BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004935
(723 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 172/283 (60%), Gaps = 18/283 (6%)
Query: 427 TNNFER--VLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
TNNF+ ++G+G FG VY G L DG +VA+K +P S+QG ++F+ E+E L H +L
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADI--LSWEGRLRIAIEAAK------- 534
+L+G+CDE LIY++M NGNL+ L G + +SWE RL I I AA+
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRDVKS NILL F KI DFG+S+ E TH+ + GT GY+DPEY+I
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXVVKGTLGYIDPEYFIKG 216
Query: 592 RLTEKSDVYNFGVVLLEIITSKSVIERT--HERIHITQWVSFMLGKGDIESIVDPRLHED 649
RLTEKSDVY+FGVVL E++ ++S I ++ E +++ +W G +E IVDP L +
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276
Query: 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692
S+ K + A+ C++ +S RP+M V+ +L +L ++ +
Sbjct: 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 172/283 (60%), Gaps = 18/283 (6%)
Query: 427 TNNFER--VLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
TNNF+ ++G+G FG VY G L DG +VA+K +P S+QG ++F+ E+E L H +L
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADI--LSWEGRLRIAIEAAK------- 534
+L+G+CDE LIY++M NGNL+ L G + +SWE RL I I AA+
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRDVKS NILL F KI DFG+S+ E TH+ + GT GY+DPEY+I
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXVVKGTLGYIDPEYFIKG 216
Query: 592 RLTEKSDVYNFGVVLLEIITSKSVIERT--HERIHITQWVSFMLGKGDIESIVDPRLHED 649
RLTEKSDVY+FGVVL E++ ++S I ++ E +++ +W G +E IVDP L +
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276
Query: 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692
S+ K + A+ C++ +S RP+M V+ +L +L ++ +
Sbjct: 277 IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 164/291 (56%), Gaps = 25/291 (8%)
Query: 416 QRFSYSNVLRITNNF--ERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYK-QFQAE 471
+RFS + ++NF + +LG GGFG VY G L DGT VAVK L QG + QFQ E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG--EEADILSWEGRLRIA 529
VE++ H+NL L G+C T R L+Y +MANG++ + L E L W R RIA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 530 IEAAK-------------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
+ +A+ +HRDVK+ NILL +F+A + DFGL++ ++ HV +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDXHVXXAV 203
Query: 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTH----ERIHITQWVSFM 632
GT G++ PEY + + +EK+DV+ +GV+LLE+IT + + + + + WV +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMEL 683
L + +E++VD L ++ V + +++A+ C + +RP M++VV L
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 162/292 (55%), Gaps = 25/292 (8%)
Query: 416 QRFSYSNVLRITNNF--ERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYK-QFQAE 471
+RFS + ++NF + +LG GGFG VY G L DG VAVK L QG + QFQ E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG--EEADILSWEGRLRIA 529
VE++ H+NL L G+C T R L+Y +MANG++ + L E L W R RIA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 530 IEAAK-------------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
+ +A+ +HRDVK+ NILL +F+A + DFGL++ ++ HV +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDXHVXXAV 195
Query: 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTH----ERIHITQWVSFM 632
G G++ PEY + + +EK+DV+ +GV+LLE+IT + + + + + WV +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELN 684
L + +E++VD L ++ V + +++A+ C + +RP M++VV L
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 164/309 (53%), Gaps = 30/309 (9%)
Query: 407 KNGSFELKNQRF---SYSNVLRITNNFER--------VLGNGGFGTVYHGYLDGTEVAVK 455
+N S E+ + RF S+ + +TNNF+ +G GGFG VY GY++ T VAVK
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVK 60
Query: 456 ----MLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL-QA 510
M+ ++ + +QF E++++ + H+NL L+G+ +G + L+Y +M NG+L
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 511 LLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLS 560
L + LSW R +IA AA +HRD+KS NILL F AKI+DFGL+
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 561 RTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTH 620
R + + T + + I GT Y+ PE + +T KSD+Y+FGVVLLEIIT ++
Sbjct: 181 RA-SEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 621 E-RIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQV 679
E ++ + + IE +D +++ D D SV +A C+ + KRP + +V
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 680 VMELNESLA 688
L E A
Sbjct: 298 QQLLQEMTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 163/309 (52%), Gaps = 30/309 (9%)
Query: 407 KNGSFELKNQRF---SYSNVLRITNNFER--------VLGNGGFGTVYHGYLDGTEVAVK 455
+N S E+ + RF S+ + +TNNF+ +G GGFG VY GY++ T VAVK
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVK 60
Query: 456 ----MLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL-QA 510
M+ ++ + +QF E++++ + H+NL L+G+ +G + L+Y +M NG+L
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120
Query: 511 LLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLS 560
L + LSW R +IA AA +HRD+KS NILL F AKI+DFGL+
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 561 RTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTH 620
R + + T + I GT Y+ PE + +T KSD+Y+FGVVLLEIIT ++
Sbjct: 181 RA-SEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 621 E-RIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQV 679
E ++ + + IE +D +++ D D SV +A C+ + KRP + +V
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 680 VMELNESLA 688
L E A
Sbjct: 298 QQLLQEMTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 155/295 (52%), Gaps = 27/295 (9%)
Query: 418 FSYSNVLRITNNFER--------VLGNGGFGTVYHGYLDGTEVAVK----MLSPSSAQGY 465
FS+ + +TNNF+ +G GGFG VY GY++ T VAVK M+ ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 466 KQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL-QALLLGEEADILSWEG 524
+QF E++++ + H+NL L+G+ +G + L+Y +M NG+L L + LSW
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 525 RLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
R +IA AA +HRD+KS NILL F AKI+DFGL+R + + +
Sbjct: 129 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQXVMXX 187
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHE-RIHITQWVSFML 633
I GT Y+ PE + +T KSD+Y+FGVVLLEIIT ++ E ++ +
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 246
Query: 634 GKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688
+ IE +D +++ D D SV +A C+ + KRP + +V L E A
Sbjct: 247 EEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 152/296 (51%), Gaps = 29/296 (9%)
Query: 418 FSYSNVLRITNNF-ERVL-------GNGGFGTVYHGYLDGTEVAVK----MLSPSSAQGY 465
FS+ + +TNNF ER + G GGFG VY GY++ T VAVK M+ ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 466 KQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL-QALLLGEEADILSWEG 524
+QF E+++ + H+NL L+G+ +G + L+Y + NG+L L + LSW
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 525 RLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
R +IA AA +HRD+KS NILL F AKI+DFGL+R E V
Sbjct: 126 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQXVXX 183
Query: 575 T-IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHE-RIHITQWVSFM 632
+ I GT Y PE + +T KSD+Y+FGVVLLEIIT ++ E ++ +
Sbjct: 184 SRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE 242
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688
+ IE +D + + D D SV +A C+ + KRP + +V L E A
Sbjct: 243 DEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTA 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTL 486
N + +G G FGTV+ G++VAVK+L A+ +F EV ++ R+ H N+
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEA-DILSWEGRLRIAIEAAK----------- 534
+G + N ++ E+++ G+L LL A + L RL +A + AK
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+KS N+L+ K+ K+ DFGLSR ++ S + AGTP ++ PE
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSR---LKASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 594 TEKSDVYNFGVVLLEIIT 611
EKSDVY+FGV+L E+ T
Sbjct: 217 NEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTL 486
N + +G G FGTV+ G++VAVK+L A+ +F EV ++ R+ H N+
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEA-DILSWEGRLRIAIEAAK----------- 534
+G + N ++ E+++ G+L LL A + L RL +A + AK
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHR++KS N+L+ K+ K+ DFGLSR ++ S + + AGTP ++ PE
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 594 TEKSDVYNFGVVLLEIIT 611
EKSDVY+FGV+L E+ T
Sbjct: 217 NEKSDVYSFGVILWELAT 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 43/214 (20%)
Query: 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTT 485
E ++G GGFG VY + G EVAVK +Q + + E +L + H N+
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE--ADIL-SWEGRLRIAIEAAK-------- 534
L G C + N L+ EF G L +L G+ DIL +W A++ A+
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 535 -----VHRDVKSTNILLSGKFQ--------AKIADFGLSRTFPVEGSGTHVTTTI--AGT 579
+HRD+KS+NIL+ K + KI DFGL+R + H TT + AG
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-------HRTTKMSAAGA 177
Query: 580 PGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSK 613
++ PE ++ ++ SDV+++GV+L E++T +
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQG-------YKQFQAEVELLMRIHH 480
+E+ +G GGFG V+ G L D + VA+K L ++G +++FQ EV ++ ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------ 534
N+ L G ++ EF+ G+L LL ++A + W +LR+ ++ A
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 535 ------VHRDVKSTNILL-----SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
VHRD++S NI L + AK+ADFGLS+ H + + G ++
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLLGNFQWM 193
Query: 584 DPEYYISNR--LTEKSDVYNFGVVLLEIITSKSVI-ERTHERIHITQWVSFMLGKGDIES 640
PE + TEK+D Y+F ++L I+T + E ++ +I + + I
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
PRL ++ C S KRP + +V EL+E
Sbjct: 254 DCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSE 286
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 28/267 (10%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 20 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + + IA + A+ +HRD+KS
Sbjct: 79 K-PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRDLKS 136
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE SN + +SD
Sbjct: 137 NNIFLHEDNTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I + M+G+G + P L + N +
Sbjct: 196 VYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGRGSL----SPDLSK-VRSNCPKRM 246
Query: 659 VEIAMACVSQTSTKRPTMNQVVMELNE 685
+ C+ + +RP+ +++ E+ E
Sbjct: 247 KRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F R LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI EF+ G+L+ L + I L + ++ +E
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 39/266 (14%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
E V+G G FG V +VA+K + S + K F E+ L R++H N+ L G C
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEE-------ADILSWEGRLRIAIE-------AAKVH 536
L+ E+ G+L +L G E A +SW + + A +H
Sbjct: 71 LNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 537 RDVKSTNILL-SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
RD+K N+LL +G KI DFG + TH+T G+ ++ PE + + +E
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNN-KGSAAWMAPEVFEGSNYSE 182
Query: 596 KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655
K DV+++G++L E+IT + + W + + P L I ++
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA--------VHNGTRPPL-----IKNL 229
Query: 656 WKTVEIAMA-CVSQTSTKRPTMNQVV 680
K +E M C S+ ++RP+M ++V
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 39/266 (14%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
E V+G G FG V +VA+K + S + K F E+ L R++H N+ L G C
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEE-------ADILSWEGRLRIAIE-------AAKVH 536
L+ E+ G+L +L G E A +SW + + A +H
Sbjct: 72 LNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 537 RDVKSTNILL-SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
RD+K N+LL +G KI DFG + TH+T G+ ++ PE + + +E
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNN-KGSAAWMAPEVFEGSNYSE 183
Query: 596 KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655
K DV+++G++L E+IT + + W + + P L I ++
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA--------VHNGTRPPL-----IKNL 230
Query: 656 WKTVEIAMA-CVSQTSTKRPTMNQVV 680
K +E M C S+ ++RP+M ++V
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 40/268 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLS---PSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+G+G FGTVY G G +VAVK+L P+ Q ++ F+ EV +L + H N+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+ N ++ ++ +L L +E ++ + IA + A+ +HRD+K
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQ-LIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKS 597
S NI L KI DFGL+ T SG+ G+ ++ PE +N + +S
Sbjct: 160 SNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 598 DVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657
DVY++G+VL E++T E + I+ + FM+G+G + D++ ++K
Sbjct: 219 DVYSYGIVLYELMTG----ELPYSHINNRDQIIFMVGRG----------YASPDLSKLYK 264
Query: 658 TVEIAMA-----CVSQTSTKRPTMNQVV 680
AM CV + +RP Q++
Sbjct: 265 NCPKAMKRLVADCVKKVKEERPLFPQIL 292
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 28/267 (10%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + + IA + A+ +HRD+KS
Sbjct: 91 K-PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRDLKS 148
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE SN + +SD
Sbjct: 149 NNIFLHEDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I + M+G+G + P L + N +
Sbjct: 208 VYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGRGSL----SPDLSK-VRSNCPKRM 258
Query: 659 VEIAMACVSQTSTKRPTMNQVVMELNE 685
+ C+ + +RP+ +++ E+ E
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 28/267 (10%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 89
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
++ ++ +L L E + + IA + A+ +HRD+KS
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHRDLKS 148
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE SN + +SD
Sbjct: 149 NNIFLHEDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I + M+G+G + P L + N +
Sbjct: 208 VYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGRGSL----SPDLSK-VRSNCPKRM 258
Query: 659 VEIAMACVSQTSTKRPTMNQVVMELNE 685
+ C+ + +RP+ +++ E+ E
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+ LGNG FG V+ G +G T+VA+K L P + + F E +++ ++ H L L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 491 DEG--------TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-VHRDVKS 541
E N+G + +F+ +G +AL L D+ + IE +HRD++S
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRS 133
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
NIL+ KIADFGL+R +E + + PE + R T KSDV++
Sbjct: 134 ANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 602 FGVVLLEIITSKSV 615
FG++L E++T V
Sbjct: 192 FGILLTELVTKGRV 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 432 RVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGY-KQFQAEVELLMRIHHKNLT 484
R LG G FG V D G +VAVK L P S + + E+E+L ++H+N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 485 TLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------- 534
G C E G LI EF+ +G+L+ L + I + + +L+ A++ K
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI-NLKQQLKYAVQICKGMDYLGSR 145
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
VHRD+ + N+L+ + Q KI DFGL++ + V + PE + ++
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 593 LTEKSDVYNFGVVLLEIIT 611
SDV++FGV L E++T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQG-------YKQFQAEVELLMRIHH 480
+E+ +G GGFG V+ G L D + VA+K L ++G +++FQ EV ++ ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------ 534
N+ L G ++ EF+ G+L LL ++A + W +LR+ ++ A
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 535 ------VHRDVKSTNILL-----SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
VHRD++S NI L + AK+ADFG S+ H + + G ++
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLLGNFQWM 193
Query: 584 DPEYYISNR--LTEKSDVYNFGVVLLEIITSKSVI-ERTHERIHITQWVSFMLGKGDIES 640
PE + TEK+D Y+F ++L I+T + E ++ +I + + I
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
PRL ++ C S KRP + +V EL+E
Sbjct: 254 DCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSE 286
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 432 RVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGY-KQFQAEVELLMRIHHKNLT 484
R LG G FG V D G +VAVK L P S + + E+E+L ++H+N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 485 TLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------- 534
G C E G LI EF+ +G+L+ L + I + + +L+ A++ K
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI-NLKQQLKYAVQICKGMDYLGSR 133
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
VHRD+ + N+L+ + Q KI DFGL++ + V + PE + ++
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 593 LTEKSDVYNFGVVLLEIIT 611
SDV++FGV L E++T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQG-------YKQFQAEVELLMRIHH 480
+E+ +G GGFG V+ G L D + VA+K L ++G +++FQ EV ++ ++H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------ 534
N+ L G ++ EF+ G+L LL ++A + W +LR+ ++ A
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 535 ------VHRDVKSTNILL-----SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
VHRD++S NI L + AK+ADF LS+ H + + G ++
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLLGNFQWM 193
Query: 584 DPEYYISNR--LTEKSDVYNFGVVLLEIITSKSVI-ERTHERIHITQWVSFMLGKGDIES 640
PE + TEK+D Y+F ++L I+T + E ++ +I + + I
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
PRL ++ C S KRP + +V EL+E
Sbjct: 254 DCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSE 286
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 93/213 (43%), Gaps = 35/213 (16%)
Query: 430 FERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
+R LG G FG V+ D VAVK L +S K F E ELL + H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD-ILSWEGR----------LRIAIE 531
+ G C EG +++E+M +G+L L D +L EG L IA +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSR---TFPVEGSGTHVTTTIAG 578
A VHRD+ + N L+ KI DFG+SR + G H I
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P PE + + T +SDV++ GVVL EI T
Sbjct: 197 MP----PESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 430 FERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
+R LG G FG V+ D VAVK L + K FQ E ELL + H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADI--------------LSWEGRLRI 528
+ G C +G +++E+M +G+L L D L L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSR---TFPVEGSGTHVTTT 575
A + A VHRD+ + N L+ KI DFG+SR + G H
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
I P PE + + T +SDV++FGV+L EI T
Sbjct: 199 IRWMP----PESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 429 NFERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + +G+G FG V+ GY L+ +VA+K + A + F E E++M++ H L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 488 GYCDEGTNRGLIYEFMANGNLQ------------ALLLGEEADILSWEGRLRIAIEAAKV 535
G C E L++EFM +G L LLG D+ L EA +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVI 123
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + N L+ K++DFG++R F ++ T T T + PE + +R +
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVK-WASPEVFSFSRYSS 181
Query: 596 KSDVYNFGVVLLEIITSKSV 615
KSDV++FGV++ E+ + +
Sbjct: 182 KSDVWSFGVLMWEVFSEGKI 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 429 NFERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + +G+G FG V+ GY L+ +VA+K + A + F E E++M++ H L L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 488 GYCDEGTNRGLIYEFMANGNLQ------------ALLLGEEADILSWEGRLRIAIEAAKV 535
G C E L++EFM +G L LLG D+ L EA +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVI 128
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + N L+ K++DFG++R F ++ T T T + PE + +R +
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVK-WASPEVFSFSRYSS 186
Query: 596 KSDVYNFGVVLLEIITSKSV 615
KSDV++FGV++ E+ + +
Sbjct: 187 KSDVWSFGVLMWEVFSEGKI 206
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 429 NFERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + +G+G FG V+ GY L+ +VA+K + A + F E E++M++ H L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 488 GYCDEGTNRGLIYEFMANGNLQ------------ALLLGEEADILSWEGRLRIAIEAAKV 535
G C E L++EFM +G L LLG D+ L EA+ +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVI 125
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + N L+ K++DFG++R F ++ T T T + PE + +R +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVK-WASPEVFSFSRYSS 183
Query: 596 KSDVYNFGVVLLEIITSKSV 615
KSDV++FGV++ E+ + +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKI 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 429 NFERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + +G+G FG V+ GY L+ +VA+K + A + F E E++M++ H L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 488 GYCDEGTNRGLIYEFMANGNLQ------------ALLLGEEADILSWEGRLRIAIEAAKV 535
G C E L++EFM +G L LLG D+ L EA +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVI 125
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + N L+ K++DFG++R F ++ T T T + PE + +R +
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVK-WASPEVFSFSRYSS 183
Query: 596 KSDVYNFGVVLLEIITSKSV 615
KSDV++FGV++ E+ + +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKI 203
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + +L + ++ +E
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 7 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 65
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 66 VQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 124
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 183 TIKSDVWSFGILLTELTTKGRV 204
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 430 FERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 484 TTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----A 532
G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+ + NIL+ + + KI DFGL++ P + V + PE ++
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 593 LTEKSDVYNFGVVLLEIIT 611
+ SDV++FGVVL E+ T
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 430 FERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 484 TTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----A 532
G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+ + NIL+ + + KI DFGL++ P + V + PE ++
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 593 LTEKSDVYNFGVVLLEIIT 611
+ SDV++FGVVL E+ T
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ +I H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 429 NFERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + +G+G FG V+ GY L+ +VA+K + S F E E++M++ H L L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 488 GYCDEGTNRGLIYEFMANGNLQ------------ALLLGEEADILSWEGRLRIAIEAAKV 535
G C E L++EFM +G L LLG D+ L EA +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVI 145
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + N L+ K++DFG++R F ++ T T T + PE + +R +
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVK-WASPEVFSFSRYSS 203
Query: 596 KSDVYNFGVVLLEIITSKSV 615
KSDV++FGV++ E+ + +
Sbjct: 204 KSDVWSFGVLMWEVFSEGKI 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 99/227 (43%), Gaps = 45/227 (19%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDG-------TEVAVKMLSP-SSAQGYKQFQAEVELLMR 477
NN E R +G G FG V+ G T VAVKML +SA FQ E L+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 478 IHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL---------------LGEEADI--- 519
+ N+ L+G C G L++E+MA G+L L L A +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 520 ----LSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPV 565
LS +L IA + A VHRD+ + N L+ KIADFGLSR +
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN--I 224
Query: 566 EGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ + P ++ PE NR T +SDV+ +GVVL EI +
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 483 LTTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE---- 531
+ G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+ + NIL+ + + KI DFGL++ P + V + PE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ + SDV++FGVVL E+ T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 434 LGNGGFGTVY----HGYL---DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
LG G FG V+ H L D VAVK L +S + FQ E ELL + H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLL--GEEADILS-----------WEGRLRIAIEAA 533
G C EG +++E+M +G+L L G +A +L+ L +A + A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 534 K----------VHRDVKSTNILLSGKFQAKIADFGLSRTF---PVEGSGTHVTTTIAGTP 580
VHRD+ + N L+ KI DFG+SR G I P
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 205
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE + + T +SDV++FGVVL EI T
Sbjct: 206 ----PESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 64
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 65 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 123
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 182 TIKSDVWSFGILLTELTTKGRV 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 66
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 67 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 125
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 184 TIKSDVWSFGILLTELTTKGRV 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 10 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 68
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 69 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 127
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 186 TIKSDVWSFGILLTELTTKGRV 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 33/273 (12%)
Query: 431 ERVLGNGGFGTVYHGYLDGTE------VAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
++V+G G FG VY G L + VA+K L + + F E ++ + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------- 534
L G + +I E+M NG L L ++ + +L G LR K
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+ + NIL++ K++DFGLSR + T+ T+ + PE + T
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
Query: 595 EKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP--RLHEDFDI 652
SDV++FG+V+ E++T ER + + L ++ ++ RL D
Sbjct: 229 SASDVWSFGIVMWEVMTYG---ERPY----------WELSNHEVMKAINDGFRLPTPMDC 275
Query: 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
S ++ M C Q +RP +V L++
Sbjct: 276 PSA--IYQLMMQCWQQERARRPKFADIVSILDK 306
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 434 LGNGGFGTVY----HGYL---DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
LG G FG V+ H L D VAVK L +S + FQ E ELL + H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 487 VGYCDEGTNRGLIYEFMANGNL---------QALLLGEEADI----LSWEGRLRIAIEAA 533
G C EG +++E+M +G+L A LL D+ L L +A + A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 534 K----------VHRDVKSTNILLSGKFQAKIADFGLSRTF---PVEGSGTHVTTTIAGTP 580
VHRD+ + N L+ KI DFG+SR G I P
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 199
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE + + T +SDV++FGVVL EI T
Sbjct: 200 ----PESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 152 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 271 QKFTTKSDVWSFGVLLWELMT 291
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 241
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 242 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNR 592
VHRD+++ NIL+ K+ADFGL+R + A P + PE + R
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 593 LTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRV 380
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 98 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT 237
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 429 NFERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + +G+G FG V+ GY L+ +VA+K + A + F E E++M++ H L L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 488 GYCDEGTNRGLIYEFMANGNLQ------------ALLLGEEADILSWEGRLRIAIEAAKV 535
G C E L+ EFM +G L LLG D+ L EA +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVI 126
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + N L+ K++DFG++R F ++ T T T + PE + +R +
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVK-WASPEVFSFSRYSS 184
Query: 596 KSDVYNFGVVLLEIITSKSV 615
KSDV++FGV++ E+ + +
Sbjct: 185 KSDVWSFGVLMWEVFSEGKI 204
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 241
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 242 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNR 592
VHRD+++ NIL+ K+ADFGL+R + A P + PE + R
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 593 LTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRV 380
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 112 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 231 QKFTTKSDVWSFGVLLWELMT 251
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 434 LGNGGFGTVY----HGYL---DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
LG G FG V+ H L D VAVK L +S + FQ E ELL + H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 487 VGYCDEGTNRGLIYEFMANGNL---------QALLLGEEADI----LSWEGRLRIAIEAA 533
G C EG +++E+M +G+L A LL D+ L L +A + A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 534 K----------VHRDVKSTNILLSGKFQAKIADFGLSRTF---PVEGSGTHVTTTIAGTP 580
VHRD+ + N L+ KI DFG+SR G I P
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP 228
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE + + T +SDV++FGVVL EI T
Sbjct: 229 ----PESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 111 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 230 QKFTTKSDVWSFGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 90 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 209 QKFTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 85 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 204 QKFTTKSDVWSFGVLLWELMT 224
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 75 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 133 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 237
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 241
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 242 VQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNR 592
VHRD+++ NIL+ K+ADFGL+R + A P + PE + R
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 593 LTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRV 380
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 38/270 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 80 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 137
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 138 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 242
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVVMEL 683
AM C+ + +RP Q++ +
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 38/270 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 18 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 77 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 134
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 135 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 194 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 239
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVVMEL 683
AM C+ + +RP Q++ +
Sbjct: 240 CPKAMKRLMAECLKKKRDERPLFPQILASI 269
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 88 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R + E H T ++ E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
+ R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+
Sbjct: 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHE 322
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 323 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYIS 590
VHRD+++ NIL+ K+ADFGL+R + A P + PE +
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALY 438
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSV 615
R T KSDV++FG++L E+ T V
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRV 463
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 122/267 (45%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-S 73
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 133 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 237
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 32/275 (11%)
Query: 431 ERVLGNGGFGTVYHGYLD--GTE---VAVKML-SPSSAQGYKQFQAEVELLMRIHHKNLT 484
E+V+G G FG V G+L G VA+K L S + + + F +E ++ + H N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK-------V 535
L G + T +I EFM NG+L + L + ++ G LR K V
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT--PGYLDPEYYISNRL 593
HRD+ + NIL++ K++DFGLSR + S T+ + G + PE +
Sbjct: 158 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI-VDPRLHEDFDI 652
T SDV+++G+V+ E++ S ER + W M + I +I D RL D
Sbjct: 218 TSASDVWSYGIVMWEVM---SYGERPY-------WD--MTNQDVINAIEQDYRLPPPMDC 265
Query: 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
S ++ + C + RP Q+V L++ +
Sbjct: 266 PSALH--QLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 38/270 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 80 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 137
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 138 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 242
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVVMEL 683
AM C+ + +RP Q++ +
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 43 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 102 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 159
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 160 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 219 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 264
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 265 CPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 19/201 (9%)
Query: 429 NFERVLGNGGFGTVYHGYL---DGTEV--AVKMLSPSSAQG-YKQFQAEVELLMRIHHKN 482
+F V+G G FG VYHG L DG ++ AVK L+ + G QF E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 483 LTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE--AA 533
+ +L+G C EG+ ++ +M +G+L+ + E D++ + ++ ++ A+
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 534 K--VHRDVKSTNILLSGKFQAKIADFGLSR-TFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K VHRD+ + N +L KF K+ADFGL+R E H T ++ E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
+ T KSDV++FGV+L E++T
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 75
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 76 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 77
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 78 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 194
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRI 218
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 103 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 160
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 161 NNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 220 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 265
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 74
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 75 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 191
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 429 NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKN 482
ERV+G G FG V G L VA+K L + ++ F E ++ + H N
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLR-IAI------EAA 533
+ L G G ++ EFM NG L A L + ++ G LR IA +
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + NIL++ K++DFGLSR + + TT + PE +
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 594 TEKSDVYNFGVVLLEIIT 611
T SDV+++G+V+ E+++
Sbjct: 226 TSASDVWSYGIVMWEVMS 243
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 76
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 77 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 193
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRI 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 430 FERVLGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
F + LG G FG+V D G VAVK L S+ + + F+ E+E+L + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 484 TTLVGYCDEGTNRG--LIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----A 532
G C R LI E++ G+L+ L + I L + ++ +E
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HR++ + NIL+ + + KI DFGL++ P + V + PE ++
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 593 LTEKSDVYNFGVVLLEIIT 611
+ SDV++FGVVL E+ T
Sbjct: 195 FSVASDVWSFGVVLYELFT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 68
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 184 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKL 242
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M+ G+L L GE L + +A + A
Sbjct: 243 VQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 301
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNR 592
VHRD+++ NIL+ K+ADFGL R + A P + PE + R
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIE---DNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 593 LTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRV 381
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 12 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 70
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 71 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 187
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRI 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 11 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 69
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 70 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 186
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRI 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 75 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 132
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 133 NNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 237
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 68
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 74
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 75 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 36 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 95 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 152
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 153 NNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 212 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 257
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 258 CPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 72
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M G+L L GE L + ++ + A
Sbjct: 73 VQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 190 TIKSDVWSFGILLTELTTKGRV 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 15 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 73
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 74 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRI 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 20 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 78
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 79 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRI 219
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E LG G FG V+ G +GT VA+K L P + + F E +++ ++ H+ L
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKL 72
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L E ++ E+M G+L L GE L + ++ + A
Sbjct: 73 VQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+++ NIL+ K+ADFGL+R +E + + PE + R
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 594 TEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L E+ T V
Sbjct: 190 TIKSDVWSFGILLTELTTKGRV 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 68
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYG 185
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 38/267 (14%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
+G+G FGTVY G G +VAVKML+ ++ Q + F+ EV +L + H N+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ ++ ++ +L L E + IA + A+ +HRD+KS
Sbjct: 103 K-PQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKS 160
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSD 598
NI L KI DFGL+ T SG+H ++G+ ++ PE N + +SD
Sbjct: 161 NNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658
VY FG+VL E++T + + R I FM+G+G + D++ V
Sbjct: 220 VYAFGIVLYELMTGQLPYSNINNRDQII----FMVGRGYLSP----------DLSKVRSN 265
Query: 659 VEIAMA-----CVSQTSTKRPTMNQVV 680
AM C+ + +RP Q++
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 31/201 (15%)
Query: 425 RITNNFERVLGNGGFGTVYHG-YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E+ LG G FG V+ Y T+VAVK + P S + F AE ++ + H L
Sbjct: 181 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKL 239
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L + +I EFMA G+L L +E + + + A+
Sbjct: 240 VKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRT---FPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRD+++ NIL+S KIADFGL+R FP++ + PE
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTA---------------PEAINF 343
Query: 591 NRLTEKSDVYNFGVVLLEIIT 611
T KSDV++FG++L+EI+T
Sbjct: 344 GSFTIKSDVWSFGILLMEIVT 364
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 434 LGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+ L L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 493 GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKST 542
+I E+M NG+L L L+ L +A + A+ +HRD+++
Sbjct: 75 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 133
Query: 543 NILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
NIL+S KIADFGL+R +E + + PE T KSDV++F
Sbjct: 134 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 603 GVVLLEIITSKSV 615
G++L EI+T +
Sbjct: 192 GILLTEIVTHGRI 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHG-YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E+ LG G FG V+ Y T+VAVK + P S + F AE ++ + H L
Sbjct: 14 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKL 72
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L + +I EFMA G+L L +E + + + A+
Sbjct: 73 VKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 594 TEKSDVYNFGVVLLEIIT 611
T KSDV++FG++L+EI+T
Sbjct: 190 TIKSDVWSFGILLMEIVT 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 432 RVLGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+ LG G FG V+ GY + T+VAVK L P + + F E L+ + H L L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+I E+MA G+L L +E + + + + A+ +HRD++
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR 137
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVY 600
+ N+L+S KIADFGL+R +E + + PE T KSDV+
Sbjct: 138 AANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 601 NFGVVLLEIIT 611
+FG++L EI+T
Sbjct: 196 SFGILLYEIVT 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 42/217 (19%)
Query: 429 NFERVLGNGGFGTVYHGYL--DG--TEVAVK-MLSPSSAQGYKQFQAEVELLMRI-HHKN 482
F+ V+G G FG V + DG + A+K M +S ++ F E+E+L ++ HH N
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 483 LTTLVGYCDEGTNRGLIY---EFMANGNLQALLLGEE--------------ADILSWEGR 525
+ L+G C+ +RG +Y E+ +GNL L A LS +
Sbjct: 88 IINLLGACE---HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 526 LRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575
L A + A+ +HRD+ + NIL+ + AKIADFGLSR G +V T
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKT 199
Query: 576 IAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ P ++ E + T SDV+++GV+L EI++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 42/217 (19%)
Query: 429 NFERVLGNGGFGTVYHGYL--DG--TEVAVK-MLSPSSAQGYKQFQAEVELLMRI-HHKN 482
F+ V+G G FG V + DG + A+K M +S ++ F E+E+L ++ HH N
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 483 LTTLVGYCDEGTNRGLIY---EFMANGNLQALLLGEE--------------ADILSWEGR 525
+ L+G C+ +RG +Y E+ +GNL L A LS +
Sbjct: 78 IINLLGACE---HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 526 LRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575
L A + A+ +HRD+ + NIL+ + AKIADFGLSR G +V T
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKT 189
Query: 576 IAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ P ++ E + T SDV+++GV+L EI++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKML-SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY- 489
+ +G G FG V G G +VAVK + + ++AQ F AE ++ ++ H NL L+G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 255
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDV 539
+E ++ E+MA G+L L +L + L+ +++ + VHRD+
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 315
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
+ N+L+S AK++DFGL++ E S T T + + PE + + KSDV
Sbjct: 316 AARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVK--WTAPEALREKKFSTKSDV 369
Query: 600 YNFGVVLLEI 609
++FG++L EI
Sbjct: 370 WSFGILLWEI 379
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 32/277 (11%)
Query: 429 NFERVLGNGGFGTVYHGYLD--GTE---VAVKML-SPSSAQGYKQFQAEVELLMRIHHKN 482
E+V+G G FG V G+L G VA+K L S + + + F +E ++ + H N
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------ 534
+ L G + T +I EFM NG+L + L + ++ G LR K
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT--PGYLDPEYYISN 591
VHR + + NIL++ K++DFGLSR + S T+ + G + PE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 592 RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI-VDPRLHEDF 650
+ T SDV+++G+V+ E++ S ER + W M + I +I D RL
Sbjct: 190 KFTSASDVWSYGIVMWEVM---SYGERPY-------WD--MTNQDVINAIEQDYRLPPPM 237
Query: 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D S ++ + C + RP Q+V L++ +
Sbjct: 238 DCPSALH--QLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKML-SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY- 489
+ +G G FG V G G +VAVK + + ++AQ F AE ++ ++ H NL L+G
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 68
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDV 539
+E ++ E+MA G+L L +L + L+ +++ + VHRD+
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 128
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
+ N+L+S AK++DFGL++ E S T T + + PE + + KSDV
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVK--WTAPEALREKKFSTKSDV 182
Query: 600 YNFGVVLLEI 609
++FG++L EI
Sbjct: 183 WSFGILLWEI 192
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 432 RVLGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+ LG G FG V+ GY + T+VAVK L P + + F E L+ + H L L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+ +I EFMA G+L L +E + + + + A+ +HRD++
