Query 004935
Match_columns 723
No_of_seqs 653 out of 3968
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:18:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 2.5E-47 8.6E-52 404.5 21.2 245 430-689 45-320 (329)
2 4gt4_A Tyrosine-protein kinase 100.0 2.3E-48 8E-53 408.6 11.8 246 426-686 26-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-47 4.8E-52 401.0 16.0 244 430-688 17-289 (299)
4 3omv_A RAF proto-oncogene seri 100.0 1.4E-46 4.9E-51 393.5 21.1 244 430-686 40-298 (307)
5 4ase_A Vascular endothelial gr 100.0 5E-45 1.7E-49 390.0 17.7 248 429-690 67-349 (353)
6 3hmm_A TGF-beta receptor type- 100.0 6.2E-45 2.1E-49 383.1 18.1 254 430-691 7-300 (303)
7 4g3f_A NF-kappa-beta-inducing 100.0 1E-43 3.6E-48 375.4 16.9 243 431-692 63-320 (336)
8 4b9d_A Serine/threonine-protei 100.0 9.2E-44 3.2E-48 377.5 15.5 236 429-681 27-276 (350)
9 3fpq_A Serine/threonine-protei 100.0 1.9E-43 6.6E-48 367.1 17.0 234 430-681 30-282 (290)
10 4fih_A Serine/threonine-protei 100.0 5E-44 1.7E-48 379.0 10.4 236 431-681 79-323 (346)
11 4fie_A Serine/threonine-protei 100.0 5.9E-43 2E-47 379.8 12.4 237 430-681 155-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.6E-43 1.2E-47 366.9 8.5 237 428-680 34-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.1E-41 3.6E-46 350.9 14.5 233 429-681 16-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.8E-42 1.3E-46 359.1 4.9 231 428-676 26-271 (304)
15 4g31_A Eukaryotic translation 100.0 1.7E-40 5.9E-45 347.8 16.3 236 430-681 9-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 8.3E-39 2.8E-43 340.0 21.5 260 431-691 44-318 (321)
17 3uim_A Brassinosteroid insensi 100.0 2.2E-38 7.6E-43 337.3 17.4 270 416-687 18-310 (326)
18 2nru_A Interleukin-1 receptor- 100.0 3.6E-37 1.2E-41 325.0 24.8 271 415-688 12-306 (307)
19 4b99_A Mitogen-activated prote 100.0 4E-38 1.4E-42 342.3 16.8 249 429-681 57-344 (398)
20 4f9c_A Cell division cycle 7-r 100.0 5.9E-38 2E-42 337.3 14.3 191 429-621 24-252 (361)
21 3uto_A Twitchin; kinase, muscl 100.0 2.9E-37 1E-41 351.7 18.1 238 429-681 160-410 (573)
22 3p86_A Serine/threonine-protei 100.0 1E-36 3.6E-41 322.1 18.6 247 430-692 41-302 (309)
23 3kul_A Ephrin type-A receptor 100.0 9.3E-37 3.2E-41 324.9 17.1 247 430-691 53-316 (325)
24 3s95_A LIMK-1, LIM domain kina 100.0 3.7E-36 1.3E-40 317.8 19.6 244 430-691 14-285 (310)
25 2psq_A Fibroblast growth facto 100.0 3E-36 1E-40 326.7 19.0 247 430-691 85-367 (370)
26 3v5w_A G-protein coupled recep 100.0 6.8E-37 2.3E-41 346.7 13.9 235 430-681 193-449 (689)
27 3soc_A Activin receptor type-2 100.0 3.1E-36 1.1E-40 320.4 17.4 250 430-689 28-319 (322)
28 2qol_A Ephrin receptor; recept 100.0 1.4E-36 4.7E-41 329.8 14.7 247 430-691 49-312 (373)
