFGDWLCDMAEQDNKLMAITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P + FDV IAEQHAVT AAG ACEGLKP  AIYSSF+QRAYDQ++HDV LQ LP
Sbjct: 354 RFSKEHPEQYFDVAIAEQHAVTLAAGFACEGLKPVVAIYSSFLQRAYDQLIHDVALQNLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAG+VGADG TH G++D++FM C+PNMV+MAPSD  E   M+ T     D P  
Sbjct: 414 VLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMAPSDTNECRQMLYTGYQA-DCPVA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+    ++    +   LE+GK  ++ +G +VA+L +GT     L  +A L ++ L
Sbjct: 473 VRYPRGSAGTADIQSAMQ--QLEIGKANVIKQGTKVAILSFGT-----LLENAQLATDEL 525

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             T+ + RF KPLD  LI  L  +H++++T+E+ +I GG GS V ++LA        VK 
Sbjct: 526 NATLVNMRFIKPLDTGLIDELVANHDIIVTLEDNAISGGAGSAVNEYLATQ---KAAVKI 582

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             L +PD +I HG+      + GL    I  T+
Sbjct: 583 LNLGIPDEFIKHGTQQQMHDEMGLGGQGILTTI 615


>gi|392556151|ref|ZP_10303288.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas undina
           NCIMB 2128]
          Length = 620

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 301/624 (48%), Positives = 409/624 (65%), Gaps = 28/624 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL+ +N P H+++L+  +L   + ELR  ++ +VS++ GHL S LG +ELTVALHYV+N
Sbjct: 9   PLLNLVNEPAHLRDLAQDKLPAFSHELRDYLLNSVSQSSGHLASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD+MHT+RQ DGL  F  R ESEYD F  GHSSTSIS
Sbjct: 69  TPDDRLVWDVGHQAYPHKILTGRRDQMHTIRQKDGLHPFPFRDESEYDTFSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGM++    +G+    VAVIGDGA+TAG A+EAMN+ G + SDM++ILNDN ++S+  
Sbjct: 129 AALGMSIAAQKEGKGRKTVAVIGDGAITAGMAFEAMNHLGDVKSDMLIILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARG-MI 313
                    VGAL++  +R+ S      +RE +K +   +  P+ ELA++++E+ +G MI
Sbjct: 188 N--------VGALTNHFARILSGSFYTNIREGSKKLLSGV-PPVKELASRMEEHIKGMMI 238

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
            G   T FEELGL YIGP+DGH+V+ LV  L  ++N K  GP L+H+ T+KG+GY  AE 
Sbjct: 239 PG---TFFEELGLNYIGPIDGHDVNMLVDTLRNMRNLK--GPQLLHIKTQKGKGYKPAEA 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               YHGV KFDPAT    KS     +++  F + L   AE D  ++AI  AM  G+G+ 
Sbjct: 294 DPIGYHGVPKFDPATSSLPKSKPSAATFSNVFGDWLCDMAEQDSKLMAITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +  P + FDV IAEQHAVT AAG ACEGLKP  AIYSSF+QRAYDQ++HDV LQ LP
Sbjct: 354 RFSKEHPEQYFDVAIAEQHAVTLAAGFACEGLKPVVAIYSSFLQRAYDQLIHDVALQNLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAG+VGADG TH G++D++FM C+PNMV+MAPSD  E   M+ T     + P  
Sbjct: 414 VLFAIDRAGIVGADGETHQGAYDLSFMRCIPNMVIMAPSDTNECRQMLYTGYQA-NCPVA 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+    E+    +   LE+GK  ++ +G +VA+L +GT     L  +A L ++ L
Sbjct: 473 VRYPRGSAGTAEIQSAMQ--QLEIGKANVIKQGAKVAILSFGT-----LLENAQLATDEL 525

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             T+ + RF KPLD  LI  L  +H++++T+E+ +I GG GS V ++LA        VK 
Sbjct: 526 NATLVNMRFIKPLDTGLIDELVANHDIIVTLEDNAISGGAGSAVNEYLATQ---KAAVKI 582

Query: 673 RPLVLPDRYIDHGSPADQLAQAGL 696
             L +PD +I HG+      + GL
Sbjct: 583 LNLGIPDEFIKHGTQQQMHDEMGL 606


>gi|269965071|ref|ZP_06179236.1| 1-deoxyxylulose-5-phosphate synthase [Vibrio alginolyticus 40B]
 gi|269830374|gb|EEZ84599.1| 1-deoxyxylulose-5-phosphate synthase [Vibrio alginolyticus 40B]
          Length = 621

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 304/638 (47%), Positives = 412/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P L   N P  ++ L    L  L DELR  ++ +VS++ GHL S LG +ELTVALHYV+N
Sbjct: 9   PTLALANTPEELRLLPKETLPNLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRDKM T+RQ DGL  F  R ESEYD    GHSSTSIS
Sbjct: 69  TPIDKLIWDVGHQAYPHKILTGRRDKMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMA+    +G+   +V+VIGDGA+TAG A+EAMN+AG +  DM+VILNDN ++S+  
Sbjct: 129 AGLGMAISAQKEGKGRKIVSVIGDGAITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+++ S      +RE  K V   +  P+ EL  + +E+ +GM+ 
Sbjct: 188 N--------VGALNNHLAKVLSGSLYTSIREGGKKVLSGV-PPIKELVRRTEEHLKGMV- 237

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEE G  YIGP+DGH+V++LV  L+ ++  K  GP  +H++T+KG+GY  AEK 
Sbjct: 238 -VPGTLFEEFGFNYIGPIDGHDVNELVKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKD 294

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP      KSS    +Y+  F + L   A  D  ++AI  AM  G+G+  
Sbjct: 295 PIGYHGVPKFDPTHNCLPKSSGGKPTYSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVR 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P + FDV IAEQHAVT A G+A  G  P  AIYS+F+QR YDQ++HD+ +  LPV
Sbjct: 355 FSKEYPDQYFDVAIAEQHAVTLATGMAIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G+FD++FM C+PNMV+MAPSDE E   M+ T       PS  
Sbjct: 415 MFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HSGPSAV 473

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+G+GVE+    +   LE+GKGR++ +GE+VA+L +GT + + L A+  L +    
Sbjct: 474 RYPRGSGMGVEIE--TEFTALEIGKGRMVRQGEKVAILNFGTFLGNALEAAEYLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVAD RF KPLD ALIR LA  H+VL+T+EE  I GG G+ VV+F+ +D ++   +   
Sbjct: 528 -TVADMRFVKPLDEALIRQLAADHDVLVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I  G+  +   + GL    I  ++ + L +
Sbjct: 585 -LGLPDEFIHQGTQDELHEELGLDAKGIEKSILDYLAK 621


>gi|189425294|ref|YP_001952471.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter lovleyi SZ]
 gi|189421553|gb|ACD95951.1| deoxyxylulose-5-phosphate synthase [Geobacter lovleyi SZ]
          Length = 622

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 306/634 (48%), Positives = 407/634 (64%), Gaps = 23/634 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL+TI  P  +K L+  +L  LA+E+R+ ++  VS+TGGHLGS+LG +EL++ALHY F+ 
Sbjct: 2   LLETIQNPADLKKLTPEQLPDLAEEIRSFLLSTVSETGGHLGSNLGAVELSLALHYCFST 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ Y HK+LTGRRD+  T RQ  G+SGF KR ESE+D FG GH+STSISA
Sbjct: 62  PQDKIVWDVGHQAYTHKLLTGRRDRFATQRQYKGISGFPKRCESEHDAFGVGHASTSISA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LGMAV  +L  +KNNV+AVIGDG++T G A+E +N AG+L  ++IV+LNDN ++S+   
Sbjct: 122 ALGMAVADNLDQKKNNVIAVIGDGSLTGGIAFEGLNQAGHLKKNLIVVLNDN-EMSISKN 180

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQI---GGPMHELAAKVDEYARGM 312
                   VGA S+ +SR  + R  REL++  K +   I   G  + + A + +   +G 
Sbjct: 181 --------VGAFSAFVSRKMTTRHFRELKKEMKELLTSIPAFGKDILKFARRAENSLKGF 232

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +  +   LFE LG  YIGP+DGH++  L+ +    +  +  GP+L+HV+T KG+GY  AE
Sbjct: 233 L--TPGALFEALGFDYIGPIDGHDLPGLIEVFNNAR--EFDGPLLLHVMTTKGKGYRPAE 288

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           +  DK+HGV  FD +TGK    S+ T SYT  F   L+  A+ D  VVAI AAM  GTGL
Sbjct: 289 ETPDKFHGVGAFDLSTGKAPAKSS-TISYTEVFGRTLVDLAKEDPKVVAITAAMPDGTGL 347

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
           N F    P R FDVGIAEQH + FAAGLA +G KP  AIYSSFMQRAYDQV HDV LQ L
Sbjct: 348 NFFSDALPDRFFDVGIAEQHGICFAAGLAADGFKPVAAIYSSFMQRAYDQVFHDVCLQNL 407

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV  AMDRAGLVG DGPTH G FD++FM  LP +  MAP DE EL HM+ TA  +   P 
Sbjct: 408 PVVIAMDRAGLVGDDGPTHHGVFDLSFMRHLPGLTFMAPKDENELRHMLKTALEL-KAPV 466

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG G GV L    + +P  +GKG +L EG  + ++  G+ V   + A+  L   G
Sbjct: 467 ALRYPRGAGYGVPLDKKMECLP--IGKGELLREGTDLTIVAIGSTVMPAVKAAEQLAEQG 524

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +   V +ARF KPLD  LI   A++   ++TVEE  + GGFGS V++ L  + +    VK
Sbjct: 525 ISAGVVNARFIKPLDADLILGQARATGRIVTVEENVLQGGFGSAVLELLQDNAM--SQVK 582

Query: 672 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            + L +PD+YI+ G+ A      G+    IAA V
Sbjct: 583 VKRLGIPDQYIEQGTQAQLRKDVGIDADGIAAAV 616


>gi|20807747|ref|NP_622918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
 gi|22095585|sp|Q8RAC5.1|DXS_THETN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|20516301|gb|AAM24522.1| Deoxyxylulose-5-phosphate synthase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 622

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 296/645 (45%), Positives = 419/645 (64%), Gaps = 32/645 (4%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           +L+ IN P  +K L I++L +L++E+R  ++  VSKTGGHL S+LG++ELT+ALHYVFN+
Sbjct: 1   MLEQINSPYDLKKLDIKDLPRLSEEIRQFIVEKVSKTGGHLASNLGIVELTLALHYVFNS 60

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+I+WDVGHQ Y HK++TGRRDK  T+RQ +GLSG+TKR+ES +D FG GHSSTS+SA
Sbjct: 61  PVDKIIWDVGHQCYVHKMITGRRDKFDTLRQFNGLSGYTKRTESIHDIFGAGHSSTSLSA 120

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            LG+A  RDLKG K +V+AVIGDGA+T G A EA+NN G    D+IVILN N ++S+   
Sbjct: 121 ALGIATARDLKGEKYHVIAVIGDGALTGGMALEALNNIGRSRKDVIVILNHN-EMSISEN 179