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR 136
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVY 600
+ N+L+S KIADFGL+R +E + + PE T KS+V+
Sbjct: 137 AANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 601 NFGVVLLEIIT 611
+FG++L EI+T
Sbjct: 195 SFGILLYEIVT 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 235
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 236 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 36 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 156 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 262
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 263 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHG-YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL 483
R + E+ LG G FG V+ Y T+VAVK + P S + F AE ++ + H L
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKL 245
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
L + +I EFMA G+L L +E + + + A+
Sbjct: 246 VKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 594 TEKSDVYNFGVVLLEIIT 611
T KSDV++FG++L+EI+T
Sbjct: 363 TIKSDVWSFGILLMEIVT 380
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 146 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 252
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 253 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 294
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
V R T LG G G V+ GY +G T+VAVK L S F AE L+ ++ H+
Sbjct: 10 VPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQ 68
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
L L + +I E+M NG+L L L+ L +A + A+
Sbjct: 69 RLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+++ NIL+S KIADFGL+R +E + + PE
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDAEXTAREGAKFPIKWTAPEAINYG 185
Query: 592 RLTEKSDVYNFGVVLLEIITSKSV 615
T KSDV++FG++L EI+T +
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKML-SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY- 489
+ +G G FG V G G +VAVK + + ++AQ F AE ++ ++ H NL L+G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 83
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDV 539
+E ++ E+MA G+L L +L + L+ +++ + VHRD+
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 143
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
+ N+L+S AK++DFGL++ E S T T + + PE + + KSDV
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKL--PVKWTAPEALREKKFSTKSDV 197
Query: 600 YNFGVVLLEI 609
++FG++L EI
Sbjct: 198 WSFGILLWEI 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 434 LGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
LG G FG V+ GY +G T+VAVK L S F AE L+ ++ H+ L L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 493 GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKST 542
+I E+M NG+L L L+ L +A + A+ +HR++++
Sbjct: 76 EPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAA 134
Query: 543 NILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
NIL+S KIADFGL+R +E + + PE T KSDV++F
Sbjct: 135 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 603 GVVLLEIITSKSV 615
G++L EI+T +
Sbjct: 193 GILLTEIVTHGRI 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-H 479
N + LG G FG V G + VAVKML + ++ +E+++L+ I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 480 HKNLTTLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE----------ADILSWEGRLRI 528
H N+ L+G C + G +I EF GNL L + D L+ E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ + AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDAR 207
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-H 479
N + LG G FG V G + VAVKML + ++ +E+++L+ I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 480 HKNLTTLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE----------ADILSWEGRLRI 528
H N+ L+G C + G +I EF GNL L + D L+ E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ + AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARD--IYKDPDYVRKGDAR 207
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGL+R + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G FG VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWA 195
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 196 FGVLLWEIAT 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-----TEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
E V+G G FG V G L + VA+K L + + ++F +E ++ + H N
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLR-IA------IEAA 533
+ L G ++ EFM NG L + L + ++ G LR IA E +
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT--PGYLDPEYYISN 591
VHRD+ + NIL++ K++DFGLSR S T+++ G + PE
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ T SD +++G+V+ E+++
Sbjct: 197 KFTSASDAWSYGIVMWEVMS 216
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E+M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGL R + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 42/216 (19%)
Query: 430 FERVLGNGGFGTVYHGYL--DG--TEVAVK-MLSPSSAQGYKQFQAEVELLMRI-HHKNL 483
F+ V+G G FG V + DG + A+K M +S ++ F E+E+L ++ HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 484 TTLVGYCDEGTNRGLIY---EFMANGNLQALLLGEE--------------ADILSWEGRL 526
L+G C+ +RG +Y E+ +GNL L A LS + L
Sbjct: 86 INLLGACE---HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
A + A+ +HR++ + NIL+ + AKIADFGLSR G +V T+
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTM 197
Query: 577 AGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ E + T SDV+++GV+L EI++
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E M NG+L + L +A ++ G LR
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 235
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 236 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 420 YSNVLRITN-NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEV 472
++ L TN + ++V+G G FG V G L VA+K L + + + F E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAI 530
++ + H N+ L G + ++ E M NG+L + L +A ++ G LR
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 531 EAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
K VHRD+ + NIL++ K++DFGLSR + + T +
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643
PE + T SDV+++G+VL E++ S ER + + + D+ VD
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVM---SYGERPY----------WEMSNQDVIKAVD 264
Query: 644 P--RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
RL D + ++ + C + RP Q+V L++
Sbjct: 265 EGYRLPPPMDCPAA--LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + +G + A P ++
Sbjct: 197 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRAGYYRKGGCAMLPVKWM 253
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + +G + A P ++
Sbjct: 174 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRAGYYRKGGCAMLPVKWM 230
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-H 479
N + LG G FG V G + VAVKML + ++ +E+++L+ I H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 480 HKNLTTLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE-------------ADILSWEGR 525
H N+ L+G C + G +I EF GNL L + D L+ E
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 526 LRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575
+ + + AK +HRD+ + NILLS K KI DFGL+R + V
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IXKDPDXVRKG 208
Query: 576 IAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
A P ++ PE T +SDV++FGV+L EI +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-----TEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
E V+G G FG V G L + VA+K L + + ++F +E ++ + H N
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLR-IA------IEAA 533
+ L G ++ EFM NG L + L + ++ G LR IA E +
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT--PGYLDPEYYISN 591
VHRD+ + NIL++ K++DFGLSR S T+++ G + PE
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ T SD +++G+V+ E+++
Sbjct: 199 KFTSASDAWSYGIVMWEVMS 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWA 195
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 196 FGVLLWEIAT 205
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKML-SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY- 489
+ +G G FG V G G +VAVK + + ++AQ F AE ++ ++ H NL L+G
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 74
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDV 539
+E ++ E+MA G+L L +L + L+ +++ + VHRD+
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 134
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
+ N+L+S AK++DFGL++ E S T T + + PE + KSDV
Sbjct: 135 AARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVK--WTAPEALREAAFSTKSDV 188
Query: 600 YNFGVVLLEI 609
++FG++L EI
Sbjct: 189 WSFGILLWEI 198
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 487 VGYCDEGTNRGLIYEFMANGN----LQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 194 LWSLGVLCYEFLVGKPPFE 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 141 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLAYNKFSIKSDVWA 198
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 199 FGVLLWEIAT 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 19/196 (9%)
Query: 434 LGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
LG G FG+V D G VAVK L S + FQ E+++L +H +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 488 GYCDEGTNR---GLIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----AAKV 535
G G R L+ E++ +G L+ L A + L + ++ +E V
Sbjct: 75 GV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV 133
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ + NIL+ + KIADFGL++ P++ V + PE N +
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSR 193
Query: 596 KSDVYNFGVVLLEIIT 611
+SDV++FGVVL E+ T
Sbjct: 194 QSDVWSFGVVLYELFT 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 215 LWSLGVLCYEFLVGKPPFE 233
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTAPESLAYNKFSIKSDVWA 202
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 203 FGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 141 RNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 198 AFGVLLWEIAT 208
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE------------ADILSWEGRLRIAIE 531
L+G C + G +I EF GNL L + D L+ E + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK +HRD+ + NILLS K KI DFGL+R + V A P
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARD--IXKDPDXVRKGDARLPL 214
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ PE T +SDV++FGV+L EI +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 150
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 151 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 206 LWSLGVLCYEFLVGKPPFE 224
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 202 AFGVLLWEIAT 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 30/211 (14%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT-------EVAVKML-SPSSAQGYKQFQAEVELLMRI-H 479
F + LG G FG V G +VAVKML S + A + +E++++ +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE-EADILSWEGR---LR-------- 527
H+N+ L+G C G +I E+ G+L L + EAD+ +GR LR
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 528 ----IAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
+A A+K +HRDV + N+LL+ AKI DFGL+R + ++ A P
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD--IMNDSNYIVKGNARLPV 218
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ PE T +SDV+++G++L EI +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 152
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 153 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 210 AFGVLLWEIAT 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 143
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 144 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 201 AFGVLLWEIAT 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 199 AFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 30/211 (14%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT-------EVAVKML-SPSSAQGYKQFQAEVELLMRI-H 479
F + LG G FG V G +VAVKML S + A + +E++++ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE-EADILSWEGR---LR-------- 527
H+N+ L+G C G +I E+ G+L L + EAD+ +GR LR
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 528 ----IAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
+A A+K +HRDV + N+LL+ AKI DFGL+R + ++ A P
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD--IMNDSNYIVKGNARLPV 226
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ PE T +SDV+++G++L EI +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 197 AFGVLLWEIAT 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 32/233 (13%)
Query: 408 NGSFELKNQRFS-YSNVLRITNNFERVLGNGGFGTVYHGYLDGT-------EVAVKMLSP 459
N SF K S V R R LG+G FG VY G + G +VAVK L
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 460 -SSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-----L 513
S Q F E ++ +++H+N+ +G + R ++ E MA G+L++ L
Sbjct: 72 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 514 GEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLS----GKFQAKIADFGL 559
+ L+ L +A + A +HRD+ + N LL+ G+ AKI DFG+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGM 190
Query: 560 SRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+R + + + A P ++ PE ++ T K+D ++FGV+L EI +
Sbjct: 191 ARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 199 AFGVLLWEIAT 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 425 RITNNFERVLGNGGFGTVYHG-YLDGTE----VAVKMLSP-SSAQGYKQFQAEVELLMRI 478
R+ + +RV+G G FG VYHG Y+D + A+K LS + Q + F E L+ +
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 479 HHKNLTTLVGYC--DEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAIE 531
+H N+ L+G EG L+ +M +G+L + + D++S+ ++ +E
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 532 AAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPE 586
VHRD+ + N +L F K+ADFGL+R + A P + E
Sbjct: 139 YLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 587 YYISNRLTEKSDVYNFGVVLLEIIT 611
+ R T KSDV++FGV+L E++T
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 430 FERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNL 483
ERV+G G FG V G L VA+K L + + + F E ++ + H N+
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------- 534
L G + ++ E+M NG+L L + ++ G LR K
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+ + NIL++ K++DFGLSR + + T + PE + T
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
Query: 595 EKSDVYNFGVVLLEIIT 611
SDV+++G+V+ E+++
Sbjct: 206 SASDVWSYGIVMWEVVS 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HRD+ +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR T+ A P + PE N+ + KSDV+
Sbjct: 142 RNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 199 AFGVLLWEIAT 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 189 LWSLGVLCYEFLVGKPPFE 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARL 212
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 192 LWSLGVLCYEFLVGKPPFE 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 194 LWSLGVLCYEFLVGKPPFE 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 194 LWSLGVLCYEFLVGKPPFE 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HRD+ +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 138 RNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWA 195
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 196 FGVLLWEIAT 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT++GT YL PE EK D
Sbjct: 135 IKPENLLLGSAGELKIADFGWSCHAP-----SSRRTTLSGTLDYLPPEMIEGRMHDEKVD 189
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 190 LWSLGVLCYEFLVGKPPFE 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHH 480
+FE R LG G FG VY ++ +A+K+L + + Q + EVE+ + H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK-- 534
N+ L GY + T LI E+ G LQ L +E ++ L A+
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+LL + KIADFG S P + TT+ GT YL PE
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRM 181
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE 617
EK D+++ GV+ E + K E
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ +++H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 227
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 429 NFERVLGNGGFGTVYHGYLD--GTE---VAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
E+V+G G FG V G L G VA+K L + + + F +E ++ + H N
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------ 534
+ L G + +I E+M NG+L A L + ++ G LR K
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + NIL++ K++DFG+SR + + T + PE +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 594 TEKSDVYNFGVVLLEIIT 611
T SDV+++G+V+ E+++
Sbjct: 212 TSASDVWSYGIVMWEVMS 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARL 214
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 434 LGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
LG G FG+V D G VAVK L S + FQ E+++L +H +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 488 G--YCDEGTNRGLIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----AAKVH 536
G Y + L+ E++ +G L+ L A + L + ++ +E VH
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPEYYISNRLTE 595
RD+ + NIL+ + KIADFGL++ P++ +V +P + PE N +
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQSPIFWYAPESLSDNIFSR 196
Query: 596 KSDVYNFGVVLLEIIT 611
+SDV++FGVVL E+ T
Sbjct: 197 QSDVWSFGVVLYELFT 212
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 408 NGSFELKNQRFS-YSNVLRITNNFERVLGNGGFGTVYHGYLDGT-------EVAVKMLSP 459
N SF K S V R R LG+G FG VY G + G +VAVK L
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 460 -SSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-----L 513
S Q F E ++ + +H+N+ +G + R ++ E MA G+L++ L
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 514 GEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLS----GKFQAKIADFGL 559
+ L+ L +A + A +HRD+ + N LL+ G+ AKI DFG+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGM 190
Query: 560 SRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+R + + + A P ++ PE ++ T K+D ++FGV+L EI +
Sbjct: 191 ARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 429 NFERVLGNGGFGTVYHGYLD--GTE---VAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
E+V+G G FG V G L G VA+K L + + + F +E ++ + H N
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------ 534
+ L G + +I E+M NG+L A L + ++ G LR K
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + NIL++ K++DFG+SR + + T + PE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 594 TEKSDVYNFGVVLLEIIT 611
T SDV+++G+V+ E+++
Sbjct: 197 TSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 429 NFERVLGNGGFGTVYHGYLD--GTE---VAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
E+V+G G FG V G L G VA+K L + + + F +E ++ + H N
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------ 534
+ L G + +I E+M NG+L A L + ++ G LR K
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + NIL++ K++DFG+SR + + T + PE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 594 TEKSDVYNFGVVLLEIIT 611
T SDV+++G+V+ E+++
Sbjct: 191 TSASDVWSYGIVMWEVMS 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + V A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IXKDPDXVRKGDARL 212
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 434 LGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
LG G FG+V D G VAVK L S + FQ E+++L +H +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 488 G--YCDEGTNRGLIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----AAKVH 536
G Y + L+ E++ +G L+ L A + L + ++ +E VH
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPEYYISNRLTE 595
RD+ + NIL+ + KIADFGL++ P++ +V +P + PE N +
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQSPIFWYAPESLSDNIFSR 197
Query: 596 KSDVYNFGVVLLEIIT 611
+SDV++FGVVL E+ T
Sbjct: 198 QSDVWSFGVVLYELFT 213
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 408 NGSFELKNQRFS-YSNVLRITNNFERVLGNGGFGTVYHGYLDGT-------EVAVKMLSP 459
N SF K S V R R LG+G FG VY G + G +VAVK L
Sbjct: 38 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 97
Query: 460 -SSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-----L 513
S Q F E ++ + +H+N+ +G + R ++ E MA G+L++ L
Sbjct: 98 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 157
Query: 514 GEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLS----GKFQAKIADFGL 559
+ L+ L +A + A +HRD+ + N LL+ G+ AKI DFG+
Sbjct: 158 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGM 216
Query: 560 SRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+R + + + A P ++ PE ++ T K+D ++FGV+L EI +
Sbjct: 217 ARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 192 LWSLGVLCYEFLVGKPPFE 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 434 LGNGGFGTVYHGYLD------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
LG G FG+V D G VAVK L S + FQ E+++L +H +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 488 G--YCDEGTNRGLIYEFMANGNLQALLLGEEADI-----LSWEGRLRIAIE----AAKVH 536
G Y + L+ E++ +G L+ L A + L + ++ +E VH
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPEYYISNRLTE 595
RD+ + NIL+ + KIADFGL++ P++ +V +P + PE N +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQSPIFWYAPESLSDNIFSR 209
Query: 596 KSDVYNFGVVLLEIIT 611
+SDV++FGVVL E+ T
Sbjct: 210 QSDVWSFGVVLYELFT 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 429 NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
+ E+++G+G G V +G L VA+K L + + + F +E ++ + H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------ 534
+ L G G ++ E+M NG+L L + I+ G LR +
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + N+L+ K++DFGLSR + + TT + PE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SDV++FGVV+ E++
Sbjct: 232 SSASDVWSFGVVMWEVLA 249
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 173 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 229
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 212
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHH 480
+FE R LG G FG VY ++ +A+K+L + + Q + EVE+ + H
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGN----LQALLLGEEADILSWEGRLRIAIEAAK-- 534
N+ L GY + T LI E+ G LQ L +E ++ L A+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+LL + KIADFG S P + TT+ GT YL PE
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRM 186
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE 617
EK D+++ GV+ E + K E
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 408 NGSFELKNQRFS-YSNVLRITNNFERVLGNGGFGTVYHGYLDGT-------EVAVKMLSP 459
N SF K S V R R LG+G FG VY G + G +VAVK L
Sbjct: 18 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 77
Query: 460 -SSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-----L 513
S Q F E ++ + +H+N+ +G + R ++ E MA G+L++ L
Sbjct: 78 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 137
Query: 514 GEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLS----GKFQAKIADFGL 559
+ L+ L +A + A +HRD+ + N LL+ G+ AKI DFG+
Sbjct: 138 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGM 196
Query: 560 SRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+R + + + A P ++ PE ++ T K+D ++FGV+L EI +
Sbjct: 197 ARD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARL 249
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARL 203
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 212
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + +V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARL 203
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IXKDPDXVRKGDARL 203
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 227
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 148 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 204
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + V A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDXVRKGDARL 212
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE-------VAVKMLSPSSAQG-YKQFQAEVELLMRI-HHKNLT 484
LG G FG V G + VAVKML + ++ +E+++L+ I HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 485 TLVGYCDE-GTNRGLIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIA 529
L+G C + G +I EF GNL L + D L+ E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 530 IEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
+ AK +HRD+ + NILLS K KI DFGL+R + V A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD--IXKDPDXVRKGDARL 203
Query: 580 P-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI +
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 70
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 130
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNRLTEKS 597
+ N L++ + K++DFGLSR + + V + + +P PE + ++ + KS
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKFSSKS 186
Query: 598 DVYNFGVVLLEIIT 611
D++ FGV++ EI +
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 146
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNRLTEKS 597
+ N L++ + K++DFGLSR + + V + + +P PE + ++ + KS
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP----PEVLMYSKFSSKS 202
Query: 598 DVYNFGVVLLEIIT 611
D++ FGV++ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 66
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 126
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNRLTEKS 597
+ N L++ + K++DFGLSR + + V + + +P PE + ++ + KS
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKFSSKS 182
Query: 598 DVYNFGVVLLEI 609
D++ FGV++ EI
Sbjct: 183 DIWAFGVLMWEI 194
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY + +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 130
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 131 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 186 LWSLGVLCYEFLVGKPPFE 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 434 LGNGGFGT--VYHGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G G FG + DG + +K ++ S S++ ++ + EV +L + H N+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 490 CDEGTNRGLIYEFMANGNL------QALLLGEEADILSWEGRLRIAIEAAK----VHRDV 539
+E + ++ ++ G+L Q +L +E IL W ++ +A++ +HRD+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDI 151
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
KS NI L+ ++ DFG++R V S + GTP YL PE + KSD+
Sbjct: 152 KSQNIFLTKDGTVQLGDFGIAR---VLNSTVELARACIGTPYYLSPEICENKPYNNKSDI 208
Query: 600 YNFGVVLLEIITSKSVIE 617
+ G VL E+ T K E
Sbjct: 209 WALGCVLYELCTLKHAFE 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+I EFM GNL L +S L +A + + +HR++ +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAA 346
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 347 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFSIKSDVWA 404
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 405 FGVLLWEIAT 414
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 429 NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKN 482
+ E+++G+G G V +G L VA+K L + + + F +E ++ + H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAK------ 534
+ L G G ++ E+M NG+L L + I+ G LR +
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
VHRD+ + N+L+ K++DFGLSR + TT + PE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SDV++FGVV+ E++
Sbjct: 232 SSASDVWSFGVVMWEVLA 249
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 433 VLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQG---YKQFQAEVELLMRIHHKNLTTLV 487
+LG GG V+ D +VAVK+L A+ Y +F+ E + ++H + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 GYCDEGTNRG----LIYEFMANGNLQALLLGEEADILSWEGRL--RIAIEAAK------- 534
+ T G ++ E++ L+ DI+ EG + + AIE
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLR--------DIVHTEGPMTPKRAIEVIADACQALN 130
Query: 535 -------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
+HRDVK NIL+S K+ DFG++R G+ T + GT YL PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSK 613
+ + +SDVY+ G VL E++T +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 71
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 131
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNRLTEKS 597
+ N L++ + K++DFGLSR + + V + + +P PE + ++ + KS
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKFSSKS 187
Query: 598 DVYNFGVVLLEIIT 611
D++ FGV++ EI +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 31/208 (14%)
Query: 432 RVLGNGGFGTVYHGYLDGT-------EVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNL 483
R LG+G FG VY G + G +VAVK L S Q F E ++ + +H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK---- 534
+G + R ++ E MA G+L++ L + L+ L +A + A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 535 ------VHRDVKSTNILLS----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYL 583
+HRD+ + N LL+ G+ AKI DFG++R + + + A P ++
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGMARD--IYRASYYRKGGCAMLPVKWM 227
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE ++ T K+D ++FGV+L EI +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T + GT YL PE EK D
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 189 LWSLGVLCYEFLVGKPPFE 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIA+FG S P + TT+ GT YL PE EK D
Sbjct: 136 IKPENLLLGSAGELKIANFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 191 LWSLGVLCYEFLVGKPPFE 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T+ GT YL PE EK D
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRDTLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 190 LWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 134
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T + GT YL PE EK D
Sbjct: 135 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 190 LWSLGVLCYEFLVGKPPFE 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 146
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNRLTEKS 597
+ N L++ + K++DFGLSR + + V + + +P PE + ++ + KS
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKFSSKS 202
Query: 598 DVYNFGVVLLEIIT 611
D++ FGV++ EI +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T + GT YL PE EK D
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 189 LWSLGVLCYEFLVGKPPFE 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T + GT YL PE EK D
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 189 LWSLGVLCYEFLVGKPPFE 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 43/223 (19%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-------EVAVKMLSPSSAQGYKQ-FQAEVELLMRI-HH 480
F +VLG+G FG V + G +VAVKML + ++ +E++++ ++ H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-------------------LGEEAD--I 519
+N+ L+G C LI+E+ G+L L L EE D +
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 520 LSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569
L++E L A + AK VHRD+ + N+L++ KI DFGL+R +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD--IMSDS 226
Query: 570 THVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+V A P ++ PE T KSDV+++G++L EI +
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T + GT YL PE EK D
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRTDLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 194 LWSLGVLCYEFLVGKPPFE 212
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L E + LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 213
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 487 VGYCDEGTNRGLIYEFMANGN----LQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIA+FG S P + TT+ GT YL PE EK D
Sbjct: 137 IKPENLLLGSAGELKIANFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 192 LWSLGVLCYEFLVGKPPFE 210
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 408 NGSFELKNQRFS-YSNVLRITNNFERVLGNGGFGTVYHGYLDGT-------EVAVKMLSP 459
N SF K S V R R LG+G FG VY G + G +VAVK L
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 460 -SSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-----L 513
S Q F E ++ + +H+N+ +G + R ++ E MA G+L++ L
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 514 GEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLS----GKFQAKIADFGL 559
+ L+ L +A + A +HRD+ + N LL+ G+ AKI DFG+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV-AKIGDFGM 190
Query: 560 SRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ + + + A P ++ PE ++ T K+D ++FGV+L EI +
Sbjct: 191 AQD--IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 77
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 137
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNRLTEKS 597
+ N L++ + K++DFGLSR + + V + + +P PE + ++ + KS
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKFSSKS 193
Query: 598 DVYNFGVVLLEIIT 611
D++ FGV++ EI +
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HR++ +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAA 385
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYN 601
N L+ K+ADFGLSR + H + PE N+ + KSDV+
Sbjct: 386 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTAPESLAYNKFSIKSDVWA 443
Query: 602 FGVVLLEIIT 611
FGV+L EI T
Sbjct: 444 FGVLLWEIAT 453
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHH 480
+FE R LG G FG VY ++ +A+K+L + + Q + EVE+ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK-- 534
N+ L GY + T LI E+ G LQ L +E ++ L A+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+LL + KIADFG S P + T + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----SSRRTXLCGTLDYLPPEMIEGRM 182
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE 617
EK D+++ GV+ E + K E
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G VY G VAVK L + + ++F E ++ I H NL L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 492 EGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK----VHRDVKS 541
+I EFM GNL L +E + +L ++ A+E + +HR++ +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAA 343
Query: 542 TNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVY 600
N L+ K+ADFGLSR + T+ A P + PE N+ + KSDV+
Sbjct: 344 RNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 601 NFGVVLLEIIT 611
FGV+L EI T
Sbjct: 401 AFGVLLWEIAT 411
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 433 VLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQG---YKQFQAEVELLMRIHHKNLTTLV 487
+LG GG V+ D +VAVK+L A+ Y +F+ E + ++H + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 GYCDEGTNRG----LIYEFMANGNLQALLLGEEADILSWEGRL--RIAIEAAK------- 534
+ T G ++ E++ L+ DI+ EG + + AIE
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLR--------DIVHTEGPMTPKRAIEVIADACQALN 130
Query: 535 -------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
+HRDVK NI++S K+ DFG++R G+ T + GT YL PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSK 613
+ + +SDVY+ G VL E++T +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 159
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 160 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRDDLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 215 LWSLGVLCYEFLVGKPPFE 233
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 433 VLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQG---YKQFQAEVELLMRIHHKNLTTLV 487
+LG GG V+ D +VAVK+L A+ Y +F+ E + ++H + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 488 GYCDEGTNRG----LIYEFMANGNLQALLLGEEADILSWEGRL--RIAIEAAK------- 534
+ T G ++ E++ L+ DI+ EG + + AIE
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLR--------DIVHTEGPMTPKRAIEVIADACQALN 130
Query: 535 -------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
+HRDVK NI++S K+ DFG++R G+ T + GT YL PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSK 613
+ + +SDVY+ G VL E++T +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 487 VGYCDEGTNRGLIYEFMANGN----LQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 138
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 139 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRXXLXGTLDYLPPEMIEGRMHDEKVD 193
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 194 LWSLGVLCYEFLVGKPPFE 212
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 19/195 (9%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
F + LG G FG V +G G +VA+KM+ S +F E +++M + H+ L L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 71
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG-----EEADILSWEGRLRIAIEAAK----VHRDV 539
C + +I E+MANG L L + +L + A+E + +HRD+
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 131
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT---IAGTPGYLDPEYYISNRLTEK 596
+ N L++ + K++DFGLSR + ++ T + + +P PE + ++ + K
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSP----PEVLMYSKFSSK 186
Query: 597 SDVYNFGVVLLEIIT 611
SD++ FGV++ EI +
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRAALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 192 LWSLGVLCYEFLVGKPPFE 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 431 ERVLGNGGFGTVYHG--YLDGTEVAVK---MLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
E+ +G G F VY LDG VA+K + A+ E++LL +++H N+
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL--------LGEEADILSWEGRLRIAIEAAK--- 534
E ++ E G+L ++ L E + + +L A+E
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K N+ ++ K+ D GL R F + + H ++ GTP Y+ PE N
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH---SLVGTPYYMSPERIHENGY 213
Query: 594 TEKSDVYNFGVVLLEIITSKS 614
KSD+++ G +L E+ +S
Sbjct: 214 NFKSDIWSLGCLLYEMAALQS 234
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 487 VGYCDEGTNRGLIYEFMANGN----LQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + TT+ GT YL PE EK D
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAP-----SSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 599 VYNFGVVLLEIIT 611
+++ GV+ E +
Sbjct: 193 LWSLGVLCYEFLV 205
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 45/286 (15%)
Query: 432 RVLGNGGFGTVYHGYL---DGT--EVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLT 484
R+LG G FG+V L DG+ +VAVKML ++ ++F E + H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 485 TLVGYCDEGTNRG------LIYEFMANGNLQALLL----GEEADILSWEGRLRIAIEAAK 534
LVG +G +I FM +G+L A LL GE L + +R ++ A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 535 ----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT--PGY 582
+HRD+ + N +L+ +ADFGLSR SG + A +
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI---YSGDYYRQGCASKLPVKW 205
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIV 642
L E N T SDV+ FGV + EI+T + + I + ++++G ++
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRG---QTPYAGIENAEIYNYLIGGNRLKQ-- 260
Query: 643 DPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688
P E+ ++ C S +RP+ + MEL L
Sbjct: 261 PPECMEE--------VYDLMYQCWSADPKQRPSFTCLRMELENILG 298
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 198
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 189 LWSLGVLCYEFLVGKPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHH 480
+FE R LG G FG VY ++ +A+K+L + + Q + EVE+ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK-- 534
N+ L GY + T LI E+ G LQ L +E ++ L A+
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+LL + KIADFG S P + + GT YL PE
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----SSRRAALCGTLDYLPPEMIEGRM 182
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE 617
EK D+++ GV+ E + K E
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 135
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 136 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRXXLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 191 LWSLGVLCYEFLVGKPPFE 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 46/218 (21%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R H+
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI------HHIDXXKKT 209
Query: 579 TPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
T G ++ PE T +SDV++FGV+L EI T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 206
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 207 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 205
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 206 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 202
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 203 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 213
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G T+VAVKML S ++ + +E+E++ I HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRI 528
+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 529 AIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTNGR 213
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHH 480
+FE R LG G FG VY ++ +A+K+L + + Q + EVE+ + H
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK-- 534
N+ L GY + T LI E+ G LQ L +E ++ L A+
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+LL + KIADFG S P + + GT YL PE
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----SSRRDDLCGTLDYLPPEMIEGRM 185
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE 617
EK D+++ GV+ E + K E
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 134 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRXXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 189 LWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 487 VGYCDEGTNRGLIYEFMANG----NLQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRD 136
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + + GT YL PE EK D
Sbjct: 137 IKPENLLLGSAGELKIADFGWSVHAP-----SSRRXXLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 599 VYNFGVVLLEIITSKSVIE 617
+++ GV+ E + K E
Sbjct: 192 LWSLGVLCYEFLVGKPPFE 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG---- 581
VHRD+ + N +++ F KI DFG++R G G
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------XETDXXRKGGKGLLPV 196
Query: 582 -YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIES 640
++ PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL-- 251
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG---- 581
VHRD+ + N +++ F KI DFG++R G G
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------XETDXXRKGGKGLLPV 196
Query: 582 -YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIES 640
++ PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGG---- 249
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
+ D N + ++ C RPT ++V L + L
Sbjct: 250 ------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 432 RVLGNGGFGTVYHGYLDG---------TEVAVKML-SPSSAQGYKQFQAEVELLMRI-HH 480
+ LG G FG V G T+VAVKML S ++ + +E+E++ I H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRL 526
KN+ L+G C + +I E+ + GNL+ L + LS + +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
A + A+ +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD--IHHIDYYKKTTN 252
Query: 577 AGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV+L EI T
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ TL+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 127 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------XETDXXR 180
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 237
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N +E+ C RP+ +++ + E +
Sbjct: 238 VMEGGLL----------DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEM 283
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG---- 581
VHRD+ + N +++ F KI DFG++R G G
Sbjct: 140 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------XETDXXRKGGKGLLPV 193
Query: 582 -YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIES 640
++ PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL-- 248
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 249 --------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 424 LRITNNFE----RVLGNGGFGTVYHG-YLDGTE-----VAVKMLSPSSA-QGYKQFQAEV 472
LRI E +VLG+G FGTVY G ++ E VA+K+L+ ++ + +F E
Sbjct: 9 LRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA 68
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
++ + H +L L+G C T + L+ + M +G L + E D + + L ++
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQI 126
Query: 533 AK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-G 581
AK VHRD+ + N+L+ KI DFGL+R +EG P
Sbjct: 127 AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL--LEGDEKEYNADGGKMPIK 184
Query: 582 YLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------XETDXXR 189
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 246
Query: 632 MLGKG 636
++ G
Sbjct: 247 VMEGG 251
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT-------EVAVKML-SPSSAQGYKQFQAEVELLMRI-H 479
F + LG G FG V G +VAVKML S + A + +E++++ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL------------------LGEEADILS 521
H+N+ L+G C G +I E+ G+L L D+L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 522 WEGRLR--IAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
+ ++ +A A+K +HRDV + N+LL+ AKI DFGL+R + ++ A
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD--IMNDSNYIVKGNA 226
Query: 578 GTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV+++G++L EI +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
LGNG + TVY G G VA+K + S +G E+ L+ + H+N+ L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 491 DEGTNRGLIYEFMAN-----------GNLQALLLGEEADILSWE--GRLRIAIEAAKVHR 537
L++EFM N GN L W+ L E +HR
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHR 132
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
D+K N+L++ + Q K+ DFGL+R F PV + V T Y P+ + +R
Sbjct: 133 DLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW-----YRAPDVLMGSRTYS 187
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTHE 621
S D+++ G +L E+IT K + T++
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 434 LGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG V+ G L D T VAVK + K +F E +L + H N+ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+ ++ E + G+ L E A L + L++ +AA +HRD+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT-TIAGTP-GYLDPEYYISNRLTEKSD 598
+ N L++ K KI+DFG+SR E G + + + P + PE R + +SD
Sbjct: 241 ARNCLVTEKNVLKISDFGMSRE---EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 599 VYNFGVVLLEIIT 611
V++FG++L E +
Sbjct: 298 VWSFGILLWETFS 310
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 424 LRITNNFE----RVLGNGGFGTVYHG-YLDGTE-----VAVKMLSPSSA-QGYKQFQAEV 472
LRI E +VLG+G FGTVY G ++ E VA+K+L+ ++ + +F E
Sbjct: 32 LRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEA 91
Query: 473 ELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
++ + H +L L+G C T + L+ + M +G L + E D + + L ++
Sbjct: 92 LIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQI 149
Query: 533 AK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-G 581
AK VHRD+ + N+L+ KI DFGL+R EG P
Sbjct: 150 AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIK 207