29 3ugc_A Tyrosine-protein kinase 100.0 2.5E-36 8.6E-41 316.7 15.9 250 429-688 13-291 (295)
30 1k9a_A Carboxyl-terminal SRC k 100.0 5.9E-36 2E-40 333.0 18.9 237 430-688 197-445 (450)
31 2c30_A Serine/threonine-protei 100.0 9.1E-36 3.1E-40 316.7 19.3 249 415-681 22-294 (321)
32 3fxz_A Serine/threonine-protei 100.0 6.7E-36 2.3E-40 314.0 17.2 233 431-681 25-269 (297)
33 3vhe_A Vascular endothelial gr 100.0 9.4E-36 3.2E-40 321.3 17.8 247 430-690 26-357 (359)
34 3lb7_A RAF proto-oncogene seri 100.0 6.2E-35 2.1E-39 308.2 21.6 247 429-688 39-300 (307)
35 3tt0_A Basic fibroblast growth 100.0 2.7E-35 9.3E-40 320.8 19.0 249 430-693 73-357 (382)
36 3kmu_A ILK, integrin-linked ki 100.0 2.9E-35 9.9E-40 304.0 18.2 237 430-687 14-269 (271)
37 1opk_A P150, C-ABL, proto-onco 100.0 6.2E-36 2.1E-40 336.7 14.3 244 429-689 223-479 (495)
38 3q4u_A Activin receptor type-1 100.0 3E-35 1E-39 309.1 18.3 247 430-686 12-300 (301)
39 1t46_A HOMO sapiens V-KIT hard 100.0 3.3E-35 1.1E-39 310.6 18.7 248 429-690 26-309 (313)
40 3cbl_A C-FES, proto-oncogene t 100.0 2.8E-36 9.7E-41 327.9 10.3 244 430-689 118-375 (377)
41 1rjb_A FL cytokine receptor; k 100.0 2.4E-35 8.3E-40 316.2 17.3 249 429-691 48-337 (344)
42 4euu_A Serine/threonine-protei 100.0 1.4E-34 4.6E-39 307.2 22.6 255 430-688 13-309 (319)
43 4eqm_A Protein kinase; transfe 100.0 1.7E-35 5.9E-40 310.4 14.5 249 430-692 15-279 (294)
44 1qcf_A Haematopoetic cell kina 100.0 1.1E-35 3.9E-40 331.2 13.7 241 430-688 192-444 (454)
45 3dtc_A Mitogen-activated prote 100.0 3.1E-35 1.1E-39 304.2 15.5 236 430-686 11-271 (271)
46 3poz_A Epidermal growth factor 100.0 2.8E-35 9.5E-40 313.7 15.5 245 430-691 19-281 (327)
47 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-35 5.8E-40 320.6 13.9 248 430-692 75-349 (367)
48 4hcu_A Tyrosine-protein kinase 100.0 3E-35 1E-39 304.2 15.1 241 430-688 14-266 (269)
49 1luf_A Muscle-specific tyrosin 100.0 2.5E-35 8.7E-40 315.8 14.9 245 430-689 51-336 (343)
50 2eva_A TAK1 kinase - TAB1 chim 100.0 6.5E-35 2.2E-39 308.0 17.8 239 430-690 12-265 (307)
51 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-35 7.1E-40 313.4 13.8 250 430-691 35-313 (318)
52 2ivs_A Proto-oncogene tyrosine 100.0 3.4E-35 1.1E-39 310.7 15.3 245 430-689 27-312 (314)
53 3fe3_A MAP/microtubule affinit 100.0 7.3E-35 2.5E-39 310.4 17.3 233 430-681 19-264 (328)
54 2i1m_A Macrophage colony-stimu 100.0 4.9E-35 1.7E-39 312.4 15.6 249 430-692 50-330 (333)
55 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.6E-35 8.8E-40 328.1 13.7 242 430-689 188-441 (452)
56 3sxs_A Cytoplasmic tyrosine-pr 100.0 6E-35 2.1E-39 301.6 15.4 243 430-690 12-266 (268)