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAK---GVTKQIGGPMHELAAKVDEYARGM 312
                   VG+LS  LS+L+++    ++++       +   IG  +H+   K+ +  + +
Sbjct: 180 --------VGSLSLYLSKLRTDPTYNKVKQEIDNLLNIIPPIGKSLHKYIEKIKDSIKQL 231

Query: 313 ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAE 372
           +       FEELG  Y+GP+DGHNV++L+ +LE  K  K  GP+LIHVVT+KG+GY +AE
Sbjct: 232 V--VPGMFFEELGFTYLGPIDGHNVEELIEVLERSKKMK--GPLLIHVVTKKGKGYMFAE 287

Query: 373 KAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGL 432
           K  DK+H  A FD  TGK F    +  SY+  F + L   A  D+ +VAI AAM  GTGL
Sbjct: 288 KRPDKFHSAAPFDIETGK-FVGEGK-DSYSDVFGKTLAEMALKDEKIVAITAAMPEGTGL 345

Query: 433 NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKL 492
             F +  P R FDVGIAEQHA TFAAGLA EG KP+ A+YS+F+QRAYDQV+HDV +QKL
Sbjct: 346 IHFAKLIPDRFFDVGIAEQHATTFAAGLAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKL 405

Query: 493 PVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPS 552
           PV FA+DRAG+VG DG TH G FD++F+  +PN+ +M+P D  EL  MV  +  + D P 
Sbjct: 406 PVVFAVDRAGIVGEDGETHQGVFDISFLRAIPNIAIMSPKDANELVEMVKLSRNL-DFPV 464

Query: 553 CFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNG 612
             RYPRG     ++   ++     +GKG +L+EGE++A+   G  V   + A+ +L+ +G
Sbjct: 465 AIRYPRGKAGEYDI---SRKPSFPLGKGEVLLEGEKIAVFALGRMVSKSIDAAEILKGHG 521

Query: 613 LRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVK 671
           +   V + RF KPLD  LI  ++   ++++TVE+  I GG GS +++      LL+    
Sbjct: 522 INPFVVNLRFVKPLDEELILEISNKVDLVVTVEDNVIAGGVGSAILE------LLNDKKV 575

Query: 672 WRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 713
           +RP++    PD++I+HG       + GL    IA T+     + R
Sbjct: 576 YRPVLRLGFPDKFIEHGDVESLFKKYGLDSQSIADTILQRYKEMR 620


>gi|91225062|ref|ZP_01260284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio alginolyticus
           12G01]
 gi|91190005|gb|EAS76276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio alginolyticus
           12G01]
          Length = 621

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 304/638 (47%), Positives = 412/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P L   N P  ++ L    L  L DELR  ++ +VS++ GHL S LG +ELTVALHYV+N
Sbjct: 9   PTLALANTPEELRLLPKETLPNLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRDKM T+RQ DGL  F  R ESEYD    GHSSTSIS
Sbjct: 69  TPIDKLIWDVGHQAYPHKILTGRRDKMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMA+    +G+   +V+VIGDGA+TAG A+EAMN+AG +  DM+VILNDN ++S+  
Sbjct: 129 AGLGMAISAQKEGKGRKIVSVIGDGAITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+++ S      +RE  K V   +  P+ EL  + +E+ +GM+ 
Sbjct: 188 N--------VGALNNHLAKVLSGSLYTSIREGGKKVLSGV-PPIKELVRRTEEHLKGMV- 237

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEE G  YIGP+DGH+V++LV  L+ ++  K  GP  +H++T+KG+GY  AEK 
Sbjct: 238 -VPGTLFEEFGFNYIGPIDGHDVNELVKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKD 294

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP      KSS    +Y+  F + L   A  D  ++AI  AM  G+G+  
Sbjct: 295 PIGYHGVPKFDPTHNCLPKSSGGKPTYSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVR 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P + FDV IAEQHAVT A G+A  G  P  AIYS+F+QR YDQ++HD+ +  LPV
Sbjct: 355 FSKEYPDQYFDVAIAEQHAVTLATGMAIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G+FD++FM C+PNMV+MAPSDE E   M+ T       PS  
Sbjct: 415 MFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HSGPSAV 473

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+G+GVE+    +   LE+GKGR++ +GE+VA+L +GT + + L A+  L +    
Sbjct: 474 RYPRGSGMGVEIE--TEFTALEIGKGRMVRQGEKVAILSFGTFLGNALEAAEYLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVAD RF KPLD ALIR LA  H+VL+T+EE  I GG G+ VV+F+ +D ++   +   
Sbjct: 528 -TVADMRFVKPLDEALIRQLAADHDVLVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I  G+  +   + GL    I  ++ + L +
Sbjct: 585 -LGLPDEFIHQGTQDELHEELGLDAKGIEKSILDYLAK 621


>gi|160874500|ref|YP_001553816.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS195]
 gi|378707749|ref|YP_005272643.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS678]
 gi|418023372|ref|ZP_12662357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS625]
 gi|189027786|sp|A9KTL5.1|DXS_SHEB9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|160860022|gb|ABX48556.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS195]
 gi|315266738|gb|ADT93591.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS678]
 gi|353537255|gb|EHC06812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS625]
          Length = 622

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 313/639 (48%), Positives = 411/639 (64%), Gaps = 27/639 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+L   N P  ++ L    L Q+ADELR  ++ +V  + GH  S LG +ELTVALHYV+N
Sbjct: 9   PVLAQANTPNELRQLPQALLPQVADELREFLLKSVGISSGHFASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRDKMHT+RQ DGL  F  R ESEYD F  GHS TSIS
Sbjct: 69  TPFDRLIWDVGHQAYPHKILTGRRDKMHTIRQKDGLHPFPWREESEYDTFSVGHSGTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A L MA+  + +     VVAVIGDGAMT G  +EAMN+AG L +DM+V+LNDN ++S+  
Sbjct: 129 AALAMAIAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                    VGAL++ L++L S R    LRE  K V K  G P + E+A + +E+ +GM+
Sbjct: 188 N--------VGALNNHLAQLMSGRFYTTLREGGKKVLK--GMPVIKEMAKRTEEHLKGMV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                TLFEELG  YIGP+DGH+VD LV  +  ++N K  GP ++H++T+KGRGY  AEK
Sbjct: 238 VPG--TLFEELGFNYIGPIDGHDVDALVETMRNMRNLK--GPQVLHIMTKKGRGYEPAEK 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               +H V KFDP+  K+  +     +++  F + L   AE D+ V+AI  AM  G+G+ 
Sbjct: 294 DPIGWHAVPKFDPSLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLAITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP + FD  IAEQHAVT AAG ACEG KP  AIYS+F+QRAYDQ++HDV LQ+LP
Sbjct: 354 EFSQRFPKQYFDAAIAEQHAVTLAAGFACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR G+VGADGPTH G+FD++FM C+PNMV+MAPSDE E   M+ T    D  PS 
Sbjct: 414 VLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+  G         +P  +GKG I   G+R+A+L +GT     L ASAL  +  L
Sbjct: 474 VRYPRGSATGAMQVEAMTALP--IGKGVIKRVGKRIAILNFGT-----LLASALTAAESL 526

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV D RF KPLD  L++ +A++HEVL+TVEE +I GG G+ V++ L +  +    ++ 
Sbjct: 527 DATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQKLRMPKAVLQ- 585

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
             + LPD +I HGSP +      L    I A +   L Q
Sbjct: 586 --IGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYLAQ 622


>gi|126173595|ref|YP_001049744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS155]
 gi|386340352|ref|YP_006036718.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS117]
 gi|166201535|sp|A3D2B2.1|DXS_SHEB5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|125996800|gb|ABN60875.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS155]
 gi|334862753|gb|AEH13224.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS117]
          Length = 622

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 313/639 (48%), Positives = 410/639 (64%), Gaps = 27/639 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+L   N P  ++ L    L Q+ADELR  ++ +V  + GH  S LG +ELTVALHYV+N
Sbjct: 9   PVLAQANTPNELRQLPQALLPQVADELREFLLKSVGISSGHFASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRDKMHT+RQ DGL  F  R ESEYD F  GHS TSIS
Sbjct: 69  TPFDRLIWDVGHQAYPHKILTGRRDKMHTIRQKDGLHPFPWREESEYDTFSVGHSGTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A L MA+  + +     VVAVIGDGAMT G  +EAMN+AG L +DM+V+LNDN ++S+  
Sbjct: 129 AALAMAIAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                    VGAL++ L++L S R    LRE  K V K  G P + E+A + +E+ +GM+
Sbjct: 188 N--------VGALNNHLAQLMSGRFYTTLREGGKKVLK--GMPVIKEMAKRTEEHLKGMV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                TLFEELG  YIGP+DGH+VD LV  +  ++N K  GP ++H++T+KGRGY  AEK
Sbjct: 238 VPG--TLFEELGFNYIGPIDGHDVDALVETMRNMRNLK--GPQVLHIMTKKGRGYEPAEK 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               +H V KFDP+  K+  +     +++  F + L   AE D+ V+AI  AM  G+G+ 
Sbjct: 294 DPIGWHAVPKFDPSLFKKPTTKPGLPTFSQVFGKWLCDIAEQDEKVLAITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP + FD  IAEQHAVT +AG ACEG KP  AIYS+F+QRAYDQ++HDV LQKLP
Sbjct: 354 EFSQRFPKQYFDAAIAEQHAVTLSAGFACEGFKPVVAIYSTFLQRAYDQLIHDVALQKLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR G+VGADGPTH G+FD++FM C+PNMV+MAPSDE E   M+ T    D  PS 
Sbjct: 414 VLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG   G         +P  +GKG I   G+R+A+L +GT     L ASAL  +  L
Sbjct: 474 VRYPRGCATGATQVEAMTALP--IGKGVIKRVGKRIAILNFGT-----LLASALTAAESL 526

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV D RF KPLD  L++ +A++HEVL+TVEE +I GG G+ V++ L +  +    ++ 
Sbjct: 527 DATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQKLRMPKAVLQ- 585

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
             + LPD +I HGSP +      L    I A +   L Q
Sbjct: 586 --IGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYLAQ 622


>gi|170727813|ref|YP_001761839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella woodyi ATCC
           51908]
 gi|229836081|sp|B1KQY8.1|DXS_SHEWM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169813160|gb|ACA87744.1| deoxyxylulose-5-phosphate synthase [Shewanella woodyi ATCC 51908]
          Length = 621