Query: 582 YLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY ++ +A+K+L + + Q + EVE+ + H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 487 VGYCDEGTNRGLIYEFMANGN----LQALLLGEEADILSWEGRLRIAIEAAK----VHRD 538
GY + T LI E+ G LQ L +E ++ L A+ +HRD
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K N+LL + KIADFG S P + T+ GT YL PE EK D
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAP-----SSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 599 VYNFGVVLLEIIT 611
+++ GV+ E +
Sbjct: 193 LWSLGVLCYEFLV 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 34/215 (15%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT-------EVAVKML-SPSSAQGYKQFQAEVELLMRI-H 479
F + LG G FG V G +VAVKML S + A + +E++++ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA------------------DILS 521
H+N+ L+G C G +I E+ G+L L + D+L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 522 WEGRLR--IAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
+ ++ +A A+K +HRDV + N+LL+ AKI DFGL+R + ++ A
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD--IMNDSNYIVKGNA 226
Query: 578 GTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV+++G++L EI +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DG----TEVAVKMLSP-SSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G DG VA+K+L +S + K+ E
Sbjct: 10 LLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDE 69
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL------LGEEADILSWEGR 525
++ + ++ L+G C T + L+ + M G L + LG + D+L+W +
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQ-DLLNWCMQ 127
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
+ + + VHRD+ + N+L+ KI DFGL+R ++ + H P
Sbjct: 128 IAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG--GKVPI 185
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + R T +SDV+++GV + E++T
Sbjct: 186 KWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 425 RITNNFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN 482
R + LG G +G VY G VAVK L + + ++F E ++ I H N
Sbjct: 31 RTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPN 89
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLL---GEEAD---ILSWEGRLRIAIEAAK-- 534
L L+G C ++ E+M GNL L EE +L ++ A+E +
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+ + N L+ K+ADFGLSR + H + PE N
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNT 207
Query: 593 LTEKSDVYNFGVVLLEIIT 611
+ KSDV+ FGV+L EI T
Sbjct: 208 FSIKSDVWAFGVLLWEIAT 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 432 RVLGNGGFGTVYHGYL---DGT--EVAVKM--LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
++LG G FG+V G L DGT +VAVK L SS + ++F +E + H N+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 485 TLVGYCDEGTNRGL-----IYEFMANGNLQALLLGEEADI----LSWEGRLRIAIEAAK- 534
L+G C E +++G+ I FM G+L LL + + + L+ ++ A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLD 584
+HRD+ + N +L +ADFGLS+ + + IA P ++
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK--IYSGDYYRQGRIAKMPVKWIA 217
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIIT 611
E T KSDV+ FGV + EI T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG---- 581
VHRD+ + N +++ F KI DFG++R G G
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI------YETAYYRKGGKGLLPV 196
Query: 582 -YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIES 640
++ PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL-- 251
Query: 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 252 --------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 39/207 (18%)
Query: 430 FERVLGNGGFGTVY--HGYLDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKN 482
++ +G G F V L G EVAVK+ L+P+S Q K F+ EV ++ ++H N
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ--KLFR-EVRIMKILNHPN 75
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------- 534
+ L + L+ E+ A+G GE D L GR++ AK
Sbjct: 76 IVKLFEVIETEKTLYLVMEY-ASG-------GEVFDYLVAHGRMKEKEARAKFRQIVSAV 127
Query: 535 --------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
VHRD+K+ N+LL G KIADFG S F V T G+P Y PE
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK----LDTFCGSPPYAAPE 183
Query: 587 YYISNRLT-EKSDVYNFGVVLLEIITS 612
+ + + DV++ GV+L +++
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRT------FPVEGSGTHVTTTIAGT 579
VHRD+ + N +++ F KI DFG++R + G G +A
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-- 200
Query: 580 PGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE 639
PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 201 -----PESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 640 SIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 252 ---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 195
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 252
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N E+ C RP+ +++ + E +
Sbjct: 253 VMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 430 FERVLGNGGFGTVYHGYLDGT-------EVAVKML-SPSSAQGYKQFQAEVELLMRI-HH 480
F + LG G FG V G +VAVKML S + A + +E++++ + H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------------DIL 520
+N+ L+G C G +I E+ G+L L + D+L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 521 SWEGRLR--IAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
+ ++ +A A+K +HRDV + N+LL+ AKI DFGL+R + ++
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD--IMNDSNYIVKGN 227
Query: 577 AGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
A P ++ PE T +SDV+++G++L EI +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 433 VLGNGGFGTVYHGYLD---GTEVAVKMLSPSSAQG---YKQFQAEVELLMRIHHKNLTTL 486
+LG GG V H D +VAVK+L A+ Y +F+ E + ++H + +
Sbjct: 19 ILGFGGMSEV-HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 487 VGYCDEGTNRG----LIYEFMANGNLQALLLGEEADILSWEGRL--RIAIEAAK------ 534
+ T G ++ E++ L+ DI+ EG + + AIE
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLR--------DIVHTEGPMTPKRAIEVIADACQAL 129
Query: 535 --------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
+HRDVK NI++S K+ DFG++R G+ T + GT YL PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 587 YYISNRLTEKSDVYNFGVVLLEIITSK 613
+ + +SDVY+ G VL E++T +
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 30/263 (11%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGYKQFQAEVELLMRIHHKNLTT 485
ER+ G G FG V+ G + T+ VA+K++ + + Q E+ +L + +T
Sbjct: 27 KLERI-GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA-------AKVHRD 538
G +G+ +I E++ G+ LL D L+ ++ K+HRD
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRD 145
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT-TTIAGTPGYLDPEYYISNRLTEKS 597
+K+ N+LLS + K+ADFG++ + T + T GTP ++ PE + K+
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQL----TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 598 DVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657
D+++ G+ +E+ E + +H + V F++ K + ++V D +K
Sbjct: 202 DIWSLGITAIELAKG----EPPNSDMHPMR-VLFLIPKNNPPTLVG-------DFTKSFK 249
Query: 658 TVEIAMACVSQTSTKRPTMNQVV 680
E AC+++ + RPT +++
Sbjct: 250 --EFIDACLNKDPSFRPTAKELL 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 434 LGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG V+ G L D T VAVK + K +F E +L + H N+ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+ ++ E + G+ L E A L + L++ +AA +HRD+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT-TIAGTP-GYLDPEYYISNRLTEKSD 598
+ N L++ K KI+DFG+SR E G + + P + PE R + +SD
Sbjct: 241 ARNCLVTEKNVLKISDFGMSRE---EADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 599 VYNFGVVLLEIIT 611
V++FG++L E +
Sbjct: 298 VWSFGILLWETFS 310
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKNTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 266
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 31/198 (15%)
Query: 434 LGNGGFGTVYHGYLDGTEV--AVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG+G FG VY T V A K++ S + + + E+++L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-----------VHRDVK 540
N ++ EF A G + A++L E + E ++++ + +HRD+K
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 541 STNILLSGKFQAKIADFGLS----RTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE- 595
+ NIL + K+ADFG+S RT S GTP ++ PE + +
Sbjct: 163 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDS-------FIGTPYWMAPEVVMCETSKDR 215
Query: 596 ----KSDVYNFGVVLLEI 609
K+DV++ G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 433 VLGNGGFGTVYHGYLD---GTEVAVKMLSPSSAQG---YKQFQAEVELLMRIHHKNLTTL 486
+LG GG V H D +VAVK+L A+ Y +F+ E + ++H + +
Sbjct: 19 ILGFGGMSEV-HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 487 VGYCDEGTNRG----LIYEFMANGNLQALLLGEEADILSWEGRL--RIAIEAAK------ 534
+ T G ++ E++ L+ DI+ EG + + AIE
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLR--------DIVHTEGPMTPKRAIEVIADACQAL 129
Query: 535 --------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
+HRDVK NI++S K+ DFG++R G+ T + GT YL PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 587 YYISNRLTEKSDVYNFGVVLLEIITSK 613
+ + +SDVY+ G VL E++T +
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y + T VA+K +SP Q Y Q E+++L+R H+N+ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 491 DEGTNRGL----IYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKVHRD 538
T + I + + +L LL ++ D + + G L+ A +HRD
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRG-LKYIHSANVLHRD 169
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS- 597
+K +N+L++ KI DFGL+R E T T T Y PE ++++ KS
Sbjct: 170 LKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSI 229
Query: 598 DVYNFGVVLLEIITSKSVIERTH 620
D+++ G +L E+++++ + H
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 188
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 245
Query: 632 MLGKG 636
++ G
Sbjct: 246 VMEGG 250
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDXXKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDXXKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRT------FPVEGSGTHVTTTIAGT 579
VHRD+ + N +++ F KI DFG++R + G G +A
Sbjct: 142 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-- 199
Query: 580 PGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE 639
PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 200 -----PESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL- 250
Query: 640 SIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 251 ---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 434 LGNGGFGTVYHGYLDGTEV--AVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG+G FG VY T V A K++ S + + + E+++L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-----------VHRDVK 540
N ++ EF A G + A++L E + E ++++ + +HRD+K
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE----- 595
+ NIL + K+ADFG+S + GTP ++ PE + +
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK---NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 596 KSDVYNFGVVLLEI 609
K+DV++ G+ L+E+
Sbjct: 220 KADVWSLGITLIEM 233
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 207
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 189
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 246
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N E+ C RP+ +++ + E +
Sbjct: 247 VMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 186
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 243
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N E+ C RP+ +++ + E +
Sbjct: 244 VMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 289
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 424 LRITNNFERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
+R T F VLG+G F V+ L G A+K + S A + E+ +L +I H+
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWE--GRLRIAIEAA 533
N+ TL + T+ L+ + ++ G L + + ++A ++ + ++ E
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 534 KVHRDVKSTNIL-LSGKFQAKI--ADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
VHRD+K N+L L+ + +KI DFGLS+ +E +G + +T GTPGY+ PE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNG--IMSTACGTPGYVAPEVLAQ 181
Query: 591 NRLTEKSDVYNFGVV 605
++ D ++ GV+
Sbjct: 182 KPYSKAVDCWSIGVI 196
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADIL--------SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L + S +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 195
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 252
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N E+ C RP+ +++ + E +
Sbjct: 253 VMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 188
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 245
Query: 632 MLGKG 636
++ G
Sbjct: 246 VMEGG 250
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 182
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 239
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N E+ C RP+ +++ + E +
Sbjct: 240 VMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 285
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 212
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 209
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 43/224 (19%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT-------EVAVKML-SPSSAQGYKQFQAEVELLMRI-H 479
F + LG G FG V G +VAVKML S + A + +E++++ +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-------LG------------------ 514
H+N+ L+G C G +I E+ G+L L LG
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 515 --EEADILSWEGRLR--IAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS 568
E D+L + ++ +A A+K +HRDV + N+LL+ AKI DFGL+R +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD--IMND 211
Query: 569 GTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ A P ++ PE T +SDV+++G++L EI +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 433 VLGNGGFGTVYHGYLD---GTEVAVKMLSPSSAQG---YKQFQAEVELLMRIHHKNLTTL 486
+LG GG V H D +VAVK+L A+ Y +F+ E + ++H + +
Sbjct: 36 ILGFGGMSEV-HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 487 VGYCDEGTNRG----LIYEFMANGNLQALLLGEEADILSWEGRL--RIAIEAAK------ 534
+ T G ++ E++ L+ DI+ EG + + AIE
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLR--------DIVHTEGPMTPKRAIEVIADACQAL 146
Query: 535 --------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
+HRDVK NI++S K+ DFG++R G+ T + GT YL PE
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 587 YYISNRLTEKSDVYNFGVVLLEIITSK 613
+ + +SDVY+ G VL E++T +
Sbjct: 207 QARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 420 YSNVLRITN--NFERVLGN-GGFGTVYHGYLDGTEV--AVKMLSPSSAQGYKQFQAEVEL 474
Y +V R N +F ++G G FG VY T V A K++ S + + + E+++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK 534
L H N+ L+ N ++ EF A G + A++L E + E ++++ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTL 118
Query: 535 -----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT--TTIAGTPG 581
+HRD+K+ NIL + K+ADFG+S + + T + + GTP
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPY 174
Query: 582 YLDPEYYISNRLTE-----KSDVYNFGVVLLEI 609
++ PE + + K+DV++ G+ L+E+
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N +++ F KI DFG++R
Sbjct: 164 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYR 217
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 274
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N E+ C RP+ +++ + E +
Sbjct: 275 VMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 320
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 24/201 (11%)
Query: 433 VLGNGGFG-TVYHGYLDGTEVAV-KMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
VLG G FG + + + EV V K L + + F EV+++ + H N+ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+ I E++ G L+ ++ ++ W R+ A + A +HRD+
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGS-----------GTHVTTTIAGTPGYLDPEYYI 589
S N L+ +ADFGL+R E + T+ G P ++ PE
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN 195
Query: 590 SNRLTEKSDVYNFGVVLLEII 610
EK DV++FG+VL EII
Sbjct: 196 GRSYDEKVDVFSFGIVLCEII 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I E+ + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ +IADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARD--INNIDYYKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 434 LGNGGFGTVYHGYLDGTEV--AVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG+G FG VY T V A K++ S + + + E+++L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-----------VHRDVK 540
N ++ EF A G + A++L E + E ++++ + +HRD+K
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE----- 595
+ NIL + K+ADFG+S GTP ++ PE + +
Sbjct: 163 AGNILFTLDGDIKLADFGVSAK---NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 596 KSDVYNFGVVLLEI 609
K+DV++ G+ L+E+
Sbjct: 220 KADVWSLGITLIEM 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI---IGIN 91
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 50/296 (16%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----EEADIL---SWEGRL 526
+ + ++ L+G +G +I E M G+L++ L E +L S +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 527 RIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576
++A E A VHRD+ + N ++ F KI DFG++R
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI------YETDYYR 182
Query: 577 AGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631
G G ++ PE T SDV++FGVVL EI T + E+ ++ + Q + F
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRF 239
Query: 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
++ G + D N +E+ C RP+ +++ + E +
Sbjct: 240 VMEGGLL----------DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEM 285
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 122/303 (40%), Gaps = 64/303 (21%)
Query: 423 VLRITNNFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYK-QFQAEVEL 474
V R R LG G FG VY G G T VA+K ++ +++ + +F E +
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL---------------------- 512
+ + ++ L+G +G +I E M G+L++ L
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 513 --LGEEADILSWEGRLRIAIEAAK-VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569
GE AD +++ + A K VHRD+ + N +++ F KI DFG++R
Sbjct: 132 QMAGEIADGMAY-------LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 178
Query: 570 THVTTTIAGTPG-----YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIH 624
G G ++ PE T SDV++FGVVL EI T + E+ ++ +
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLS 235
Query: 625 ITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELN 684
Q + F++ G + D N E+ C RP+ +++ +
Sbjct: 236 NEQVLRFVMEGGLL----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
Query: 685 ESL 687
E +
Sbjct: 286 EEM 288
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 136
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + +V P + PE +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+ +G G F V L G EVA+K+ L+P+S Q K F+ EV ++ ++H N+
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ--KLFR-EVRIMKILNHPNIV 74
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------V 535
L + LI E+ + G + L+ + E R R + A + V
Sbjct: 75 KLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT- 594
HRD+K+ N+LL KIADFG S F V G T G+P Y PE + +
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGK----LDTFCGSPPYAAPELFQGKKYDG 189
Query: 595 EKSDVYNFGVVLLEIITS 612
+ DV++ GV+L +++
Sbjct: 190 PEVDVWSLGVILYTLVSG 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRT------FPVEGSGTHVTTTIAGT 579
VHR++ + N +++ F KI DFG++R + G G +A
Sbjct: 144 MAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-- 201
Query: 580 PGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE 639
PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 202 -----PESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL- 252
Query: 640 SIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 253 ---------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 91
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRG-LKYIHSANVL 150
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 432 RVLGNGGFGTVYHG----YLDG---TEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKNL 483
R LG G FG VY G + G T VAVK ++ S++ + +F E ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--------LRIAIEAAK- 534
L+G +G ++ E MA+G+L++ L + + GR +++A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRT------FPVEGSGTHVTTTIAGT 579
VHR++ + N +++ F KI DFG++R + G G +A
Sbjct: 143 MAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-- 200
Query: 580 PGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE 639
PE T SD+++FGVVL EI S+ E+ ++ + Q + F++ G +
Sbjct: 201 -----PESLKDGVFTTSSDMWSFGVVLWEIT---SLAEQPYQGLSNEQVLKFVMDGGYL- 251
Query: 640 SIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687
D N + ++ C RPT ++V L + L
Sbjct: 252 ---------DQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 85
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 145
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 85
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 145
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 206 SIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 92
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 152
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 213 SIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 91
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 93
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 153
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 214 SIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 84
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 144
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 205 SIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 91
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 212 SIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 132
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + +V P + PE +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 132
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + +V P + PE +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 29/258 (11%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG V+ G + T+ VA+K++ + + Q E+ +L + +T G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA-------AKVHRDVKSTN 543
+ T +I E++ G+ LL D LR ++ K+HRD+K+ N
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN 154
Query: 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVT-TTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
+LLS + K+ADFG++ + T + T GTP ++ PE + K+D+++
Sbjct: 155 VLLSEHGEVKLADFGVAGQL----TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 210
Query: 603 GVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIA 662
G+ +E+ E H +H + V F++ K + P L ++ E
Sbjct: 211 GITAIELARG----EPPHSELHPMK-VLFLIPKNN-----PPTLEGNYS----KPLKEFV 256
Query: 663 MACVSQTSTKRPTMNQVV 680
AC+++ + RPT +++
Sbjct: 257 EACLNKEPSFRPTAKELL 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 29/258 (11%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG V+ G + T+ VA+K++ + + Q E+ +L + +T G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA-------AKVHRDVKSTN 543
+ T +I E++ G+ LL D LR ++ K+HRD+K+ N
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN 134
Query: 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVT-TTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
+LLS + K+ADFG++ + T + T GTP ++ PE + K+D+++
Sbjct: 135 VLLSEHGEVKLADFGVAGQL----TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 603 GVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIA 662
G+ +E+ E H +H + V F++ K + P L ++ E
Sbjct: 191 GITAIELARG----EPPHSELHPMK-VLFLIPKNN-----PPTLEGNYSK----PLKEFV 236
Query: 663 MACVSQTSTKRPTMNQVV 680
AC+++ + RPT +++
Sbjct: 237 EACLNKEPSFRPTAKELL 254
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYKQ-FQAEVELLMRI-H 479
+F + LG G FG V G VAVKML PS+ ++ +E+++L + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADIL------------------- 520
H N+ L+G C G +I E+ G+L L + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 521 -----SWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
S++ +A A+K +HRD+ + NILL+ KI DFGL+R ++ +V
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD--IKNDSNYVV 226
Query: 574 TTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM 632
A P ++ PE + T +SDV+++G+ L E+ + S + + + M
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS---SPYPGMPVDSKFYKM 283
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691
+ +G ++ P H ++ + KT C KRPT Q+V + + ++ T
Sbjct: 284 IKEG--FRMLSPE-HAPAEMYDIMKT------CWDADPLKRPTFKQIVQLIEKQISEST 333
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I + + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + +V P + PE +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHYVMQEHRKVPFAWCAPESLKTRTF 201
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 136
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + +V P + PE +
Sbjct: 137 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYKQ-FQAEVELLMRI-H 479
+F + LG G FG V G VAVKML PS+ ++ +E+++L + +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADIL------------------- 520
H N+ L+G C G +I E+ G+L L + +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 521 -----SWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
S++ +A A+K +HRD+ + NILL+ KI DFGL+R ++ +V
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD--IKNDSNYVV 221
Query: 574 TTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM 632
A P ++ PE + T +SDV+++G+ L E+ + S + + + M
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS---SPYPGMPVDSKFYKM 278
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691
+ +G ++ P H ++ + KT C KRPT Q+V + + ++ T
Sbjct: 279 IKEG--FRMLSPE-HAPAEMYDIMKT------CWDADPLKRPTFKQIVQLIEKQISEST 328
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYKQ-FQAEVELLMRI-H 479
+F + LG G FG V G VAVKML PS+ ++ +E+++L + +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADIL------------------- 520
H N+ L+G C G +I E+ G+L L + +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 521 -----SWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
S++ +A A+K +HRD+ + NILL+ KI DFGL+R ++ +V
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD--IKNDSNYVV 203
Query: 574 TTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM 632
A P ++ PE + T +SDV+++G+ L E+ + S + + + M
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS---SPYPGMPVDSKFYKM 260
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691
+ +G ++ P H ++ + KT C KRPT Q+V + + ++ T
Sbjct: 261 IKEG--FRMLSPE-HAPAEMYDIMKT------CWDADPLKRPTFKQIVQLIEKQISEST 310
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 28/258 (10%)
Query: 434 LGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
LG+G FG V G G +VAVKM+ S + FQ E + +M++ H L G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74
Query: 493 GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKST 542
++ E+++NG L L L L + + + +HRD+ +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAAR 133
Query: 543 NILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
N L+ K++DFG++R + + V T + PE + + + KSDV+ F
Sbjct: 134 NCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK--WSAPEVFHYFKYSSKSDVWAF 191
Query: 603 GVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIA 662
G+++ E+ + + + ++ V + +G + P L D +I
Sbjct: 192 GILMWEVFS----LGKMPYDLYTNSEVVLKVSQG--HRLYRPHLASD-------TIYQIM 238
Query: 663 MACVSQTSTKRPTMNQVV 680
+C + KRPT Q++
Sbjct: 239 YSCWHELPEKRPTFQQLL 256
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYKQ-FQAEVELLMRI-H 479
+F + LG G FG V G VAVKML PS+ ++ +E+++L + +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADIL------------------- 520
H N+ L+G C G +I E+ G+L L + +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 521 -----SWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
S++ +A A+K +HRD+ + NILL+ KI DFGL+R ++ +V
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD--IKNDSNYVV 219
Query: 574 TTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM 632
A P ++ PE + T +SDV+++G+ L E+ + S + + + M
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS---SPYPGMPVDSKFYKM 276
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691
+ +G ++ P H ++ + KT C KRPT Q+V + + ++ T
Sbjct: 277 IKEG--FRMLSPE-HAPAEMYDIMKT------CWDADPLKRPTFKQIVQLIEKQISEST 326
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 50/299 (16%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQGYKQ-FQAEVELLMRI-H 479
+F + LG G FG V G VAVKML PS+ ++ +E+++L + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADIL------------------- 520
H N+ L+G C G +I E+ G+L L + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 521 -----SWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
S++ +A A+K +HRD+ + NILL+ KI DFGL+R ++ +V
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARH--IKNDSNYVV 226
Query: 574 TTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM 632
A P ++ PE + T +SDV+++G+ L E+ + S + + + M
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS---SPYPGMPVDSKFYKM 283
Query: 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691
+ +G ++ P H ++ + KT C KRPT Q+V + + ++ T
Sbjct: 284 IKEG--FRMLSPE-HAPAEMYDIMKT------CWDADPLKRPTFKQIVQLIEKQISEST 333
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 434 LGNGGFGTVYH--GYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V L G E A K+++ SA+ +++ + E + + H N+ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAI----EAAKVHRDVKS 541
E + LI++ + G L ++ E AD ++ A+ + VHRD+K
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 149
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ VEG AGTPGYL PE + + D
Sbjct: 150 ENLLLASKLKGAAVKLADFGLA--IEVEGE-QQAWFGFAGTPGYLSPEVLRKDPYGKPVD 206
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 207 LWACGVIL 214
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA++ +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 91
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 150
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 87
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 146
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V G E A K+++ SA+ +++ + E + ++ H N+ L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAIEAAK----VHRDVKS 541
E + L+++ + G L ++ E AD ++ +I VHR++K
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ +E + + AGTPGYL PE + ++ D
Sbjct: 134 ENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 190 IWACGVIL 197
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 89
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 148
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 87
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V G E A K+++ SA+ +++ + E + ++ H N+ L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAIEAAK----VHRDVKS 541
E + L+++ + G L ++ E AD ++ +I VHR++K
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 133
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ +E + + AGTPGYL PE + ++ D
Sbjct: 134 ENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 190 IWACGVIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V G E A K+++ SA+ +++ + E + ++ H N+ L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAIEAAK----VHRDVKS 541
E + L+++ + G L ++ E AD ++ +I VHR++K
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP 132
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ +E + + AGTPGYL PE + ++ D
Sbjct: 133 ENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 189 IWACGVIL 196
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 132
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + V P + PE +
Sbjct: 133 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 87
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 417 RFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYK-QFQAEVE 473
R+ + +R +F VLG G F V T+ VA+K ++ + +G + + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 474 LLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWE--GR 525
+L +I H N+ L + G + LI + ++ G L + +A L ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 526 LRIAIEAAKVHRDVKSTNIL---LSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
++ + VHRD+K N+L L + I+DFGLS+ +E G+ V +T GTPGY
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS-VLSTACGTPGY 184
Query: 583 LDPEYYISNRLTEKSDVYNFGVV 605
+ PE ++ D ++ GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 417 RFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYK-QFQAEVE 473
R+ + +R +F VLG G F V T+ VA+K ++ + +G + + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 474 LLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWE--GR 525
+L +I H N+ L + G + LI + ++ G L + +A L ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 526 LRIAIEAAKVHRDVKSTNIL---LSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
++ + VHRD+K N+L L + I+DFGLS+ +E G+ V +T GTPGY
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS-VLSTACGTPGY 184
Query: 583 LDPEYYISNRLTEKSDVYNFGVV 605
+ PE ++ D ++ GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE---------VAVKMLSP-SSAQGYKQFQAEVELLMRI-HHKN 482
LG G FG V G + VAVKML ++ + +E+E++ I HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------ADILSW 522
+ L+G C + +I + + GNL+ L D++S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 523 EGRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+L +E +HRD+ + N+L++ KIADFGL+R + + TT
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDYYKKTTNGR 220
Query: 579 TP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
P ++ PE T +SDV++FGV++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 95
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 154
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 215 KSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 87
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 146
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 417 RFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYK-QFQAEVE 473
R+ + +R +F VLG G F V T+ VA+K ++ + +G + + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 474 LLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWE--GR 525
+L +I H N+ L + G + LI + ++ G L + +A L ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 526 LRIAIEAAKVHRDVKSTNIL---LSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
++ + VHRD+K N+L L + I+DFGLS+ +E G+ V +T GTPGY
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS-VLSTACGTPGY 184
Query: 583 LDPEYYISNRLTEKSDVYNFGVV 605
+ PE ++ D ++ GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 107
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA-----------------IEAA 533
D R E M + L L+G AD+ ++ I +A
Sbjct: 108 D--IIRAPTIEQMKDVYLVTHLMG--ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 534 KV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
V HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 593 LTEKS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 417 RFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYK-QFQAEVE 473
R+ + +R +F VLG G F V T+ VA+K ++ + +G + + E+
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 474 LLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWE--GR 525
+L +I H N+ L + G + LI + ++ G L + +A L ++
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 526 LRIAIEAAKVHRDVKSTNIL---LSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
++ + VHRD+K N+L L + I+DFGLS+ +E G+ V +T GTPGY
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGS-VLSTACGTPGY 184
Query: 583 LDPEYYISNRLTEKSDVYNFGVV 605
+ PE ++ D ++ GV+
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 24/198 (12%)
Query: 434 LGNGGFGTVYHGYLDG-----TEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTT 485
LG+G FG V G D VAVK L P S + F EV + + H+NL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL-RIAIEAAK---------- 534
L G + ++ E G+L L + L G L R A++ A+
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESKRF 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + N+LL+ + KI DFGL R P + V P + PE +
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALP-QNDDHXVMQEHRKVPFAWCAPESLKTRTF 201
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD + FGV L E+ T
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+ +G G F V L G EVA+K+ L+P+S Q K F+ EV ++ ++H N+
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ--KLFR-EVRIMKILNHPNIV 77
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------V 535
L + LI E+ + G + L+ + E R R + A + V
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT- 594
HRD+K+ N+LL KIADFG S F V G G P Y PE + +
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGK----LDAFCGAPPYAAPELFQGKKYDG 192
Query: 595 EKSDVYNFGVVLLEIITS 612
+ DV++ GV+L +++
Sbjct: 193 PEVDVWSLGVILYTLVSG 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 414 KNQRFSYSNVLRITNNFE--RVLGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQ 467
+ F + + ++N++ LG G F V G E A K+++ SA+ +++
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK 74
Query: 468 FQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWE 523
+ E + ++ H N+ L E + L+++ + G L ++ E AD
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI 134
Query: 524 GRLRIAIEAAK----VHRDVKSTNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTI 576
++ +I VHR++K N+LL+ K + K+ADFGL+ +E + +
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAWHGF 190
Query: 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVL 606
AGTPGYL PE + ++ D++ GV+L
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 87
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 208 SIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 91
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 150
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T Y PE ++++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y L+ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 92
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 151
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T Y PE ++++
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+R H+N+ +G
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---IGIN 107
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEA--DILSW------EGRLRIAIEAAKV 535
D E I + + +L LL + D + + G L+ A +
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG-LKYIHSANVL 166
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+K +N+LL+ KI DFGL+R + T T T Y PE ++++
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 596 KS-DVYNFGVVLLEIITSKSVIERTH 620
KS D+++ G +L E+++++ + H
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 432 RVLGNGGFG-----TVYH--GYLDGTEVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
+ LG G FG T +H G T VAVKML +S + +E +L +++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------------- 516
L G C + LI E+ G+L+ L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 517 -ADILSWEGRLRIAI----EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571
D++S+ ++ + E VHRD+ + NIL++ + KI+DFGLSR E S +
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--Y 206
Query: 572 VTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
V + P ++ E + T +SDV++FGV+L EI+T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 29/258 (11%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG V+ G + T+ VA+K++ + + Q E+ +L + +T G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA-------AKVHRDVKSTN 543
+ T +I E++ G+ LL D LR ++ K+HRD+K+ N
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN 149
Query: 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVT-TTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
+LLS + K+ADFG++ + T + GTP ++ PE + K+D+++
Sbjct: 150 VLLSEHGEVKLADFGVAGQL----TDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 205
Query: 603 GVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIA 662
G+ +E+ E H +H + V F++ K + ++ + N E
Sbjct: 206 GITAIELARG----EPPHSELHPMK-VLFLIPKNNPPTL---------EGNYSKPLKEFV 251
Query: 663 MACVSQTSTKRPTMNQVV 680
AC+++ + RPT +++
Sbjct: 252 EACLNKEPSFRPTAKELL 269
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
RVLG GGFG V+ + T + +GY+ E ++L ++H + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG--------EEADILSWEGRLRIAIEAAK---- 534
+ T+ L+ M G+++ + +E + + ++ +E
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K N+LL +I+D GL+ +G T AGTPG++ PE +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 595 EKSDVYNFGVVLLEIITSKSVIERTHERIH 624
D + GV L E+I ++ E++
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
RVLG GGFG V+ + T + +GY+ E ++L ++H + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG--------EEADILSWEGRLRIAIEAAK---- 534
+ T+ L+ M G+++ + +E + + ++ +E
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K N+LL +I+D GL+ +G T AGTPG++ PE +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 595 EKSDVYNFGVVLLEIITSKSVIERTHERIH 624
D + GV L E+I ++ E++
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
RVLG GGFG V+ + T + +GY+ E ++L ++H + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG--------EEADILSWEGRLRIAIEAAK---- 534
+ T+ L+ M G+++ + +E + + ++ +E
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K N+LL +I+D GL+ +G T AGTPG++ PE +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 595 EKSDVYNFGVVLLEIITSKSVIERTHERIH 624
D + GV L E+I ++ E++
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
RVLG GGFG V+ + T + +GY+ E ++L ++H + + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG--------EEADILSWEGRLRIAIEAAK---- 534
+ T+ L+ M G+++ + +E + + ++ +E
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K N+LL +I+D GL+ +G T AGTPG++ PE +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 595 EKSDVYNFGVVLLEIITSKSVIERTHERIH 624
D + GV L E+I ++ E++
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 430 FERVLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
FE++ G G GTVY G EVA++ ++ Q K+ L+MR +KN +V
Sbjct: 25 FEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMR-ENKN-PNIV 80
Query: 488 GYCDE---GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------VHR 537
Y D G ++ E++A G+L ++ D R ++A + +HR
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+KS NILL K+ DFG E S +T+ GTP ++ PE K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 598 DVYNFGVVLLEII 610
D+++ G++ +E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY + +A+K+L S + Q + E+E+ + H N+ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 487 VGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIEA 532
Y + L+ EF G L A + E AD L + E
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY------CHER 134
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+L+ K + KIADFG S P + + GT YL PE
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGKT 189
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE-----RTHERI 623
EK D++ GV+ E + + TH RI
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 29/258 (11%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG V+ G + T+ VA+K++ + + Q E+ +L + +T G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA-------AKVHRDVKSTN 543
+ T +I E++ G+ LL D LR ++ K+HRD+K+ N
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN 134
Query: 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVT-TTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
+LLS + K+ADFG++ + T + GTP ++ PE + K+D+++
Sbjct: 135 VLLSEHGEVKLADFGVAGQL----TDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 603 GVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIA 662
G+ +E+ E H +H + V F++ K + ++ + N E
Sbjct: 191 GITAIELARG----EPPHSELHPMK-VLFLIPKNNPPTL---------EGNYSKPLKEFV 236
Query: 663 MACVSQTSTKRPTMNQVV 680
AC+++ + RPT +++
Sbjct: 237 EACLNKEPSFRPTAKELL 254
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY + +A+K+L S + Q + E+E+ + H N+ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 487 VGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIEA 532
Y + L+ EF G L A + E AD L + E
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY------CHER 133
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+L+ K + KIADFG S P + + GT YL PE
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGKT 188
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE-----RTHERI 623
EK D++ GV+ E + + TH RI
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
GS E NQ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GSGEAPNQ-----ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 55
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHK 113
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFGL++ E
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 174 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 432 RVLGNGGFGTV----YHGYLDGT--EVAVKMLS----PSSAQGYKQFQAEVELLMRIHHK 481
R LG G FG V Y DGT VAVK L P G+KQ E+++L ++H+
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHE 93
Query: 482 NLTTLVGYCDEG--TNRGLIYEFMANGNL------------QALLLGEEADILSWEGRLR 527
++ G C++ + L+ E++ G+L Q LL ++ EG
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI----CEGMAY 149
Query: 528 IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPE 586
+ + +HRD+ + N+LL KI DFGL++ P EG + +P + PE
Sbjct: 150 LHAQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEXYRVREDGDSPVFWYAPE 207
Query: 587 YYISNRLTEKSDVYNFGVVLLEIIT 611
+ SDV++FGV L E++T
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 432 RVLGNGGFG-----TVYH--GYLDGTEVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
+ LG G FG T +H G T VAVKML +S + +E +L +++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------------- 516
L G C + LI E+ G+L+ L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 517 -ADILSWEGRLRIAI----EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571
D++S+ ++ + E + VHRD+ + NIL++ + KI+DFGLSR E S
Sbjct: 149 MGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--X 206
Query: 572 VTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
V + P ++ E + T +SDV++FGV+L EI+T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG+G FG VY G A K++ S + + + E+E+L H + L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA----IEAAK-------VHRDVK 540
++ EF G + A++L E D E ++++ +EA +HRD+K
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE----- 595
+ N+L++ + ++ADFG+S + GTP ++ PE + + +
Sbjct: 137 AGNVLMTLEGDIRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 596 KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644
K+D+++ G+ L+E+ + IE H ++ + V + K D +++ P
Sbjct: 194 KADIWSLGITLIEM----AQIEPPHHELNPMR-VLLKIAKSDPPTLLTP 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 35/216 (16%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHHKNLTTL 486
R LG G FG VY + +A+K+L S + Q + E+E+ + H N+ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 487 VGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIEA 532
