Your job contains 1 sequence.
>004928
MKRGKDDEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPTQRFSTGVLPLNPSN
SSSLVPPVSSSQGNGLERNLLFAHSVHPSTPTHLDEKCHSDQPAGATLNTHLQHHEQSKK
VSEEDDFAVPIFDQAGMGQCHGKSQSDVDKGNLSPFNPSNTRKSTKFQNACDKNPKRSSS
SSISLRQQGGHVCQENPKICISIGNFPAKSSVNLSIREKIDGIVKEVSASPNQEYREISG
SDFSRINDSDASLRLESGAGLPPNGCCRYDDVDSTGDFQKEVVLQPRGDTHSTEDCGHRS
GLHNDSRYHVDKTCGSLQLGSGDKSDDVSETSMVDSMSGVDMSPDDVVGIIGHKHFWKAR
RAIVNQQRVFAVQVFELHRLIKVQQLIAESPDVLLEESACLGKPSLKASPAKKLPLEYVV
KPLPHSVKRKVDSEKPNHKIESSAENAVGKTSLSSVKNGSQPSNYGPYCANQPPPMEATN
SRMAHWCFHQSPGQQWLIPVMSPSEGLIYKPYPGPGFMGTVCGGGCSPFGPAPLTGNFMH
PDYGITSPIPLQGNGVMPGAHLVGHGYFPPYGMPVMNPSVSGSAAEQKNQFAVPGSRDQF
SQGDANFYMPQESSCNVPAQKNGAVPPVRQFQASKDTELQGSTASSPGERVRGDGMGHAA
EGTDALQVSTVSPVVQEAAPQPHDADQPTKVIKVVPHNPRSATESVARIFQSIQEERKQY
DSI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004928
(723 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043520 - symbol:ELF3 "EARLY FLOWERING 3" spec... 782 1.0e-77 1
TAIR|locus:2094711 - symbol:AT3G21320 "AT3G21320" species... 167 2.0e-22 3
>TAIR|locus:2043520 [details] [associations]
symbol:ELF3 "EARLY FLOWERING 3" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0009909 "regulation
of flower development" evidence=RCA;IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0009585 "red, far-red light
phototransduction" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA;IMP] [GO:0010031 "circumnutation" evidence=IMP]
[GO:0048573 "photoperiodism, flowering" evidence=RCA;IMP]
[GO:0010119 "regulation of stomatal movement" evidence=IMP]
GO:GO:0009737 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0010119 GO:GO:0007623 GO:GO:0009409
GO:GO:0003700 GO:GO:0006351 GO:GO:0009826 GO:GO:0009585
GO:GO:0048573 GO:GO:0009909 GO:GO:0010031 EMBL:AC004747
EMBL:AC005395 EMBL:Y11994 EMBL:AY136385 EMBL:BT000185
IPI:IPI00523720 IPI:IPI00525552 PIR:T02630 PIR:T52634
RefSeq:NP_180164.1 UniGene:At.44999 UniGene:At.48519 STRING:O82804
PRIDE:O82804 EnsemblPlants:AT2G25930.1 GeneID:817134
KEGG:ath:AT2G25930 TAIR:At2g25930 eggNOG:NOG299739
HOGENOM:HOG000241683 InParanoid:O82804 KO:K12125 OMA:TEANQPS
PhylomeDB:O82804 ProtClustDB:CLSN2913009 Genevestigator:O82804
GermOnline:AT2G25930 Uniprot:O82804
Length = 695
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 242/663 (36%), Positives = 324/663 (48%)
Query: 100 SDQPAGATLNTHLQHHEQSKKVSEEDDFA--VPIFDQAGMGQCHGKSQSDVDKGNLSPFN 157
S QP G N +QH + S + F + + H + + ++ + +
Sbjct: 71 SSQPCGVERNLSVQHLDSSAANQATEKFVSQMSFMENVRSSAQHDQRKMVREEEDFAVPV 130
Query: 158 PSNTRKST---KFQNACDKN---PKRXXXXXXXLRQQGGHVCQENPKICISIGNFP-AKS 210