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 311/637 (48%), Positives = 412/637 (64%), Gaps = 27/637 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+L   N P  ++ L    L QLADELR  ++ +V K+ GH  S LG +ELTVALHYV+N
Sbjct: 9   PVLAQANTPDELRQLPQAVLPQLADELRGFLLKSVGKSSGHFASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRD MHT+RQ  G+  F  R ESEYD F  GHS TSIS
Sbjct: 69  TPFDRLIWDVGHQAYPHKILTGRRDAMHTIRQKGGIHPFPWREESEYDTFSVGHSGTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A L MAV  + +     VV+VIGDGAMT G  +EAMN+AG L +DM+V+LNDN ++S+  
Sbjct: 129 AALAMAVAAEKEQAGRKVVSVIGDGAMTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                    VGAL++ L++L S R    +RE +K V K  G P + E+A + +E+ +GM+
Sbjct: 188 N--------VGALNNHLAQLMSGRFYTTIRESSKKVLK--GMPVIKEMAKRTEEHLKGMV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                T+FEELG  YIGP+DGH+VD LV  +  ++N   +GP ++H++T+KGRGY  AEK
Sbjct: 238 VPG--TMFEELGFNYIGPIDGHDVDALVETMRNMRNL--SGPQILHIMTKKGRGYEPAEK 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               +H V KFDP+T ++  S     +++  F + L   AE DK V+ I  AM  G+G+ 
Sbjct: 294 DPIGWHAVPKFDPSTFEKPASKPSNPTFSQVFGKWLCDVAEKDKKVLGITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP + FD  IAEQHAVT  AG ACEGLKP  AIYS+F+QR YDQ++HDV LQKLP
Sbjct: 354 EFSQRFPKQYFDAAIAEQHAVTLGAGFACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR G+VGADGPTH G+FD++FM  +PNMV+MAPSDE E   M+ T    +D P+ 
Sbjct: 414 VLFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYNDGPTA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG+  G   P   +   L +GKG I  +G++VA+L +GT + S L A   L++   
Sbjct: 474 VRYPRGSATGA--PQIEEMTALPIGKGLIKRQGQKVAILNFGTLLASVLTAGESLDA--- 528

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TVAD RF KPLD  LI+ LA SH+VL+TVEE +I GG GS V++ L Q   L   +  
Sbjct: 529 --TVADMRFVKPLDVELIKELANSHDVLVTVEENAIMGGAGSGVLELLQQ---LKQPMPV 583

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
             L LPD +I HG   + +A+  L  + I   + + L
Sbjct: 584 LQLGLPDEFIKHGDSGEIIAELKLDAAGILEQIESYL 620


>gi|345430246|ref|YP_004823366.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Haemophilus parainfluenzae T3T1]
 gi|301156309|emb|CBW15780.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Haemophilus parainfluenzae T3T1]
          Length = 617

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 300/633 (47%), Positives = 413/633 (65%), Gaps = 26/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR+ ++ +VS++ GHL S LG +ELTVALHY+F 
Sbjct: 5   PLLSLINSPEDLRLLNKEQLPQLCQELRSYLLESVSQSSGHLASGLGTVELTVALHYIFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ  G+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G++ 
Sbjct: 184 N--------VGALNNHLARIFSGSLYSTVRDGSKKILDKV-PTVKNFMKKTEEHMKGVMF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+L+A L  +++ K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPIDGHNIDELIATLSNMRDLK--GPQFLHIKTKKGKGYEPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  KS+A+  +Y+  F + L   AE D  +V I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPTSGQLPKSNAKP-TYSKIFGDWLCEMAEQDDKLVGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSERFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYKC-GKPAAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P  +   LE+G+ +++ +GE++A+L +GT     L  +AL  +  L 
Sbjct: 471 RYPRGNAIGVELTPLAE---LEIGRSKMVRQGEKIAILNFGT-----LLPAALSVAEKLN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D A I  +A +H+V++T+EE +I GG GS V + L   G    T    
Sbjct: 523 ATVVDMRFVKPIDEARILEVANTHDVIVTLEENAIQGGAGSAVSEVLNSHG---KTTALL 579

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
            L LPD +I  G+  + LA+  L    I   + 
Sbjct: 580 QLGLPDIFIPQGTQQEALAEIKLDEKGIEEQII 612


>gi|87120693|ref|ZP_01076586.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinomonas sp. MED121]
 gi|86163921|gb|EAQ65193.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinomonas sp. MED121]
          Length = 641

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 300/646 (46%), Positives = 421/646 (65%), Gaps = 32/646 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E  +QRP TPLLD IN P +++ LS  +L  L  +LR  ++F+V +TGGH G+ LGVIEL
Sbjct: 4   EIPTQRPSTPLLDQINSPANLRELSKEQLSDLVSQLREFMLFSVGQTGGHFGAGLGVIEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           T+ALHY++N P DR++WDVGHQTYPHKILTGRR+++ ++R   G+SGF KR ESE+D FG
Sbjct: 64  TIALHYIYNTPDDRLVWDVGHQTYPHKILTGRREELLSIRHEHGISGFPKRDESEFDTFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSI A LGM++  +  G     VA+IGDGAM+AG A+EA+N+AG +++DM+VILN
Sbjct: 124 VGHSSTSIGAALGMSIAANRMGIDRKAVAIIGDGAMSAGMAFEALNHAGDVNADMMVILN 183

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DNK +S+          PVGALS   +R+ +++    +RE  + V K +   + ELA K 
Sbjct: 184 DNK-MSISK--------PVGALSKYFARIWASKTYATVRESGRKVLKGLPSAL-ELARKA 233

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+ +GM+  +  TLFEELG  YIGP+DGH+++ L+  +  +K+   +GP L+HV+T+KG
Sbjct: 234 EEHMKGMV--APGTLFEELGFNYIGPIDGHDMESLITTISNMKD--RSGPQLLHVITQKG 289

Query: 366 RGYPYAEKAADKYHGVAKFD----PATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVA 421
           +G+  AE     YH + K +    PAT K+ K++     Y+  F   L   AE D  ++A
Sbjct: 290 KGFEPAEGDPIGYHAINKIEPEAQPATLKEAKTTKSHPKYSNIFGRWLCDAAEKDDSLMA 349

Query: 422 IHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYD 481
           I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+AC+G+KP  AIYS+F+QRAYD
Sbjct: 350 ITPAMKEGSDLIEFAERFPKRYFDVAIAEQHAVTLAAGMACDGVKPVVAIYSTFLQRAYD 409

Query: 482 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMV 541
           Q++HDV LQ L V FA+DRAGLVG DGPTH G +D++++ C+PNM+VMAPSDE E   M+
Sbjct: 410 QLIHDVALQNLDVLFAIDRAGLVGEDGPTHAGVYDLSYLRCIPNMLVMAPSDEDECRKML 469

Query: 542 ATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYGTAVQS 600
            T       P+  RYPRG GIG E+ P      L +GK R L  G+  + + G+G+   +
Sbjct: 470 HTGYEYKG-PAAVRYPRGTGIGAEIDPSLS--TLAIGKSRTLHTGQANILICGFGSPTHA 526

Query: 601 CLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQF 659
            + A+  L++     T+ D RF KPLD + + +LA   ++++TVEE SI GG GS V +F
Sbjct: 527 AMQAAKALDA-----TLLDMRFVKPLDGSTLLALA-GDKLIVTVEENSIMGGAGSAVSEF 580

Query: 660 LAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           L  + +   T+    + LPD+Y +H S +  L + GL    I   +
Sbjct: 581 LLSNNIQCPTLH---IGLPDQYEEHASHSAMLKRVGLDKDGIQKQI 623


>gi|374324622|ref|YP_005077751.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus terrae
           HPL-003]
 gi|357203631|gb|AET61528.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus terrae
           HPL-003]
          Length = 632

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 297/627 (47%), Positives = 415/627 (66%), Gaps = 24/627 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  I  P  +K+LS+ EL  LA+E+R+ +I  +S TGGHL S+LGV+ELT+ALHY +N+
Sbjct: 2   LLPHIKQPGDLKSLSVEELDSLAEEIRSFLIEKLSVTGGHLASNLGVVELTIALHYCYNS 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD++++DVGHQ Y HKILTGR D+  T+RQ DGL GF KRSESE+D +  GHSSTS+SA
Sbjct: 62  PKDKMIFDVGHQAYVHKILTGRMDRFDTLRQRDGLCGFVKRSESEHDVWEAGHSSTSLSA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            +GMA+ RDLKG  N V+A+IGDGA+T G A+EA+N+ G+   +++VILNDN ++S+   
Sbjct: 122 AMGMALARDLKGEDNKVIALIGDGALTGGMAFEALNHIGHERKNLMVILNDN-EMSIA-- 178

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKV-DEYARG 311
                 P VGA+ + LS+++S+R     ++  + + K+   IGG + + A +V D     
Sbjct: 179 ------PNVGAMHNYLSKIRSDRYYLRAKDELEVLLKKIPAIGGKLAKSAGRVKDSLKYM 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+ G    LFEELGL Y+GPVDGH++  L+   ++  N   TGPVL+HVVT KG+GY  A
Sbjct: 233 MVPG---VLFEELGLTYLGPVDGHDLPKLIETFKQADN--VTGPVLVHVVTTKGKGYKPA 287

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E  + K+HG++ +   +G+  K+      YT  F   LI  AE D+ ++A+  AM GG+G
Sbjct: 288 EADSHKWHGISPYKMESGQVLKAVGNPM-YTEIFGRTLIELAEKDERIIAVTPAMPGGSG 346

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F + FPTR  DVGIAEQHA T  A LA EG+KP  A+YS+FMQRAYDQ+VHD+    
Sbjct: 347 LVPFSKEFPTRMIDVGIAEQHAATMCAALAMEGMKPVFAVYSTFMQRAYDQIVHDICRHN 406

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
             V FA+DRAG VGADG TH G FDV F+  +PN+V+M P DE EL HM+ TA   DD P
Sbjct: 407 ANVMFAIDRAGFVGADGETHHGVFDVAFLRHIPNLVLMMPKDENELRHMMKTALDYDDGP 466

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             +RYPR NG+GV L    K IP  +G   +L +GE  A++  G  +Q    A+  ++  
Sbjct: 467 IAYRYPRVNGVGVPLDTELKAIP--IGSWELLRKGEGYAVIASGPMLQVATEAAEAMKRE 524

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTV 670
           GL++ V +ARF KP+D  ++R LA+ H  LI +EE S  G  GS V++F A++ + +  V
Sbjct: 525 GLQVGVVNARFLKPVDEDMLRELARQHTKLIVLEEASEAGSLGSAVLEFYAKEEMQNAQV 584

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLT 697
             R + +PD +++HGS  +Q ++AGLT
Sbjct: 585 --RLMGIPDMFVEHGSIKEQRSEAGLT 609


>gi|322515003|ref|ZP_08068013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus ureae ATCC
           25976]
 gi|322118992|gb|EFX91164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus ureae ATCC
           25976]
          Length = 626

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/640 (47%), Positives = 412/640 (64%), Gaps = 33/640 (5%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  IN P  ++ L+  +L+ +ADELRA ++ +VS+T GHL S LGV+ELTVALHYV+  
Sbjct: 16  LLSQINSPEDLRLLAKEQLQPVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQT 75

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSISA
Sbjct: 76  PFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISA 135

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
           G+G+AV  + +      V VIGDGA+TAG A+EAMN+AG + +DM+VILNDN ++S+   
Sbjct: 136 GVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGAMHTDMLVILNDN-EMSISEN 194