Y + L+ EF G L A + E AD L + E
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY------CHER 133
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K N+L+ K + KIADFG S P + + GT YL PE
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAP-----SLRRRXMCGTLDYLPPEMIEGKT 188
Query: 593 LTEKSDVYNFGVVLLEIITSKSVIE-----RTHERI 623
EK D++ GV+ E + + TH RI
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 44/300 (14%)
Query: 408 NGSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KM 456
GS E NQ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 23 QGSGEAPNQ-----ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL 77
Query: 457 LSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE 516
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 78 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REH 135
Query: 517 ADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVE 566
D + + L ++ AK VHRD+ + N+L+ KI DFGL++ E
Sbjct: 136 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 195
Query: 567 GSGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHI 625
H P ++ E + T +SDV+++GV + E++T S + ++ I
Sbjct: 196 EKEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS---KPYDGIPA 250
Query: 626 TQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNE 685
++ +S +L KG E + P + I + C + RP ++++E ++
Sbjct: 251 SE-ISSILEKG--ERLPQPPI-------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 300
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLV 487
+LG G F VY G EVA+KM+ + A ++ Q EV++ ++ H ++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR---------LRIAIEAAKVHRD 538
Y ++ L+ E NG + L E R + +HRD
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRD 137
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+ +N+LL+ KIADFGL+ + + T+ GTP Y+ PE + +SD
Sbjct: 138 LTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY---TLCGTPNYISPEIATRSAHGLESD 194
Query: 599 VYNFGVVLLEIITSK 613
V++ G + ++ +
Sbjct: 195 VWSLGCMFYTLLIGR 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 434 LGNGGFGTVYHGYL----DGTEVAVKMLSPSSAQG-YKQFQAEVELLMRIHHKNLTTLVG 488
LG G FG+V G +VA+K+L + + ++ E +++ ++ + + L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADI-LSWEGRLRIAI--------EAAKVHRDV 539
C + L+ E G L L+G+ +I +S L + E VHRD+
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT--PGYLDPEYYISNRLTEKS 597
+ N+LL + AKI+DFGLS+ + S + T AG + PE + + +S
Sbjct: 137 AARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECINFRKFSSRS 194
Query: 598 DVYNFGVVLLEIIT 611
DV+++GV + E ++
Sbjct: 195 DVWSYGVTMWEALS 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG+G FG VY G A K++ S + + + E+E+L H + L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA----IEAAK-------VHRDVK 540
++ EF G + A++L E D E ++++ +EA +HRD+K
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE----- 595
+ N+L++ + ++ADFG+S + GTP ++ PE + + +
Sbjct: 145 AGNVLMTLEGDIRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 596 KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644
K+D+++ G+ L+E+ + IE H ++ + V + K D +++ P
Sbjct: 202 KADIWSLGITLIEM----AQIEPPHHELNPMR-VLLKIAKSDPPTLLTP 245
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
GS E NQ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GSGEAPNQ-----ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 55
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHK 113
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFGL++ E
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 174 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 43/221 (19%)
Query: 432 RVLGNGGFG-----TVYH--GYLDGTEVAVKMLSP-SSAQGYKQFQAEVELLMRIHHKNL 483
+ LG G FG T +H G T VAVKML +S + +E +L +++H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 484 TTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------------------------- 516
L G C + LI E+ G+L+ L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 517 -ADILSWEGRLRIAI----EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571
D++S+ ++ + E VHRD+ + NIL++ + KI+DFGLSR E S
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--X 206
Query: 572 VTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
V + P ++ E + T +SDV++FGV+L EI+T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQG--YKQFQAEVELLMRIH 479
F LG FG VY G+L G VA+K L A+G ++F+ E L R+
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 87
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG--------------------EEADI 519
H N+ L+G + +I+ + ++G+L L+ E D
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 520 LSWEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575
+ ++ +E VH+D+ + N+L+ K KI+D GL R V + +
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE--VYAADYYKLLG 205
Query: 576 IAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ P ++ PE + + + SD++++GVVL E+ +
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 34/205 (16%)
Query: 432 RVLGNGGFGTV----YHGYLDGT--EVAVKMLS----PSSAQGYKQFQAEVELLMRIHHK 481
R LG G FG V Y DGT VAVK L P G+KQ E+++L ++H+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHE 76
Query: 482 NLTTLVGYCDEGTNRGL--IYEFMANGNL------------QALLLGEEADILSWEGRLR 527
++ G C++ + L + E++ G+L Q LL ++ EG
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI----CEGMAY 132
Query: 528 IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPE 586
+ + +HR++ + N+LL KI DFGL++ P EG + +P + PE
Sbjct: 133 LHAQHY-IHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPE 190
Query: 587 YYISNRLTEKSDVYNFGVVLLEIIT 611
+ SDV++FGV L E++T
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 9 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQ 126
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 184
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
G+ +++ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GAMGIRSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 60
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHK 118
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFGL++ E
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 179 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 12 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 129
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 187
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 9 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 126
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 184
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 125
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 183
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 32/211 (15%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGY---KQFQAEVELLMRIHH 480
++FE R LG G FG VY + VA+K+L S + Q + E+E+ +HH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRL 526
N+ L Y + LI E+ G L A ++ E AD L +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
++ +HRD+K N+LL K + KIADFG S P + T+ GT YL PE
Sbjct: 143 KV------IHRDIKPENLLLGLKGELKIADFGWSVHAP-----SLRRKTMCGTLDYLPPE 191
Query: 587 YYISNRLTEKSDVYNFGVVLLEIITSKSVIE 617
EK D++ GV+ E++ E
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 128
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 186
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSSAQG--YKQFQAEVELLMRIH 479
F LG FG VY G+L G VA+K L A+G ++F+ E L R+
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 70
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG--------------------EEADI 519
H N+ L+G + +I+ + ++G+L L+ E D
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 520 LSWEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575
+ ++ +E VH+D+ + N+L+ K KI+D GL R V + +
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE--VYAADYYKLLG 188
Query: 576 IAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ P ++ PE + + + SD++++GVVL E+ +
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ-GYKQFQAEVELLMRIHHKNLTT- 485
+ V+G+G V Y +VA+K ++ Q + E++ + + HH N+ +
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 486 ------------LVGYCDEGTNRGLIYEFMANGNLQALLLGEE--ADILS--WEGRLRIA 529
++ G+ +I +A G ++ +L E A IL EG L
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG-LEYL 137
Query: 530 IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH--VTTTIAGTPGYLDPEY 587
+ ++HRDVK+ NILL +IADFG+S G T V T GTP ++ PE
Sbjct: 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 588 YISNRLTE-KSDVYNFGVVLLEIITSKS 614
R + K+D+++FG+ +E+ T +
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAA 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQ 125
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 183
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 432 RVLGNGGFGTV----YHGYLDGT--EVAVKMLS----PSSAQGYKQFQAEVELLMRIHHK 481
R LG G FG V Y DGT VAVK L P G+KQ E+++L ++H+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHE 76
Query: 482 NLTTLVGYCDEGTNRGL--IYEFMANGNLQALLLGEE---ADILSWEGRLRIAIEAAK-- 534
++ G C++ + L + E++ G+L+ L A +L + ++ +
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPEYYISN 591
+HR++ + N+LL KI DFGL++ P EG + +P + PE
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ SDV++FGV L E++T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGY-KQFQAEVELLMRIHHKNLTTLVGY 489
+G+G G V + + G VAVK LS P Q + K+ E+ LL ++HKN+ +L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 490 ------CDEGTNRGLIYEFMANGNLQALLLGEEADILSWE-GRLRIAIE----AAKVHRD 538
+E + L+ E M Q + + + + +S+ ++ I+ A +HRD
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 149
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K +NI++ KI DFGL+RT S + T T Y PE + E D
Sbjct: 150 LKPSNIVVKSDCTLKILDFGLART----ASTNFMMTPYVVTRYYRAPEVILGMGYKENVD 205
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQW 628
+++ G ++ E++ + + T HI QW
Sbjct: 206 IWSVGCIMGELVKGSVIFQGTD---HIDQW 232
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 18 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 135
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 193
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 73 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 189 ASDVWMFGVCMWEIL 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ-GYKQFQAEVELLMRIHHKNLTT- 485
+ V+G+G V Y +VA+K ++ Q + E++ + + HH N+ +
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 486 ------------LVGYCDEGTNRGLIYEFMANGNLQALLLGEE--ADILS--WEGRLRIA 529
++ G+ +I +A G ++ +L E A IL EG L
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG-LEYL 132
Query: 530 IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH--VTTTIAGTPGYLDPEY 587
+ ++HRDVK+ NILL +IADFG+S G T V T GTP ++ PE
Sbjct: 133 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 588 YISNRLTE-KSDVYNFGVVLLEIITSKS 614
R + K+D+++FG+ +E+ T +
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAA 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 42 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDE 101
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 102 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 159
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 160 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 217
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 2 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 119
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 177
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAVK++ + ++ ++ EV ++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------------- 534
+ L+ E+ A+G GE D L GR++ AK
Sbjct: 80 EVIETEKTLYLVMEY-ASG-------GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K+ N+LL KIADFG S F T G+P Y PE +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGK 187
Query: 592 RLT-EKSDVYNFGVVLLEIIT 611
+ + DV++ GV+L +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVS 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 125
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 183
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAVK++ + ++ ++ EV ++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------------- 534
+ L+ E+ A+G GE D L GR++ AK
Sbjct: 80 EVIETEKTLYLVMEY-ASG-------GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K+ N+LL KIADFG S F T G+P Y PE +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGK 187
Query: 592 RLT-EKSDVYNFGVVLLEIIT 611
+ + DV++ GV+L +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVS 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 104 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 162
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 220 ASDVWMFGVCMWEIL 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 128
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 186
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 85/208 (40%), Gaps = 34/208 (16%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
V G FG V+ L VAVK+ Q + Q + EV L + H+N+ +G
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSW-QNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 493 GT----NRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------------- 534
GT + LI F G+L L +A+++SW IA A+
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 535 ------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
HRD+KS N+LL A IADFGL+ F G T GT Y+ PE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA-GKSAGDTHGQVGTRRYMAPEVL 205
Query: 589 -----ISNRLTEKSDVYNFGVVLLEIIT 611
+ D+Y G+VL E+ +
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+ H+N+ +G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI---IGIN 89
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 128
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 186
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 14 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 131
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 189
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 11 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 128
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 186
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 78 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 136
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 194 ASDVWMFGVCMWEIL 208
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 26/200 (13%)
Query: 432 RVLGNGGFGTVYHG-YLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRI---HHKN 482
+VLG+G FGTV+ G ++ E V +K++ S G + FQA + ++ I H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 94
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWEGRLRIAI----EA 532
+ L+G C G++ L+ +++ G+L LG + +L+W ++ + E
Sbjct: 95 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQL-LLNWGVQIAKGMYYLEEH 152
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISN 591
VHR++ + N+LL Q ++ADFG++ P + + + A TP ++ E
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK--QLLYSEAKTPIKWMALESIHFG 210
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+ T +SDV+++GV + E++T
Sbjct: 211 KYTHQSDVWSYGVTVWELMT 230
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 430 FERVLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
FE++ G G GTVY G EVA++ ++ Q K+ L+MR +KN +V
Sbjct: 26 FEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMR-ENKN-PNIV 81
Query: 488 GYCDE---GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------VHR 537
Y D G ++ E++A G+L ++ D R ++A + +HR
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+KS NILL K+ DFG E S + + GTP ++ PE K
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 598 DVYNFGVVLLEII 610
D+++ G++ +E+I
Sbjct: 199 DIWSLGIMAIEMI 211
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 456 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 125
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 183
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 79 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 137
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 195 ASDVWMFGVCMWEIL 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 430 FERVLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
FE++ G G GTVY G EVA++ ++ Q K+ L+MR +KN +V
Sbjct: 25 FEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMR-ENKN-PNIV 80
Query: 488 GYCDE---GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------VHR 537
Y D G ++ E++A G+L ++ D R ++A + +HR
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+KS NILL K+ DFG E S + + GTP ++ PE K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 598 DVYNFGVVLLEII 610
D+++ G++ +E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 434 LGNGGFGTVYH--GYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V L G E A +++ SA+ +++ + E + + H N+ L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAI----EAAKVHRDVKS 541
E + LI++ + G L ++ E AD ++ A+ + VHR++K
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKP 138
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ VEG AGTPGYL PE + + D
Sbjct: 139 ENLLLASKLKGAAVKLADFGLA--IEVEGE-QQAWFGFAGTPGYLSPEVLRKDPYGKPVD 195
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 196 LWACGVIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+L+S K+ DFGLSR +E S + ++ PE R T
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGKLPIKWMAPESINFRRFTSA 192
Query: 597 SDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 193 SDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 81 LIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 139
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 197 ASDVWMFGVCMWEIL 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 430 FERVLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
FE++ G G GTVY G EVA++ ++ Q K+ L+MR +KN +V
Sbjct: 25 FEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMR-ENKN-PNIV 80
Query: 488 GYCDE---GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------VHR 537
Y D G ++ E++A G+L ++ D R ++A + +HR
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+KS NILL K+ DFG E S + + GTP ++ PE K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 598 DVYNFGVVLLEII 610
D+++ G++ +E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 22/159 (13%)
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGL--IYEFMANGNLQALLLG--EEADILSWEGR 525
+EV LL + H N+ + TN L + E+ G+L +++ +E L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 526 LRIAIE---AAK------------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570
LR+ + A K +HRD+K N+ L GK K+ DFGL+R T
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDT 170
Query: 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEI 609
T GTP Y+ PE EKSD+++ G +L E+
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 430 FERVLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
FE++ G G GTVY G EVA++ ++ Q K+ L+MR +KN +V
Sbjct: 26 FEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMR-ENKN-PNIV 81
Query: 488 GYCDE---GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------VHR 537
Y D G ++ E++A G+L ++ D R ++A + +HR
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
++KS NILL K+ DFG E S +T+ GTP ++ PE K
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 598 DVYNFGVVLLEII 610
D+++ G++ +E+I
Sbjct: 199 DIWSLGIMAIEMI 211
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 412 ELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYL----DGTEVAVKMLSPSSAQG-YK 466
ELK+++ + + E LG G FG+V G +VA+K+L + + +
Sbjct: 324 ELKDKKLFLKRDNLLIADIE--LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE 381
Query: 467 QFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADI-LSWEGR 525
+ E +++ ++ + + L+G C + L+ E G L L+G+ +I +S
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 440
Query: 526 LRIAI--------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
L + E VHR++ + N+LL + AKI+DFGLS+ + S + T A
Sbjct: 441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSA 498
Query: 578 GT--PGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
G + PE + + +SDV+++GV + E ++
Sbjct: 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R +G G FG V+ G E VA+K ++ ++ F E + + H ++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI---EAAK-VH 536
L+G E +I E G L++ L + A ++ + +L A+ E+ + VH
Sbjct: 456 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRLTE 595
RD+ + N+L+S K+ DFGLSR T+ + P ++ PE R T
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYME---DSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 596 KSDVYNFGVVLLEII 610
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 426 ITNNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRI 478
+++ ++RV LG+G +G V L G E A+K++ SS A EV +L ++
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 479 HHKNLTTLVGYCDEGTNRGLIYEFMANGNL-QALLLGEEADILSWEGRLRIAIEAAK--- 534
H N+ L + ++ N L+ E G L ++L ++ + ++ +
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 535 ----VHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
VHRD+K N+LL K + KI DFGLS F V G GT Y+ PE
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK----MKERLGTAYYIAPE- 193
Query: 588 YISNRLTEKSDVYNFGVVL 606
+ + EK DV++ GV+L
Sbjct: 194 VLRKKYDEKCDVWSCGVIL 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 432 RVLGNGGFGTV----YHGYLDGT--EVAVKMLSPSSA-QGYKQFQAEVELLMRIHHKNLT 484
R LG G FG V Y DGT VAVK L Q +Q E+E+L ++H+++
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 485 TLVGYCDEGTNRG--LIYEFMANGNL------------QALLLGEEADILSWEGRLRIAI 530
G C++ + L+ E++ G+L Q LL ++ EG +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI----CEGMAYLHA 130
Query: 531 EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPEYYI 589
+ +HR + + N+LL KI DFGL++ P EG + +P + PE
Sbjct: 131 QHY-IHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLK 188
Query: 590 SNRLTEKSDVYNFGVVLLEIIT 611
+ SDV++FGV L E++T
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 432 RVLGNGGFGTVYH-----GYLDGTEVAVKMLSPS----SAQGYKQFQAEVELLMRIHHKN 482
RVLG GG+G V+ G G A+K+L + +A+ +AE +L + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAI----EAAK 534
+ L+ G LI E+++ G L L E E + + +A+ +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K NI+L+ + K+ DFGL + +G+ TH T GT Y+ PE + +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH---TFCGTIEYMAPEILMRSGHN 199
Query: 595 EKSDVYNFGVVLLEIITS 612
D ++ G ++ +++T
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
GS E NQ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GSGEAPNQ-----ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 55
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHK 113
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFG ++ E
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 174 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
GS E NQ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GSGEAPNQ-----ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 55
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHK 113
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFG ++ E
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 174 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 432 RVLGNGGFGTV----YHGYLDGT--EVAVKMLSPSSA-QGYKQFQAEVELLMRIHHKNLT 484
R LG G FG V Y DGT VAVK L Q +Q E+E+L ++H+++
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 485 TLVGYCDEGTNRG--LIYEFMANGNL------------QALLLGEEADILSWEGRLRIAI 530
G C++ + L+ E++ G+L Q LL ++ EG +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI----CEGMAYLHA 129
Query: 531 EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY-LDPEYYI 589
+ +HR + + N+LL KI DFGL++ P EG + +P + PE
Sbjct: 130 QHY-IHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLK 187
Query: 590 SNRLTEKSDVYNFGVVLLEIIT 611
+ SDV++FGV L E++T
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 432 RVLGNGGFGTVYHGYL----DGTEVAVKMLSPSSAQGYKQFQAEVELLMRI---HHKNLT 484
+VLG+G FGTV+ G + ++ V + G + FQA + ++ I H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 485 TLVGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWEGRLRIAI----EAAK 534
L+G C G++ L+ +++ G+L LG + +L+W ++ + E
Sbjct: 79 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQL-LLNWGVQIAKGMYYLEEHGM 136
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
VHR++ + N+LL Q ++ADFG++ P + + + A TP ++ E +
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK--QLLYSEAKTPIKWMALESIHFGKY 194
Query: 594 TEKSDVYNFGVVLLEIIT 611
T +SDV+++GV + E++T
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G V Y ++ VA+K +SP Q Y Q E+++L+ H+N+ +G
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI---IGIN 89
Query: 491 D-------EGTNRGLIYEFMANGNLQALLLGEEAD-------ILSWEGRLRIAIEAAKVH 536
D E I + + +L LL + + L+ A +H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K +N+LL+ KI DFGL+R + T T T Y PE ++++ K
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 597 S-DVYNFGVVLLEIITSKSVIERTH 620
S D+++ G +L E+++++ + H
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 426 ITNNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRI 478
+++ ++RV LG+G +G V L G E A+K++ SS A EV +L ++
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 479 HHKNLTTLVGYCDEGTNRGLIYEFMANGNL-QALLLGEEADILSWEGRLRIAIEAAK--- 534
H N+ L + ++ N L+ E G L ++L ++ + ++ +
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 535 ----VHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
VHRD+K N+LL K + KI DFGLS F V G GT Y+ PE
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK----MKERLGTAYYIAPE- 176
Query: 588 YISNRLTEKSDVYNFGVVL 606
+ + EK DV++ GV+L
Sbjct: 177 VLRKKYDEKCDVWSCGVIL 195
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAV+++ + ++ ++ EV ++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------------- 534
+ L+ E+ A+G GE D L GR++ AK
Sbjct: 80 EVIETEKTLYLVMEY-ASG-------GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K+ N+LL KIADFG S F T G+P Y PE +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGK 187
Query: 592 RLT-EKSDVYNFGVVLLEIIT 611
+ + DV++ GV+L +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVS 208
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
GS E NQ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GSGEAPNQ-----ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 55
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 56 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHK 113
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFG ++ E
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 174 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 430 FERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQ-GYKQFQAEVELLMRIHHKNLTTL 486
F+R LG+G FG V+ G E +K ++ +Q +Q +AE+E+L + H N+ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 487 VGYCDEGTNRGLIYEFMANGNL-----------QALLLGEEADILS-WEGRLRIAIEAAK 534
++ N ++ E G L +AL G A+++ L
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 535 VHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VH+D+K NIL S KI DFGL+ F S H +T AGT Y+ PE + +
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFK---SDEH-STNAAGTALYMAPEVFKRD 201
Query: 592 RLTEKSDVYNFGVVLLEIIT 611
+T K D+++ GVV+ ++T
Sbjct: 202 -VTFKCDIWSAGVVMYFLLT 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA+K++S A +
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 178
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 210
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 434 LGNGGFGTVY--HGYLDGTEVAVKML---SPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GG TVY + +VA+K + + K+F+ EV ++ H+N+ +++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 489 YCDEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGRLRIAIEAAK----VHRDV 539
+E L+ E++ L + L + I ++ ++ I+ A VHRD+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI-NFTNQILDGIKHAHDMRIVHRDI 137
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K NIL+ KI DFG+++ E S T T + GT Y PE E +D+
Sbjct: 138 KPQNILIDSNKTLKIFDFGIAKALS-ETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDI 195
Query: 600 YNFGVVLLEIITSK 613
Y+ G+VL E++ +
Sbjct: 196 YSIGIVLYEMLVGE 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA+K++S A +
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 178
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA+K++S A +
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 178
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 210
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
G+ +++ +LRI E +VL +G FGTVY G +G +V + ++
Sbjct: 1 GAMGIRSGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR 60
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHK 118
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFGL++ E
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 179 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA+K++S A +
Sbjct: 3 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 62
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 177
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHHKNLTTL 486
R LG G FG V+ +G A+K+L KQ + E +L + H + +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEE------ADILSWEGRLRIAIEAAK--VHRD 538
G + +I +++ G L +LL + A + E L + +K ++RD
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 131
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K NILL KI DFG ++ P VT + GTP Y+ PE + + D
Sbjct: 132 LKPENILLDKNGHIKITDFGFAKYVP------DVTYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 599 VYNFGVVLLEIITS-----KSVIERTHERI 623
++FG+++ E++ S +T+E+I
Sbjct: 186 WWSFGILIYEMLAGYTPFYDSNTMKTYEKI 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA+K++S A +
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 184
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAVK++ + ++ ++ EV ++ ++H N+ L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSW------EGRLRIAIEAAK------- 534
+ L+ E+ + G + L+ W + R + A +
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K+ N+LL KIADFG S F T G+P Y PE + +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYD 183
Query: 595 -EKSDVYNFGVVLLEIITS 612
+ DV++ GV+L +++
Sbjct: 184 GPEVDVWSLGVILYTLVSG 202
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 12 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 129
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFG ++ E H P
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPI 187
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEV----AVKML-SPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V A+K L +S + K+ E
Sbjct: 5 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 64
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 65 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 122
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
A+ VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 180
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
G+ +++ +LRI E +VL +G FGTVY G +G +V + ++
Sbjct: 1 GAMGIRSGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELR 60
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHK 118
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFGL++ E
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 179 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 119/294 (40%), Gaps = 50/294 (17%)
Query: 412 ELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTEVAV-------KMLSPSSAQG 464
EL+ + SN R F+ +G G F TVY G T V V + L+ S Q
Sbjct: 13 ELETKAVGXSNDGRFLK-FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ- 70
Query: 465 YKQFQAEVELLMRIHHKNLTTLVGYCD--EGTNRG-----LIYEFMANGNLQALL----L 513
+F+ E E L + H N+ V + D E T +G L+ E +G L+ L +
Sbjct: 71 --RFKEEAEXLKGLQHPNI---VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV 125
Query: 514 GEEADILSWEGRLRIAIEAAK------VHRDVKSTNILLSGKF-QAKIADFGLSRTFPVE 566
+ + SW ++ ++ +HRD+K NI ++G KI D GL+
Sbjct: 126 XKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---- 181
Query: 567 GSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHIT 626
+ GTP + PE Y + E DVY FG LE TS+ I
Sbjct: 182 -KRASFAKAVIGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY 239
Query: 627 QWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVV 680
+ V+ S V P FD ++ + EI C+ Q +R ++ ++
Sbjct: 240 RRVT---------SGVKP---ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 409 GSFELKNQRFSYSNVLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KML 457
G+ +++ +LRI E +VLG+G FGTVY G +G +V + ++
Sbjct: 1 GAMGIRSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 60
Query: 458 SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA 517
+S + K+ E ++ + + ++ L+G C T + LI + M G L + E
Sbjct: 61 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHK 118
Query: 518 DILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567
D + + L ++ AK VHRD+ + N+L+ KI DFG ++ E
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
Query: 568 SGTHVTTTIAGTP-GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
H P ++ E + T +SDV+++GV + E++T
Sbjct: 179 KEYHAEG--GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 430 FERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTL 486
F+ LG G F V G AVK + + +G + + E+ +L +I H+N+ L
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 487 VGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIEA 532
+ + L+ + ++ G L + L+ + D + + R+ I
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI---- 141
Query: 533 AKVHRDVKSTNILLSGKFQAK---IADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI 589
VHRD+K N+L + + I+DFGLS+ +EG G V +T GTPGY+ PE
Sbjct: 142 --VHRDLKPENLLYYSQDEESKIMISDFGLSK---MEGKGD-VMSTACGTPGYVAPEVLA 195
Query: 590 SNRLTEKSDVYNFGVV 605
++ D ++ GV+
Sbjct: 196 QKPYSKAVDCWSIGVI 211
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAVK++ + ++ ++ EV ++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------------- 534
+ L+ E+ A+G GE D L GR++ AK
Sbjct: 80 EVIETEKTLYLVMEY-ASG-------GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K+ N+LL KIADFG S F + + G P Y PE +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELFQGK 187
Query: 592 RLT-EKSDVYNFGVVLLEIITS 612
+ + DV++ GV+L +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGL--IYEFMANGNLQALLLG--EEADILSWEGR 525
+EV LL + H N+ + TN L + E+ G+L +++ +E L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 526 LRIAIE---AAK------------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570
LR+ + A K +HRD+K N+ L GK K+ DFGL+R T
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDT 170
Query: 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEI 609
GTP Y+ PE EKSD+++ G +L E+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VLG+G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 8 LLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 125
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFG ++ E H P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--GKVPI 183
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 423 VLRITNNFE----RVLGNGGFGTVYHGYL--DGTEVAV-----KMLSPSSAQGYKQFQAE 471
+LRI E +VL +G FGTVY G +G +V + ++ +S + K+ E
Sbjct: 8 LLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
++ + + ++ L+G C T + LI + M G L + E D + + L ++
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQ 125
Query: 532 AAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP- 580
AK VHRD+ + N+L+ KI DFGL++ E H P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--GKVPI 183
Query: 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
++ E + T +SDV+++GV + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGY-LDGTEVAVKMLS--------PSSAQGYKQFQA 470
+ ++ E+V G G +G VY G VA+K + PS+A
Sbjct: 16 FQGLMEKYQKLEKV-GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI------R 68
Query: 471 EVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAI 530
E+ LL +HH N+ +L+ L++EFM +L+ +L +E + +++I +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYL 125
Query: 531 -----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIA 577
+ +HRD+K N+L++ K+ADFGL+R F PV S TH T+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTL- 183
Query: 578 GTPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSV 615
Y P+ + S + + D+++ G + E+IT K +
Sbjct: 184 ---WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGY-LDGTEVAVKMLS--------PSSAQGYKQFQA 470
+ ++ E+V G G +G VY G VA+K + PS+A
Sbjct: 16 FQGLMEKYQKLEKV-GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI------R 68
Query: 471 EVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAI 530
E+ LL +HH N+ +L+ L++EFM +L+ +L +E + +++I +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYL 125
Query: 531 -----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIA 577
+ +HRD+K N+L++ K+ADFGL+R F PV S TH T+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTL- 183
Query: 578 GTPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSV 615
Y P+ + S + + D+++ G + E+IT K +
Sbjct: 184 ---WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 432 RVLGNGGFGTVYH-----GYLDGTEVAVKMLSPS----SAQGYKQFQAEVELLMRIHHKN 482
RVLG GG+G V+ G G A+K+L + +A+ +AE +L + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAI----EAAK 534
+ L+ G LI E+++ G L L E E + + +A+ +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K NI+L+ + K+ DFGL + +G+ TH GT Y+ PE + +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH---XFCGTIEYMAPEILMRSGHN 199
Query: 595 EKSDVYNFGVVLLEIITS 612
D ++ G ++ +++T
Sbjct: 200 RAVDWWSLGALMYDMLTG 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 434 LGNGGFGTVYHG--YLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G G F V G E A K+++ SA+ +++ + E + + H N+ L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAI----EAAKVHRDVKS 541
E L+++ + G L ++ E AD ++ A+ + VHRD+K
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 131
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ V+G AGTPGYL PE + D
Sbjct: 132 ENLLLASKCKGAAVKLADFGLA--IEVQGD-QQAWFGFAGTPGYLSPEVLRKEAYGKPVD 188
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 189 IWACGVIL 196
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 434 LGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYK---QFQAEVELLMRIHHKNLTTLVG 488
LG G FG V G L G +VAVK+L+ + + + E++ L H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAIEAAK----VHRDVK 540
T+ ++ E+++ G L + EE + ++ A++ VHRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE--KSD 598
N+LL AKIADFGLS S T G+P Y PE IS RL + D
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMM----SDGEFLRTSCGSPNYAAPE-VISGRLYAGPEVD 193
Query: 599 VYNFGVVLLEIITS 612
+++ GV+L ++
Sbjct: 194 IWSCGVILYALLCG 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA++++S A +
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 303
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 335
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 28/201 (13%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGY 489
++GNG +G VY G G A+K++ + + ++ + E+ +L + HH+N+ T G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 490 CDEGTNRG------LIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------- 534
+ G L+ EF G++ L+ + + L E I E +
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 535 -VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K N+LL+ + K+ DFG+S T GTP ++ PE +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 594 TE-----KSDVYNFGVVLLEI 609
+ KSD+++ G+ +E+
Sbjct: 207 PDATYDFKSDLWSLGITAIEM 227
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPSS--------AQGYKQFQ 469
Y LR + LG+G G V + T +VA++++S A +
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 202
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGR 525
E+E+L +++H + + + D + ++ E M G L ++G +EA + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 526 LRIAI----EAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ +A+ E +HRD+K N+LLS + + KI DFG S+ T + T+ G
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCG 317
Query: 579 TPGYLDPEYYIS------NRLTEKSDVYNFGVVLL 607
TP YL PE +S NR D ++ GV+L
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 349
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 432 RVLGNGGFGTVYHGYL-----DGTEVAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R+LG G FG VY G + VAVK K+ F +E ++ + H ++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------V 535
L+G +E +I E G L L + L + +++ K V
Sbjct: 74 LIGIIEEEPT-WIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 131
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ NIL++ K+ DFGLSR +E + + ++ PE R T
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 596 KSDVYNFGVVLLEIIT 611
SDV+ F V + EI++
Sbjct: 190 ASDVWMFAVCMWEILS 205
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGY-KQFQAEVELLMRIHHKNLTTLVGY 489
+G+G G V + + G VAVK LS P Q + K+ E+ LL ++HKN+ +L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 490 ------CDEGTNRGLIYEFMANGNLQALLLGEEADILSWE-GRLRIAIE----AAKVHRD 538
+E + L+ E M Q + + + + +S+ ++ I+ A +HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+K +NI++ KI DFGL+RT + T T Y PE + D
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLART----ACTNFMMTPYVVTRYYRAPEVILGMGYAANVD 207
Query: 599 VYNFGVVLLEIITSKSVIERTHERIHITQW 628
+++ G ++ E++ + + T HI QW
Sbjct: 208 IWSVGCIMGELVKGCVIFQGTD---HIDQW 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 33/202 (16%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAV+++ + ++ ++ EV ++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------------- 534
+ L+ E+ A+G GE D L GR++ AK
Sbjct: 80 EVIETEKTLYLVMEY-ASG-------GEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K+ N+LL KIADFG S F + + G+P Y PE +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPELFQGK 187
Query: 592 RLT-EKSDVYNFGVVLLEIITS 612
+ + DV++ GV+L +++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 432 RVLGNGGFGTVYHGYL-----DGTEVAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R+LG G FG VY G + VAVK K+ F +E ++ + H ++
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------V 535
L+G +E +I E G L L + L + +++ K V
Sbjct: 90 LIGIIEEEPT-WIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ NIL++ K+ DFGLSR +E + + ++ PE R T
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 596 KSDVYNFGVVLLEIIT 611
SDV+ F V + EI++
Sbjct: 206 ASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 432 RVLGNGGFGTVYHGYL-----DGTEVAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTT 485
R+LG G FG VY G + VAVK K+ F +E ++ + H ++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------V 535
L+G +E +I E G L L + L + +++ K V
Sbjct: 78 LIGIIEEEPT-WIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRD+ NIL++ K+ DFGLSR +E + + ++ PE R T
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 596 KSDVYNFGVVLLEIIT 611
SDV+ F V + EI++
Sbjct: 194 ASDVWMFAVCMWEILS 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+G G FG VY G + T+ VA+K++ + + Q E+ +L + +T G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 491 DEGTNRGLIYEFMANGNLQALLLG---EEADILSWEGRLRIAIE----AAKVHRDVKSTN 543
+ T +I E++ G+ LL EE I + + ++ K+HRD+K+ N
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAAN 146
Query: 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVT-TTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
+LLS + K+ADFG++ + T + GTP ++ PE + K+D+++
Sbjct: 147 VLLSEQGDVKLADFGVAGQL----TDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202
Query: 603 GVVLLEI 609
G+ +E+
Sbjct: 203 GITAIEL 209
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 434 LGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V G E A K+++ SA+ +++ + E + + H N+ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAIEAAK----VHRDVKS 541
E L+++ + G L ++ E AD ++ ++ VHRD+K
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ V+G AGTPGYL PE + + D
Sbjct: 132 ENLLLASKSKGAAVKLADFGLA--IEVQGD-QQAWFGFAGTPGYLSPEVLRKDPYGKPVD 188
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 189 MWACGVIL 196
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 433 VLGNGGFGTVY--HGYLDGTEVAVKML--SPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
++G G +G V G VA+K S K E++LL ++ H+NL L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 489 YCDEGTNRGLIYEFMANGNLQAL-LLGEEADILSWEGRLRIAIEAAK-------VHRDVK 540
C + L++EF+ + L L L D + L I +HRD+K
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN-RLTEKSDV 599
NIL+S K+ DFG +RT G V T Y PE + + + + DV
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAPELLVGDVKYGKAVDV 208
Query: 600 YNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTV 659
+ G ++ E+ + + + I Q M+ G++ PR E F+ N V+ V
Sbjct: 209 WAIGCLVTEMFMGEPLFPGDSD---IDQLYHIMMCLGNL----IPRHQELFNKNPVFAGV 261
Query: 660 EIAMACVSQTSTKR-PTMNQVVMEL 683
+ + +R P +++VV++L
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDL 286
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 412 ELKNQRFSYSNVLRITN-NFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQF 468
EL +R S L+I + ++LG G FG V+ T A+K L
Sbjct: 3 ELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL----M 58
Query: 469 QAEVELLM---RI-----HHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG------ 514
+VE M R+ H LT + N + E++ G+L +
Sbjct: 59 DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL 118
Query: 515 EEADILSWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572
A + E L + +K V+RD+K NILL KIADFG+ + G
Sbjct: 119 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE---NMLGDAK 175
Query: 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKS 614
T GTP Y+ PE + + D ++FGV+L E++ +S
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 434 LGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
LG G F V G E A K+++ SA+ +++ + E + + H N+ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 490 CDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAIEAAK----VHRDVKS 541
E L+++ + G L ++ E AD ++ ++ VHRD+K
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 542 TNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
N+LL+ K + K+ADFGL+ V+G AGTPGYL PE + + D
Sbjct: 132 ENLLLASKSKGAAVKLADFGLA--IEVQGD-QQAWFGFAGTPGYLSPEVLRKDPYGKPVD 188
Query: 599 VYNFGVVL 606
++ GV+L
Sbjct: 189 MWACGVIL 196
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 470 AEVELLMRIHHKNLTTLVGYCDEGTNRGL--IYEFMANGNLQALLLG--EEADILSWEGR 525
+EV LL + H N+ + TN L + E+ G+L +++ +E L E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 526 LRIAIE---AAK------------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570
LR+ + A K +HRD+K N+ L GK K+ DFGL+R
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDE 170
Query: 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEI 609
GTP Y+ PE EKSD+++ G +L E+
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHHKN--------- 482