N+R+S + ++ +K P +R Q + +C++ + P +
Sbjct: 131 YINSRRSQSHGRTKSGIEKEKHTPMVAPSSHHSIRFQEVNQTGSKQNVCLATCSKPEVRD 190
Query: 211 SVNLSIREKIDGIVKEVSASPNQEYR-EISGSDFSRINDSDASLRLESGAGL-PPNGCCR 268
V + R G V + S +E E S S R+ND +ASLR ES L G R
Sbjct: 191 QVKANARS--GGFVISLDVSVTEEIDLEKSASSHDRVNDYNASLRQESRNRLYRDGGKTR 248
Query: 269 YDDVDSTGDFQKEVVLQPRGDTHSTEDCGHRSGLHNDSRYHVDKTCGSLQLGSGDKSDDV 328
D D+ + + HS E G + ND Y + C SLQ + + SDDV
Sbjct: 249 LKDTDNGAESHLAT------ENHSQEGHGSPEDIDNDREYSKSRACASLQQINEEASDDV 302
Query: 329 SETXXXXXXXXXXXXXXXXXXIIGHKHFWKARRAIVNQQRVFAVQVFELHRLIKVQQLIA 388
S+ I+G K FW+AR+AI NQQRVFAVQ+FELHRLIKVQ+LIA
Sbjct: 303 SDDSMVDSISSIDVSPDDVVGILGQKRFWRARKAIANQQRVFAVQLFELHRLIKVQKLIA 362
Query: 389 ESPDVLLEESACLGKPSLKASPAKKL-PLEYVVKP-LPHSV-KRKVDSEKPN-HKIESSA 444
SPD+LL+E + LGK S K+ P KKL P E++VKP LPH V K++ DSEK + HK+ESSA
Sbjct: 363 ASPDLLLDEISFLGKVSAKSYPVKKLLPSEFLVKPPLPHVVVKQRGDSEKTDQHKMESSA 422
Query: 445 ENAVGKTSLSSVKNGSQPSNYGPYCANQPPPMEATNSRMAHWCFHQSP---G--QQWLIP 499
EN VG+ LS+ + Q SNY P+ AN PP A N +CF P G QQWLIP
Sbjct: 423 ENVVGR--LSN-QGHHQQSNYMPF-ANNPPASPAPNG----YCFPPQPPPSGNHQQWLIP 474
Query: 500 VMSPSEGLIYKPYPGPGFMGTVCGGGCSPFGPAPLTGNFMHPDYGITSPIPLQGNGVMPG 559
VMSPSEGLIYKP+PG G GG + P P+ HP G P
Sbjct: 475 VMSPSEGLIYKPHPGMAHTGHY-GGYYGHYMPTPMVMPQYHPGMGFPPP----------- 522
Query: 560 AHLVGHGYFPPYGM-P-VMNPSVSGSAA------EQKNQFAVPGSRDQFSQGDANFYMPQ 611
G+GYFPPYGM P +MNP S EQ NQF PG+ Q Q
Sbjct: 523 ----GNGYFPPYGMMPTIMNPYCSSQQQQQQQPNEQMNQFGHPGNLQNTQQ-------QQ 571
Query: 612 ESSCNVPAQKNGAVPPVRQFQASKDTELQGSTASSPG--ERVRGDGMGH--AAEGTDA-- 665
+ S N PA + P + + ++ + QGST SSP + + G AA D+
Sbjct: 572 QRSDNEPAPQQQQ-QPTKSYPRARKSR-QGSTGSSPSGPQGISGSKSFRPFAAVDEDSNI 629
Query: 666 -----LQVSTVSPVVQEAAPQP-HDADQPTKVIKVVPHNPRSATESVARIFQSIQEERKQ 719
++T + + Q D T+VIKVVPHN + A+E+ ARIFQSIQEERK+
Sbjct: 630 NNAPEQTMTTTTTTTRTTVTQTTRDGGGVTRVIKVVPHNAKLASENAARIFQSIQEERKR 689
Query: 720 YDS 722
YDS
Sbjct: 690 YDS 692
Score = 360 (131.8 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 90/242 (37%), Positives = 125/242 (51%)
Query: 1 MKRGKDDEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPTQRFST-GXXXXXXX 59
MKRGKD+EKI+ PMFPRLHVND +KGGPRAPPRNKMALYEQLSIP+QRF G
Sbjct: 1 MKRGKDEEKILEPMFPRLHVNDADKGGPRAPPRNKMALYEQLSIPSQRFGDHGTMNSRSN 60
Query: 60 XXXXXXXXXXXXQGNGLERNLLFAHSVHPSTPTHLDEKCHSDQPAGATLNTHLQHHEQSK 119
Q G+ERNL H + S EK S + + QH +Q K
Sbjct: 61 NTSTLVHPGPSSQPCGVERNLSVQH-LDSSAANQATEKFVSQMSFMENVRSSAQH-DQRK 118
Query: 120 KVSEEDDFAVPIFDQAGMGQCHGKSQSDVDKGNLSPFNPSNTRKSTKFQNACDKNPKRXX 179
V EE+DFAVP++ + Q HG+++S ++K +P ++ S +FQ K+