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+IS 
Sbjct: 195 --------VGALNNHLARIFSGSIYTTVRDGSKKVLDKV-PTIKNFMKKSEEHMKGVISP 245

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
             STLFEELG  YIGPVDGHN+D+LV  L  ++  K  GP  +H+ T+KG+GY  AE   
Sbjct: 246 E-STLFEELGFNYIGPVDGHNIDELVKTLSNMRELK--GPQFLHIRTKKGKGYEPAENDP 302

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
             YHGV KFDP  G Q   S    +Y+  F   L   AE D  ++ I  AM  G+G+  F
Sbjct: 303 IGYHGVPKFDPIRG-QLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEF 361

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
            +RFP + FDV IAEQHAVTF AGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV 
Sbjct: 362 SKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVI 421

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           FA+DRAG+VGADG TH G+FDV+FM C+PNM +M PSDE E+  M+ TA  + + P+  R
Sbjct: 422 FAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVR 480

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRL 615
           YPRGN  GV L P      LEVGKG+++ +G++VA+L +G      L   A + +     
Sbjct: 481 YPRGNAQGVALEPMQA---LEVGKGKLIQQGQKVAILNFGP-----LLNEARIVAEKHNY 532

Query: 616 TVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP 674
           T+ D RF KPLD  L+  LA SHE+L+T+EE +I GG GS V ++L + G      K RP
Sbjct: 533 TLIDMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSFVNEYLQKIG------KIRP 586

Query: 675 LVL---PDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
           +V+   PD ++   +  +  +  GL  + I   +  ++ Q
Sbjct: 587 IVMLGIPDFFVPQATQTESYSDLGLDAAGIEQKIQAVVNQ 626


>gi|52425114|ref|YP_088251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia
           succiniciproducens MBEL55E]
 gi|81609544|sp|Q65TP4.1|DXS_MANSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|52307166|gb|AAU37666.1| Dxs protein [Mannheimia succiniciproducens MBEL55E]
          Length = 617

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/636 (47%), Positives = 414/636 (65%), Gaps = 27/636 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L Q+ +ELR  ++ +VS+T GHL S LG +ELTVALHY+F 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQVCNELREYLLESVSRTSGHLASGLGTVELTVALHYIFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ DG+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRERMTTIRQKDGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+A+  + +     ++ VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAIAAEKENAGRKIICVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VG L++ L+R+ S      LR+ +K +   +  P+     K +E+ +G+IS
Sbjct: 184 N--------VGGLNNHLARIFSGSIYSSLRDSSKKILDTM-PPIKNFMKKTEEHMKGVIS 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+++L+A L  +K  K  GP  +H+ T+KG+GY  AE+ 
Sbjct: 235 PI-STLFEELGFNYIGPIDGHNIEELIATLSNMKTLK--GPQFLHIRTKKGKGYTPAEQD 291

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFD  TG+  KS+A T +Y+  F E L   AE D+ ++ I  AM  G+G+  
Sbjct: 292 PIGFHGVPKFDYHTGQLPKSTA-TPTYSQIFGEWLCETAEQDEKLIGITPAMREGSGMVE 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP + FDV IAEQHAVT AAGLA  G KP  AIYS+F+QRAYDQV+HDV +Q LPV
Sbjct: 351 FSNRFPDQYFDVAIAEQHAVTLAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++F+ C+PN+++MAPS+E E   M+ T      +P+  
Sbjct: 411 LFAIDRAGIVGADGPTHQGAFDLSFLRCIPNLIIMAPSNENECRLMLHTGYCC-GKPAAV 469

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P  K   LE+GK  ++ +G+ +A+L +GT     L  +AL  +  L 
Sbjct: 470 RYPRGNAIGVELEPLRK---LEIGKSNLVRQGQDIAILNFGT-----LLPNALDVAEKLN 521

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KPLDH  I  LAK+H  L+T+EE +I GG GS V + +    +    V   
Sbjct: 522 ATVVDMRFVKPLDHERINELAKTHRTLVTLEENTIQGGAGSAVSEVV---NIQQHHVNIL 578

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            L LPD ++  G+  + L +  L  + I   + N L
Sbjct: 579 HLGLPDEFVAQGTQQEVLKELKLDATGIEEQIKNFL 614


>gi|254228605|ref|ZP_04922029.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio sp. Ex25]
 gi|262395027|ref|YP_003286881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio sp. Ex25]
 gi|151938784|gb|EDN57618.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio sp. Ex25]
 gi|262338621|gb|ACY52416.1| 1-deoxy-D-xylulose 5-phosphate synthase [Vibrio sp. Ex25]
          Length = 621

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/638 (47%), Positives = 412/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P L   N P  ++ L    L  L DELR  ++ +VS++ GHL S LG +ELTVALHYV+N
Sbjct: 9   PTLALANTPEELRLLPKETLPNLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRDKM T+RQ DGL  F  R ESEYD    GHSSTSIS
Sbjct: 69  TPIDKLIWDVGHQAYPHKILTGRRDKMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMA+    +G+   +V+VIGDGA+TAG A+EAMN+AG +  DM+VILNDN ++S+  
Sbjct: 129 AGLGMAISAQKEGKGRKIVSVIGDGAITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+++ S      +RE  K V   +  P+ EL  + +E+ +GM+ 
Sbjct: 188 N--------VGALNNHLAKVLSGSLYTSIREGGKKVLSGV-PPIKELVRRTEEHLKGMV- 237

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEE G  YIGP+DGH+V++LV  L+ ++  K  GP  +H++T+KG+GY  AEK 
Sbjct: 238 -VPGTLFEEFGFNYIGPIDGHDVNELVKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKD 294

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV KFDP      KSS    +Y+  F + L   A  D  ++AI  AM  G+G+  
Sbjct: 295 PIGYHGVPKFDPTHNCLPKSSGGKPTYSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVR 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + +P + FDV IAEQHAVT A G+A  G  P  AIYS+F+QR YDQ++HD+ +  LPV
Sbjct: 355 FSKEYPDQYFDVAIAEQHAVTLATGMAIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAGLVGADG TH G+FD++FM C+PNMV+MAPSDE E   M+ T       PS  
Sbjct: 415 MFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAV 473

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG+G+GVE+    +   LE+GKGR++ +GE+VA+L +GT + + L A+  L +    
Sbjct: 474 RYPRGSGMGVEIE--TEFTALEIGKGRMVRQGEKVAILNFGTFLGNALEAAEYLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TVAD RF KPLD ALIR LA  H+VL+T+EE  I GG G+ VV+F+ +D ++   +   
Sbjct: 528 -TVADMRFVKPLDEALIRQLAADHDVLVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            + LPD +I  G+  +   + GL    I  ++ + L +
Sbjct: 585 -IGLPDEFIHQGTQDELHEELGLDAKGIEKSILDYLAK 621


>gi|119474635|ref|ZP_01614988.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine gamma
           proteobacterium HTCC2143]
 gi|119450838|gb|EAW32071.1| 1-deoxy-D-xylulose-5-phosphate synthase [marine gamma
           proteobacterium HTCC2143]
          Length = 632

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 309/641 (48%), Positives = 414/641 (64%), Gaps = 26/641 (4%)

Query: 66  EYHSQRPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIEL 125
           E    RP TPLLD I+    ++ L   +L QL DELR  ++F+V +TGGH G+ LGV+EL
Sbjct: 4   EIPHSRPETPLLDAIDQTADLRQLEEAQLLQLTDELRQYLLFSVGQTGGHFGAGLGVVEL 63

Query: 126 TVALHYVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFG 185
           TVALHY++N P DRI+WDVGHQTYPHKILTGRR+KM TMR  DGLSGF KRSES+YD FG
Sbjct: 64  TVALHYLYNTPDDRIVWDVGHQTYPHKILTGRREKMPTMRIQDGLSGFPKRSESDYDTFG 123

Query: 186 TGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 245
            GHSSTSISA LGMA+    +G     VAVIGDGAMTAG A+EA+ +A ++D++M+VILN
Sbjct: 124 VGHSSTSISAALGMAIAARQQGLDRKCVAVIGDGAMTAGMAFEALTHASHVDANMLVILN 183

Query: 246 DNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKV 305
           DN  +S+   T        G L++  S++ +++     R  +K V  +I  P    A +V
Sbjct: 184 DN-LMSISHNT--------GGLNTYFSKIWASKTYTNFRAGSKKVFSKI-PPAWGFAKRV 233

Query: 306 DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKG 365
           +E+ +GM+ G G TLFEELG  YIGP+DGH++  L+  +  +++ +  GP L+H++T+KG
Sbjct: 234 EEHIKGMV-GPG-TLFEELGFNYIGPIDGHDLPMLINTIGNMRDLQ--GPQLLHIMTKKG 289

Query: 366 RGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAA 425
           +G+  AE     YH + K +       K     + Y   F + L   A  D+ ++ I  A
Sbjct: 290 KGFTPAEDDPVGYHAINKIEATPPSTPKKVTAKKKYQRIFGDWLCDMAAQDELLIGITPA 349

Query: 426 MGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
           MG G+G+  F  +FP R  DV IAEQHAVT AAG+AC+GLKP  AIYS+F+QRAYDQ++H
Sbjct: 350 MGEGSGMIEFSEKFPDRYHDVAIAEQHAVTLAAGMACDGLKPVVAIYSTFLQRAYDQLIH 409

Query: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAA 545
           DV LQ L V F +DRAGLVG DGPTH GSFD++++ C+PNM+VM PSDE E   ++ T  
Sbjct: 410 DVALQNLNVLFGIDRAGLVGEDGPTHAGSFDLSYLRCIPNMMVMTPSDENETRQLLYTGF 469

Query: 546 AIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAS 605
                P+  RYPRG G G  +    +   LE+GKG I   G +VA+L +GT     L A+
Sbjct: 470 Q-HIGPAAVRYPRGTGPGTAIE--QQMTALEIGKGVIRRRGSQVAILNFGT-----LLAN 521

Query: 606 ALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV-QFLAQDG 664
           AL  +N L  TVAD RF KP+D +LI  LAKSH++++T+EE +I G     V ++L   G
Sbjct: 522 ALEVANDLDATVADMRFVKPIDESLITELAKSHDLIVTLEENAIAGGAGAAVSEYLNSCG 581

Query: 665 LLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           +   T+    L LPDRYIDHG   +QL Q GL    I  ++
Sbjct: 582 INTATLH---LGLPDRYIDHGKHENQLQQCGLDAPGIRTSI 619


>gi|375309123|ref|ZP_09774404.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus sp. Aloe-11]
 gi|375078432|gb|EHS56659.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus sp. Aloe-11]
          Length = 632

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 299/631 (47%), Positives = 413/631 (65%), Gaps = 24/631 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL  I  P  +K+LS+ EL  LA+E+R+ +I  +S TGGHL S+LGV+ELT+ALHY +N+
Sbjct: 2   LLPHIKQPGDLKSLSVEELASLAEEIRSFLIEKLSVTGGHLASNLGVVELTIALHYCYNS 61