LG GG G V+ + + VA+K + + Q K E++++ R+ H N
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 483 -----LTTLVGYCDEGTNRGLIYEFM----ANGNLQALLLGEEADILSWE--GRLRIAIE 531
LT VG E + ++ E+M AN Q LL E A + ++ L+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 532 AAKVHRDVKSTNILLSGK-FQAKIADFGLSRTF-PVEGSGTHVTTTIAGTPGYLDPEYYI 589
A +HRD+K N+ ++ + KI DFGL+R P H++ + T Y P +
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLL 197
Query: 590 S-NRLTEKSDVYNFGVVLLEIITSKSVIERTHE 621
S N T+ D++ G + E++T K++ HE
Sbjct: 198 SPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 28/234 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKML-SPSSAQGY-KQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G V G +VA+K L P ++ + K+ E+ LL + H+N+ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 490 ------CDEGTNRGLIYEFMANGNLQALL----LGEEA-DILSWE--GRLRIAIEAAKVH 536
D+ T+ L+ FM +L L+ LGE+ L ++ LR A +H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 151
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTE 595
RD+K N+ ++ + KI DFGL+R E G VT Y PE ++ R T+
Sbjct: 152 RDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR------WYRAPEVILNWMRYTQ 205
Query: 596 KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649
D+++ G ++ E+IT K++ + + H+ Q M G + RL D
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKGSD---HLDQLKEIMKVTGTPPAEFVQRLQSD 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEV----AVKMLSPSSAQGYKQFQAEVE--LLMRIHHKNLT 484
+VLG G FG V+ + G++ A+K+L ++ + + + ++E +L+ ++H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 485 TL-VGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAIEAAK----V 535
L + EG LI +F+ G+L L E E D+ + L +A++ +
Sbjct: 90 KLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT--TIAGTPGYLDPEYYISNRL 593
+RD+K NILL + K+ DFGLS+ S H + GT Y+ PE
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKE-----SIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 594 TEKSDVYNFGVVLLEIIT 611
T+ +D ++FGV++ E++T
Sbjct: 204 TQSADWWSFGVLMFEMLT 221
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 434 LGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYK---QFQAEVELLMRIHHKNLTTLVG 488
LG G FG V G L G +VAVK+L+ + + + E++ L H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAIEAAK----VHRDVK 540
T+ ++ E+++ G L + EE + ++ A++ VHRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE--KSD 598
N+LL AKIADFGLS S G+P Y PE IS RL + D
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMM----SDGEFLRDSCGSPNYAAPE-VISGRLYAGPEVD 193
Query: 599 VYNFGVVLLEIITS 612
+++ GV+L ++
Sbjct: 194 IWSCGVILYALLCG 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 412 ELKNQRFSYSNVLRITNN-FERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQF 468
EL +R S L+I + ++LG G FG V+ T A+K L
Sbjct: 2 ELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL----M 57
Query: 469 QAEVELLM---RI-----HHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG------ 514
+VE M R+ H LT + N + E++ G+L +
Sbjct: 58 DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDL 117
Query: 515 EEADILSWEGRLRIAIEAAK--VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572
A + E L + +K V+RD+K NILL KIADFG+ + G
Sbjct: 118 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE---NMLGDAK 174
Query: 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKS 614
T GTP Y+ PE + + D ++FGV+L E++ +S
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 6 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 60
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 120
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 176
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 50 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 104
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 105 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 164
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 220
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 272
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 12 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 66
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 126
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 11 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 65
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 66 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 125
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 126 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 181
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 6 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 60
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 120
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 176
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 228
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 50 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 104
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 105 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 164
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 220
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 272
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 13 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 67
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 68 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 127
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 183
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 235
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 13 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 67
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 68 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 127
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 183
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 235
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 5 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 59
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 60 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 119
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 120 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 175
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEV----AVKMLSPSSAQGYKQFQAEVE--LLMRIHHKNLT 484
+VLG G FG V+ + G++ A+K+L ++ + + + ++E +L+ ++H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 485 TL-VGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAIEAAK----V 535
L + EG LI +F+ G+L L E E D+ + L +A++ +
Sbjct: 90 KLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT--TIAGTPGYLDPEYYISNRL 593
+RD+K NILL + K+ DFGLS+ S H + GT Y+ PE
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKE-----SIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 594 TEKSDVYNFGVVLLEIITS 612
T+ +D ++FGV++ E++T
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 12 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 66
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE 126
Query: 519 ILSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 12 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTH 66
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHE 126
Query: 519 ILSWE-----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 40/216 (18%)
Query: 428 NNF----ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK 481
NNF + LG G F V G E A K L + + +AE+ +H
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR--RRGQDCRAEI-----LHEI 79
Query: 482 NLTTLVGYCDEGTNRG----------LIYEFMANGNLQALLLGEEADILSWEGRLRIAIE 531
+ L C N LI E+ A G + +L L E A+++S +R+ +
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ 139
Query: 532 AAK----------VHRDVKSTNILLSGKF---QAKIADFGLSRTFPVEGSGTHVTTTIAG 578
+ VH D+K NILLS + KI DFG+SR G + I G
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI---GHACELRE-IMG 195
Query: 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKS 614
TP YL PE + +T +D++N G++ ++T S
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS 231
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 24/199 (12%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEV----AVKMLSPSSAQGYKQFQAEVE--LLMRIHHKNLT 484
+VLG G FG V+ + G++ A+K+L ++ + + + ++E +L+ ++H +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 485 TL-VGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAIEAAK----V 535
L + EG LI +F+ G+L L E E D+ + L +A++ +
Sbjct: 91 KLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 149
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT--TIAGTPGYLDPEYYISNRL 593
+RD+K NILL + K+ DFGLS+ S H + GT Y+ PE
Sbjct: 150 YRDLKPENILLDEEGHIKLTDFGLSKE-----SIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 594 TEKSDVYNFGVVLLEIITS 612
T+ +D ++FGV++ E++T
Sbjct: 205 TQSADWWSFGVLMFEMLTG 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 434 LGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY-KQFQAEVELLMRIHHKNLTTLVG 488
+G+G G V Y LD VA+K LS P Q + K+ E+ L+ ++HKN+ +L+
Sbjct: 32 IGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 489 Y------CDEGTNRGLIYEFMANGNLQALLLGEEADILSWE-GRLRIAIE----AAKVHR 537
+E + L+ E M Q + + + + +S+ ++ I+ A +HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K +NI++ KI DFGL+RT + + T T Y PE + E
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLART----AGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 598 DVYNFGVVLLEIITSKSVIERTHERIHITQW 628
D+++ G ++ E++ K + R +I QW
Sbjct: 207 DIWSVGCIMGEMVRHKILFP---GRDYIDQW 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ + I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMT 183
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ GV++ E+I + T HI QW
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 433 VLGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQ--FQAEVELLMRIHHKNLTTLVG 488
+LG G FG V + E AVK+++ +SA+ EVELL ++ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRD 538
++ ++ ++ E G L ++ + S RI + VHRD
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 539 VKSTNILLSGK---FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
+K NILL K KI DFGLS F T + I GT Y+ PE + E
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRI-GTAYYIAPE-VLRGTYDE 201
Query: 596 KSDVYNFGVVL 606
K DV++ GV+L
Sbjct: 202 KCDVWSAGVIL 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 421 SNVLRITN-NFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS---SAQGYKQFQAEVEL 474
SN L I N F RVLG G FG V + G AVK+L + E +
Sbjct: 17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRI 76
Query: 475 LMRIHHKNLTTLVGYCDEGTNR-GLIYEFMANGNL----QALLLGEEADILSWEGRLRIA 529
L + T + C + +R + EF+ G+L Q +EA + + A
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136
Query: 530 I----EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT-TIAGTPGYLD 584
+ + ++RD+K N+LL + K+ADFG+ + EG VTT T GTP Y+
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK----EGICNGVTTATFCGTPDYIA 192
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHE 621
PE D + GV+L E++ + E +E
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 434 LGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY-KQFQAEVELLMRIHHKNLTTLVG 488
+G+G G V Y LD VA+K LS P Q + K+ E+ L+ ++HKN+ +L+
Sbjct: 32 IGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 489 Y------CDEGTNRGLIYEFMANGNLQALLLGEEADILSWE-GRLRIAIE----AAKVHR 537
+E + L+ E M Q + + + + +S+ ++ I+ A +HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K +NI++ KI DFGL+RT + + T T Y PE + E
Sbjct: 151 DLKPSNIVVKSDXTLKILDFGLART----AGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 598 DVYNFGVVLLEIITSKSVIERTHERIHITQW 628
D+++ G ++ E++ K + R +I QW
Sbjct: 207 DIWSVGCIMGEMVRHKILFP---GRDYIDQW 234
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 432 RVLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQ---AEVELLMRIHHKNLTTL 486
R +G+G FG VY + VA+K +S S Q +++Q EV L ++ H N
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 487 VG-YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAKV---------- 535
G Y E T L+ E+ LG +D+L + +E A V
Sbjct: 81 RGCYLREHTA-WLVMEY---------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 536 -------HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
HRDVK+ NILLS K+ DFG S GTP ++ PE
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFG-------SASIMAPANXFVGTPYWMAPEVI 183
Query: 589 IS---NRLTEKSDVYNFGVVLLEIITSK 613
++ + K DV++ G+ +E+ K
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTL 486
R LG GGF Y +D EV + P S ++ E+ + + + ++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHR 537
G+ ++ ++ E +L L +A + E R +R I+ + +HR
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA-VTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+ L+ KI DFGL+ +G T+ GTP Y+ PE + +
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKTLCGTPNYIAPEVLCKKGHSFEV 223
Query: 598 DVYNFGVVLLEIITSK-----SVIERTHERIHITQW 628
D+++ G +L ++ K S ++ T+ RI ++
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 259
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ + I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMT 183
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ GV++ E+I + T HI QW
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 432 RVLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQ---AEVELLMRIHHKNLTTL 486
R +G+G FG VY + VA+K +S S Q +++Q EV L ++ H N
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 487 VG-YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAKV---------- 535
G Y E T L+ E+ LG +D+L + +E A V
Sbjct: 120 RGCYLREHTA-WLVMEY---------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 536 -------HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
HRDVK+ NILLS K+ DFG S GTP ++ PE
Sbjct: 170 LHSHNMIHRDVKAGNILLSEPGLVKLGDFG-------SASIMAPANXFVGTPYWMAPEVI 222
Query: 589 IS---NRLTEKSDVYNFGVVLLEIITSK 613
++ + K DV++ G+ +E+ K
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNL 483
NF VLG G FG V GTE A+K+L + E +L +
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 484 TTLVGYCDEGTNR-GLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAK 534
T + C + +R + E++ G+L Q + +E + + + I + +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
++RD+K N++L + KIADFG+ + ++G T GTP Y+ PE
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV---TTREFCGTPDYIAPEIIAYQPYG 198
Query: 595 EKSDVYNFGVVLLEIITSK 613
+ D + +GV+L E++ +
Sbjct: 199 KSVDWWAYGVLLYEMLAGQ 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 36/201 (17%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYK---QFQAEVELLMRIHHKNLTTLVG 488
LG G FG V G L G +VAVK+L+ + + + E++ L H ++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL------RI----------AIEA 532
++ ++ E+++ G L D + GRL R+
Sbjct: 84 VISTPSDIFMVMEYVSGGEL--------FDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
VHRD+K N+LL AKIADFGLS S G+P Y PE IS R
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRXSCGSPNYAAPE-VISGR 190
Query: 593 LTE--KSDVYNFGVVLLEIIT 611
L + D+++ GV+L ++
Sbjct: 191 LYAGPEVDIWSSGVILYALLC 211
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 432 RVLGNGGFGTVY--HGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLV 487
+ +G G F V L G EVAVK++ + ++ ++ EV + ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGE-EADILSWEGRLRIAIEAAK-------VHRDV 539
+ L+ E+ + G + L+ + R + A + VHRD+
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT-EKSD 598
K+ N+LL KIADFG S F + + G P Y PE + + + D
Sbjct: 140 KAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 599 VYNFGVVLLEIITS 612
V++ GV+L +++
Sbjct: 196 VWSLGVILYTLVSG 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 421 SNVLRITNNFE--RVLGNGGFGTVYHGYLDG--TEVAVKMLSPS--SAQGYKQFQAEVEL 474
+ R T++++ LG G F V E A K+++ SA+ +++ + E +
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 475 LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE----ADILSWEGRLRIAI 530
+ H N+ L E L+++ + G L ++ E AD ++ ++
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESV 143
Query: 531 EAAK----VHRDVKSTNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
VHRD+K N+LL+ K + K+ADFGL+ V+G AGTPGYL
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGE-QQAWFGFAGTPGYL 200
Query: 584 DPEYYISNRLTEKSDVYNFGVVL 606
PE + + D++ GV+L
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 5 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTH 59
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 60 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHE 119
Query: 519 ILSWE-----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 120 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART----AGTSFMM 175
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTV---YHGYLDGTEVAVKMLS-PSSAQGY 465
S E+ + F+ VL+ N + +G+G G V Y LD VA+K LS P Q +
Sbjct: 12 SVEVGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTH 66
Query: 466 -KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEAD 518
K+ E+ L+ ++HKN+ +L+ +E + L+ E M Q + + + +
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHE 126
Query: 519 ILSWE-----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
+S+ ++ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQW 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 433 VLGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGY--KQFQAEVELLMRIHHKNLTTLVG 488
+LG G FG V + E AVK+++ +SA+ EVELL ++ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRD 538
++ ++ ++ E G L ++ + S RI + VHRD
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 539 VKSTNILLSGK---FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
+K NILL K KI DFGLS F T + I GT Y+ PE + E
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRI-GTAYYIAPE-VLRGTYDE 201
Query: 596 KSDVYNFGVVL 606
K DV++ GV+L
Sbjct: 202 KCDVWSAGVIL 212
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 42/219 (19%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIH-HKNLTTLV 487
LG G +G V+ G VAVK + + S + F+ E+ +L + H+N+ L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 488 GYCDEGTNRG--LIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAKV---------- 535
+R L++++M +L A++ A+IL + + + KV
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVI---RANILEPVHKQYVVYQLIKVIKYLHSGGLL 131
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTF----------PVE--------GSGTHVTTTIA 577
HRD+K +NILL+ + K+ADFGLSR+F P+ + T
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 578 GTPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSV 615
T Y PE + S + T+ D+++ G +L EI+ K +
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 432 RVLGNGGFGTVYHGY--LDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+ LG G FG V Y G +VA+K+ L+ S QG + + E+ L + H ++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 67
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI------AIEAAK---- 534
L ++ E+ N ++ + D +S + R A+E
Sbjct: 68 KLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K N+LL KIADFGLS + G + T+ G+P Y PE IS +L
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSN---IMTDGNFLKTS-CGSPNYAAPE-VISGKLY 179
Query: 595 E--KSDVYNFGVVLLEIITSK 613
+ DV++ GV+L ++ +
Sbjct: 180 AGPEVDVWSCGVILYVMLCRR 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 41/209 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKML-SPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
+G G +G V+ G G +VAVK+ + A +++ + +LMR H+N+ + +
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMR--HENILGFIAADIK 102
Query: 493 GTN-------------RGLIYEFMANGNLQAL------------LLGEEADILSWEGRLR 527
GT G +Y+++ + L A L +I S +G+
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA 162
Query: 528 IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV-TTTIAGTPGYLDPE 586
IA HRD+KS NIL+ IAD GL+ F + + + T GT Y+ PE
Sbjct: 163 IA------HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 587 YYIS--NRLTEKS----DVYNFGVVLLEI 609
NR +S D+Y+FG++L E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTL---- 486
LG GGFG V G +VA+K S + +++ E++++ +++H N+ +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 487 ---------------VGYCDEGTNRGLIYEF-----MANGNLQALLLGEEADILSWEGRL 526
+ YC+ G R + +F + G ++ LL +DI S L
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL----SDISS---AL 135
Query: 527 RIAIEAAKVHRDVKSTNILLS---GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
R E +HRD+K NI+L + KI D G ++ E + T GT YL
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 191
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE + T D ++FG + E IT
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTL---- 486
LG GGFG V G +VA+K S + +++ E++++ +++H N+ +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 487 ---------------VGYCDEGTNRGLIYEF-----MANGNLQALLLGEEADILSWEGRL 526
+ YC+ G R + +F + G ++ LL +DI S L
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL----SDISS---AL 134
Query: 527 RIAIEAAKVHRDVKSTNILLS---GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
R E +HRD+K NI+L + KI D G ++ E + T GT YL
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 190
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIIT 611
PE + T D ++FG + E IT
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 24/195 (12%)
Query: 429 NFERVLGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGY--KQFQAEVELLMRIHHKNLT 484
N +LG G FG V + E AVK+++ +SA+ EVELL ++ H N+
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK---------- 534
L ++ ++ ++ E G L ++ + S RI +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNI 142
Query: 535 VHRDVKSTNILLSGK---FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K NILL K KI DFGLS F T + I GT Y+ PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRI-GTAYYIAPE-VLRG 197
Query: 592 RLTEKSDVYNFGVVL 606
EK DV++ GV+L
Sbjct: 198 TYDEKCDVWSAGVIL 212
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 56/278 (20%)
Query: 433 VLGNGGFGT-VYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
VLG+G GT VY G D +VAVK + P + + EV+LL R ++ + +C
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILP---ECFSFADREVQLL-RESDEHPNVIRYFCT 86
Query: 492 EGTNR----------GLIYEFMANGNLQAL------LLGEEADILSWEGRLRIAIEAAKV 535
E + + E++ + L LL + L+ L I V
Sbjct: 87 EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI------V 140
Query: 536 HRDVKSTNILLS-----GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY-- 588
HRD+K NIL+S GK +A I+DFGL + V + + GT G++ PE
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200
Query: 589 -ISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIH-----ITQWVSFMLGKGDIESIV 642
T D+++ G V +I+ S H + + + +LG ++ +
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGS---------HPFGKSLQRQANILLGACSLDCL- 250
Query: 643 DPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVV 680
P HED E+ ++ KRP+ V+
Sbjct: 251 HPEKHEDVIAR------ELIEKMIAMDPQKRPSAKHVL 282
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 432 RVLGNGGFGTVYHGY--LDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+ LG G FG V Y G +VA+K+ L+ S QG + + E+ L + H ++
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 71
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI------AIEAAK---- 534
L ++ E+ N ++ + D +S + R A+E
Sbjct: 72 KLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K N+LL KIADFGLS + G + T+ G+P Y PE IS +L
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSN---IMTDGNFLKTS-CGSPNYAAPE-VISGKLY 183
Query: 595 E--KSDVYNFGVVLLEIITSK 613
+ DV++ GV+L ++ +
Sbjct: 184 AGPEVDVWSCGVILYVMLCRR 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637
SDV++FGV++ E + R + +T ML KG+
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE 247
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637
SDV++FGV++ E + R + +T ML KG+
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE 247
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 432 RVLGNGGFGTVYHGY--LDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+ LG G FG V Y G +VA+K+ L+ S QG + + E+ L + H ++
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 77
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI------AIEAAK---- 534
L ++ E+ N ++ + D +S + R A+E
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K N+LL KIADFGLS + G + T+ G+P Y PE IS +L
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSN---IMTDGNFLKTS-CGSPNYAAPE-VISGKLY 189
Query: 595 E--KSDVYNFGVVLLEIITSK 613
+ DV++ GV+L ++ +
Sbjct: 190 AGPEVDVWSCGVILYVMLCRR 210
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT G+ +T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTP 184
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
+ T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 185 EVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637
SDV++FGV++ E + R + +T ML KG+
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE 231
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 432 RVLGNGGFGTVYHGY--LDGTEVAVKM-----LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+ LG G FG V Y G +VA+K+ L+ S QG + + E+ L + H ++
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 76
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI------AIEAAK---- 534
L ++ E+ N ++ + D +S + R A+E
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K N+LL KIADFGLS + G + T+ G+P Y PE IS +L
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSN---IMTDGNFLKTS-CGSPNYAAPE-VISGKLY 188
Query: 595 E--KSDVYNFGVVLLEIITSK 613
+ DV++ GV+L ++ +
Sbjct: 189 AGPEVDVWSCGVILYVMLCRR 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 208
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637
SDV++FGV++ E + R + +T ML KG+
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE 245
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMT 183
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQ-----FQAEVELLMRIHHKNLTTL 486
+V+G G FG V L + M + + K+ F+ E ++L+ K +TTL
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR-----LRIAIEAAK----VHR 537
+ N L+ ++ G+L LL E + R + IAI++ VHR
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-----NR 592
D+K NIL+ ++ADFG + GT ++ GTP Y+ PE + R
Sbjct: 200 DIKPDNILMDMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 593 LTEKSDVYNFGVVLLEIITSKS 614
+ D ++ GV + E++ ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGET 279
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMT 183
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 25/200 (12%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
VLG G +G VY G + +A+K + ++ + E+ L + HKN+ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL----RIAIEAAK-------VHRDV 539
E + E + G+L ALL + + E + + +E K VHRD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 540 KSTNILL---SGKFQAKIADFGLSRTFPVEGSGTH-VTTTIAGTPGYLDPEYYISN--RL 593
K N+L+ SG KI+DFG S+ +G + T T GT Y+ PE
Sbjct: 149 KGDNVLINTYSGVL--KISDFGTSKRL----AGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 594 TEKSDVYNFGVVLLEIITSK 613
+ +D+++ G ++E+ T K
Sbjct: 203 GKAADIWSLGCTIIEMATGK 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 13 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 68
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 128
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMT 184
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 185 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 235
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Query: 434 LGNGGFGTVYHG--YLDGTEVAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG G FG V Y +VA+K +S + + + + E+ L + H ++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR-----LRIAIEAAK----VHRDV 539
T+ ++ E+ A G L ++ E+ + EGR + AIE VHRD+
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIV-EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDL 134
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE--KS 597
K N+LL KIADFGLS + G + T+ G+P Y PE I+ +L +
Sbjct: 135 KPENLLLDDNLNVKIADFGLSN---IMTDGNFLKTS-CGSPNYAAPE-VINGKLYAGPEV 189
Query: 598 DVYNFGVVLLEIITSK 613
DV++ G+VL ++ +
Sbjct: 190 DVWSCGIVLYVMLVGR 205
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 431 ERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVG 488
E LG G VY GT+ A+K+L + + K + E+ +L+R+ H N+ L
Sbjct: 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKE 115
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAI----EAAKVHRDVK 540
+ T L+ E + G L ++ + E D ++ A+ E VHRD+K
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 541 STNILLSG---KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
N+L + KIADFGLS+ + T+ GTPGY PE +
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 598 DVYNFGVV 605
D+++ G++
Sbjct: 232 DMWSVGII 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 190
Query: 597 SDVYNFGVVLLEIIT 611
SDV++FGV++ E +
Sbjct: 191 SDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637
SDV++FGV++ E + R + +T ML KG+
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE 231
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ + I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMMT 183
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 188
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637
SDV++FGV++ E + R + +T ML KG+
Sbjct: 189 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA----MLEKGE 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 597 SDVYNFGVVLLEIIT 611
SDV++FGV++ E +
Sbjct: 201 SDVWSFGVLMWEAFS 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 33/198 (16%)
Query: 431 ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHHKNLTT 485
+RVLG G FG V + G E AVK++S + ++ EV+LL ++ H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 486 LVGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIE 531
L + ++ L+ E G L A ++ + +++ + +I
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKI--- 147
Query: 532 AAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
VHRD+K N+LL K + +I DFGLS F + GT Y+ PE
Sbjct: 148 ---VHRDLKPENLLLESKSKDANIRIIDFGLSTHF----EASKKXKDKIGTAYYIAPE-V 199
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ EK DV++ GV+L
Sbjct: 200 LHGTYDEKCDVWSTGVIL 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 25/200 (12%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
VLG G +G VY G + +A+K + ++ + E+ L + HKN+ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRL----RIAIEAAK-------VHRDV 539
E + E + G+L ALL + + E + + +E K VHRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 540 KSTNILL---SGKFQAKIADFGLSRTFPVEGSGTH-VTTTIAGTPGYLDPEYYISN--RL 593
K N+L+ SG KI+DFG S+ +G + T T GT Y+ PE
Sbjct: 135 KGDNVLINTYSGVL--KISDFGTSKRL----AGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 594 TEKSDVYNFGVVLLEIITSK 613
+ +D+++ G ++E+ T K
Sbjct: 189 GKAADIWSLGCTIIEMATGK 208
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTL 486
R LG GGF Y +D EV + P S ++ E+ + + + ++
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHR 537
G+ ++ ++ E +L L +A + E R +R I+ + +HR
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA-VTEPEARYFMRQTIQGVQYLHNNRVIHR 150
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+ L+ KI DFGL+ +G + GTP Y+ PE + +
Sbjct: 151 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 598 DVYNFGVVLLEIITSK-----SVIERTHERIHITQW 628
D+++ G +L ++ K S ++ T+ RI ++
Sbjct: 208 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTL 486
R LG GGF Y +D EV + P S ++ E+ + + + ++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHR 537
G+ ++ ++ E +L L +A + E R +R I+ + +HR
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA-VTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+ L+ KI DFGL+ +G + GTP Y+ PE + +
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 598 DVYNFGVVLLEIITSK-----SVIERTHERIHITQW 628
D+++ G +L ++ K S ++ T+ RI ++
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 259
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 432 RVLGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTL 486
R LG GGF Y +D EV + P S ++ E+ + + + ++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHR 537
G+ ++ ++ E +L L +A + E R +R I+ + +HR
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA-VTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+ L+ KI DFGL+ +G + GTP Y+ PE + +
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 598 DVYNFGVVLLEIITSK-----SVIERTHERIHITQW 628
D+++ G +L ++ K S ++ T+ RI ++
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 259
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNL----QALLLGE 515
K+ E+ L+ ++HKN+ L+ +E + ++ E M + NL Q L E
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 516 EADILSWEGRLRIAI--EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
L ++ I A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--CD 491
+G G FG V+ G G EVAVK+ S + + + +AE+ + + H+N+ + D
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 70
Query: 492 EG--TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------------- 534
G T L+ ++ +G+L L ++ EG +++A+ A
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA-----GTPGYLDPE 586
HRD+KS NIL+ IAD GL+ V T IA GT Y+ PE
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 587 YY---ISNRLTE---KSDVYNFGVVLLEIITSKSV 615
I+ + E ++D+Y G+V EI S+
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 431 ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHHKNLTT 485
+RVLG G FG V + G E AVK++S + ++ EV+LL ++ H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA-IEAAK---------- 534
L + ++ L+ E G L +I+S R R + ++AA+
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFD-------EIIS---RKRFSEVDAARIIRQVLSGIT 140
Query: 535 -------VHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
VHRD+K N+LL K + +I DFGLS F + GT Y+
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----EASKKMKDKIGTAYYIA 196
Query: 585 PEYYISNRLTEKSDVYNFGVVL 606
PE + EK DV++ GV+L
Sbjct: 197 PE-VLHGTYDEKCDVWSTGVIL 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 6 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 61
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 121
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMT 177
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 178 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP---GRDYIDQW 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 431 ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHHKNLTT 485
+RVLG G FG V + G E AVK++S + ++ EV+LL ++ H N+
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAI----EAAKVHR 537
L + ++ L+ E G L ++ E D ++ I + VHR
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 538 DVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
D+K N+LL K + +I DFGLS F + GT Y+ PE +
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHF----EASKKMKDKIGTAYYIAPE-VLHGTYD 211
Query: 595 EKSDVYNFGVVL 606
EK DV++ GV+L
Sbjct: 212 EKCDVWSTGVIL 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--CD 491
+G G FG V+ G G EVAVK+ S + + + +AE+ + + H+N+ + D
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 108
Query: 492 EG--TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------------- 534
G T L+ ++ +G+L L ++ EG +++A+ A
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA-----GTPGYLDPE 586
HRD+KS NIL+ IAD GL+ V T IA GT Y+ PE
Sbjct: 166 PAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 587 YY---ISNRLTE---KSDVYNFGVVLLEIITSKSV 615
I+ + E ++D+Y G+V EI S+
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 492
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Query: 597 SDVYNFGVVLLEIIT 611
SDV++FGV++ E +
Sbjct: 553 SDVWSFGVLMWEAFS 567
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--CD 491
+G G FG V+ G G EVAVK+ S + + + +AE+ + + H+N+ + D
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 69
Query: 492 EG--TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------------- 534
G T L+ ++ +G+L L ++ EG +++A+ A
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA-----GTPGYLDPE 586
HRD+KS NIL+ IAD GL+ V T IA GT Y+ PE
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 587 YY---ISNRLTE---KSDVYNFGVVLLEIITSKSV 615
I+ + E ++D+Y G+V EI S+
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 17 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 72
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 132
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + + T
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMT 188
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 189 PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP---GRDYIDQW 239
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 434 LGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GGF + D EV + P S ++ E+ + + H+++ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHRDV 539
+ ++ ++ E +L L +A + E R LR + + +HRD+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K N+ L+ + KI DFGL+ +G T+ GTP Y+ PE + + DV
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 600 YNFGVVLLEIITSK-----SVIERTHERIHITQW 628
++ G ++ ++ K S ++ T+ RI ++
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 238
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 431 ERVLGNGGFGTVYHGYLDGTEVAVK-----MLSPSSAQGYK-QFQAEVELLMRIHHKNLT 484
++ LG+G FGTV GY +V + + ++ K + AE ++ ++ + +
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAI----EAAKVH 536
++G C E + L+ E G L L ++ +I+ ++ + + E+ VH
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 493
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+ + N+LL + AKI+DFGLS+ + + T + PE + + K
Sbjct: 494 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 553
Query: 597 SDVYNFGVVLLEIIT 611
SDV++FGV++ E +
Sbjct: 554 SDVWSFGVLMWEAFS 568
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 434 LGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GGF + D EV + P S ++ E+ + + H+++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHRDV 539
+ ++ ++ E +L L +A + E R LR + + +HRD+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K N+ L+ + KI DFGL+ +G T+ GTP Y+ PE + + DV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 600 YNFGVVLLEIITSK-----SVIERTHERIHITQW 628
++ G ++ ++ K S ++ T+ RI ++
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 434 LGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GGF + D EV + P S ++ E+ + + H+++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHRDV 539
+ ++ ++ E +L L +A + E R LR + + +HRD+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K N+ L+ + KI DFGL+ +G T+ GTP Y+ PE + + DV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 600 YNFGVVLLEIITSK-----SVIERTHERIHITQW 628
++ G ++ ++ K S ++ T+ RI ++
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 177 GXKYYSTAV----DIWSLGCIFAEMVTRRAL 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 424 LRITN-NFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPS---SAQGYKQFQAEVELLMR 477
+++T+ NF VLG G FG V GT+ AVK+L + E +L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 478 IHHKNLTTLVGYCDEGTNR-GLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI-- 530
T + C + +R + E++ G+L Q + +E + + + I +
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 531 --EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
++RD+K N++L + KIADFG+ + +G T GTP Y+ PE
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---TTKXFCGTPDYIAPEII 514
Query: 589 ISNRLTEKSDVYNFGVVLLEIITSKSVIERTHE 621
+ D + FGV+L E++ ++ E E
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 14 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 69
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 129
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTSFMMV 185
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 236
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNL----QALLLGE 515
K+ E+ L+ ++HKN+ L+ +E + ++ E M + NL Q L E
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 516 EADILSWEGRLRIAI--EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
L ++ I A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 434 LGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GGF + D EV + P S ++ E+ + + H+++ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHRDV 539
+ ++ ++ E +L L +A + E R LR + + +HRD+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K N+ L+ + KI DFGL+ +G V + GTP Y+ PE + + DV
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 600 YNFGVVLLEIITSK-----SVIERTHERIHITQW 628
++ G ++ ++ K S ++ T+ RI ++
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 256
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--CD 491
+G G FG V+ G G EVAVK+ S + + + +AE+ + + H+N+ + D
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 72
Query: 492 EG--TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------------- 534
G T L+ ++ +G+L L ++ EG +++A+ A
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA-----GTPGYLDPE 586
HRD+KS NIL+ IAD GL+ V T IA GT Y+ PE
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 587 YY---ISNRLTE---KSDVYNFGVVLLEIITSKSV 615
I+ + E ++D+Y G+V EI S+
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNL----QALLLGE 515
K+ E+ L+ ++HKN+ L+ +E + ++ E M + NL Q L E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHE 126
Query: 516 EADILSWEGRLRIAI--EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573
L ++ I A +HRD+K +NI++ KI DFGL+RT + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART----AGTSFMM 182
Query: 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
T T Y PE + E D+++ G ++ E+I + T HI QW
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD---HIDQW 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--CD 491
+G G FG V+ G G EVAVK+ S + + + +AE+ + + H+N+ + D
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 95
Query: 492 EG--TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------------- 534
G T L+ ++ +G+L L ++ EG +++A+ A
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA-----GTPGYLDPE 586
HRD+KS NIL+ IAD GL+ V T IA GT Y+ PE
Sbjct: 153 PAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 587 YY---ISNRLTE---KSDVYNFGVVLLEIITSKSV 615
I+ + E ++D+Y G+V EI S+
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ +G G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+M G++ + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + K+ADFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ +G G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+M G++ + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + K+ADFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 435 GNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT 494
G+ G + G +VAVKM+ Q + EV ++ H N+ + G
Sbjct: 56 GSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE 115
Query: 495 NRGLIYEFMANGNLQALL----LGEEADILSWEGRLR-IAIEAAK--VHRDVKSTNILLS 547
++ EF+ G L ++ L EE E L+ +A A+ +HRD+KS +ILL+
Sbjct: 116 ELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Query: 548 GKFQAKIADFG----LSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFG 603
+ K++DFG +S+ P + GTP ++ PE + + D+++ G
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKR-------KXLVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 604 VVLLEII 610
++++E++
Sbjct: 229 IMVIEMV 235
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 41/215 (19%)
Query: 434 LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--CD 491
+G G FG V+ G G EVAVK+ S + + + +AE+ + + H+N+ + D
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 75
Query: 492 EG--TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK--------------- 534
G T L+ ++ +G+L L ++ EG +++A+ A
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA-----GTPGYLDPE 586
HRD+KS NIL+ IAD GL+ V T IA GT Y+ PE
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLGLA----VRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 587 YY---ISNRLTE---KSDVYNFGVVLLEIITSKSV 615
I+ + E ++D+Y G+V EI S+
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 223
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 434 LGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GGF + D EV + P S ++ E+ + + H+++ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHRDV 539
+ ++ ++ E +L L +A + E R LR + + +HRD+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K N+ L+ + KI DFGL+ +G V + GTP Y+ PE + + DV
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 600 YNFGVVLLEIITSK-----SVIERTHERIHITQW 628
++ G ++ ++ K S ++ T+ RI ++
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 33/206 (16%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGY--- 489
+G G +G V+ G G VAVK+ S Q + + + E+ + + H N+ +
Sbjct: 15 CVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 490 -CDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------------- 534
+ T LI + +G+L L + L LR+A+ AA
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQG 130
Query: 535 ----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV-TTTIAGTPGYLDPEYYI 589
HRD KS N+L+ Q IAD GL+ + GT Y+ PE
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLD 190
Query: 590 SNRLTEK------SDVYNFGVVLLEI 609
T+ +D++ FG+VL EI
Sbjct: 191 EQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 171
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 64
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 184 GXKYYSTAV----DIWSLGCIFAEMVTRRAL 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 424 LRITN-NFERVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSA---QGYKQFQAEVELLMR 477
+++T+ NF VLG G FG V GT+ AVK+L + E +L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 478 IHHKNLTTLVGYCDEGTNR-GLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI-- 530
T + C + +R + E++ G+L Q + +E + + + I +
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 531 --EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
++RD+K N++L + KIADFG+ + +G T GTP Y+ PE
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV---TTKXFCGTPDYIAPEII 193
Query: 589 ISNRLTEKSDVYNFGVVLLEIITSKSVIERTHE 621
+ D + FGV+L E++ ++ E E
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 56
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 170
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 171
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 56
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 170
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 61
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 175
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 177 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 59
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 179 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 205
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 428 NNFERV----LGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FER+ GNGG T G +A K++ + Q E+++L H N