Sbjct: 119 MVREEEDFAVPVYINSRRSQSHGRTKSGIEKEKHTPMVAPSSHHSIRFQEVNQTGSKQNV 178
Query: 180 XXXXXLRQQGGHVCQENPKICISIGNFPAKSSVNLSIREKIDGIVKEVSASPNQEYREIS 239
+ + ++ K G F S+++S+ E+ID E SAS + + +
Sbjct: 179 CLATCSKPE----VRDQVKANARSGGFVI--SLDVSVTEEID---LEKSASSHDRVNDYN 229
Query: 240 GS 241
S
Sbjct: 230 AS 231
>TAIR|locus:2094711 [details] [associations]
symbol:AT3G21320 "AT3G21320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 UniGene:At.51217 EMBL:AY800623
IPI:IPI00521745 RefSeq:NP_188769.1 PRIDE:Q5Q0C8
EnsemblPlants:AT3G21320.1 GeneID:821686 KEGG:ath:AT3G21320
TAIR:At3g21320 HOGENOM:HOG000139355 OMA:KRITIPP PhylomeDB:Q5Q0C8
ProtClustDB:CLSN2915655 Genevestigator:Q5Q0C8 Uniprot:Q5Q0C8
Length = 540
Score = 167 (63.8 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 350 IIGHKHFWKARRAIVNQQRVFAVQVFELHRLIKVQQLIAESPDVLLEESACLGKP-SLKA 408
+IG K FWK R ++NQQ++FA QVFELHRLI VQ+++A+SP++ LE K ++++
Sbjct: 245 VIGEKRFWKMRTYMINQQKIFAGQVFELHRLIMVQKMVAKSPNLFLESKLNGVKHGTMRS 304
Query: 409 SPAKKLPLEYVVKPLPHSVKRKVDSEKPNH 438
S + V KP + K V E P H
Sbjct: 305 SHQLAMAASKVRKPNTENHK-PVPEEYPEH 333
Score = 146 (56.5 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 54/167 (32%), Positives = 74/167 (44%)
Query: 566 GYFPPYGMPVMNPSVSGSAAEQKNQFAV--PGSRDQFSQGDANFYMPQESS-------CN 616
G PP M P + E +F V P S F +A + Q + N
Sbjct: 382 GPCPPSSSAFMVPVYGQDSLETPFRFPVSSPFSHSYFPPPNARTTVDQTNPFGQFQRWSN 441
Query: 617 VPAQKNGAVP-PVRQFQASKDTELQGSTASSPGERVRGDGMGHAAEGTDALQVSTVSPVV 675
+ A+P +++ Q S D+++ GSTASSP E+ H E L + P
Sbjct: 442 TSSHMTQAIPFSLKKSQESNDSDIHGSTASSPPEK-------HKLE---VLPLFPTEPTH 491
Query: 676 QEAAPQPHDADQPT-KVIKVVPHNPRSATESVARIFQSIQEERKQYD 721
Q + QP + IK VPHN SA+ES ARIF+ IQEER+ D
Sbjct: 492 Q--TDEYKQKQQPMLRAIKAVPHNSTSASESAARIFRFIQEERRDSD 536
Score = 111 (44.1 bits), Expect = 7.8e-19, Sum P(3) = 7.8e-19
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 492 PGQQWLIPVMSPSEGLIYKPYPGP------GFMGTVCGGGC--SPFGPAPLTGNFMH 540
PG QWL+PV++ S+GL+YKP+PGP FM V G +PF P++ F H
Sbjct: 360 PGNQWLVPVITDSDGLVYKPFPGPCPPSSSAFMVPVYGQDSLETPFR-FPVSSPFSH 415
Score = 73 (30.8 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 5 KDDEK--IMGPMFPRLHVNDTEKGG 27
KD+ K + P+FPR+HVNDT +GG
Sbjct: 5 KDEAKRITIPPLFPRVHVNDTGRGG 29
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 723 679 0.00079 121 3 11 23 0.47 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 616 (65 KB)
Total size of DFA: 373 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.81u 0.09s 65.90t Elapsed: 00:00:03
Total cpu time: 65.81u 0.09s 65.90t Elapsed: 00:00:03
Start: Tue May 21 18:04:34 2013 End: Tue May 21 18:04:37 2013