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           PKD++++DVGHQ Y HKILTGR D+  T+RQ DGL GF KRSESE+D +  GHSSTS+SA
Sbjct: 62  PKDKMIYDVGHQAYVHKILTGRMDRFDTLRQRDGLCGFVKRSESEHDVWEAGHSSTSLSA 121

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
            +GMA+ RDLKG  N V+AVIGDGA+T G A+EA+N+ G+   +++VILNDN ++S+   
Sbjct: 122 AMGMALARDLKGEDNKVIAVIGDGALTGGMAFEALNHIGHERKNLMVILNDN-EMSIA-- 178

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQ---IGGPMHELAAKV-DEYARG 311
                 P VGA+ + LS+++S+R     ++  + + K+   IGG + + A +V D     
Sbjct: 179 ------PNVGAMHNYLSKIRSDRHYLRAKDELEVLLKKIPAIGGKLAKSAGRVKDSLKYM 232

Query: 312 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
           M+ G    LFEELGL Y+GPVDGH++  L+    +  N   TGPVL+HVVT KG+GY  A
Sbjct: 233 MVPG---VLFEELGLTYLGPVDGHDLPKLIETFHQADN--VTGPVLVHVVTTKGKGYKPA 287

Query: 372 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 431
           E  + K+HG++ +   +G+  K+      YT  F   LI  AE D+ ++A+  AM GG+G
Sbjct: 288 EADSHKWHGISPYKIESGQVLKAVGNPM-YTEIFGRTLIELAEQDERIIAVTPAMPGGSG 346

Query: 432 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 491
           L  F   FPTR  DVGIAEQHA T  A LA EGLKP  A+YS+FMQRAYDQ+VHD+    
Sbjct: 347 LVPFSEEFPTRMIDVGIAEQHAATMCAALAMEGLKPVFAVYSTFMQRAYDQIVHDICRHN 406

Query: 492 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 551
             V FA+DRAG VGADG TH G FDV F+  +PN+V+M P DE EL HM+ TA   DD P
Sbjct: 407 ANVMFAIDRAGFVGADGETHHGVFDVAFLRHIPNLVLMMPKDENELRHMMKTALDYDDGP 466

Query: 552 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 611
             +RYPR N +GV L    K IP  +G   +L +GE  A++  G  +Q    A+  ++  
Sbjct: 467 IAYRYPRVNVVGVPLDSELKAIP--IGSWELLRKGEGYAVIASGPMLQVATEAAETMKRE 524

Query: 612 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTV 670
           GL++ V +ARF KP+D  ++R LA+ H  LI +EE S  G  GS V++F A++G+ +  V
Sbjct: 525 GLQVGVVNARFLKPVDEDMLRELARQHTKLIVLEEASEAGSLGSAVLEFYAKEGIQNAQV 584

Query: 671 KWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 701
             R + +PD +++HGS  +Q A+ GLT   +
Sbjct: 585 --RLMGIPDIFVEHGSIKEQRAEVGLTAESV 613


>gi|325578413|ref|ZP_08148548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160149|gb|EGC72278.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 617

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 300/633 (47%), Positives = 412/633 (65%), Gaps = 26/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELR+ ++ +VS+T GHL S LG +ELTVALHY+F 
Sbjct: 5   PLLSLINSPEDLRLLNKDQLPQLCQELRSYLLESVSQTSGHLASGLGTVELTVALHYIFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ  G+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAVAAERENAGRKTVCVIGDGAITAGMAFEALNHAGSLHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K +  ++   +     K +E+ +G++ 
Sbjct: 184 N--------VGALNNHLARIFSGSLYSTVRDGSKKILDKV-PTVKNFMKKTEEHMKGVMF 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+D+L+A L  +++ K  GP  +H+ T+KG+GY  AEK 
Sbjct: 235 SPESTLFEELGFNYIGPIDGHNIDELIATLSNMRDLK--GPQFLHIKTKKGKGYEPAEKD 292

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  KS+A+  +Y+  F + L   AE D  +V I  AM  G+G+  
Sbjct: 293 PIGFHGVPKFDPTSGQLPKSNAKP-TYSKIFGDWLCEMAEQDDKLVGITPAMREGSGMVE 351

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 352 FSERFPQQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 411

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 412 LFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYKC-GKPTAV 470

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL P  +   LE+G+ +++ +GE++A+L +GT     L  +AL  +  L 
Sbjct: 471 RYPRGNAIGVELTPLAE---LEIGRSKMVRQGEKIAILNFGT-----LLPAALSVAEKLN 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D A I  +A +H+ ++T+EE +I GG GS V + L   G    T    
Sbjct: 523 ATVVDMRFVKPIDEARILEMADTHDFIVTLEENAIQGGAGSAVSEVLNSHG---KTTALL 579

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 706
            L LPD +I  G+  + LA+  L    I   + 
Sbjct: 580 QLGLPDIFIPQGTQQEALAEIKLDEKGIEEQII 612


>gi|374621383|ref|ZP_09693915.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ectothiorhodospira sp.
           PHS-1]
 gi|373940516|gb|EHQ51061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ectothiorhodospira sp.
           PHS-1]
          Length = 627

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 308/632 (48%), Positives = 414/632 (65%), Gaps = 26/632 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I+ P  ++  S+ EL  LADE+RA ++ +VS+TGGHL ++LG +ELT+ALHY F 
Sbjct: 17  PLLSRIHSPEDVRKCSLNELPVLADEMRAFLLESVSRTGGHLAANLGTVELTIALHYTFA 76

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+DR++WDVGHQ+Y HKIL+GRRD MHT+R+ DGL+GF KR ES YD FG GHSSTSI 
Sbjct: 77  TPEDRLVWDVGHQSYTHKILSGRRDAMHTLRKKDGLAGFPKREESPYDAFGVGHSSTSIG 136

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+    KG K   +A+IGDGAMTAG A+EA+N+AG   +D++VILNDN     P 
Sbjct: 137 AALGMALAARQKGEKRKSIAIIGDGAMTAGMAFEALNHAGDEKADLLVILNDNNMSISPN 196

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGA++  L+RL S      +RE +K V + +  PM E   + +E+ +GMI 
Sbjct: 197 ---------VGAMNRYLARLLSGPIYSTMREGSKKVLEHMP-PMREFMRRAEEHVKGMII 246

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEELGL Y GPVDGH++  LV +L  ++     GP+L+HVVT KGRGY  AE+ 
Sbjct: 247 PG--TLFEELGLNYYGPVDGHDMVGLVKMLRNLQ--AMDGPLLLHVVTHKGRGYAPAEED 302

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV  FDP  G Q   S  T +YT  F + L  +A  D+ +VAI  AM  G+G+  
Sbjct: 303 PCTYHGVGSFDPEQGIQNGKSGGTPTYTQVFGDWLCDQAAADERMVAITPAMCEGSGMRA 362

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  ++P R  DVGIAEQHA+T AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV LQ LPV
Sbjct: 363 FACKYPERYHDVGIAEQHALTLAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVVLQDLPV 422

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
             A+DRAG+VG DGPTH GSFD++F+ C+P MV+M P+DE E   M++T   + D+P+  
Sbjct: 423 LLAIDRAGVVGPDGPTHAGSFDLSFLRCIPGMVIMTPADENECRRMLSTGYLL-DQPAAV 481

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPR  G GV +  G   +PL VG+  I  +G+ VA+L +GT     L   AL  ++ L 
Sbjct: 482 RYPRSKGTGVTIDEGL--LPLPVGEADIRRKGKGVAILAFGT-----LLTQALEVADTLD 534

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV + RF +PLD   +   A++H++++T+E+  + GG GS V + LA+    D T +  
Sbjct: 535 ATVINMRFVRPLDETRVLEAARTHDLIVTIEDNVVAGGAGSAVAECLARH---DVTARLL 591

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
            L LPDR+  HG+  + LA AGL  + I A +
Sbjct: 592 HLGLPDRFQSHGTREELLADAGLDTAGIEAAI 623


>gi|416164450|ref|ZP_11607215.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           N1568]
 gi|325127524|gb|EGC50450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria meningitidis
           N1568]
          Length = 635

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 313/651 (48%), Positives = 416/651 (63%), Gaps = 47/651 (7%)

Query: 73  PTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYV 132
           P+PLLD I+ P  ++ L  ++L +LA ELRA ++ +V +TGGH  S+LG +ELT+ALHYV
Sbjct: 3   PSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGGHFASNLGAVELTIALHYV 62

Query: 133 FNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTS 192
           ++ P+D+++WDVGHQ+YPHKILTGR+++MHTMRQ  GL+GF KRSESEYD FG GHSSTS
Sbjct: 63  YDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAGFPKRSESEYDAFGVGHSSTS 122

Query: 193 ISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSL 252
           I A LGMA    L G     VA+IGDGAMTAGQA+EA+N AG +D D++V+LNDN ++S+
Sbjct: 123 IGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEALNCAGDMDVDLLVVLNDN-EMSI 181

Query: 253 PTATLDGPIPPVGALSSALSRLQSN--RPLRELREVAKG----VTKQIGGPMHELAAKVD 306
                    P VGAL   L+   SN  R +  L    K     V  +I G M E A KV+
Sbjct: 182 S--------PNVGALPKYLA---SNVVRDMHGLLSTVKAQTGKVLDKIPGAM-EFAQKVE 229

Query: 307 EYARGMI-----SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVV 361
              + +      +    +LFE  G  Y GPVDGHNV++LV +L+++++ K  GP L+HV+
Sbjct: 230 HKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLRSRK--GPQLLHVI 287

Query: 362 TEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS---ARTQSYTTYFAEALIAEAEVDKD 418
           T+KG GY  AE    KYH VAK    +  Q  S    A   +YT  F + L   A  D  
Sbjct: 288 TKKGNGYKLAENDPVKYHAVAKLPKESAAQMPSENKPAAKPTYTQVFGKWLCDRAAADSR 347

Query: 419 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 478
           +VAI  AM  G+GL  F +RFP R FDVGIAEQHAVTFA GLACEG+KP  AIYS+F+QR
Sbjct: 348 LVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAIYSTFLQR 407

Query: 479 AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF 538
           AYDQ+VHD+ LQ LPV FA+DRAG+VGADGPTH G +D++F+ C+PNM+V APSDE E  
Sbjct: 408 AYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLRCVPNMIVAAPSDENECR 467

Query: 539 HMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAV 598
            +++T     D P+  RYPRG G G  +  G + +  E+GKG I  EGE+ A + +G+ V
Sbjct: 468 LLLSTCYQA-DAPAAVRYPRGTGTGAPVSDGMETV--EIGKGIIRREGEKTAFIAFGSMV 524

Query: 599 QSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVV 657
              LA +  L +     TVAD RF KP+D  LI  LA+SH+ ++T+EE +  GG G  V+
Sbjct: 525 APALAVAEKLNA-----TVADMRFVKPIDEELIVRLARSHDRIVTLEENAEQGGAGGAVL 579