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL---HECN 72
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWE--GRLRIAI------- 530
+VG+ + G + E M G+L +L +EA + E G++ IA+
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYL 130
Query: 531 --EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ +HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 131 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMAPERL 185
Query: 589 ISNRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 58
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 172
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 56
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 431 ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHHKNLTT 485
+RVLG G FG V + G E AVK++S + ++ EV+LL ++ H N+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA-IEAAK---------- 534
L + ++ L+ E G L +I+S R R + ++AA+
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFD-------EIIS---RKRFSEVDAARIIRQVLSGIT 163
Query: 535 -------VHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
VHRD+K N+LL K + +I DFGLS F + GT Y+
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----EASKKMKDKIGTAYYIA 219
Query: 585 PEYYISNRLTEKSDVYNFGVVL 606
PE + EK DV++ GV+L
Sbjct: 220 PE-VLHGTYDEKCDVWSTGVIL 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 56
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 176 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 64
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 178
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 210
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 60
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 180 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 59
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 179 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRA 171
Query: 585 PEYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
PE + + + D+++ G + E++T +++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 58
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 178 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 60
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANG-----NLQALLLGEEADILSWEGRLRIAIE 531
++H N+ L+ L++EF++ + AL I S+ +L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 AAK----VHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 181 CKYYSTAV----DIWSLGCIFAEMVTRRAL 206
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 431 ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHHKNLTT 485
+RVLG G FG V + G E AVK++S + ++ EV+LL ++ H N+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA-IEAAK---------- 534
L + ++ L+ E G L +I+S R R + ++AA+
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFD-------EIIS---RKRFSEVDAARIIRQVLSGIT 164
Query: 535 -------VHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
VHRD+K N+LL K + +I DFGLS F + GT Y+
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----EASKKMKDKIGTAYYIA 220
Query: 585 PEYYISNRLTEKSDVYNFGVVL 606
PE + EK DV++ GV+L
Sbjct: 221 PE-VLHGTYDEKCDVWSTGVIL 241
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 60
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 180 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 59
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 179 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 58
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 178 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 58
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 178 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 36/206 (17%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
++G+GGFG V+ +DG +K + ++ + + EV+ L ++ H N+ G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCW 73
Query: 491 D----------EGTNRG------LIYEFMANGNLQALL---LGEEAD-ILSWEGRLRIAI 530
D + ++R + EF G L+ + GE+ D +L+ E +I
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 531 EAAKVH------RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
+H RD+K +NI L Q KI DFGL + +G GT Y+
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS----KGTLRYMS 189
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEII 610
PE S ++ D+Y G++L E++
Sbjct: 190 PEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 434 LGNGGFGTVYH-GYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVG 488
LG GGF + D EV + P S ++ E+ + + H+++ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 489 YCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR--LRIAIEAAK-------VHRDV 539
+ ++ ++ E +L L +A + E R LR + + +HRD+
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKA-LTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
K N+ L+ + KI DFGL+ +G V + GTP Y+ PE + + DV
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 600 YNFGVVLLEIITSK-----SVIERTHERIHITQW 628
++ G ++ ++ K S ++ T+ RI ++
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 61
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 181 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 60
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANG-----NLQALLLGEEADILSWEGRLRIAIE 531
++H N+ L+ L++EF++ + AL I S+ +L +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 532 AAK----VHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 181 CKYYSTAV----DIWSLGCIFAEMVTRRAL 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 59
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANG-----NLQALLLGEEADILSWEGRLRIAIE 531
++H N+ L+ L++EF++ + AL I S+ +L +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 532 AAK----VHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 180 CKYYSTAV----DIWSLGCIFAEMVTRRAL 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 130
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 190 WSCGIVLTAMLAGE 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANG-----NLQALLLGEEADILSWEGRLRIAIE 531
++H N+ L+ L++EF+ + AL I S+ +L +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 532 AAK----VHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 178 CKYYSTAV----DIWSLGCIFAEMVTRRAL 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 60
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRL 526
++H N+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 527 RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLD 584
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 180 GCKYYSTAV----DIWSLGCIFAEMVTRRAL 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
RVLG GGFG V + T ++ +G E ++L +++ + + +L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALL--LGE----EADILSWEGRLRIAIEAAK----VH 536
+ L+ M G+L+ + +G+ EA + + + +E V+
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K NILL +I+D GL+ P G + + GT GY+ PE + R T
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRV-GTVGYMAPEVVKNERYTFS 365
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERI 623
D + G +L E+I +S ++ ++I
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 58
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANG-----NLQALLLGEEADILSWEGRLRIAIE 531
++H N+ L+ L++EF++ + AL I S+ +L +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 532 AAK----VHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 179 CKYYSTAV----DIWSLGCIFAEMVTRRAL 204
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 49/219 (22%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
++G+GGFG V+ +DG ++ + ++ + + EV+ L ++ H N+ G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHYNGCW 74
Query: 491 D-----------------------EGTNRG------LIYEFMANGNLQALL---LGEEAD 518
D + ++R + EF G L+ + GE+ D
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 519 -ILSWEGRLRIA-----IEAAK-VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571
+L+ E +I I + K +HRD+K +NI L Q KI DFGL + +G T
Sbjct: 135 KVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR 194
Query: 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEII 610
GT Y+ PE S ++ D+Y G++L E++
Sbjct: 195 S----KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTE-----VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
RVLG GGFG V + T ++ +G E ++L +++ + + +L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALL--LGE----EADILSWEGRLRIAIEAAK----VH 536
+ L+ M G+L+ + +G+ EA + + + +E V+
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK 596
RD+K NILL +I+D GL+ P G + + GT GY+ PE + R T
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRV-GTVGYMAPEVVKNERYTFS 365
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERI 623
D + G +L E+I +S ++ ++I
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + GT Y+ PE E DV
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 192 WSCGIVLTAMLAGE 205
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT G+ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMEP 184
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
+ T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 185 EVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFP---GRDYIDQW 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 429 NFERVLGNGGFGTVYHGYLDGTEV--AVKMLSPSS---AQGYKQFQAEVELLMR-IHHKN 482
+F +V+G G FG V EV AVK+L + + K +E +L++ + H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI-AIEAAK------- 534
L L + +++ G L L E + E R R A E A
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL---EPRARFYAAEIASALGYLHS 157
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K NILL + + DFGL + +E + T T+T GTP YL PE
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNST--TSTFCGTPEYLAPEVLHKQ 214
Query: 592 RLTEKSDVYNFGVVLLEII 610
D + G VL E++
Sbjct: 215 PYDRTVDWWCLGAVLYEML 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 21/197 (10%)
Query: 433 VLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
+LG G FG V+ G ++A K++ + ++ + E+ ++ ++ H NL L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 491 DEGTNRGLIYEFMANGNLQALLLGE-----EADILSW-----EGRLRIAIEAAKVHRDVK 540
+ + L+ E++ G L ++ E E D + + EG +R + +H D+K
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG-IRHMHQMYILHLDLK 214
Query: 541 STNILLSGK--FQAKIADFGLSRTF-PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
NIL + Q KI DFGL+R + P E + GTP +L PE + ++ +
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-----GTPEFLAPEVVNYDFVSFPT 269
Query: 598 DVYNFGVVLLEIITSKS 614
D+++ GV+ +++ S
Sbjct: 270 DMWSVGVIAYMLLSGLS 286
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 37/210 (17%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
+ G FG V+ L VAVK+ Q + Q + E+ + H+NL +
Sbjct: 22 IKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSW-QSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 493 GTNRG----LIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-------------- 534
G+N LI F G+L L G +I++W +A ++
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 535 -------VHRDVKSTNILLSGKFQAKIADFGLSRTF-PVEGSGTHVTTTIAGTPGYLDPE 586
HRD KS N+LL A +ADFGL+ F P + G T GT Y+ PE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD--THGQVGTRRYMAPE 195
Query: 587 YY-----ISNRLTEKSDVYNFGVVLLEIIT 611
+ D+Y G+VL E+++
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G +G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 56
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYE--------FMANGNLQALLLGE-EADILSWEGRLR 527
++H N+ L+ L++E FM L + L ++ + L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 528 IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRAP 171
Query: 586 EYYISNRLTEKS-DVYNFGVVLLEIITSKSV 615
E + + + D+++ G + E++T +++
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGY-KQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V G +VA+K LS P ++ + K+ E+ LL + H+N+ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 490 CDEGTNRGLIYEF-----MANGNLQALLLGEEAD------ILSWEGRLRIAIEAAKVHRD 538
++ Y+F +LQ ++ E ++ + L+ A VHRD
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 169
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEKS 597
+K N+ ++ + KI DFGL+R E +G VT Y PE +S +
Sbjct: 170 LKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR------WYRAPEVILSWMHYNQTV 223
Query: 598 DVYNFGVVLLEIITSKSVIE 617
D+++ G ++ E++T K++ +
Sbjct: 224 DIWSVGCIMAEMLTGKTLFK 243
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
+NF ++ G G G V + G VAVK + Q + EV ++ H+N+
Sbjct: 32 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL----LGEE---ADILSWEGRLRIAIEAAKVHRD 538
+ G ++ EF+ G L ++ + EE A L+ L + +HRD
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+KS +ILL+ + K++DFG E + GTP ++ PE + D
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 599 VYNFGVVLLEII 610
+++ G++++E++
Sbjct: 208 IWSLGIMVIEMV 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGY-KQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V G +VA+K LS P ++ + K+ E+ LL + H+N+ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 490 CDEGTNRGLIYEF-----MANGNLQALL----LGEEADILSWE--GRLRIAIEAAKVHRD 538
++ Y+F +LQ ++ E+ L ++ L+ A VHRD
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 151
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEKS 597
+K N+ ++ + KI DFGL+R E +G VT Y PE +S +
Sbjct: 152 LKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR------WYRAPEVILSWMHYNQTV 205
Query: 598 DVYNFGVVLLEIITSKSVIE 617
D+++ G ++ E++T K++ +
Sbjct: 206 DIWSVGCIMAEMLTGKTLFK 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS--------PSSAQGYKQFQAEVELLM 476
NF++V +G G +G VY L G VA+K + PS+A E+ LL
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 60
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYE--------FMANGNLQALLLGE-EADILSWEGRLR 527
++H N+ L+ L++E FM L + L ++ + L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 528 IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDP 585
+HRD+K N+L++ + K+ADFGL+R F PV V T P L
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y S + D+++ G + E++T +++
Sbjct: 181 CKYYSTAV----DIWSLGCIFAEMVTRRAL 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G+ T T+ GTP YL PE +S
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGA----TWTLCGTPEYLAPEIILSKG 235
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 236 YNKAVDWWALGVLIYEM 252
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
+NF ++ G G G V + G VAVK + Q + EV ++ H+N+
Sbjct: 23 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL----LGEE---ADILSWEGRLRIAIEAAKVHRD 538
+ G ++ EF+ G L ++ + EE A L+ L + +HRD
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+KS +ILL+ + K++DFG E + GTP ++ PE + D
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 599 VYNFGVVLLEII 610
+++ G++++E++
Sbjct: 199 IWSLGIMVIEMV 210
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 410 SFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLDGTE--VAVKMLS-PSSAQGY- 465
S E+ + F+ VL+ N + +G+G G V Y E VA+K LS P Q +
Sbjct: 12 SVEIGDSTFT---VLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 466 KQFQAEVELLMRIHHKNLTTLVGY------CDEGTNRGLIYEFMANGNLQALLLGEEADI 519
K+ E+ L+ ++HKN+ L+ +E + ++ E M Q + + + +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHER 127
Query: 520 LSWE-GRLRIAIE----AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574
+S+ ++ I+ A +HRD+K +NI++ KI DFGL+RT G+ +
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMEP 184
Query: 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW 628
+ T Y PE + E D+++ G ++ E++ K + R +I QW
Sbjct: 185 EVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFP---GRDYIDQW 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
+NF ++ G G G V + G VAVK + Q + EV ++ H+N+
Sbjct: 34 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL----LGEE---ADILSWEGRLRIAIEAAKVHRD 538
+ G ++ EF+ G L ++ + EE A L+ L + +HRD
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+KS +ILL+ + K++DFG E + GTP ++ PE + D
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 599 VYNFGVVLLEII 610
+++ G++++E++
Sbjct: 210 IWSLGIMVIEMV 221
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAV-KMLSPSSAQGYKQFQA-EVELLMRIHHKN 482
NF++V +G G +G VY L G VA+ K+ + +G E+ LL ++H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRLRIAIEA 532
+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y PE +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRAPEILLG 177
Query: 591 NRLTEKS-DVYNFGVVLLEIITSKSV 615
+ + D+++ G + E++T +++
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 429 NFERV--LGNGGFGTVYHGY--LDGTEVAV-KMLSPSSAQGYKQFQA-EVELLMRIHHKN 482
NF++V +G G +G VY L G VA+ K+ + +G E+ LL ++H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE----------EADILSWEGRLRIAIEA 532
+ L+ L++EF+ + +L+ + ++ + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRD+K N+L++ + K+ADFGL+R F PV + TH T+ Y PE +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTL----WYRAPEILLG 176
Query: 591 NRLTEKS-DVYNFGVVLLEIITSKSV 615
+ + D+++ G + E++T +++
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRAL 202
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 432 RVLGNGGFGTVY-----HGYLDGTEVAVKMLSPSS-------------AQGYKQFQAEVE 473
R LG+G +G V +G+ +E A+K++ S + +++ E+
Sbjct: 42 RKLGSGAYGEVLLCKEKNGH---SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98
Query: 474 LLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIA 529
LL + H N+ L ++ L+ EF G L ++ +E D + ++
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 530 I----EAAKVHRDVKSTNILLSGK---FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
I + VHRD+K NILL K KI DFGLS F S + GT Y
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKDYKLRDRLGTAYY 214
Query: 583 LDPEYYISNRLTEKSDVYNFGVVL 606
+ PE + + EK DV++ GV++
Sbjct: 215 IAPE-VLKKKYNEKCDVWSCGVIM 237
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 451 EVAVKMLSPSSAQGYKQF-QAEVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNL 508
EV + LSP + ++ + E +L ++ H ++ TL+ + + L+++ M G L
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 509 QALLLGEEADILSWEGR--LRIAIEAAK-------VHRDVKSTNILLSGKFQAKIADFGL 559
L E+ + E R +R +EA VHRD+K NILL Q +++DFG
Sbjct: 188 FDYL-TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG- 245
Query: 560 SRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR------LTEKSDVYNFGVVLLEIIT 611
F + GTPGYL PE + ++ D++ GV+L ++
Sbjct: 246 ---FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 449 GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508
G +VAVK + Q + EV ++ HH N+ + G ++ EF+ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 509 QALL----LGEE---ADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSR 561
++ + EE LS L +HRD+KS +ILL+ + K++DFG
Sbjct: 130 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCA 189
Query: 562 TFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEII 610
E + GTP ++ PE + D+++ G++++E+I
Sbjct: 190 QVSKE---VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T T+ GTP YL PE +S
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWTLCGTPEYLAPEIILSKG 200
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 201 YNKAVDWWALGVLIYEM 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
+NF ++ G G G V + G VAVK + Q + EV ++ H+N+
Sbjct: 27 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL----LGEE---ADILSWEGRLRIAIEAAKVHRD 538
+ G ++ EF+ G L ++ + EE A L+ L + +HRD
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+KS +ILL+ + K++DFG E + GTP ++ PE + D
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 599 VYNFGVVLLEII 610
+++ G++++E++
Sbjct: 203 IWSLGIMVIEMV 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 430 FERVLGNGGFGTV--YHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
F + LG GGF V G DG A+K + Q ++ Q E ++ +H N+ LV
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 488 GYC--DEGTNRG--LIYEFMANGNL--QALLLGEEADILSWEGRLRI---------AIEA 532
YC + G L+ F G L + L ++ + L+ + L + AI A
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 533 -AKVHRDVKSTNILLSGKFQAKIADFGL--SRTFPVEGSGTHVT----TTIAGTPGYLDP 585
HRD+K TNILL + Q + D G VEGS +T T Y P
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 586 EYYISNR---LTEKSDVYNFGVVLLEII 610
E + + E++DV++ G VL ++
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ +G G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + K+ADFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
+NF ++ G G G V + G VAVK + Q + EV ++ H+N+
Sbjct: 154 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL----LGEE---ADILSWEGRLRIAIEAAKVHRD 538
+ G ++ EF+ G L ++ + EE A L+ L + +HRD
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+KS +ILL+ + K++DFG E + GTP ++ PE + D
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 599 VYNFGVVLLEII 610
+++ G++++E++
Sbjct: 330 IWSLGIMVIEMV 341
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T +AGTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLAGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-FQAEVELLMRIHHKNLTTLVG 488
+ LG G G V TE VAVK++ A + + E+ + ++H+N+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 489 YCDEGTNRGLIYEFMANGNL----QALLLGEEADILSWEGRLRIAI----EAAKVHRDVK 540
+ EG + L E+ + G L + + E D + +L + HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDV 599
N+LL + KI+DFGL+ F + + + GT Y+ PE E DV
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRY-NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 600 YNFGVVLLEIITSK 613
++ G+VL ++ +
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T T+ GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWTLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 34/205 (16%)
Query: 426 ITNNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQ--GYKQFQAEVELLMRIH 479
++ ++RV LG+G +G V + E A+K++ +S + EV +L +
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGR 525
H N+ L + ++ N L+ E G L A+++ + +++ +
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 526 LRIAIEAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
I VHRD+K N+LL K + KI DFGLS F + GT Y
Sbjct: 155 HNI------VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK----MKERLGTAYY 204
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLL 607
+ PE + + EK DV++ GV+L
Sbjct: 205 IAPE-VLRKKYDEKCDVWSIGVILF 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 53/231 (22%)
Query: 425 RITNNFE--RVLGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGYKQFQAEVELLMRIH 479
R +FE + LG GGFG V+ +D A+K + P+ ++ EV+ L ++
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 480 HKNLTTLV-GYCDEGTNRGL------IYEFMANGNLQALLLGEEADILSW-EGR------ 525
H + + ++ T L +Y ++ + L + ++ W GR
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQ------MQLCRKENLKDWMNGRCTIEER 115
Query: 526 -----LRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTF------- 563
L I ++ A+ +HRD+K +NI + K+ DFGL
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 564 ----PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEII 610
P+ H T GT Y+ PE N + K D+++ G++L E++
Sbjct: 176 TVLTPMPAYARH--TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT 485
+NF ++ G G G V + G VAVK + Q + EV ++ H+N+
Sbjct: 77 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALL----LGEE---ADILSWEGRLRIAIEAAKVHRD 538
+ G ++ EF+ G L ++ + EE A L+ L + +HRD
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSD 598
+KS +ILL+ + K++DFG E + GTP ++ PE + D
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 599 VYNFGVVLLEII 610
+++ G++++E++
Sbjct: 253 IWSLGIMVIEMV 264
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
LT L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
LT L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 30/206 (14%)
Query: 428 NNFE--RVLGNGGFGTVY---------HGYLDGTEVAVKMLSPSSAQGYKQFQAEVE--L 474
++FE +VLG G FG V+ G+L A+K+L ++ + + + ++E +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHL----YAMKVLKKATLKVRDRVRTKMERDI 83
Query: 475 LMRIHHKNLTTL-VGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIA 529
L ++H + L + EG LI +F+ G+L L E E D+ + L +
Sbjct: 84 LADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG 142
Query: 530 IEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDP 585
++ ++RD+K NILL + K+ DFGLS+ + + GT Y+ P
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY---SFCGTVEYMAP 199
Query: 586 EYYISNRLTEKSDVYNFGVVLLEIIT 611
E + +D +++GV++ E++T
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
LT L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 116/292 (39%), Gaps = 58/292 (19%)
Query: 424 LRITNNFER--VLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH 479
LR ++FE VLG G FG V LD A+K + + + +EV LL ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 480 H-------------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL----LGEEADILSW 522
H +N + + + + E+ NG L L+ L ++ D +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD--EY 118
Query: 523 EGRLRIAIEAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFP----------- 564
R +EA +HRD+K NI + KI DFGL++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 565 -VEGSGTHVTTTIAGTPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSVIERTHER 622
+ GS ++T+ I GT Y+ E + EK D+Y+ G++ E+I S ER
Sbjct: 179 NLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST---GMER 234
Query: 623 IHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRP 674
++I L K SI P DFD N + +I + KRP
Sbjct: 235 VNI-------LKKLRSVSIEFP---PDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 16/191 (8%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G +G+VY G VA+K + S ++ E+ ++ + ++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 492 EGTNRGLIYEFMANGNL--------QALLLGEEADILSWEGR-LRIAIEAAKVHRDVKST 542
+ T+ ++ E+ G++ + L E A IL + L K+HRD+K+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 543 NILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNF 602
NILL+ + AK+ADFG++ + GTP ++ PE +D+++
Sbjct: 155 NILLNTEGHAKLADFGVAGQL---TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 603 GVVLLEIITSK 613
G+ +E+ K
Sbjct: 212 GITAIEMAEGK 222
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 466 KQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGL--IYEFMANGNLQALL----LGEEADI 519
+Q E+ +L ++ H N+ LV D+ L ++E + G + + L E+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 520 LSWEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575
++ ++ IE +HRD+K +N+L+ KIADFG+S F +GS ++ T
Sbjct: 141 FYFQDLIK-GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDALLSNT 197
Query: 576 IAGTPGYLDPEYYISNRLT---EKSDVYNFGVVL 606
+ GTP ++ PE R + DV+ GV L
Sbjct: 198 V-GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ---FQAEVELLMRIHHKNLTTL 486
+V+G G FG V + TE A+K+L+ + F+ E ++L+ + +T L
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILS-----WEGRLRIAIEAAK----VHR 537
+ + L+ ++ G+L LL E + + G + +AI++ VHR
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 199
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-----NR 592
D+K N+LL ++ADFG + GT ++ GTP Y+ PE + +
Sbjct: 200 DIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 593 LTEKSDVYNFGVVLLEIITSKS 614
+ D ++ GV + E++ ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGET 279
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 201
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 202 YNKAVDWWALGVLIYEM 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ---FQAEVELLMRIHHKNLTTL 486
+V+G G FG V + TE A+K+L+ + F+ E ++L+ + +T L
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILS-----WEGRLRIAIEAAK----VHR 537
+ + L+ ++ G+L LL E + + G + +AI++ VHR
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 215
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-----NR 592
D+K N+LL ++ADFG + GT ++ GTP Y+ PE + +
Sbjct: 216 DIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 593 LTEKSDVYNFGVVLLEIITSKS 614
+ D ++ GV + E++ ++
Sbjct: 274 YGPECDWWSLGVCMYEMLYGET 295
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 155
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 209
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 210 YNKAVDWWALGVLIYEM 226
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + ++ DFG ++ V+G T + GTP YL PE IS
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIIISKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ T GTP YL PE N
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKTFCGTPEYLAPEVLEDN 180
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGEEADILS--WEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G A+ + + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 40/214 (18%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
++G G +G VY G LD VAVK+ S ++ Q + + + + + H N+ + +
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFIVGDER 78
Query: 493 GTNRG-----LIYEFMANGNLQALLLGEEADILSWEGRLRIA------------------ 529
T G L+ E+ NG+L L +D W R+A
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 530 -IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFP-----VEGSGTHVTTTIAGTPGYL 583
+ A HRD+ S N+L+ I+DFGLS G + + GT Y+
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 584 DPEYY---ISNRLTEKS----DVYNFGVVLLEII 610
PE ++ R E + D+Y G++ EI
Sbjct: 196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 68 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ T GTP YL PE N
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKTFCGTPEYLAPEVLEDN 183
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 216
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ T GTP YL PE N
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKTFCGTPEYLAPEVLEDN 180
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 430 FERVLGNGGFGTVYHGY--LDGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTL 486
+G GGF V L G VA+K++ ++ + + E+E L + H+++ L
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 487 VGYCDEGTNRGLIYEFMANGNL------QALLLGEEADILSWEGRLRIAIEAAK--VHRD 538
+ ++ E+ G L Q L EE ++ + +A ++ HRD
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRD 133
Query: 539 VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR-LTEKS 597
+K N+L + K+ DFGL +G+ + T G+ Y PE L ++
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAK--PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 598 DVYNFGVVLLEIIT 611
DV++ G++L ++
Sbjct: 192 DVWSMGILLYVLMC 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 207
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 208 YNKAVDWWALGVLIYEM 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 207
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 208 YNKAVDWWALGVLIYEM 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 235
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 236 YNKAVDWWALGVLIYEM 252
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLXGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 420 YSNVLRITNNFERVLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR 477
+ ++ ++T+ +LG G + V +G E AVK++ + + EVE L +
Sbjct: 10 FEDMYKLTSE---LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 478 IH-HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK-- 534
+KN+ L+ + ++ T L++E + G++ A + ++ R+ + AA
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 535 ------VHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVT----TTIAGTPG 581
HRD+K NIL + KI DF L + S T +T TT G+
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 582 YLDPEY--YISNRLT---EKSDVYNFGVVL 606
Y+ PE +++ T ++ D+++ GVVL
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
+G G +G V+ G G VAVK+ S + + + + E+ + + H+N+ + +
Sbjct: 15 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIA--SD 71
Query: 493 GTNR---------------GLIYEFMANGNLQAL-LLGEEADILSWEGRLRIAI-----E 531
T+R G +Y+++ L + L I S L I I +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT-IAGTPGYLDPEYYIS 590
A HRD+KS NIL+ Q IAD GL+ + V GT Y+ PE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 591 NRLTE------KSDVYNFGVVLLEI---ITSKSVIE 617
+ + D++ FG+VL E+ + S ++E
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + NILLS K KI DFGL+R + +V A P ++ PE
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
Query: 594 TEKSDVYNFGVVLLEIIT 611
T +SDV++FGV+L EI +
Sbjct: 278 TIQSDVWSFGVLLWEIFS 295
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 62
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 177
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
+G G +G V+ G G VAVK+ S + + + + E+ + + H+N+ + +
Sbjct: 15 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIA--SD 71
Query: 493 GTNR---------------GLIYEFMANGNLQAL-LLGEEADILSWEGRLRIAI-----E 531
T+R G +Y+++ L + L I S L I I +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV-TTTIAGTPGYLDPEYYIS 590
A HRD+KS NIL+ Q IAD GL+ + V GT Y+ PE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 591 NRLTE------KSDVYNFGVVLLEI---ITSKSVIE 617
+ + D++ FG+VL E+ + S ++E
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + NILLS K KI DFGL+R + +V A P ++ PE
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
Query: 594 TEKSDVYNFGVVLLEIIT 611
T +SDV++FGV+L EI +
Sbjct: 273 TIQSDVWSFGVLLWEIFS 290
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + NILLS K KI DFGL+R + +V A P ++ PE
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
Query: 594 TEKSDVYNFGVVLLEIIT 611
T +SDV++FGV+L EI +
Sbjct: 280 TIQSDVWSFGVLLWEIFS 297
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 124
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 239
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L K+ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFGL++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + NILLS K KI DFGL+R + +V A P ++ PE
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARD--IYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
Query: 594 TEKSDVYNFGVVLLEIIT 611
T +SDV++FGV+L EI +
Sbjct: 271 TIQSDVWSFGVLLWEIFS 288
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E + ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + K+ADFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 29/254 (11%)
Query: 423 VLRITNNFE--RVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYK-QFQAEVELLMR 477
V I+++F+ +LG G +G V G VA+K + P + + E+++L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 478 IHHKNLTTLVGYCD----EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA 533
H+N+ T+ E N I + + +L ++ + + + + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 534 KV-------HRDVKSTNILLSGKFQAKIADFGLSRTFPVE--------GSGTHVTTTIAG 578
KV HRD+K +N+L++ K+ DFGL+R G + +T +A
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA- 184
Query: 579 TPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSVI---ERTHERIHITQWVSFMLG 634
T Y PE + S + + DV++ G +L E+ + + + H+ + I +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 635 KGDIESIVDPRLHE 648
D+ I PR E
Sbjct: 245 DNDLRCIESPRARE 258
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + K+ DFG ++ V+G T + GTP YL PE +S
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 62
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 177
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ ++
Sbjct: 215 YNKAVDWWALGVLIYQM 231
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 62
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 177
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 62
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 177
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE 492
+G G +G V+ G G VAVK+ S + + + + E+ + + H+N+ + +
Sbjct: 44 CVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIA--SD 100
Query: 493 GTNR---------------GLIYEFMANGNLQAL-LLGEEADILSWEGRLRIAI-----E 531
T+R G +Y+++ L + L I S L I I +
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 160
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT-IAGTPGYLDPEYYIS 590
A HRD+KS NIL+ Q IAD GL+ + V GT Y+ PE
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 220
Query: 591 NRLTE------KSDVYNFGVVLLEI---ITSKSVIE 617
+ + D++ FG+VL E+ + S ++E
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 256
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 65
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S E + GT Y+ PE
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE-----MANEFVGTRSYMSPERLQG 180
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 62
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 177
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++ G + + L +G E + ++ + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 235
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 236 YNKAVDWWALGVLIYEM 252
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 27/253 (10%)
Query: 423 VLRITNNFE--RVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYK-QFQAEVELLMR 477
V I+++F+ +LG G +G V G VA+K + P + + E+++L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 478 IHHKNLTTLVGYCD----EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA 533
H+N+ T+ E N I + + +L ++ + + + + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 534 KV-------HRDVKSTNILLSGKFQAKIADFGLSRTFP------VEGSGTHV-TTTIAGT 579
KV HRD+K +N+L++ K+ DFGL+R E +G T T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 580 PGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSVI---ERTHERIHITQWVSFMLGK 635
Y PE + S + + DV++ G +L E+ + + + H+ + I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 636 GDIESIVDPRLHE 648
D+ I PR E
Sbjct: 246 NDLRCIESPRARE 258
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 427 TNNFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGYK-QFQAEVELLMRIH- 479
T+ +E V +G G +GTVY G VA+K + P+ +G EV LL R+
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 480 --HKNLTTLVGYC-----DEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGR-- 525
H N+ L+ C D L++E + + +L+ L G A+ + R
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 526 ---LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
L VHRD+K NIL++ K+ADFGL+R + + + V T+ Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTL----WY 177
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
PE + + D+++ G + E+ K +
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS--------PSSAQGYKQFQAEVELLMRIHHKNL 483
+G G +GTV+ T VA+K + PSSA E+ LL + HKN+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL------REICLLKELKHKNI 63
Query: 484 TTLVGYCDEGTNRGLIYEFM----------ANGNLQALLLGEEADILSWEGRLRIAIEAA 533
L L++EF NG+L ++ ++ + L
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV--KSFLFQLLKGLGFCHSRN 121
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+K N+L++ + K+ADFGL+R F PV V T Y P+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL-----WYRPPDVLFGA 176
Query: 592 RLTEKS-DVYNFGVVLLEIITS 612
+L S D+++ G + E+ +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANA 198
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 83/213 (38%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 70 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPEYLAPEVLEDN 185
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 218
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V Y G ++AVK LS S K+ E+ LL + H+N+ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 490 CDEGT-----NRGLIYEFMANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAKVHR 537
T N + + +L + L + L ++ L+ A +HR
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR 178
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEK 596
D+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 179 DLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHYNMT 232
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG 636
D+++ G ++ E++T +++ T HI Q M G
Sbjct: 233 VDIWSVGCIMAELLTGRTLFPGTD---HINQLQQIMRLTG 269
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 89
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 204
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 88/220 (40%), Gaps = 27/220 (12%)
Query: 425 RIT-NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPSSAQGYKQFQ---AEVELLM 476
R+T N FE ++LG G FG V G A+K+L + E +L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 477 RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLR--------- 527
H LT L Y + +R ANG L E + S E R R
Sbjct: 207 NSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRER-VFS-EDRARFYGAEIVSA 263
Query: 528 ---IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
+ E V+RD+K N++L KI DFGL + +G+ T GTP YL
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKTFCGTPEYLA 320
Query: 585 PEYYISNRLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
PE N D + GVV+ E++ + + HE++
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 360
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 102/253 (40%), Gaps = 27/253 (10%)
Query: 423 VLRITNNFE--RVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYK-QFQAEVELLMR 477
V I+++F+ +LG G +G V G VA+K + P + + E+++L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 478 IHHKNLTTLVGYCD----EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA 533
H+N+ T+ E N I + + +L ++ + + + + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 534 KV-------HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT-------TIAGT 579
KV HRD+K +N+L++ K+ DFGL+R + T T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 580 PGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSVI---ERTHERIHITQWVSFMLGK 635
Y PE + S + + DV++ G +L E+ + + + H+ + I +
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245
Query: 636 GDIESIVDPRLHE 648
D+ I PR E
Sbjct: 246 NDLRCIESPRARE 258
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
V+RD+K N++L KI DFGL + +G+ T GTP YL PE N
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKTFCGTPEYLAPEVLEDNDYG 327
Query: 595 EKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HE++
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 357
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K NIL++ Q K+ADFGL+R + + + T V T+ Y PE + +
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL----WYRAPEVLLQSSYA 197
Query: 595 EKSDVYNFGVVLLEIITSK 613
D+++ G + E+ K
Sbjct: 198 TPVDLWSVGCIFAEMFRRK 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 21/194 (10%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQ-----FQAEVELLMRIHHKNLTTL 486
LG G F TVY T VA+K + K E++LL + H N+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGE---------EADILSWEGRLRIAIEAAKVHR 537
+ +N L+++FM +L+ ++ +A +L L + +HR
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+LL K+ADFGL+++F GS T Y PE R+
Sbjct: 137 DLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYXHQVVTRWYRAPELLFGARMYGVG 193
Query: 598 -DVYNFGVVLLEII 610
D++ G +L E++
Sbjct: 194 VDMWAVGCILAELL 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 83/213 (38%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPEYLAPEVLEDN 180
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 58/292 (19%)
Query: 424 LRITNNFER--VLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH 479
LR ++FE VLG G FG V LD A+K + + + +EV LL ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN 60
Query: 480 H-------------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL----LGEEADILSW 522
H +N + + + + E+ N L L+ L ++ D +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD--EY 118
Query: 523 EGRLRIAIEAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFP----------- 564
R +EA +HRD+K NI + KI DFGL++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 565 -VEGSGTHVTTTIAGTPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSVIERTHER 622
+ GS ++T+ I GT Y+ E + EK D+Y+ G++ E+I S ER
Sbjct: 179 NLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST---GMER 234
Query: 623 IHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRP 674
++I L K SI P DFD N + +I + KRP
Sbjct: 235 VNI-------LKKLRSVSIEFP---PDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 83/213 (38%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPEYLAPEVLEDN 180
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K NIL++ Q K+ADFGL+R + + + T V T+ Y PE + +
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL----WYRAPEVLLQSSYA 197
Query: 595 EKSDVYNFGVVLLEIITSK 613
D+++ G + E+ K
Sbjct: 198 TPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VHRD+K NIL++ Q K+ADFGL+R + + + T V T+ Y PE + +
Sbjct: 142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL----WYRAPEVLLQSSYA 197
Query: 595 EKSDVYNFGVVLLEIITSK 613
D+++ G + E+ K
Sbjct: 198 TPVDLWSVGCIFAEMFRRK 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 427 TNNFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGYK-QFQAEVELLMRIH- 479
T+ +E V +G G +GTVY G VA+K + P+ +G EV LL R+
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 480 --HKNLTTLVGYC-----DEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEGR-- 525
H N+ L+ C D L++E + + +L+ L G A+ + R
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 526 ---LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
L VHRD+K NIL++ K+ADFGL+R + + + V T+ Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL----WY 177
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
PE + + D+++ G + E+ K +
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 451 EVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509
E AVK++ S + E+E+L+R H N+ TL D+G + L+ E M G L
Sbjct: 54 EYAVKVIDKSK----RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 510 ALLL-------GEEADILSWEGR-LRIAIEAAKVHRDVKSTNILL---SGKFQA-KIADF 557
+L E + +L G+ + VHRD+K +NIL SG + +I DF
Sbjct: 110 DKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 558 GLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
G ++ E + T T ++ PE E D+++ G++L ++
Sbjct: 170 GFAKQLRAENG---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 83/213 (38%), Gaps = 21/213 (9%)
Query: 428 NNFE--RVLGNGGFGTV--YHGYLDGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHH 480
N+F+ ++LG G FG V G A+K+L + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA--IEAAK---- 534
LT L Y + +R ANG L E R A + A +
Sbjct: 65 PFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 535 ---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPEYLAPEVLEDN 180
Query: 592 RLTEKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HER+
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 59/278 (21%)
Query: 433 VLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH----H 480
+LG GGFGTV+ G+ D +VA+K++ + G+ EV LL ++ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--------LGEEADILSWEGRLRIAIEA 532
+ L+ + + T G + Q L LGE + G++ AI+
Sbjct: 98 PGVIRLLDWFE--TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS-RCFFGQVVAAIQH 154
Query: 533 AK----VHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTH--VTTTIAGTPGYLDP 585
VHRD+K NIL+ + AK+ DFG G+ H T GT Y P
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFG-------SGALLHDEPYTDFDGTRVYSPP 207