Query: 658 QFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLTPSHIAATV 705
           + LA+ G+       +P++L    D    HG P   L   GL+   +   V
Sbjct: 580 EVLAKHGIC------KPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVERRV 624


>gi|333985124|ref|YP_004514334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
           MC09]
 gi|333809165|gb|AEG01835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylomonas methanica
           MC09]
          Length = 620

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/633 (47%), Positives = 411/633 (64%), Gaps = 27/633 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL TI+ P  ++ L   +LK LADE+R  +   VS +GGH  + LG +ELTVALHYVFN
Sbjct: 8   PLLHTIHSPADIRALPKDQLKPLADEVREYLTHTVSISGGHFSAGLGTVELTVALHYVFN 67

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P+D+++WDVGHQ YPHKILTGR+D+M T+R   G+S F  R ESEYD FG GHSSTSIS
Sbjct: 68  TPEDQLVWDVGHQAYPHKILTGRKDRMQTIRTLGGVSAFPSRDESEYDAFGVGHSSTSIS 127

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A LGMA+   L+G    +VA+IGDG++T G AYEAMN+AG ++++++VILNDN  +S+  
Sbjct: 128 AALGMAIASQLRGEDKKMVAIIGDGSITGGMAYEAMNHAGDVNANLLVILNDN-DMSIS- 185

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                  PPVGA+++ L+++ S++    +RE +K     +   + ELA K +E+ +GMI 
Sbjct: 186 -------PPVGAMNNYLTKVLSSKLYSSVREESKKALASMPS-VWELARKTEEHVKGMI- 236

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               TLFEELG  Y GP+DGH+V  LV+ LE++K+   +GPV +HVVT+KG+GY  AEK 
Sbjct: 237 -VPGTLFEELGFNYFGPIDGHDVAMLVSTLEKLKD--ISGPVFLHVVTKKGKGYAPAEKD 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
              YHGV  FDP+     KS+     +YT  F   L   A  D+ ++ I  AM  G+GL 
Sbjct: 294 PLAYHGVPAFDPSKDSLPKSAPSPHPTYTEVFGNWLCDMAAQDERLLGITPAMREGSGLV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F ++FP R FDV IAEQHAVT AAG AC+G KP  AIYS+F+QRAYDQ++HDV LQKL 
Sbjct: 354 KFSQQFPKRYFDVAIAEQHAVTLAAGQACQGAKPVVAIYSTFLQRAYDQLIHDVALQKLD 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DRAGLVG DGPTH GS+D ++M C+PNM+VMAP+DE E   M+ T    +  P+ 
Sbjct: 414 VLFALDRAGLVGPDGPTHAGSYDFSYMRCIPNMLVMAPADENECRQMLTTGYQYNG-PAS 472

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG G G  +   +    L +GK  I  +G R+A+L +G+ V   + A   L +   
Sbjct: 473 VRYPRGKGPGASV--DSDLTALAIGKAEIRHQGGRIAILAWGSMVTPAVEAGKQLGA--- 527

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV + RF KP D AL+  +AKSH+  +TVEE  I GG GS + +FL    +L   +  
Sbjct: 528 --TVVNMRFVKPFDEALVLEMAKSHDSFVTVEENVIAGGAGSAINEFLQAQRILMPALN- 584

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 705
             + LPDR+++ GS  + L+  GL    I A++
Sbjct: 585 --IGLPDRFVEQGSREELLSLCGLDTKGILASI 615


>gi|240949320|ref|ZP_04753663.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor
           NM305]
 gi|240296271|gb|EER46920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus minor
           NM305]
          Length = 617

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/635 (47%), Positives = 409/635 (64%), Gaps = 32/635 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L+ LADELRA ++  VS++ GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSKINSPEDLRLLNKEQLQPLADELRAYLLECVSQSSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD++ T+RQ DG+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQIKTIRQKDGIHPFPWREESIYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDGA+TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+++ S      +R+ +K +  ++   +     K +E+ +G+I 
Sbjct: 185 N--------VGALNNHLAQIFSGSLYTTVRDGSKKILDKV-PTIKNFMKKSEEHMKGVIF 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+++LV  L  ++  K  GP  +H+ T+KG+GY  AE  
Sbjct: 236 SPESTLFEELGFNYIGPVDGHNIEELVKTLSNMRELK--GPQFLHIRTKKGKGYTPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDPA+G Q   S    +Y+  F   L   A  D  ++ I  AM  G+G+  
Sbjct: 294 PIGFHGVPKFDPASG-QLPKSKNVPTYSDIFGNWLCEMAAQDAKLIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFAAGLA  G KP  AIYSSF+QRAYDQ++HDV +Q LPV
Sbjct: 353 FSKRFPEQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD+++M C+PNM +M PSDE E+  M+ TA  + + P   
Sbjct: 413 IFAIDRAGIVGADGQTHQGAFDLSYMRCIPNMTIMTPSDENEMRQMLYTAYTL-NTPVAV 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  GVEL P N   PL +GKGRIL +G++VA+L +G      L   A + +    
Sbjct: 472 RYPRGNAQGVELQPMN---PLTIGKGRILRKGKKVAILNFG-----ALLNEAKIVAEQYD 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD  LI  LA+SH+ L+T+EE +I GG GS V ++L   G      K +
Sbjct: 524 YTLVDMRFVKPLDEHLISELAESHDYLVTLEENAIQGGAGSAVNEYLQSIG------KIK 577

Query: 674 PLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 705
           PL+   +PD ++   +  +     GL  + IA  +
Sbjct: 578 PLMILGIPDYFVPQATQQEAYEMLGLNSTGIAKAI 612


>gi|387769442|ref|ZP_10125705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella bettyae CCUG
           2042]
 gi|386906751|gb|EIJ71476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pasteurella bettyae CCUG
           2042]
          Length = 617

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/636 (47%), Positives = 415/636 (65%), Gaps = 27/636 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L Q+ +ELR  ++ +VS+T GHL S LG +ELTVALHYVF 
Sbjct: 5   PLLSLINSPDDLRLLNKEQLPQVCNELREYLLESVSQTSGHLASGLGTVELTVALHYVFK 64

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+M T+RQ +G+  F  R ESE+D    GHSSTSIS
Sbjct: 65  TPFDQLIWDVGHQAYPHKILTGRRDRMSTIRQKNGIHPFPWREESEFDVLSVGHSSTSIS 124

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+A+  + +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 125 AGLGIAIAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 183

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +   I  P+     K +E+ +G+IS
Sbjct: 184 N--------VGALNNHLARIFSGTLYSSLRDGSKKILDNI-PPIKNFMKKTEEHVKGVIS 234

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+++L+A L  ++  K  GP  +H+ T+KG+GY  AE+ 
Sbjct: 235 PV-STLFEELGFNYIGPIDGHNIEELIATLGNMRTLK--GPQFLHIRTKKGKGYQPAEQD 291

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFD  TG+  KS+A+  +Y+  F + L   AE +  ++AI  AM  G+G+  
Sbjct: 292 PIGFHGVPKFDYHTGELPKSNAKP-TYSQVFGQWLCETAEHNPKLMAITPAMREGSGMVE 350

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F  RFP + FDV IAEQHAVT AAGLA  G KP  AIYS+F+QRAYDQV+HDV +Q LPV
Sbjct: 351 FSNRFPEQYFDVAIAEQHAVTLAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPV 410

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADGPTH G+FD++FM C+PN+V+M PSDE E   M+ T      +P+  
Sbjct: 411 LFAIDRAGIVGADGPTHQGAFDISFMRCIPNLVIMTPSDENECRLMLHTGYHC-GKPAAV 469

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN IGVEL   ++   LE+GK + + EG+++A+L +GT +   LA +  L +    
Sbjct: 470 RYPRGNAIGVELESLHE---LEIGKSKTIREGKKIAILNFGTLLPDALAVAEKLNA---- 522

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KPLD   I  LA++H+ L+T+EE +I GG GS V + L    +    V   
Sbjct: 523 -TVVDMRFVKPLDTTRINELAQTHDTLVTLEENAIQGGAGSAVSEIL---NIQQHKVNVL 578

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            L LPD++I  G+  + LA+  L    I   + N L
Sbjct: 579 HLGLPDQFISQGTQPEVLAELELNSDGIEKQIKNFL 614


>gi|229844083|ref|ZP_04464224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           6P18H1]
 gi|229813077|gb|EEP48765.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           6P18H1]
          Length = 625

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 298/638 (46%), Positives = 414/638 (64%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  IN P  ++ L+  +L QL  ELRA ++ +VS+T GHL S LG +ELTVALHYV+ 
Sbjct: 9   PLLSLINSPEDLRLLNKDQLPQLCQELRAYLLESVSQTSGHLASGLGTVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRR++M T+RQ  G+  F  R ESE+D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRREQMSTIRQKGGIHPFPWREESEFDVLSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV  + +      V VIGDG++TAG A+EA+N+AG L +DM+VILNDN ++S+  
Sbjct: 129 AGLGIAVAAERENASRKTVCVIGDGSITAGMAFEALNHAGALHTDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      LR+ +K +  ++  P+     K +E+ +G++ 
Sbjct: 188 N--------VGALNNHLARIFSGSLYSTLRDGSKKILDKV-PPIKNFMKKTEEHMKGVMF 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGPVDGHN+++LVA L  ++N K  GP  +H+ T+KG+GY  AEK 
Sbjct: 239 SPESTLFEELGFNYIGPVDGHNIEELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKD 296

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +HGV KFDP +G+  K++++  +Y+  F + L   AE D  ++ I  AM  G+G+  
Sbjct: 297 PIGFHGVPKFDPISGELPKNNSKP-TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVE 355

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFP + FDV IAEQHAVTFA GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV
Sbjct: 356 FSQRFPKQYFDVAIAEQHAVTFATGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPV 415

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM++M PSDE E   M+ T      +P+  
Sbjct: 416 LFAIDRAGIVGADGATHQGAFDLSFMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN +GV+L P      L +GK R++  G+++A+L +GT + S L AS  L +    
Sbjct: 475 RYPRGNAVGVKLNPLEM---LPIGKSRLIRGGQKIAILNFGTLLPSALEASEKLNA---- 527

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KP+D  +I  LA++H+ L+T+EE +I GG GS V + L   G     ++  
Sbjct: 528 -TVVDMRFVKPIDIEMINVLAQTHDYLVTLEENAIQGGAGSAVSEVLNSSGKSTALLQ-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I   +  + L   GL    I   + N + +
Sbjct: 585 -LGLPDYFIPQATQQEALEDLGLDTKGIEEKIINFIAK 621


>gi|114776788|ref|ZP_01451831.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mariprofundus ferrooxydans
           PV-1]
 gi|114552874|gb|EAU55305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mariprofundus ferrooxydans
           PV-1]
          Length = 620

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/636 (47%), Positives = 411/636 (64%), Gaps = 23/636 (3%)

Query: 76  LLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNA 135
           LL++I+    +K L   +L +LA ++R  +I  ++  GGHLG+ LGV+ELT+ALHY+ N+
Sbjct: 5   LLNSIHGTADLKRLRPDQLPELASQMRHYLIETLAPIGGHLGAGLGVVELTIALHYLLNS 64

Query: 136 PKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISA 195
           P+D+I+WDVGHQ YPHKILTGR   M  +RQ  GL GFTKR+ES++D FG GH+STSISA
Sbjct: 65  PRDKIIWDVGHQAYPHKILTGRLPGMPGIRQYGGLCGFTKRAESDHDPFGAGHASTSISA 124

Query: 196 GLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA 255
             GMAVGRDL  + + VVAVIGDGA+T G A+EAMN+AG  ++ ++VILNDN+    P  
Sbjct: 125 AYGMAVGRDLSHQDHQVVAVIGDGALTGGMAFEAMNHAGGNNNKLLVILNDNEMSIAPN- 183

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISG 315
                   VGA+SS L+R+ S R   + ++ AK + +++ G + + A +V+E+ +GMI+ 
Sbjct: 184 --------VGAMSSYLARIISGRSYTQAKDTAKRILEKLPGAL-DAAKRVEEHVKGMITP 234

Query: 316 SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAA 375
              TLFEE+G  YIGPVDGH+ D L+  L+    ++  GP L+HVVT KG G+  AE+  
Sbjct: 235 G--TLFEEMGFRYIGPVDGHDFDHLLPTLQNC--SRLNGPTLLHVVTRKGLGFSPAEEDP 290

Query: 376 DKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLF 435
           + +HG+  +D  TG+ FKSS +  SYT  FA+ L   A+ D  VVAI AAM GGTGL  F
Sbjct: 291 ETWHGLGPYDVKTGEPFKSSGQAASYTQVFADMLADMADADDRVVAITAAMPGGTGLTRF 350

Query: 436 LRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVR 495
             R P RCFDVGIAEQHAVTFA GLA  G +P+ AIYS+FMQRAYDQ++HD+ +Q LPV 
Sbjct: 351 AARHPDRCFDVGIAEQHAVTFAGGLAASGKRPYVAIYSTFMQRAYDQIIHDICIQNLPVT 410

Query: 496 FAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR 555
           F +DRAG+VGADG TH G FD+ FM  LPNM VMAP DEAEL  M+ T+  ID  P   R
Sbjct: 411 FCLDRAGIVGADGATHTGMFDLAFMRNLPNMTVMAPKDEAELRRMLVTSLTIDG-PVAIR 469

Query: 556 YPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLES-NGLR 614
           YPRG+G GV +   +   PL VG   +L EG+   ++  G+ V   L A   L S +G  
Sbjct: 470 YPRGHGYGVSIEDSS---PLPVGHAEVLTEGDSGLVIAVGSRVHDALQAVETLRSEHGRA 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWR 673
           +T+ + RF KPLD   I    KS + LI VEEG + GG G  +     Q G       + 
Sbjct: 527 MTLLNLRFIKPLDEQAIMIHLKSGQPLIIVEEGVAAGGAGQQIAVLALQHGWHG---PFA 583

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 709
            + +PD +  HG+ A+ L   GL  + I + +  ++
Sbjct: 584 HIAMPDAFPAHGTQAEILRDLGLDAAGILSRLRQLI 619


>gi|152999875|ref|YP_001365556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS185]
 gi|217974161|ref|YP_002358912.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS223]
 gi|373948751|ref|ZP_09608712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS183]
 gi|386325408|ref|YP_006021525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica BA175]
 gi|166201536|sp|A6WL04.1|DXS_SHEB8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782084|sp|B8EAU7.1|DXS_SHEB2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|151364493|gb|ABS07493.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS185]
 gi|217499296|gb|ACK47489.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS223]
 gi|333819553|gb|AEG12219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica BA175]
 gi|373885351|gb|EHQ14243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS183]
          Length = 622

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 312/639 (48%), Positives = 410/639 (64%), Gaps = 27/639 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P+L   N P  ++ L    L Q+ADELR  ++ +V  + GH  S LG +ELTVALHYV+N
Sbjct: 9   PVLAQANTPNELRQLPQALLPQVADELREFLLKSVGISSGHFASGLGTVELTVALHYVYN 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P DR++WDVGHQ YPHKILTGRRDKMHT+RQ DGL  F  R ESEYD F  GHS TSIS
Sbjct: 69  TPFDRLIWDVGHQAYPHKILTGRRDKMHTIRQKDGLHPFPWREESEYDTFSVGHSGTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           A L MA+  + +     VVAVIGDGAMT G  +EAMN+AG L +DM+V+LNDN ++S+  
Sbjct: 129 AALAMAIAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP-MHELAAKVDEYARGMI 313
                    VGAL++ L++L S R    LRE  K V K  G P + E+A + +E+ +GM+
Sbjct: 188 N--------VGALNNHLAQLMSGRFYTTLREGGKKVLK--GMPVIKEMAKRTEEHLKGMV 237

Query: 314 SGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEK 373
                TLFEELG  YIGP+DGH+VD LV  +  ++N K  GP ++H++T+KGRGY  AEK
Sbjct: 238 VPG--TLFEELGFNYIGPIDGHDVDALVETMRNMRNLK--GPQVLHIMTKKGRGYEPAEK 293

Query: 374 AADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLN 433
               +H V KFDP+  K+  +     +++  F + L   AE D+ V+AI  AM  G+G+ 
Sbjct: 294 DPIGWHAVPKFDPSLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLAITPAMREGSGMV 353

Query: 434 LFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLP 493
            F +RFP + FD  IAEQHAVT +AG ACEG KP  AIYS+F+QRAYDQ++HDV LQ+LP
Sbjct: 354 EFSQRFPKQYFDAAIAEQHAVTLSAGFACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLP 413

Query: 494 VRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSC 553
           V FA+DR G+VGADGPTH G+FD++FM C+PNMV+MAPSDE E   M+ T    D  PS 
Sbjct: 414 VLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSA 473

Query: 554 FRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGL 613
            RYPRG   G         +P  +GKG I   G+R+A+L +GT     L ASAL  +  L
Sbjct: 474 VRYPRGCATGATQVEAMTALP--IGKGVIKRVGKRIAILNFGT-----LLASALTAAESL 526

Query: 614 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKW 672
             TV D RF KPLD  L++ +A++HEVL+TVEE +I GG G+ V++ L +  +    ++ 
Sbjct: 527 DATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQKLRMPKAVLQ- 585

Query: 673 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
             + LPD +I HGSP +      L    I A +   L Q
Sbjct: 586 --IGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYLAQ 622


>gi|377648348|gb|AFB70978.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Mitragyna
           speciosa]
          Length = 313

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/313 (89%), Positives = 294/313 (93%)

Query: 142 WDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAV 201
           WDVGHQ+YPHKILTGRR KM T+RQTDGLSGFTKRSESEYDCFG GHSSTSISAGLGMAV
Sbjct: 1   WDVGHQSYPHKILTGRRYKMPTLRQTDGLSGFTKRSESEYDCFGAGHSSTSISAGLGMAV 60

Query: 202 GRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPI 261
           GRDLKGRKN+VVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+
Sbjct: 61  GRDLKGRKNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPV 120

Query: 262 PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLF 321
           PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGG +HELAAKVDEYARG+ISGSGSTLF
Sbjct: 121 PPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGLISGSGSTLF 180

Query: 322 EELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV 381
           EELG YYIGPVDGH++DDLVAIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV
Sbjct: 181 EELGFYYIGPVDGHSIDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV 240

Query: 382 AKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPT 441
            KFDPATGKQFKSS +TQSYTTYFAEAL+AEAE DKDVVAIHAAMG    +  F   FP 
Sbjct: 241 VKFDPATGKQFKSSGKTQSYTTYFAEALVAEAEADKDVVAIHAAMGRWNRVEPFPSSFPN 300

Query: 442 RCFDVGIAEQHAV 454
           + FDVGIAEQHAV
Sbjct: 301 KMFDVGIAEQHAV 313


>gi|268592057|ref|ZP_06126278.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rettgeri DSM
           1131]
 gi|291312450|gb|EFE52903.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rettgeri DSM
           1131]
          Length = 621

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/638 (47%), Positives = 408/638 (63%), Gaps = 26/638 (4%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           P L     P  ++ L    L +L DELR  ++ +V ++ GH  S LG +ELTVALHYV+ 
Sbjct: 9   PTLALAETPDELRLLPKESLPKLCDELRQFLLSSVGRSSGHFASGLGAVELTVALHYVYK 68

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D ++WDVGHQ YPHKILTGRRD++ T+RQ +GL  F  R ESEYD    GHSSTSIS
Sbjct: 69  TPFDNLVWDVGHQAYPHKILTGRRDRIDTIRQKNGLHPFPWREESEYDILSVGHSSTSIS 128

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLGMA+  + + +    V VIGDGA+TAG A+EAMN+AG    DM+VILNDN ++S+  
Sbjct: 129 AGLGMAIAAEKEKQNRKTVCVIGDGAITAGMAFEAMNHAGDAAPDMLVILNDN-EMSISE 187

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+ L S +    LRE  K V   +  P+ EL  K +E+ +GM+ 
Sbjct: 188 N--------VGALNNHLAHLLSGKLYTTLREGGKKVFSNMP-PIKELLKKTEEHIKGMVV 238

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
               T+FEELG  YIGPVDGH+V  LV  L+ +++ K  GP  +H++T+KGRGY  AEK 
Sbjct: 239 PG--TMFEELGFNYIGPVDGHDVVALVQTLKNMRDLK--GPQFLHIMTKKGRGYEPAEKD 294

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              +H V KFDP+T    KS     +++  F + L  EA+ D  ++AI  AM  G+G+  
Sbjct: 295 PISWHAVPKFDPSTFTLPKSKETGPTFSKIFGDWLCEEAKDDSKLMAITPAMREGSGMVR 354

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F + FP + FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QR YDQV+HDV +QK+PV
Sbjct: 355 FSKEFPEQYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRGYDQVIHDVAIQKVPV 414

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH GSFD++F+ C+P MV+MAPSDE E   M+ T     D P   
Sbjct: 415 MFAIDRAGIVGADGQTHQGSFDISFLRCIPTMVIMAPSDENECRQMLHTGYHYQDGPCAV 474

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRG G G EL P +   PL +GKG +  +GE+VA+L +GT     L + AL+ +  L 
Sbjct: 475 RYPRGTGTGAELQPLS---PLPIGKGIVRRQGEKVAILCFGT-----LLSHALVAAEQLN 526

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            TV D RF KPLD AL+  +A +H+VL+T+EE +I GG GS V +FL  +  +  T+   
Sbjct: 527 ATVVDMRFVKPLDEALVLEMANTHDVLVTLEENAIMGGAGSGVNEFLMHEKKIIPTLN-- 584

Query: 674 PLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 711
            L LPD +I  G+  + +A+ GL  + I  ++ N L +
Sbjct: 585 -LGLPDYFISQGTQEELIAELGLDSTGIVNSINNYLAK 621