Query: 586 EYYISNRLTE-KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644
E+ ++ + V++ G++L +++ ER E I++
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------------------ILEA 248
Query: 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVME 682
LH F + + C++ + RP++ +++++
Sbjct: 249 ELH--FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + ++ DFG ++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 428 NNFE--RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQ---AEVELLMRIHH 480
++FE R +G G FG V + T+ A+K ++ + + E++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAIEAAK-- 534
L L + + ++ + + G+L+ L +E + + L +A++ +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K NILL I DF ++ P E TT+AGT Y+ PE + S +
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ----ITTMAGTKPYMAPEMFSSRK 190
Query: 593 LTEKS---DVYNFGVVLLEIITSK 613
S D ++ GV E++ +
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 427 TNNFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGYK-QFQAEVELLMRIH- 479
T+ +E V +G G +GTVY G VA+K + P+ +G EV LL R+
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 480 --HKNLTTLVGYC-----DEGTNRGLIYEFMANGNLQALL-------LGEEA--DILSWE 523
H N+ L+ C D L++E + + +L+ L L E D++
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 524 GR-LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
R L VHRD+K NIL++ K+ADFGL+R + + + V T+ Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL----WY 177
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVI 616
PE + + D+++ G + E+ K +
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 430 FERVLGNGGFGTVYHGYLDGTEV--AVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
E +G G +G V GT + A K + + +F+ E+E++ + H N+ L
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 488 GYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIEAA 533
++ T+ L+ E G L A ++ + +++ +L +A
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVA---- 128
Query: 534 KVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
HRD+K N L S K+ DFGL+ F G + T + GTP Y+ P+
Sbjct: 129 --HRDLKPENFLFLTDSPDSPLKLIDFGLAARF---KPGKMMRTKV-GTPYYVSPQ 178
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 484 TTLVGYC---DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----A 532
L +C DE GL Y NG L + +G +E + + A+E
Sbjct: 100 VKLY-FCFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 533 AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 215
Query: 593 LTEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 216 ACKSSDLWALGCIIYQLVA 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ FER+ LG G FG V G A+K+L K+ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E+ G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+++ + ++ DFGL++ V+G T + GTP YL PE +S
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAKR--VKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVK-MLSPSSAQGYK-QFQAEVELLMRIHHKNLTTLVGY 489
+G G FG V+ G +VA+K +L + +G+ E+++L + H+N+ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 490 CDEGT---NRG-----LIYEFMANGNLQALL--------LGEEADILSWEGRLRIAIEAA 533
C NR L+++F + +L LL L E ++ I
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 534 KV-HRDVKSTNILLSGKFQAKIADFGLSRTFPV-EGSGTHVTTTIAGTPGYLDPEYYISN 591
K+ HRD+K+ N+L++ K+ADFGL+R F + + S + T Y PE +
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 592 R-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634
R D++ G ++ E+ T +++ E+ H +S + G
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCG 247
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 451 EVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509
E AVK++ S + E+E+L+R H N+ TL D+G + L+ E M G L
Sbjct: 54 EYAVKVIDKSK----RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 510 ALLL-------GEEADILSWEGR-LRIAIEAAKVHRDVKSTNILL---SGKFQA-KIADF 557
+L E + +L G+ + VHRD+K +NIL SG + +I DF
Sbjct: 110 DKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 558 GLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEII 610
G ++ E + T T ++ PE E D+++ G++L ++
Sbjct: 170 GFAKQLRAENG---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 428 NNFERV--LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYK-QFQAEVELLMRIHHKN 482
++FE++ LG G G V+ G +A K++ + Q E+++L H N
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL---HECN 81
Query: 483 LTTLVGYCDEGTNRG---LIYEFMANGNLQALLLGEEADILSWEGRLRIAI--------E 531
+VG+ + G + E M G+L +L G++ IA+ E
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 532 AAKV-HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
K+ HRDVK +NIL++ + + K+ DFG+S + + GT Y+ PE
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DSMANSFVGTRSYMSPERLQG 196
Query: 591 NRLTEKSDVYNFGVVLLEIITSK 613
+ +SD+++ G+ L+E+ +
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP YL P +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEYLAPAIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 26/211 (12%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 490 ------CDEGTNRGLIYEFMA----NGNLQALLLGEEADILSWE--GRLRIAIEAAKVHR 537
+E + L+ M N A L + L ++ L+ A +HR
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHR 145
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEK 596
D+K +N+ ++ + KI DFGL+R E +G T Y PE ++ +
Sbjct: 146 DLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHYNQT 199
Query: 597 SDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
D+++ G ++ E++T +++ T HI Q
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTD---HIDQ 227
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 430 FERVLGNGGFGTVYHGYLDGTEV--AVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLV 487
E +G G +G V GT + A K + + +F+ E+E++ + H N+ L
Sbjct: 30 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 488 GYCDEGTNRGLIYEFMANGNL--------------QALLLGEEADILSWEGRLRIAIEAA 533
++ T+ L+ E G L A ++ + +++ +L +A
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVA---- 145
Query: 534 KVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
HRD+K N L S K+ DFGL+ F G + T + GTP Y+ P+
Sbjct: 146 --HRDLKPENFLFLTDSPDSPLKLIDFGLAARF---KPGKMMRTKV-GTPYYVSPQ 195
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGX------VATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVK-MLSPSSAQGYK-QFQAEVELLMRIHHKNLTTLVGY 489
+G G FG V+ G +VA+K +L + +G+ E+++L + H+N+ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 490 CDEGT---NRG-----LIYEFMANGNLQALL--------LGEEADILSWEGRLRIAIEAA 533
C NR L+++F + +L LL L E ++ I
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 534 KV-HRDVKSTNILLSGKFQAKIADFGLSRTFPV-EGSGTHVTTTIAGTPGYLDPEYYISN 591
K+ HRD+K+ N+L++ K+ADFGL+R F + + S + T Y PE +
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 592 R-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634
R D++ G ++ E+ T +++ E+ H +S + G
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCG 247
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVK-MLSPSSAQGYK-QFQAEVELLMRIHHKNLTTLVGY 489
+G G FG V+ G +VA+K +L + +G+ E+++L + H+N+ L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 490 CDEGT---NRG-----LIYEFMANGNLQALL--------LGEEADILSWEGRLRIAIEAA 533
C NR L+++F + +L LL L E ++ I
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143
Query: 534 KV-HRDVKSTNILLSGKFQAKIADFGLSRTFPV-EGSGTHVTTTIAGTPGYLDPEYYISN 591
K+ HRD+K+ N+L++ K+ADFGL+R F + + S + T Y PE +
Sbjct: 144 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 203
Query: 592 R-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634
R D++ G ++ E+ T +++ E+ H +S + G
Sbjct: 204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCG 246
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVK-MLSPSSAQGYK-QFQAEVELLMRIHHKNLTTLVGY 489
+G G FG V+ G +VA+K +L + +G+ E+++L + H+N+ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 490 CDEGT---NRG-----LIYEFMANGNLQALL--------LGEEADILSWEGRLRIAIEAA 533
C NR L+++F + +L LL L E ++ I
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 534 KV-HRDVKSTNILLSGKFQAKIADFGLSRTFPV-EGSGTHVTTTIAGTPGYLDPEYYISN 591
K+ HRD+K+ N+L++ K+ADFGL+R F + + S + T Y PE +
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 592 R-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634
R D++ G ++ E+ T +++ E+ H +S + G
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCG 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 420 YSNVLRITNNFE--RVLGNGGFGTVYHGYLDGT--EVAVKMLSPSSAQGYKQFQAEVELL 475
+ N ++ T+ +E +G G + T E AVK++ S + E+E+L
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEIL 69
Query: 476 MRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------ADILSWEGRL 526
+R H N+ TL D+G ++ E M G L +L ++ A + + +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 527 RIAIEAAKVHRDVKSTNILL---SGKFQA-KIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
VHRD+K +NIL SG ++ +I DFG ++ E + T T +
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG---LLMTPCYTANF 186
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ PE D+++ GV+L ++T
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLT 215
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 93
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG------YVATRWYRAPEIMLNWMHY 207
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 238
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 91
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 205
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 236
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG------FVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 93
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG------YVATRWYRAPEIMLNWMHY 207
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 238
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG------FVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYI-SNRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE + +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNAMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 93
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG------YVATRWYRAPEIMLNWMHY 207
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV---IGL 98
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 212
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 82
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG------FVATRWYRAPEIMLNWMHY 196
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 427 TNNFERV--LGNGGFGTVYHGY--LDGTEVAVKMLS-PSSAQGYKQFQ----AEVELLMR 477
T+ +E V +G G +GTVY G VA+K + P+ G EV LL R
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 478 IH---HKNLTTLVGYC-----DEGTNRGLIYEFMANGNLQALL-----LGEEADILSWEG 524
+ H N+ L+ C D L++E + + +L+ L G A+ +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 525 R-----LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGT 579
R L VHRD+K NIL++ K+ADFGL+R + + + T V T+
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTL--- 183
Query: 580 PGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSV 615
Y PE + + D+++ G + E+ K +
Sbjct: 184 -WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 83
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 197
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 198 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 83
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 197
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 198 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 93
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 207
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 208 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 91
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 205
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 236
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 88/215 (40%), Gaps = 45/215 (20%)
Query: 432 RVLGNGGFGTVYHG--YLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVG 488
RVL GGF VY G E A+K L + + + EV + ++ H N+ V
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI---VQ 90
Query: 489 YC----------DEGTNRGLIYEFMANGNLQALLLGEEA-DILSWEGRLRIAIEAAK--- 534
+C D G L+ + G L L E+ LS + L+I + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 535 ---------VHRDVKSTNILLSGKFQAKIADFGLSRT---FP-----------VEGSGTH 571
+HRD+K N+LLS + K+ DFG + T +P VE T
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVL 606
TT + TP +D Y + + EK D++ G +L
Sbjct: 211 NTTPMYRTPEIID--LYSNFPIGEKQDIWALGCIL 243
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 92
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 206
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 91
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 205
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 236
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 85
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 145
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 199
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 200 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 88
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 202
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
LG G + TVY G T+ VA+K + +G EV LL + H N+ TL
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 491 DEGTNRGLIYEFMAN---------GNL-----QALLLGEEADILSWEGRLRIAIEAAKVH 536
+ L++E++ GN+ L L + L++ R ++ +H
Sbjct: 70 HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV------LH 123
Query: 537 RDVKSTNILLSGKFQAKIADFGLSR--TFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
RD+K N+L++ + + K+ADFGL+R + P + V T P L S +
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL----LGSTDYS 179
Query: 595 EKSDVYNFGVVLLEIITSKSV 615
+ D++ G + E+ T + +
Sbjct: 180 TQIDMWGVGCIFYEMATGRPL 200
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 88
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 202
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 233
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 82
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 196
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 84
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 144
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 198
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 199 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 91
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 205
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 206 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 236
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 434 LGNGGFGTVYHGYLDGTE---VAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
LG+G FG V+ T VA + +P Y + E+ ++ ++HH L L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY-TVKNEISIMNQLHHPKLINLHDAF 117
Query: 491 DEGTNRGLIYEFMANGNLQALLLGE-----EADILSWEGRLRIAIEAAK-------VHRD 538
++ LI EF++ G L + E EA+++++ +R A E K VH D
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY---MRQACEGLKHMHEHSIVHLD 174
Query: 539 VKSTNILLSGKFQA--KIADFGLSRTF-PVEGSGTHVTTTIAGTPGYLDPE 586
+K NI+ K + KI DFGL+ P E T P +D E
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 88
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 202
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 233
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 98
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 212
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 98
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 212
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 213 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTF-----------PVEGSGTHVTTTIAGTPGYL 583
+HRD+K +NI + K+ DFGL P+ TH GT Y+
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKLYM 243
Query: 584 DPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHI 625
PE N + K D+++ G++L E++ S S ER+ I
Sbjct: 244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFST---QMERVRI 282
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 82
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 196
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 197 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 21/197 (10%)
Query: 428 NNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA---EVELLMRIHH 480
+ F+R+ LG G FG V G A+K+L KQ + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL--LGE--EADILSWEGRLRIAIEAAK-- 534
L L + +N ++ E++A G + + L +G E + ++ + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 535 --VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
++RD+K N+L+ + ++ DFG ++ V+G T + GTP L PE +S
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGR----TWXLCGTPEALAPEIILSKG 214
Query: 593 LTEKSDVYNFGVVLLEI 609
+ D + GV++ E+
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 429 NFE--RVLGNGGFGTVY-----HGYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMR 477
NFE +VLG G +G V+ G+ G A+K+L ++ A+ + + E ++L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 478 IHHKNLTTLVGYCDEG-TNRGLIYEFMANGNLQALLLGEEA----DILSWEGRLRIAIEA 532
I + Y + T LI +++ G L L E ++ + G + +A+E
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 533 AK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
++RD+K NILL + DFGLS+ F + T GT Y+ P+
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD--ETERAYDFCGTIEYMAPDIV 232
Query: 589 ISNR--LTEKSDVYNFGVVLLEIITSKS 614
+ D ++ GV++ E++T S
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGAS 260
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 97
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 211
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 212 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 242
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 96
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 156
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 210
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 211 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 241
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLDGT--EVAVKMLSP----SSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V GT E A K + SS +G ++ + EV +L I H N+ T
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D + + RIA
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + K+ DFG++ +G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---AGNEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 28/240 (11%)
Query: 419 SYSNVLRITNNFERV--LGNGGFGTVYHGY--LDGTEVAVKMLSPSS---AQGYKQFQAE 471
S+ + + +E + +GNG +G V L G +VA+K + P++ K+ E
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRE 104
Query: 472 VELLMRIHHKNLTTLVGYCDEGTNRG------LIYEFMANG------NLQALLLGEEADI 519
+++L H N+ + G ++ + M + + Q L L
Sbjct: 105 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 164
Query: 520 LSWEGR-LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSR---TFPVEGSGTHVTTT 575
L R L+ A +HRD+K +N+L++ + KI DFG++R T P E + T
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ--YFMTE 222
Query: 576 IAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634
T Y PE +S + T+ D+++ G + E++ + + +H Q + +LG
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP-GKNYVHQLQLIMMVLG 281
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 434 LGNGGFGTVYHGYLDGTE--VAVKMLS--------PSSAQGYKQFQAEVELLMRIHHKNL 483
+G G +GTV+ T VA+K + PSSA E+ LL + HKN+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL------REICLLKELKHKNI 63
Query: 484 TTLVGYCDEGTNRGLIYEFM----------ANGNLQALLLGEEADILSWEGRLRIAIEAA 533
L L++EF NG+L ++ ++ + L
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV--KSFLFQLLKGLGFCHSRN 121
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+K N+L++ + K+A+FGL+R F PV V T Y P+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL-----WYRPPDVLFGA 176
Query: 592 RLTEKS-DVYNFGVVLLEIITS 612
+L S D+++ G + E+ +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANA 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 97
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 211
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 212 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 242
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 109
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 223
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 224 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 254
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 105
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 219
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 220 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 250
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 106
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 220
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 251
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLDGT--EVAVKMLSP----SSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V GT E A K + SS +G ++ + EV +L I H N+ T
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D + + RIA
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIA-- 130
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + K+ DFG++ +G I GTP ++ PE
Sbjct: 131 ----HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---AGNEFKN-IFGTPEFVAPEI 182
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 183 VNYEPLGLEADMWSIGVI 200
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 88
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 202
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 203 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 92
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 206
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 92
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 206
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 237
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKXFCGTPEYLAPEVLEDNDYG 189
Query: 595 EKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HE++
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 106
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 220
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKXFCGTPEYLAPEVLEDNDYG 188
Query: 595 EKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HE++
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 109
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E G T Y PE ++
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG------YVATRWYRAPEIMLNWMHY 223
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 224 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 254
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 433 VLGNGGFGTVYH--GYLDGTEVAVKML-----SPSSAQGYKQFQAEVELLMRIHHKNLTT 485
V+G G F V G + AVK++ + S + + E + + H ++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQ-ALLLGEEADILSWEG----RLRIAIEAAK------ 534
L+ +++EFM +L ++ +A + E +R +EA +
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 535 -VHRDVKSTNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRDVK N+LL+ K + K+ DFG++ G V GTP ++ PE
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQL---GESGLVAGGRVGTPHFMAPEVVKR 207
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSVIERTHERI 623
+ DV+ GV+L +++ T ER+
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 431 ERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGY-----------KQFQAEVELLMRI 478
+R + +G +G V G +G VA+K + + + G K+ E+ LL
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 479 HHKNLTTL----VGYCDEGTNR-GLIYEFMANGNLQALLLGEEADILSWEG--------- 524
HH N+ L V + + ++ L+ E M Q ++ ++ ++S +
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ--VIHDQRIVISPQHIQYFMYHIL 144
Query: 525 -RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
L + EA VHRD+ NILL+ I DF L+R + + TH T Y
Sbjct: 145 LGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT----HRWYR 200
Query: 584 DPEYYISNR-LTEKSDVYNFGVVLLEIITSKSVIE 617
PE + + T+ D+++ G V+ E+ K++
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 92
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 206
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 207 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 237
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 422 NVLRITNNF--ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR 477
N+ N+F R++G GGFG VY G A+K L K Q E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMKQGET---LA 236
Query: 478 IHHKNLTTLV--GYC----------DEGTNRGLIYEFMANGNLQALL----LGEEADILS 521
++ + + +LV G C I + M G+L L + EAD+
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 522 WEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
+ + + +E V+RD+K NILL +I+D GL+ F + V
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----- 351
Query: 578 GTPGYLDPEYYISNRLTEKS-DVYNFGVVLLEIITSKS 614
GT GY+ PE + S D ++ G +L +++ S
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 422 NVLRITNNF--ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR 477
N+ N+F R++G GGFG VY G A+K L K Q E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMKQGET---LA 236
Query: 478 IHHKNLTTLV--GYC----------DEGTNRGLIYEFMANGNLQALL----LGEEADILS 521
++ + + +LV G C I + M G+L L + EAD+
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 522 WEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
+ + + +E V+RD+K NILL +I+D GL+ F + V
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----- 351
Query: 578 GTPGYLDPEYYISNRLTEKS-DVYNFGVVLLEIITSKS 614
GT GY+ PE + S D ++ G +L +++ S
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
V+RD+K N++L KI DFGL + +G+ GTP YL PE N
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---TMKXFCGTPEYLAPEVLEDNDYG 187
Query: 595 EKSDVYNFGVVLLEIITSK-SVIERTHERI 623
D + GVV+ E++ + + HE++
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 105
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E +G T Y PE ++
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 219
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 220 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 250
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 431 ERVLGNGGFGTVYHGY-LDGTEVAVKMLSPSSAQGY-----------KQFQAEVELLMRI 478
+R + +G +G V G +G VA+K + + + G K+ E+ LL
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 479 HHKNLTTL----VGYCDEGTNR-GLIYEFMANGNLQALLLGEEADILSWEG--------- 524
HH N+ L V + + ++ L+ E M Q ++ ++ ++S +
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ--VIHDQRIVISPQHIQYFMYHIL 144
Query: 525 -RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYL 583
L + EA VHRD+ NILL+ I DF L+R + + TH T Y
Sbjct: 145 LGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT----HRWYR 200
Query: 584 DPEYYISNR-LTEKSDVYNFGVVLLEIITSKSVIE 617
PE + + T+ D+++ G V+ E+ K++
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVG 488
+GNG +G V L G +VA+K + P++ K+ E+++L H N+ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 489 YCDEGTNRG------LIYEFMANG------NLQALLLGEEADILSWEGR-LRIAIEAAKV 535
G ++ + M + + Q L L L R L+ A +
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVI 180
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSR---TFPVEGSGTHVTTTIAGTPGYLDPEYYIS-N 591
HRD+K +N+L++ + KI DFG++R T P E + T T Y PE +S +
Sbjct: 181 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ--YFMTEYVATRWYRAPELMLSLH 238
Query: 592 RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634
T+ D+++ G + E++ + + + +H Q + +LG
Sbjct: 239 EYTQAIDLWSVGCIFGEMLARRQLFPGKN-YVHQLQLIMMVLG 280
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLDGT--EVAVKMLSP----SSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V GT E A K + SS +G ++ + EV +L I H N+ T
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D + + RIA
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIA-- 151
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + K+ DFG++ +G I GTP ++ PE
Sbjct: 152 ----HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---AGNEFKN-IFGTPEFVAPEI 203
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGAS 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 106
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL+R E G T Y PE ++
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX------VATRWYRAPEIMLNWMHY 220
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 221 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 251
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 422 NVLRITNNF--ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR 477
N+ N+F R++G GGFG VY G A+K L K Q E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMKQGET---LA 236
Query: 478 IHHKNLTTLV--GYC----------DEGTNRGLIYEFMANGNLQALL----LGEEADILS 521
++ + + +LV G C I + M G+L L + EAD+
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 522 WEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
+ + + +E V+RD+K NILL +I+D GL+ F + V
Sbjct: 297 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----- 351
Query: 578 GTPGYLDPEYYISNRLTEKS-DVYNFGVVLLEIITSKS 614
GT GY+ PE + S D ++ G +L +++ S
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 422 NVLRITNNF--ERVLGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR 477
N+ N+F R++G GGFG VY G A+K L K Q E +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMKQGET---LA 235
Query: 478 IHHKNLTTLV--GYC----------DEGTNRGLIYEFMANGNLQALL----LGEEADILS 521
++ + + +LV G C I + M G+L L + EAD+
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 522 WEGRLRIAIEAAK----VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577
+ + + +E V+RD+K NILL +I+D GL+ F + V
Sbjct: 296 YAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----- 350
Query: 578 GTPGYLDPEYYISNRLTEKS-DVYNFGVVLLEIITSKS 614
GT GY+ PE + S D ++ G +L +++ S
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +E + + A+E
Sbjct: 73 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 189
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 190 CKSSDLWALGCIIYQLVA 207
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DFGL R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI D+GL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQ-----FQAEVELLMRIHHKNLTTL 486
+V+G G FG V ++ M S + K+ F E +++ + + L
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG---EEADILSWEGRLRIAIEAAK----VHRDV 539
+ ++ E+M G+L L+ E + + +A++A +HRDV
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 200
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN----RLTE 595
K N+LL K+ADFG ++ +G T GTP Y+ PE S
Sbjct: 201 KPDNMLLDKHGHLKLADFGT--CMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGR 258
Query: 596 KSDVYNFGVVLLEIITSKS 614
+ D ++ GV L E++ +
Sbjct: 259 ECDWWSVGVFLFEMLVGDT 277
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +E + + A+E
Sbjct: 72 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 188
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 189 CKSSDLWALGCIIYQLVA 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 70 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 186
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 187 CKSSDLWALGCIIYQLVA 204
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 62/307 (20%)
Query: 433 VLGNGGFGTVYHGYLDGTEVAVKM--LSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC 490
++G G FG VYHG G EVA+++ + + K F+ EV + H+N+ +G C
Sbjct: 40 LIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVK 540
+ +I L +++ + +L +IA E K +H+D+K
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKI-VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK 157
Query: 541 STNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA--GTPGYLDPEYYISNRL----- 593
S N+ + I DFGL V +G G +L PE I +L
Sbjct: 158 SKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE--IIRQLSPDTE 214
Query: 594 ------TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW---------VSFMLGKGDI 638
++ SDV+ G + E +H +W + + +G G
Sbjct: 215 EDKLPFSKHSDVFALGTIWYE--------------LHAREWPFKTQPAEAIIWQMGTG-- 258
Query: 639 ESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETARLKAAG 698
+ P L + I + +I + C + +RPT + +M++ E L RL G
Sbjct: 259 ---MKPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTK-LMDMLEKLPKRNRRLSHPG 311
Query: 699 KEYESKD 705
++S +
Sbjct: 312 HFWKSAE 318
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALLLG----EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +E + + A+E
Sbjct: 71 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 187
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 188 CKSSDLWALGCIIYQLVA 205
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 92 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + + GT Y+ PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 208
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 209 CKSSDLWALGCIIYQLVA 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 48/222 (21%)
Query: 431 ERVLGNGGFGTV-YHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVG 488
E++LG G GTV + G G VAVK + E++LL H N+
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRY-- 74
Query: 489 YCDEGTNRGLIYEF-MANGNLQALL-----------LGEEADILSWEGRLRIAIEAAK-- 534
YC E T+R L + N NLQ L+ L +E + +S ++ +
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 535 --VHRDVKSTNILL--SGKFQAK-----------IADFGLSRTFPVEGSGTHVTTTI--- 576
+HRD+K NIL+ S +F A I+DFGL + ++ + T +
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK--LDSGQSSFRTNLNNP 192
Query: 577 AGTPGYLDPEYY-------ISNRLTEKSDVYNFGVVLLEIIT 611
+GT G+ PE RLT D+++ G V I++
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP-GYLDPEYYISNRL 593
+HRD+ + NILLS KI DFGL+R + + +V P ++ PE
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARD--IYKNPDYVRKGDTRLPLKWMAPESIFDKIY 278
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ KSDV+++GV+L EI +
Sbjct: 279 STKSDVWSYGVLLWEIFS 296
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRD+K NILL+ +I DFG ++ E + + GT Y+ PE +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSAS 212
Query: 595 EKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 484 TTL--VGYCDEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 96 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + + GT Y+ PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 212
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 213 CKSSDLWALGCIIYQLVA 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 432 RVLGNGGFGTVYHGYLDG---TEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTL 486
R +G+G +G+V Y D +VAVK LS S ++ E+ LL + H+N+
Sbjct: 26 RPVGSGAYGSVCSAY-DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV--- 81
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR---------------LRIAIE 531
+G D T I +F + L+ + +I+ + L+
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS- 590
A +HRD+K +N+ ++ + +I DFGL+R E +G T Y PE ++
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTG------YVATRWYRAPEIMLNW 195
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSV 615
+ D+++ G ++ E++ K++
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKAL 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ + I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPAFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 189 VNYEPLGLEADMWSIGVI 206
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 535 VHRDVKSTNILLS--GKFQAKIADFGLSRTFPVEGSGTHV-TTTIAGTPGYLDPEYYISN 591
HRD+K N L S F+ K+ DFGLS+ F +G + TT AGTP ++ PE + N
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE--VLN 247
Query: 592 RLTE----KSDVYNFGVVL 606
E K D ++ GV+L
Sbjct: 248 TTNESYGPKCDAWSAGVLL 266
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 77 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 193
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 194 CKSSDLWALGCIIYQLVA 211
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 471 EVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNL-----QALLLGEEADILSWEG 524
EV++L ++ H N+ L + T L+++ M G L + + L E+
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 525 RLRIAIEAAK---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG 581
L + K VHRD+K NILL K+ DFG F + ++ GTP
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLRSVCGTPS 188
Query: 582 YLDPE 586
YL PE
Sbjct: 189 YLAPE 193
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 498 LIYEFMANGNL------QALLLGEEADILSWEGRLRIAI--EAAKVHRDVKSTNILLSGK 549
+ E++ G+L Q L E A S E L + E ++RD+K N+LL +
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 550 FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEI 609
K+ D+G+ + G T+T GTP Y+ PE D + GV++ E+
Sbjct: 190 GHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 610 ITSKS 614
+ +S
Sbjct: 247 MAGRS 251
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 76/184 (41%), Gaps = 40/184 (21%)
Query: 433 VLGNGGFGTVYHGYLD--GTEVAVKM------LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+LG G V+ G G A+K+ L P Q E E+L +++HKN+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-----MREFEVLKKLNHKNIV 70
Query: 485 TLVGYCDEGTNRG--LIYEFMANGNLQALL--------LGEEA------DILSWEGRLRI 528
L +E T R LI EF G+L +L L E D++ LR
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR- 129
Query: 529 AIEAAKVHRDVKSTNILL----SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
E VHR++K NI+ G+ K+ DFG +R E ++ GT YL
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR----ELEDDEQFVSLYGTEEYLH 183
Query: 585 PEYY 588
P+ Y
Sbjct: 184 PDMY 187
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 484 TTL--VGYCDEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 93 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYVSPELLTEKSA 209
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQ-----FQAEVELLMRIHHKNLTTL 486
+V+G G FG V T M S + K+ F E +++ + + L
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG---EEADILSWEGRLRIAIEAAK----VHRDV 539
+ ++ E+M G+L L+ E + + +A++A +HRDV
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 194
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN----RLTE 595
K N+LL K+ADFG EG T GTP Y+ PE S
Sbjct: 195 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--CDTAVGTPDYISPEVLKSQGGDGYYGR 252
Query: 596 KSDVYNFGVVLLEIITSKS 614
+ D ++ GV L E++ +
Sbjct: 253 ECDWWSVGVFLYEMLVGDT 271
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQ-----FQAEVELLMRIHHKNLTTL 486
+V+G G FG V T M S + K+ F E +++ + + L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG---EEADILSWEGRLRIAIEAAK----VHRDV 539
+ ++ E+M G+L L+ E + + +A++A +HRDV
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 199
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN----RLTE 595
K N+LL K+ADFG EG T GTP Y+ PE S
Sbjct: 200 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--CDTAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 596 KSDVYNFGVVLLEIITSKS 614
+ D ++ GV L E++ +
Sbjct: 258 ECDWWSVGVFLYEMLVGDT 276
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 93 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 92 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 208
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 209 CKSSDLWALGCIIYQLVA 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 484 TTL--VGYCDEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 93 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 210 CKSSDLWALGCIIYQLVA 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 95 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 96 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 212
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 213 CKSSDLWALGCIIYQLVA 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 464 GYKQFQAEVELLMRIHHKNLTTLVG--YCDEGTNRGLIYEFMANGNLQAL--LLGEEADI 519
G + E++LL R+ HKN+ LV Y +E ++ E+ G + L + + +
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 520 LSWEGRLRIAIEAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTF-PVEGSGTH 571
G I+ + VH+D+K N+LL+ KI+ G++ P T
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 572 VTTTIAGTPGYLDPEYYISNRLTE----KSDVYNFGVVLLEIITS 612
T+ G+P + PE I+N L K D+++ GV L I T
Sbjct: 169 RTSQ--GSPAFQPPE--IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 95 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQ-----FQAEVELLMRIHHKNLTTL 486
+V+G G FG V T M S + K+ F E +++ + + L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 487 VGYCDEGTNRGLIYEFMANGNLQALLLG---EEADILSWEGRLRIAIEAAK----VHRDV 539
+ ++ E+M G+L L+ E + + +A++A +HRDV
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 199
Query: 540 KSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN----RLTE 595
K N+LL K+ADFG EG T GTP Y+ PE S
Sbjct: 200 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVR--CDTAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 596 KSDVYNFGVVLLEIITSKS 614
+ D ++ GV L E++ +
Sbjct: 258 ECDWWSVGVFLYEMLVGDT 276
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 434 LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G FG V+ G A K + + + E++ + + H L L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ +IYEFM+ G L + +E + +S + + + K VH D+K
Sbjct: 119 DDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 177
Query: 542 TNILLSGKF--QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
NI+ + K + K+ DFGL+ + S VTT GT + PE + +D+
Sbjct: 178 ENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT---GTAEFAAPEVAEGKPVGYYTDM 233
Query: 600 YNFGVV 605
++ GV+
Sbjct: 234 WSVGVL 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 98 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 214
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 215 CKSSDLWALGCIIYQLVA 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
VH DVK NI L + + K+ DFGL G+G G P Y+ PE +
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG----EVQEGDPRYMAPE-LLQGSYG 233
Query: 595 EKSDVYNFGVVLLEI 609
+DV++ G+ +LE+
Sbjct: 234 TAADVFSLGLTILEV 248
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 434 LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491
LG G FG V+ G A K + + + E++ + + H L L +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 492 EGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKS 541
+ +IYEFM+ G L + +E + +S + + + K VH D+K
Sbjct: 225 DDNEMVMIYEFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKP 283
Query: 542 TNILLSGKF--QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
NI+ + K + K+ DFGL+ + S VTT GT + PE + +D+
Sbjct: 284 ENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT---GTAEFAAPEVAEGKPVGYYTDM 339
Query: 600 YNFGVV 605
++ GV+
Sbjct: 340 WSVGVL 345
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSAC 210
Query: 595 EKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 211 KSSDLWALGCIIYQLVA 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 40/202 (19%)
Query: 429 NFERVLGNGGFGT--VYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTL 486
+F + +G+G FG + L VAVK + +A + Q E+ + H N+
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRF 81
Query: 487 VGYCDEGTNRGLIYEFMANGNL-------------------QALLLGEEADILSWEGRLR 527
T+ +I E+ + G L Q LL G +S+ ++
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG-----VSYCHSMQ 136
Query: 528 IAIEAAKVHRDVKSTNILLSGK--FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDP 585
I HRD+K N LL G + KI DFG S++ + + GTP Y+ P
Sbjct: 137 IC------HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAP 186
Query: 586 EYYISNRLTEK-SDVYNFGVVL 606
E + K +DV++ GV L
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTL 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 429 NFERVLGNGGFGTVYHGYLDGT--EVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNL 483
F ++LG G F TV T E A+K+L E +++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 484 TTLVGYC--DEGTNRGLIYEFMANGNLQALL--LG--EEADILSWEGRLRIAIE----AA 533
L DE GL Y NG L + +G +E + + A+E
Sbjct: 95 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 534 KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 594 TEKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 212 CKSSDLWALGCIIYQLVA 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 471 EVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNL-----QALLLGEEADILSWEG 524
EV++L ++ H N+ L + T L+++ M G L + + L E+
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 525 RLRIAIEAAK---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG 581
L + K VHRD+K NILL K+ DFG F + + GTP
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLREVCGTPS 175
Query: 582 YLDPE 586
YL PE
Sbjct: 176 YLAPE 180
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 18/201 (8%)
Query: 426 ITNNFERV--LGNGGFGTVY--HGYLDGTEVAVKMLSPSSAQGYKQFQA--EVELLMRIH 479
+ +E++ +G G +G V+ G VA+K S + A E+ +L ++
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 480 HKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEA------DILSWE--GRLRIAIE 531
H NL L+ L++E+ + L L + ++W+ + +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRDVK NIL++ K+ DFG +R + G + +A T Y PE + +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARL--LTGPSDYYDDEVA-TRWYRSPELLVGD 177
Query: 592 -RLTEKSDVYNFGVVLLEIIT 611
+ DV+ G V E+++
Sbjct: 178 TQYGPPVDVWAIGCVFAELLS 198
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ + I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 189 VNYEPLGLEADMWSIGVI 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSAC 212
Query: 595 EKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 46/219 (21%)
Query: 431 ERVLGNGGFGTV-YHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVG 488
E++LG G GTV + G G VAVK + E++LL H N+
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRY-- 92
Query: 489 YCDEGTNRGLIYEF-MANGNLQALL-----------LGEEADILSWEGRLRIAIEAAK-- 534
YC E T+R L + N NLQ L+ L +E + +S ++ +
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 535 --VHRDVKSTNILL--SGKFQAK-----------IADFGLSRTFPVEGSGTHV----TTT 575
+HRD+K NIL+ S +F A I+DFGL + SG
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRXNLNN 209
Query: 576 IAGTPGYLDPEYY---ISNRLTEKSDVYNFGVVLLEIIT 611
+GT G+ PE RLT D+++ G V I++
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 135
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 136 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 187
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 420 YSNVLRITNNFE--RVLGNGGFGTVYHGYLDGT--EVAVKMLSPSSAQGYKQFQAEVELL 475
+ N ++ T+ +E +G G + T E AVK++ S + E+E+L
Sbjct: 14 HRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK----RDPTEEIEIL 69
Query: 476 MRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEE--------ADILSWEGRL 526
+R H N+ TL D+G ++ E G L +L ++ A + + +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 527 RIAIEAAKVHRDVKSTNILL---SGKFQA-KIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