>gi|33151663|ref|NP_873016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus ducreyi
           35000HP]
 gi|41016951|sp|Q7VNP7.1|DXS_HAEDU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33147884|gb|AAP95405.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus ducreyi 35000HP]
          Length = 617

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 303/626 (48%), Positives = 404/626 (64%), Gaps = 32/626 (5%)

Query: 75  PLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFN 134
           PLL  I+ P  ++ L   +L  LA+ELR  ++ +VS+T GHL S LGV+ELTVALHYV+ 
Sbjct: 6   PLLSQIDSPEDLRLLGKEDLSALANELRTYLLDSVSQTSGHLASGLGVVELTVALHYVYQ 65

Query: 135 APKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSIS 194
            P D+++WDVGHQ YPHKILTGRRD+MHT+RQ +G+  F  R ES YD    GHSSTSIS
Sbjct: 66  TPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESPYDVLSVGHSSTSIS 125

Query: 195 AGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPT 254
           AGLG+AV    +      V VIGDGA+TAG A+EAMN+AG L +DM+VILNDN ++S+  
Sbjct: 126 AGLGIAVAAQKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDN-EMSISE 184

Query: 255 ATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS 314
                    VGAL++ L+R+ S      +R+ +K V  ++   +     K +E+ +G+I 
Sbjct: 185 N--------VGALNNHLARIFSGSLYTSMRDGSKKVLDKV-PTIKNFMKKSEEHMKGVIF 235

Query: 315 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 374
              STLFEELG  YIGP+DGHN+++LV  L  ++  K  GP  +HV T+KG+GY  AE  
Sbjct: 236 SPDSTLFEELGFNYIGPIDGHNIEELVKTLTNMRELK--GPQFLHVRTKKGKGYEPAEND 293

Query: 375 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 434
              YHGV +FDPA+GK    S    +Y+  F   L   AE D+ ++ I  AM  G+G+  
Sbjct: 294 PISYHGVPRFDPASGK-LPQSKIVPTYSDIFGNWLCEMAENDEKIIGITPAMREGSGMVE 352

Query: 435 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 494
           F +RFPT+ FDV IAEQHAVTFAAGLA  G KP  AIYS+F+QRAYDQ++HD+ +Q LPV
Sbjct: 353 FSKRFPTQYFDVAIAEQHAVTFAAGLAIAGYKPVVAIYSTFLQRAYDQLIHDIAIQNLPV 412

Query: 495 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 554
            FA+DRAG+VGADG TH G+FD++FM C+PNM +M P+DE E+  M+ TA  +   P+  
Sbjct: 413 IFAIDRAGVVGADGQTHQGAFDLSFMRCIPNMTIMCPADENEMHQMLYTAYKM-QTPTAI 471

Query: 555 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 614
           RYPRGN  G+ L P  +   L VGK RI+ +G++VA+L +G  +    A    +  N   
Sbjct: 472 RYPRGNARGIALQPMAE---LAVGKARIIHQGKKVAILNFGALLSE--AQEVAISHN--- 523

Query: 615 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWR 673
            T+ D RF KPLD  LI  LA SH +L+T+EE +I GG GS V ++L Q G      K +
Sbjct: 524 YTLVDMRFVKPLDKTLISELADSHSLLVTLEENAIQGGAGSAVNEYLQQIG------KIK 577

Query: 674 PLV---LPDRYIDHGSPADQLAQAGL 696
           PLV   LPD +I   +  +  A  GL
Sbjct: 578 PLVLIGLPDMFIPQSTQQESYADFGL 603


>gi|90415577|ref|ZP_01223511.1| deoxyxylulose-5-phosphate synthase [gamma proteobacterium HTCC2207]
 gi|90332900|gb|EAS48070.1| deoxyxylulose-5-phosphate synthase [marine gamma proteobacterium
           HTCC2207]
          Length = 661

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 306/655 (46%), Positives = 415/655 (63%), Gaps = 60/655 (9%)

Query: 71  RPPTPLLDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALH 130
           RP TPLLDT++ P  +++L   +L+ LADELRA +++ V KTGGH G+ LGV ELT+ALH
Sbjct: 12  RPQTPLLDTVSAPADLRHLDGAQLETLADELRAFILYCVGKTGGHFGAGLGVTELTIALH 71

Query: 131 YVFNAPKDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSS 190
           +VFN P DR++WDVGHQTYPHKILTGRR++M +MRQ DGLSGF KRSES++D FG GHSS
Sbjct: 72  HVFNTPGDRLVWDVGHQTYPHKILTGRREQMLSMRQKDGLSGFPKRSESDFDTFGVGHSS 131

Query: 191 TSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQV 250
           TSISA LGMA+     G +   VA++GDGAMTAG A+EA+N+A ++D +++V+LNDN Q+
Sbjct: 132 TSISAALGMAMASSQLGEERRAVAIMGDGAMTAGMAFEALNHASHVDKNLLVVLNDN-QM 190

Query: 251 SLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH--ELAAKVDEY 308
           S+           VG LS+  S+L S+R   + RE  K   K + G  H      + +EY
Sbjct: 191 SISRN--------VGGLSTYFSKLWSSRIYTQFREGGK---KVLSGMPHATNFVRRTEEY 239

Query: 309 ARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGY 368
            + M+  S +T+FEELG YY+GP+DGH++  LV  L ++K  K  G VL+H++T KG+G+
Sbjct: 240 MKSMV--SPATIFEELGFYYVGPIDGHDLPLLVETLRKLKEIK--GAVLLHIITHKGKGF 295

Query: 369 PYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT------------------------- 403
             AE     YH + K +P   KQ   +A   S                            
Sbjct: 296 APAENDPVGYHALNKIEP---KQSVKAAEITSVAATTPQSKPQSKPQPKPQPKPQPKPKY 352

Query: 404 --YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLA 461
              F + L   AE D  +V I  AM  G+G+N F  RFP R  DV IAEQHAVT AAG+A
Sbjct: 353 QKVFGDWLCDMAEQDSRLVGITPAMCDGSGMNEFAERFPERFEDVAIAEQHAVTLAAGMA 412

Query: 462 CEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMA 521
           CEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DG TH G++D++++ 
Sbjct: 413 CEGSKPVVAIYSTFLQRAYDQLIHDVAIQNLDVLFALDRAGLVGEDGATHAGAYDISYLR 472

Query: 522 CLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGR 581
           C+PNMV+MAPSDE E   ++ T   +   P+  RYPRG G G  +      +PL  GKG 
Sbjct: 473 CIPNMVIMAPSDENETRQLLYT-GYMHAGPAAVRYPRGTGPGAVIEQQMTALPL--GKGL 529

Query: 582 ILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVL 641
           +  +G  VA+L +GT + + L  +  L +     +VAD RF KP+D  LIR LA +H++L
Sbjct: 530 MARKGAGVAILNFGTLLTTGLEVAETLNA-----SVADMRFVKPIDEQLIRDLAGTHQLL 584

Query: 642 ITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 695
           +T+EE S  GG GS V +FLA+ G++   +    L LPD ++DHG+ + QL   G
Sbjct: 585 VTLEENSTAGGAGSAVSEFLAEQGIVMPVLH---LGLPDIFVDHGNHSQQLESIG 636


>gi|440680572|ref|YP_007155367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
           7122]
 gi|428677691|gb|AFZ56457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
           7122]
          Length = 636

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 297/639 (46%), Positives = 414/639 (64%), Gaps = 25/639 (3%)

Query: 77  LDTINYPIHMKNLSIRELKQLADELRADVIFNVSKTGGHLGSSLGVIELTVALHYVFNAP 136
           L  I +P  +  LSIR+L+Q+A ++R   +  V+ TGGHLG  LGV+ELT+AL+   +  
Sbjct: 3   LSEITHPNQLHGLSIRQLQQIAHQIRDKHLQTVAATGGHLGPGLGVVELTLALYQTLDLD 62

Query: 137 KDRILWDVGHQTYPHKILTGRRDKMHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAG 196
           +D+++WDVGHQ YPHK+LTGR    HT+RQ DG++G+ KR E+++D FG GH+STSISA 
Sbjct: 63  RDKVIWDVGHQAYPHKLLTGRYSDFHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAA 122

Query: 197 LGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTA 255
           LGMA+ RDLKG K   VAVIGDGA+T G A EA+N+AG+L  ++++V+LNDN+    P  
Sbjct: 123 LGMALARDLKGEKFKAVAVIGDGALTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN- 181

Query: 256 TLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGM--- 312
                   VGA+   L++++ + P++ +++  +   K I      L+ ++D    GM   
Sbjct: 182 --------VGAIPRYLNKMRLSPPVQFIKDNFEEQVKHIPFVGESLSPELDRIKEGMKRL 233

Query: 313 -ISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 371
            +   G+ +FEELG  Y+GPVDGHN+++L+A  ++    + TGPVL+HVVT KG+GY  A
Sbjct: 234 AVPKVGA-VFEELGFTYMGPVDGHNLEELIATFQQAH--QMTGPVLVHVVTTKGKGYEIA 290

Query: 372 EKAADKYHGVAKFDPATGKQFKSSA-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGT 430
           EK    YH    F+ +TGK   S+  +  +Y   F+  L+  AE +  +V I AAM  GT
Sbjct: 291 EKDQVGYHAQNPFNVSTGKAIPSNKPKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGT 350

Query: 431 GLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQ 490
           GL+    + P +  DVGIAEQHA+T AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q
Sbjct: 351 GLDKLQTKLPNQYIDVGIAEQHAITLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQ 410

Query: 491 KLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDR 550
            LPV F +DRAG+VGADGPTH G +D+ ++ C+PNMVVMAP DEAEL  MV T       
Sbjct: 411 NLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVVMAPKDEAELQRMVVTGINHTSG 470

Query: 551 PSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLE 609
           P   R+PRGNG GV  P   +G  PLE+GKG IL +G+ V ++GYGT V   + A+ +L 
Sbjct: 471 PISMRFPRGNGHGV--PLMEEGWEPLEIGKGEILRQGDDVLIVGYGTMVYPGMQAAEILS 528

Query: 610 SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDG 668
            +G+  TV +ARF KPLD  LI  LAK    ++T+EEG + GGFGS V + L    +L  
Sbjct: 529 EHGIEATVINARFVKPLDTELILPLAKQIGRVVTLEEGCLMGGFGSAVAEALMDADVL-- 586

Query: 669 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 707
            V  + + +PD  +DH +P    A  GL+   IA TV  
Sbjct: 587 -VPVKRIGVPDILVDHATPDQSFAALGLSSRQIAETVLE 624


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,629,585,068
Number of Sequences: 23463169
Number of extensions: 518483199
Number of successful extensions: 1301234
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8189
Number of HSP's successfully gapped in prelim test: 7461
Number of HSP's that attempted gapping in prelim test: 1256985
Number of HSP's gapped (non-prelim): 21697
length of query: 723
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 573
effective length of database: 8,839,720,017
effective search space: 5065159569741
effective search space used: 5065159569741
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)