VHRD+K +NIL SG ++ +I DFG ++ E + T T +
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG---LLXTPCYTANF 186
Query: 583 LDPEYYISNRLTEKSDVYNFGVVLLEIIT 611
+ PE D+++ GV+L +T
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLT 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 135
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 136 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 187
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 46/219 (21%)
Query: 431 ERVLGNGGFGTV-YHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVG 488
E++LG G GTV + G G VAVK + E++LL H N+
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRY-- 92
Query: 489 YCDEGTNRGLIYEF-MANGNLQALL-----------LGEEADILSWEGRLRIAIEAAK-- 534
YC E T+R L + N NLQ L+ L +E + +S ++ +
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 535 --VHRDVKSTNILL--SGKFQAK-----------IADFGLSRTFPVEGSGTHV----TTT 575
+HRD+K NIL+ S +F A I+DFGL + SG
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRXNLNN 209
Query: 576 IAGTPGYLDPEYY---ISNRLTEKSDVYNFGVVLLEIIT 611
+GT G+ PE RLT D+++ G V I++
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 471 EVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNL-----QALLLGEEADILSWEG 524
EV++L ++ H N+ L + T L+++ M G L + + L E+
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 525 RLRIAIEAAK---VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG 581
L + K VHRD+K NILL K+ DFG F + + GTP
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLREVCGTPS 188
Query: 582 YLDPE 586
YL PE
Sbjct: 189 YLAPE 193
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 111/292 (38%), Gaps = 58/292 (19%)
Query: 424 LRITNNFER--VLGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH 479
LR ++FE VLG G FG V LD A+K + + + +EV LL ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLN 60
Query: 480 H-------------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALL----LGEEADILSW 522
H +N + + + E+ N L L+ L ++ D +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD--EY 118
Query: 523 EGRLRIAIEAAK-------VHRDVKSTNILLSGKFQAKIADFGLSRTFP----------- 564
R +EA +HR++K NI + KI DFGL++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 565 -VEGSGTHVTTTIAGTPGYLDPEYYI-SNRLTEKSDVYNFGVVLLEIITSKSVIERTHER 622
+ GS ++T+ I GT Y+ E + EK D Y+ G++ E I S ER
Sbjct: 179 NLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST---GXER 234
Query: 623 IHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRP 674
++I L K SI P DFD N +I + KRP
Sbjct: 235 VNI-------LKKLRSVSIEFP---PDFDDNKXKVEKKIIRLLIDHDPNKRP 276
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 432 RVLGNGGFGTVYHGYLDG---TEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTL 486
R +G+G +G+V Y D +VAVK LS S ++ E+ LL + H+N+
Sbjct: 34 RPVGSGAYGSVCSAY-DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV--- 89
Query: 487 VGYCDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIE 531
+G D T I +F + +L + L E L ++ L+
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS- 590
A +HRD+K +N+ ++ + +I DFGL+R E +G T Y PE ++
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG------YVATRWYRAPEIMLNW 203
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSV 615
+ D+++ G ++ E++ K++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 432 RVLGNGGFGTVYHGYLDG---TEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTL 486
R +G+G +G+V Y D +VAVK LS S ++ E+ LL + H+N+
Sbjct: 34 RPVGSGAYGSVCSAY-DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV--- 89
Query: 487 VGYCDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIE 531
+G D T I +F + +L + L E L ++ L+
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS- 590
A +HRD+K +N+ ++ + +I DFGL+R E +G T Y PE ++
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG------YVATRWYRAPEIMLNW 203
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSV 615
+ D+++ G ++ E++ K++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKAL 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRD+K NILL+ +I DFG ++ E + GT Y+ PE
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSAX 212
Query: 595 EKSDVYNFGVVLLEIIT 611
+ SD++ G ++ +++
Sbjct: 213 KSSDLWALGCIIYQLVA 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI FGL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRDVK +NILL + Q K+ DFG+S + + AG Y+ PE T
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS----AGCAAYMAPERIDPPDPT 202
Query: 595 E-----KSDVYNFGVVLLEIITSK 613
+ ++DV++ G+ L+E+ T +
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 434 LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLM--RIHHKNLTTLVGY 489
LG G FG V+ G + AVK + + F+AE EL+ + + L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAE-ELMACAGLTSPRIVPLYGA 153
Query: 490 CDEGTNRGLIYEFMANGNLQALL--------------LGEEADILSWEGRLRIAIEAAKV 535
EG + E + G+L L+ LG+ + L + RI +
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI------L 207
Query: 536 HRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNR 592
H DVK+ N+LLS A + DFG + +G G + T I GT ++ PE +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 593 LTEKSDVYNFGVVLLEII 610
K DV++ ++L ++
Sbjct: 268 CDAKVDVWSSCCMMLHML 285
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 75/186 (40%), Gaps = 44/186 (23%)
Query: 433 VLGNGGFGTVYHGYLD--GTEVAVKM------LSPSSAQGYKQFQAEVELLMRIHHKNLT 484
+LG G V+ G G A+K+ L P Q E E+L +++HKN+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-----MREFEVLKKLNHKNIV 70
Query: 485 TLVGYCDEGTNRG--LIYEFMANGNLQALLLGEE----------------ADILSWEGRL 526
L +E T R LI EF G+L +L EE D++ L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 527 RIAIEAAKVHRDVKSTNILL----SGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY 582
R E VHR++K NI+ G+ K+ DFG +R E + GT Y
Sbjct: 129 R---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR----ELEDDEQFVXLYGTEEY 181
Query: 583 LDPEYY 588
L P+ Y
Sbjct: 182 LHPDMY 187
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI D GL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 189 VNYEPLGLEADMWSIGVI 206
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI D GL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI DF L+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRDVK +N+L++ Q K+ DFG+S + T AG Y+ PE I+ L
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDAGCKPYMAPE-RINPELN 230
Query: 595 E-----KSDVYNFGVVLLEI 609
+ KSD+++ G+ ++E+
Sbjct: 231 QKGYSVKSDIWSLGITMIEL 250
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 426 ITNNFE---RVLGNGGFGTVYHGY--LDGTEVAVKML--SPSSAQ---------GYKQFQ 469
+T++++ +VLG G G V + G + A+K+L SP + Q G
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIV 66
Query: 470 AEVELLMRIHH-KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI 528
+++ +HH K ++ C EG G ++ + QA E A+I+ G
Sbjct: 67 CILDVYENMHHGKRCLLIIMECMEG---GELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 529 AIEAAKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
+ + + HRDVK N+L + K + K+ DFG ++ + + T TP Y+
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-----TTQNALQTPCYTPYYVA 178
Query: 585 PEYYISNRLTEKSDVYNFGVVL 606
PE + + D+++ GV++
Sbjct: 179 PEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 434 LGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLM--RIHHKNLTTLVGY 489
LG G FG V+ G + AVK + + F+AE EL+ + + L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAE-ELMACAGLTSPRIVPLYGA 134
Query: 490 CDEGTNRGLIYEFMANGNLQALL--------------LGEEADILSWEGRLRIAIEAAKV 535
EG + E + G+L L+ LG+ + L + RI +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI------L 188
Query: 536 HRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISNR 592
H DVK+ N+LLS A + DFG + +G G + T I GT ++ PE +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 593 LTEKSDVYNFGVVLLEII 610
K DV++ ++L ++
Sbjct: 249 CDAKVDVWSSCCMMLHML 266
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 434 LGNGGFGTVYHGYLD-GTEVAVKMLS-PSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G VY + G A+K + +G E+ +L + H N+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR---------LRIAIEAAKVHRDVKS 541
L++E + + +L+ LL E + S + + + +HRD+K
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 542 TNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
N+L++ + + KIADFGL+R F PV V T P L S + + D+
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL----MGSKKYSTTIDI 184
Query: 600 YNFGVVLLEII 610
++ G + E++
Sbjct: 185 WSVGCIFAEMV 195
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 434 LGNGGFGTVYHGYLD-GTEVAVKMLS-PSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G VY + G A+K + +G E+ +L + H N+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR---------LRIAIEAAKVHRDVKS 541
L++E + + +L+ LL E + S + + + +HRD+K
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 542 TNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
N+L++ + + KIADFGL+R F PV V T P L S + + D+
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL----MGSKKYSTTIDI 184
Query: 600 YNFGVVLLEII 610
++ G + E++
Sbjct: 185 WSVGCIFAEMV 195
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 426 ITNNFE---RVLGNGGFGTVYHGY--LDGTEVAVKML--SPSSAQ---------GYKQFQ 469
+T++++ +VLG G G V + G + A+K+L SP + Q G
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIV 85
Query: 470 AEVELLMRIHH-KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRI 528
+++ +HH K ++ C EG G ++ + QA E A+I+ G
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEG---GELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 529 AIEAAKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLD 584
+ + + HRDVK N+L + K + K+ DFG ++ + + T TP Y+
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE-----TTQNALQTPCYTPYYVA 197
Query: 585 PEYYISNRLTEKSDVYNFGVVL 606
PE + + D+++ GV++
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTTL 486
RV+G G + V L T+ A+K++ + + Q E + + +
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 487 VGYCDEGTNR-GLIYEFMANGNL------QALLLGEEADILSWEGRLRIAI--EAAKVHR 537
+ C + +R + E++ G+L Q L E A S E L + E ++R
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 130
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+LL + K+ D+G+ + G T+ GTP Y+ PE
Sbjct: 131 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGEDYGFSV 187
Query: 598 DVYNFGVVLLEIITSKS 614
D + GV++ E++ +S
Sbjct: 188 DWWALGVLMFEMMAGRS 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTTL 486
RV+G G + V L T+ A+K++ + + Q E + + +
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 487 VGYCDEGTNR-GLIYEFMANGNL------QALLLGEEADILSWEGRLRIAI--EAAKVHR 537
+ C + +R + E++ G+L Q L E A S E L + E ++R
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+LL + K+ D+G+ + G T+ GTP Y+ PE
Sbjct: 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGEDYGFSV 191
Query: 598 DVYNFGVVLLEIITSKS 614
D + GV++ E++ +S
Sbjct: 192 DWWALGVLMFEMMAGRS 208
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 50/223 (22%)
Query: 431 ERVLGNGGFGTV-YHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVG 488
E++LG G GTV + G G VAVK + E++LL H N+
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRY-- 74
Query: 489 YCDEGTNRGLIYEF-MANGNLQALL-----------LGEEADILSWEGRLRIAIEAAK-- 534
YC E T+R L + N NLQ L+ L +E + +S ++ +
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 535 --VHRDVKSTNILL--SGKFQAK-----------IADFGLSRTFPVEGSGTHV----TTT 575
+HRD+K NIL+ S +F A I+DFGL + SG
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL---DSGQXXFRXNLNN 191
Query: 576 IAGTPGYLDPEYY-------ISNRLTEKSDVYNFGVVLLEIIT 611
+GT G+ PE RLT D+++ G V I++
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTLVGY 489
+G+G +G+V + G VAVK LS S K+ E+ LL + H+N+ +G
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGL 86
Query: 490 CDEGTNRGLIYEF--------MANGNLQAL-----LLGEEADILSWE--GRLRIAIEAAK 534
D T + EF + +L + L + L ++ L+ A
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRL 593
+HRD+K +N+ ++ + KI D GL+R E +G T Y PE ++
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTG------YVATRWYRAPEIMLNWMHY 200
Query: 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQ 627
+ D+++ G ++ E++T +++ T HI Q
Sbjct: 201 NQTVDIWSVGCIMAELLTGRTLFPGTD---HIDQ 231
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 434 LGNGGFGTVYHGYLD-GTEVAVKMLS-PSSAQGYKQFQ-AEVELLMRIHHKNLTTLVGYC 490
+G G +G VY + G A+K + +G E+ +L + H N+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGR---------LRIAIEAAKVHRDVKS 541
L++E + + +L+ LL E + S + + + +HRD+K
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKP 128
Query: 542 TNILLSGKFQAKIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV 599
N+L++ + + KIADFGL+R F PV + T P L S + + D+
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL----MGSKKYSTTIDI 184
Query: 600 YNFGVVLLEII 610
++ G + E++
Sbjct: 185 WSVGCIFAEMV 195
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTEL-----N 328
P + LNL + I+G I + L + ILDLS+N L G +P +S L LTE+ N
Sbjct: 653 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 712
Query: 329 LKGTIP 334
L G IP
Sbjct: 713 LSGPIP 718
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 272 DPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDF-LSQLPFLT--ELN 328
D + L++S + ++GD + IST T +++L++S+N GP+P L L +L+ E
Sbjct: 218 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENK 277
Query: 329 LKGTIPNGLIEKQKNGLLSLSVEGN 353
G IP+ + + L L + GN
Sbjct: 278 FTGEIPD-FLSGACDTLTGLDLSGN 301
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 279 LNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL-----KGTI 333
++LS++ + G+I +I L ++ IL LSNN+ +G +P L L L+L GTI
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 334 PNGLIEK 340
P + ++
Sbjct: 552 PAAMFKQ 558
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 280 NLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL-----KGTIP 334
N++S G +P S+ LD+S N L+G +P + +P+L LNL G+IP
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 335 NGLIEKQKNGLLSLS 349
+ + + + +L LS
Sbjct: 671 DEVGDLRGLNILDLS 685
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 276 ITSLNLSSSGIAGDIAPYIST--LTSIQILDLSNNNLTGPVPDFLSQLPFLTELN----- 328
+ +L+LSS+ +G I P + ++Q L L NN TG +P LS L L+
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 329 LKGTIPNGL 337
L GTIP+ L
Sbjct: 427 LSGTIPSSL 435
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 286 IAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL-----KGTIP 334
+ G+I +S T++ + LSNN LTG +P ++ +L L L L G IP
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGYKQ--FQAEVELLMRIHHKNLTT 485
LG+G F V G + A K + + SS +G + + EV +L I H N+ T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA-----------DILS---WEGRLRIAIE 531
L + T+ LI E +A G L L +E+ IL+ + L+IA
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIA-- 136
Query: 532 AAKVHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K + KI DFGL+ I GTP ++ PE
Sbjct: 137 ----HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEI 188
Query: 588 YISNRLTEKSDVYNFGVVLLEIITSKS 614
L ++D+++ GV+ +++ S
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRDVK +N+L++ Q K+ DFG+S + V+ + AG Y+ PE I+ L
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGIS-GYLVDDVAKDID---AGCKPYMAPE-RINPELN 186
Query: 595 E-----KSDVYNFGVVLLEI 609
+ KSD+++ G+ ++E+
Sbjct: 187 QKGYSVKSDIWSLGITMIEL 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSP---SSAQGYKQFQAEVELLMRIHHKNLTTL 486
RV+G G + V L T+ A+K++ + + Q E + + +
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 487 VGYCDEGTNR-GLIYEFMANGNL------QALLLGEEADILSWEGRLRIAI--EAAKVHR 537
+ C + +R + E++ G+L Q L E A S E L + E ++R
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 145
Query: 538 DVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKS 597
D+K N+LL + K+ D+G+ + G T+ GTP Y+ PE
Sbjct: 146 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGEDYGFSV 202
Query: 598 DVYNFGVVLLEIITSKS 614
D + GV++ E++ +S
Sbjct: 203 DWWALGVLMFEMMAGRS 219
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 498 LIYEFMANGNLQALL--LGEE--ADILS-WEGRLRIAIEAAK----VHRDVKSTNILLSG 548
L+ E+ G+L LL GE A++ + + +AI++ VHRD+K NILL
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197
Query: 549 KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPE 586
++ADFG + GT + GTP YL PE
Sbjct: 198 CGHIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSPE 233
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V G E A K + S +S +G ++ + EV +L ++ H N+ T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D +++ +IA
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K K+ DFGL+ G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V G E A K + S +S +G ++ + EV +L ++ H N+ T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D +++ +IA
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K K+ DFGL+ G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTEL-----N 328
P + LNL + I+G I + L + ILDLS+N L G +P +S L LTE+ N
Sbjct: 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715
Query: 329 LKGTIP 334
L G IP
Sbjct: 716 LSGPIP 721
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 272 DPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDF-LSQLPFLT--ELN 328
D + L++S + ++GD + IST T +++L++S+N GP+P L L +L+ E
Sbjct: 221 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENK 280
Query: 329 LKGTIPNGLIEKQKNGLLSLSVEGN 353
G IP+ + + L L + GN
Sbjct: 281 FTGEIPD-FLSGACDTLTGLDLSGN 304
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 279 LNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL-----KGTI 333
++LS++ + G+I +I L ++ IL LSNN+ +G +P L L L+L GTI
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 334 PNGLIEKQ 341
P + ++
Sbjct: 555 PAAMFKQS 562
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 280 NLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL-----KGTIP 334
N++S G +P S+ LD+S N L+G +P + +P+L LNL G+IP
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 335 NGLIEKQKNGLLSLS 349
+ + + + +L LS
Sbjct: 674 DEVGDLRGLNILDLS 688
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 276 ITSLNLSSSGIAGDIAPYIST--LTSIQILDLSNNNLTGPVPDFLSQLPFLTELN----- 328
+ +L+LSS+ +G I P + ++Q L L NN TG +P LS L L+
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 329 LKGTIPNGL 337
L GTIP+ L
Sbjct: 430 LSGTIPSSL 438
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 286 IAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL-----KGTIP 334
+ G+I +S T++ + LSNN LTG +P ++ +L L L L G IP
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V G E A K + S +S +G ++ + EV +L ++ H N+ T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D +++ +IA
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K K+ DFGL+ G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V G E A K + S +S +G ++ + EV +L ++ H N+ T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D +++ +IA
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K K+ DFGL+ G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V G E A K + S +S +G ++ + EV +L ++ H N+ T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D +++ +IA
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K K+ DFGL+ G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 434 LGNGGFGTVYHGYLD--GTEVAVKML----SPSSAQGY--KQFQAEVELLMRIHHKNLTT 485
LG+G F V G E A K + S +S +G ++ + EV +L ++ H N+ T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIE 531
L + T+ LI E ++ G L L +E+ D +++ +IA
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIA-- 137
Query: 532 AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEY 587
H D+K NI+L K K+ DFGL+ G I GTP ++ PE
Sbjct: 138 ----HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---DGVEFKN-IFGTPEFVAPEI 189
Query: 588 YISNRLTEKSDVYNFGVV 605
L ++D+++ GV+
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 535 VHRDVKSTNILLSGK---FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
VHRD+K N+L + + + KI DFG +R P + T T Y PE N
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL---KTPCFTLHYAAPELLNQN 184
Query: 592 RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM--LGKGDI 638
E D+++ GV+L +++ + + + T V M + KGD
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRD+K +NILL K+ DFG+S + T AG Y+ PE +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQL----VDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 595 E----KSDVYNFGVVLLEIITSKSVIERTHERI-HITQWVSFMLGKGDIESIVDPRLHED 649
+ +SDV++ G+ L E+ T + + + +TQ V KGD P+L
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-----KGD-----PPQLSNS 253
Query: 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVME----LNESLAIETA 692
+ + C+++ +KRP +++ + E A+E A
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVA 300
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 535 VHRDVKSTNILLSG----KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRD+K NIL+ G + + KIAD G +R F + T Y PE +
Sbjct: 150 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG 209
Query: 591 NR-LTEKSDVYNFGVVLLEIITSKSVIERTHERI 623
R T+ D++ G + E++TS+ + E I
Sbjct: 210 ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 243
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 536 HRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTE 595
HRDVK NIL+S A + DFG++ + + T + T+ GT Y PE + + T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA-SATTDEKLTQLGNTV-GTLYYXAPERFSESHATY 214
Query: 596 KSDVYNFGVVLLEIIT 611
++D+Y VL E +T
Sbjct: 215 RADIYALTCVLYECLT 230
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQF------QAEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 483 LTTLVGYCDEGTNRGLIYEFM-----------ANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E M G LQ E A W+ +R
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 130
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 185
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 22/137 (16%)
Query: 430 FERVLGNGGFGTVY---------HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH 480
F LG G F ++ +G L TEV +K+L + + F ++ ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLG-----------EEADILSWEGRLRIA 529
K+L G C G L+ EF+ G+L L E A L+W +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA--MHFL 129
Query: 530 IEAAKVHRDVKSTNILL 546
E +H +V + NILL
Sbjct: 130 EENTLIHGNVCAKNILL 146
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 26/204 (12%)
Query: 428 NNFERV--LGNGGFGTVYHGY--LDGTEVAVKMLSPSSAQGYKQFQA--EVELLMRIHHK 481
+ + R+ LG G +G VY + VA+K + + A EV LL + H+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 482 NLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK------- 534
N+ L LI+E+ N + + + + + L I
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 535 VHRDVKSTNILLSGKFQA-----KIADFGLSRTF--PVEGSGTHVTTTIAGTPGYLDPEY 587
+HRD+K N+LLS + KI DFGL+R F P+ TH T+ Y PE
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-QFTHEIITL----WYRPPEI 208
Query: 588 YISNRLTEKS-DVYNFGVVLLEII 610
+ +R S D+++ + E++
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 431 ERVLGNGGFGTVYHGYLDGTE--VAVKMLSP--SSAQGYKQFQAEVELLMRIHHKNLTTL 486
+ ++G G +G VY Y TE VA+K ++ K+ E+ +L R+ + L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 487 VGYC--DEGTNRGLIYEFM--ANGNLQALL-----LGEEA------DILSWEGRLRIAIE 531
D+ +Y + A+ +L+ L L EE ++L E + E
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---E 147
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRT 562
+ +HRD+K N LL+ K+ DFGL+RT
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLART 178
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 430 FERVLGNGGFGTVY---------HGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH 480
F LG G F ++ +G L TEV +K+L + + F ++ ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADI-LSWEGRLRIAIEAAK----- 534
K+L G C G L+ EF+ G+L L + I + W+ + + AA
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131
Query: 535 ---VHRDVKSTNILL 546
+H +V + NILL
Sbjct: 132 NTLIHGNVCAKNILL 146
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 460 SSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADI 519
S Y F+ E++++ I ++ T G +IYE+M N ++ L E +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFV 139
Query: 520 LSWEGRLRIAIEAAKV-------------------HRDVKSTNILLSGKFQAKIADFGLS 560
L I I+ K HRDVK +NIL+ + K++DFG S
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 561 RTF---PVEGSGTHVTTTIAGTPGYLDPEYYISNRLT---EKSDVYNFGVVL 606
++GS GT ++ PE++ SN + K D+++ G+ L
Sbjct: 200 EYMVDKKIKGS--------RGTYEFMPPEFF-SNESSYNGAKVDIWSLGICL 242
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 431 ERVLGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLV 487
E VLG G V + E AVK++ + EVE+L + H+N+ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGE------EADILSWE--GRLRIAIEAAKVHRDV 539
+ +E L++E M G++ + + EA ++ + L HRD+
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 540 KSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTT----TIAGTPGYLDPEYY---- 588
K NIL Q KI DFGL + G + ++T T G+ Y+ PE
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 589 -ISNRLTEKSDVYNFGVVLLEIIT 611
++ ++ D+++ GV+L +++
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLS 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 130
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 185
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 145
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 200
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 131
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 186
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 145
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 200
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 131
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 186
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 83
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 84 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 140
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 141 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 196
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 197 GPEKYDKSCDMWSLGVIM 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 412 ELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLD---GTEVAVKMLSPSSAQGYKQF 468
+LK + Y + + RV G G FG V H D G + AVK + + F
Sbjct: 61 KLKPVDYEYREEVHWMTHQPRV-GRGSFGEV-HRMKDKQTGFQCAVKKVR------LEVF 112
Query: 469 QAEVELLM--RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-------------- 512
+ E EL+ + + L G EG + E + G+L L+
Sbjct: 113 RVE-ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 171
Query: 513 LGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGTH 571
LG+ + L + RI +H DVK+ N+LLS +A + DFG + +G G
Sbjct: 172 LGQALEGLEYLHTRRI------LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 225
Query: 572 VTTT--IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEII 610
+ T I GT ++ PE + K D+++ ++L ++
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 266
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 82
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 83 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 139
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 140 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 195
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 196 GPEKYDKSCDMWSLGVIM 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 173
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 228
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 146
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 201
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 126
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 181
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 434 LGNGGFGTVYHGYLD---GTEVAVKMLSPSSAQGYKQFQAEVELLM--RIHHKNLTTLVG 488
LG G FG V H D G + AVK + + F+ E EL+ + + L G
Sbjct: 80 LGRGSFGEV-HRMKDKQTGFQCAVKKVR------LEVFRVE-ELVACAGLSSPRIVPLYG 131
Query: 489 YCDEGTNRGLIYEFMANGNLQALL--------------LGEEADILSWEGRLRIAIEAAK 534
EG + E + G+L L+ LG+ + L + RI
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI------ 185
Query: 535 VHRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGTHVTTT--IAGTPGYLDPEYYISN 591
+H DVK+ N+LLS +A + DFG + +G G + T I GT ++ PE +
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 592 RLTEKSDVYNFGVVLLEII 610
K D+++ ++L ++
Sbjct: 246 PCDAKVDIWSSCCMMLHML 264
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 412 ELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYLD---GTEVAVKMLSPSSAQGYKQF 468
+LK + Y + + RV G G FG V H D G + AVK + + F
Sbjct: 45 KLKPVDYEYREEVHWMTHQPRV-GRGSFGEV-HRMKDKQTGFQCAVKKVR------LEVF 96
Query: 469 QAEVELLM--RIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQALL-------------- 512
+ E EL+ + + L G EG + E + G+L L+
Sbjct: 97 RVE-ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 155
Query: 513 LGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGTH 571
LG+ + L + RI +H DVK+ N+LLS +A + DFG + +G G
Sbjct: 156 LGQALEGLEYLHTRRI------LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209
Query: 572 VTTT--IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEII 610
+ T I GT ++ PE + K D+++ ++L ++
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 129
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 184
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 494 TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGK--FQ 551
N G E A Q L+ G +S+ +++A HRD+K N LL G +
Sbjct: 107 CNAGRFSEDEARFFFQQLISG-----VSYAHAMQVA------HRDLKLENTLLDGSPAPR 155
Query: 552 AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEK-SDVYNFGVVL 606
KIADFG S+ + + GTP Y+ PE + K +DV++ GV L
Sbjct: 156 LKIADFGYSKASVLHSQ----PKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 146
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 201
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 159
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 214
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 158
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 213
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 131
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 186
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 159
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 214
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 159
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 214
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 146
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 201
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 158
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 213
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 158
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 213
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 173
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 228
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 158
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 213
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 159
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 214
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 84
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 85 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 141
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 142 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 197
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 198 GPEKYDKSCDMWSLGVIM 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 126
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 181
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 77
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 78 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 134
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 135 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 190
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 191 GPEKYDKSCDMWSLGVIM 208
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 153
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 208
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 244
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 122
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 123 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 179
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 235
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 236 GPEKYDKSCDMWSLGVIM 253
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 76
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 77 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 189
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 190 GPEKYDKSCDMWSLGVIM 207
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 78
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 79 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 191
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 192 GPEKYDKSCDMWSLGVIM 209
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 78
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 79 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + TT TP Y+ PE
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVL 191
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 192 GPEKYDKSCDMWSLGVIM 209
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 165
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 220
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 128
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 129 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 185
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG F E + + TT TP Y+ PE
Sbjct: 186 INIAHRDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVL 241
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 242 GPEKYDKSCDMWSLGVIM 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 25/213 (11%)
Query: 433 VLGNGGFGTVYH--GYLDGTEVAVKML-----SPSSAQGYKQFQAEVELLMRIHHKNLTT 485
V+G G F V G + AVK++ + S + + E + + H ++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQ-ALLLGEEADILSWEG----RLRIAIEAAK------ 534
L+ +++EFM +L ++ +A + E +R +EA +
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 535 -VHRDVKSTNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRDVK +LL+ K + K+ FG++ G V GTP ++ PE
Sbjct: 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL---GESGLVAGGRVGTPHFMAPEVVKR 207
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSVIERTHERI 623
+ DV+ GV+L +++ T ER+
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 178
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-----KDTVYTDFDGTRVYSPPEWI 233
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 269
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 25/213 (11%)
Query: 433 VLGNGGFGTVYH--GYLDGTEVAVKML-----SPSSAQGYKQFQAEVELLMRIHHKNLTT 485
V+G G F V G + AVK++ + S + + E + + H ++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 486 LVGYCDEGTNRGLIYEFMANGNLQ-ALLLGEEADILSWEG----RLRIAIEAAK------ 534
L+ +++EFM +L ++ +A + E +R +EA +
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 535 -VHRDVKSTNILLSGKFQA---KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS 590
+HRDVK +LL+ K + K+ FG++ G V GTP ++ PE
Sbjct: 153 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL---GESGLVAGGRVGTPHFMAPEVVKR 209
Query: 591 NRLTEKSDVYNFGVVLLEIITSKSVIERTHERI 623
+ DV+ GV+L +++ T ER+
Sbjct: 210 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 242
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQ------AEVELLMRIH--HKN 482
+LG+GGFG+VY G D VA+K + + + EV LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 483 LTTLVGYCDEGTNRGLIYE-----------FMANGNLQALLLGEEADILSWE--GRLRIA 529
+ L+ + + + LI E G LQ E A W+ +R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE----ELARSFFWQVLEAVRHC 126
Query: 530 IEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+HRD+K NIL+ + + K+ DFG V T GT Y PE+
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-----DTVYTDFDGTRVYSPPEWI 181
Query: 589 ISNRLTEKS-DVYNFGVVLLEIITSKSVIERTHERI 623
+R +S V++ G++L +++ E E I
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 535 VHRDVKSTNILLSGK--FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
HRD+K N LL G + KI DFG S++ + + GTP Y+ PE +
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLKKE 191
Query: 593 LTEK-SDVYNFGVVL 606
K +DV++ GV L
Sbjct: 192 YDGKVADVWSCGVTL 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 535 VHRDVKSTNILLSGK--FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR 592
HRD+K N LL G + KI DFG S++ + + GTP Y+ PE +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLKKE 192
Query: 593 LTEK-SDVYNFGVVL 606
K +DV++ GV L
Sbjct: 193 YDGKVADVWSCGVTL 207
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 286 IAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELN-----LKGTIP 334
+ G I P I+ LT + L +++ N++G +PDFLSQ+ L L+ L GT+P
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP 142
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 273 PPRITSLN------LSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTE 326
PP I L ++ + ++G I ++S + ++ LD S N L+G +P +S LP L
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Query: 327 LNLKGTIPNGLI 338
+ G +G I
Sbjct: 154 ITFDGNRISGAI 165
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 303 LDLSNNNLTGPVPDFLSQLPFLTEL-----NLKGTIPNG 336
LDL NN + G +P L+QL FL L NL G IP G
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 46/232 (19%)
Query: 409 GSFELKNQRFSYSNV---LRITNNF--------ERVLGNGGFGTVYHGYLDGTE--VAVK 455
GS + +Q+F +V L+I N +VLG G G V + T+ A+K
Sbjct: 4 GSGAMGSQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK 63
Query: 456 MLSPSSAQGYKQFQAEVELLMRIHH-----------------KNLTTLVGYCDEGTNRGL 498
ML Q + + EVEL R + +V C +G G
Sbjct: 64 ML-----QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG---GE 115
Query: 499 IYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAKV-HRDVKSTNILLSGKFQ---AKI 554
++ + + QA E ++I+ G + + + HRDVK N+L + K K+
Sbjct: 116 LFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 175
Query: 555 ADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVL 606
DFG ++ E + + TT TP Y+ PE + + D+++ GV++
Sbjct: 176 TDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 535 VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT 594
+HRDVK +N+L++ Q K DFG+S + V+ + AG Y PE I+ L
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGIS-GYLVDDVAKDID---AGCKPYXAPE-RINPELN 213
Query: 595 E-----KSDVYNFGVVLLEI 609
+ KSD+++ G+ +E+
Sbjct: 214 QKGYSVKSDIWSLGITXIEL 233
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 431 ERVLGNGGFGTVYH--GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLV 487
E VLG G V + E AVK++ + EVE+L + H+N+ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 488 GYCDEGTNRGLIYEFMANGNLQALLLGE------EADILSWE--GRLRIAIEAAKVHRDV 539
+ +E L++E M G++ + + EA ++ + L HRD+
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 540 KSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTT----TIAGTPGYLDPEYY---- 588
K NIL Q KI DF L + G + ++T T G+ Y+ PE
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 589 -ISNRLTEKSDVYNFGVVL 606
++ ++ D+++ GV+L
Sbjct: 198 EEASIYDKRCDLWSLGVIL 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 89/242 (36%), Gaps = 57/242 (23%)
Query: 405 VAKNGSFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA 462
VA G + Q SY++ +V+GNG FG VY L G VA+K +
Sbjct: 7 VATPGQGPDRPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKV----L 54
Query: 463 QGYKQFQAEVELLMRIHHKNLTTL-------------------VGYCDEGTNRGLIYEFM 503
QG E++++ ++ H N+ L + Y E R +
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114
Query: 504 ANGNLQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQA-KIADFGLSRT 562
A L + + + + L HRD+K N+LL K+ DFG ++
Sbjct: 115 AKQTLPVIYV--KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 563 FPVEGSGTHVTTTIAGTP--GYLDPEYYISNRL-------TEKSDVYNFGVVLLEIITSK 613
+ G P Y+ YY + L T DV++ G VL E++ +
Sbjct: 173 L------------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 614 SV 615
+
Sbjct: 221 PI 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 89/242 (36%), Gaps = 57/242 (23%)
Query: 405 VAKNGSFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA 462
VA G + Q SY++ +V+GNG FG VY L G VA+K +
Sbjct: 7 VATPGQGPDRPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKV----L 54
Query: 463 QGYKQFQAEVELLMRIHHKNLTTL-------------------VGYCDEGTNRGLIYEFM 503
QG E++++ ++ H N+ L + Y E R +
Sbjct: 55 QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 114
Query: 504 ANGNLQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQA-KIADFGLSRT 562
A L + + + + L HRD+K N+LL K+ DFG ++
Sbjct: 115 AKQTLPVIYV--KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 563 FPVEGSGTHVTTTIAGTP--GYLDPEYYISNRL-------TEKSDVYNFGVVLLEIITSK 613
+ G P Y+ YY + L T DV++ G VL E++ +
Sbjct: 173 L------------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 614 SV 615
+
Sbjct: 221 PI 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 30/200 (15%)
Query: 434 LGNGGFGTVYHGY--LDGTEVAVKMLSPSSA--------QGYKQFQAEVELLMRIHHKNL 483
LG+G FG V+ EV VK + + E+ +L R+ H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 484 TTLVGYCDEGTNRGLIYEFMANG-NLQALL-----LGEE------ADILSWEGRLRIAIE 531
++ + L+ E +G +L A + L E ++S G LR+
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK-- 149
Query: 532 AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591
+HRD+K NI+++ F K+ DFG S + G + T GT Y PE + N
Sbjct: 150 -DIIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGK---LFYTFCGTIEYCAPEVLMGN 204
Query: 592 RLT-EKSDVYNFGVVLLEII 610
+ ++++ GV L ++
Sbjct: 205 PYRGPELEMWSLGVTLYTLV 224
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 508 LQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRT 562
L LLLGE + E+ +HRD+K N LL+ KI DFGL+RT
Sbjct: 137 LYNLLLGE-----------KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLART 180
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 432 RVLGNGGFGTVYHGYLDGTE--VAVKMLSPSSAQGYKQFQAEVELLMRIHH--------- 480
+VLG G G V + T+ A+KML Q + + EVEL R
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPHIVRIVD 76
Query: 481 --------KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA 532
+ +V C +G G ++ + + QA E ++I+ G + +
Sbjct: 77 VYENLYAGRKCLLIVMECLDG---GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 533 AKV-HRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY 588
+ HRDVK N+L + K K+ DFG ++ E + + T TP Y+ PE
Sbjct: 134 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYVAPEVL 189
Query: 589 ISNRLTEKSDVYNFGVVL 606
+ + D+++ GV++
Sbjct: 190 GPEKYDKSCDMWSLGVIM 207
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 433 VLGNGGFGTVYHGY--LDGTEVAVKMLSP--SSAQGYKQFQAEVELLMRIHH----KNLT 484
++G G +G V Y L+ VA+K + K+ E+ +L R++H K L
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGE----EADILSWEGRLRIAIE----AAKVH 536
++ E + + +A+ + + L E I + L + ++ A +H
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILH 179
Query: 537 RDVKSTNILLSGKFQAKIADFGLSRT--FPVEGSGT----------------HVTTTIAG 578
RD+K N L++ K+ DFGL+RT +P G+ H
Sbjct: 180 RDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQ 239
Query: 579 TPGYLDPEYYISNRL-------TEKSDVYNFGVVLLEII 610
G++ +Y + L TE DV++ G + E++
Sbjct: 240 LTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 57/243 (23%)
Query: 405 VAKNGSFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA 462
VA G + Q SY++ +V+GNG FG VY L G VA+K +
Sbjct: 43 VATPGQGPDRPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKV----L 90
Query: 463 QGYKQFQAEVELLMRIHHKNLTTL-------------------VGYCDEGTNRGLIYEFM 503
Q + E++++ ++ H N+ L + Y E R +
Sbjct: 91 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 150
Query: 504 ANGNLQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQA-KIADFGLSRT 562
A L + + + + L HRD+K N+LL K+ DFG ++
Sbjct: 151 AKQTLPVIYV--KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
Query: 563 FPVEGSGTHVTTTIAGTP--GYLDPEYYISNRL-------TEKSDVYNFGVVLLEIITSK 613
+ G P Y+ YY + L T DV++ G VL E++ +
Sbjct: 209 L------------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
Query: 614 SVI 616
+
Sbjct: 257 PIF 259
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 89/242 (36%), Gaps = 57/242 (23%)
Query: 405 VAKNGSFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA 462
VA G + Q SY++ +V+GNG FG VY L G VA+K +
Sbjct: 20 VATPGQGPDRPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKV----L 67
Query: 463 QGYKQFQAEVELLMRIHHKNLTTL-------------------VGYCDEGTNRGLIYEFM 503
Q + E++++ ++ H N+ L + Y E R +
Sbjct: 68 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 504 ANGNLQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQA-KIADFGLSRT 562
A L + + + + L HRD+K N+LL K+ DFG ++
Sbjct: 128 AKQTLPVIYV--KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
Query: 563 FPVEGSGTHVTTTIAGTP--GYLDPEYYISNRL-------TEKSDVYNFGVVLLEIITSK 613
+ G P Y+ YY + L T DV++ G VL E++ +
Sbjct: 186 L------------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
Query: 614 SV 615
+
Sbjct: 234 PI 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 57/243 (23%)
Query: 405 VAKNGSFELKNQRFSYSNVLRITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA 462
VA G + Q SY++ +V+GNG FG VY L G VA+K +
Sbjct: 35 VATPGQGPDRPQEVSYTDT--------KVIGNGSFGVVYQAKLCDSGELVAIKKV----L 82
Query: 463 QGYKQFQAEVELLMRIHHKNLTTL-------------------VGYCDEGTNRGLIYEFM 503
Q + E++++ ++ H N+ L + Y E R +
Sbjct: 83 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 142
Query: 504 ANGNLQALLLGEEADILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQA-KIADFGLSRT 562
A L + + + + L HRD+K N+LL K+ DFG ++
Sbjct: 143 AKQTLPVIYV--KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200
Query: 563 FPVEGSGTHVTTTIAGTP--GYLDPEYYISNRL-------TEKSDVYNFGVVLLEIITSK 613
+ G P Y+ YY + L T DV++ G VL E++ +
Sbjct: 201 L------------VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
Query: 614 SVI 616
+
Sbjct: 249 PIF 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,667,848
Number of Sequences: 62578
Number of extensions: 896782
Number of successful extensions: 4528
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 275
Number of HSP's that attempted gapping in prelim test: 2424
Number of HSP's gapped (non-prelim): 1198
length of query: 723
length of database: 14,973,337
effective HSP length: 106
effective length of query: 617
effective length of database: 8,340,069
effective search space: 5145822573
effective search space used: 5145822573
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)