57 1u59_A Tyrosine-protein kinase 100.0 2.2E-34 7.6E-39 300.7 19.8 247 432-694 16-278 (287)
58 1mqb_A Ephrin type-A receptor 100.0 1.7E-34 5.8E-39 308.5 19.2 247 431-692 49-313 (333)
59 1mp8_A Focal adhesion kinase 1 100.0 9.4E-35 3.2E-39 302.6 16.8 246 429-692 18-280 (281)
60 3gen_A Tyrosine-protein kinase 100.0 5.3E-35 1.8E-39 304.6 14.9 243 430-690 28-282 (283)
61 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-34 4.6E-39 302.8 17.9 247 429-688 27-288 (289)
62 3zgw_A Maternal embryonic leuc 100.0 6.6E-35 2.3E-39 312.8 15.8 233 430-681 14-260 (347)
63 2ozo_A Tyrosine-protein kinase 100.0 1.6E-34 5.4E-39 333.0 19.5 242 433-690 343-600 (613)
64 3kfa_A Tyrosine-protein kinase 100.0 1.3E-34 4.5E-39 302.3 17.1 246 430-692 17-275 (288)
65 3lxl_A Tyrosine-protein kinase 100.0 1.5E-35 5.1E-40 315.7 9.9 253 430-692 27-307 (327)
66 1b6c_B TGF-B superfamily recep 100.0 3E-34 1E-38 307.3 19.9 260 421-691 37-339 (342)
67 3qup_A Tyrosine-protein kinase 100.0 8E-35 2.7E-39 309.4 15.0 248 429-691 26-301 (323)
68 3op5_A Serine/threonine-protei 100.0 9.5E-35 3.2E-39 314.4 15.6 258 430-693 39-334 (364)
69 4fvq_A Tyrosine-protein kinase 100.0 1.2E-34 4.1E-39 302.8 15.8 243 429-694 11-281 (289)
70 3gxj_A TGF-beta receptor type- 100.0 3.4E-36 1.2E-40 316.5 3.9 255 429-691 6-300 (303)
71 2izr_A Casein kinase I isoform 100.0 1.1E-34 3.7E-39 309.5 15.6 251 430-692 13-285 (330)
72 3mdy_A Bone morphogenetic prot 100.0 5.3E-34 1.8E-38 304.6 20.8 256 426-691 37-334 (337)
73 2xir_A Vascular endothelial gr 100.0 1.6E-34 5.5E-39 305.7 16.6 247 430-690 31-312 (316)
74 4e5w_A Tyrosine-protein kinase 100.0 3.3E-34 1.1E-38 301.5 18.8 248 429-687 24-301 (302)
75 2x4f_A Myosin light chain kina 100.0 1.5E-34 5.2E-39 313.5 16.6 240 431-686 94-349 (373)
76 2pvf_A Fibroblast growth facto 100.0 2.9E-34 9.9E-39 306.8 18.5 249 429-692 38-322 (334)
77 2y0a_A Death-associated protei 100.0 3.1E-34 1.1E-38 305.5 18.2 238 427-681 12-271 (326)
78 3niz_A Rhodanese family protei 100.0 4.8E-34 1.6E-38 302.0 18.8 247 430-681 25-300 (311)
79 1byg_A CSK, protein (C-termina 100.0 9.6E-35 3.3E-39 301.9 13.1 238 430-689 25-274 (278)
80 3tki_A Serine/threonine-protei 100.0 1.7E-34 5.9E-39 307.1 15.0 237 430-681 11-261 (323)
81 2w1i_A JAK2; chromosomal rearr 100.0 3.4E-34 1.2E-38 305.1 17.3 249 430-688 45-322 (326)
82 4fl3_A Tyrosine-protein kinase 100.0 1.8E-34 6.3E-39 333.4 16.3 240 432-688 375-631 (635)
83 1tki_A Titin; serine kinase, m 100.0 2.6E-34 8.8E-39 305.4 15.9 235 430-681 9-257 (321)
84 4eut_A Serine/threonine-protei 100.0 4.6E-34 1.6E-38 312.6 18.2 256 430-689 13-310 (396)
85 1xbb_A Tyrosine-protein kinase 100.0 4.3E-34 1.5E-38 299.1 17.2 244 433-693 24-284 (291)
86 2yab_A Death-associated protei 100.0 2.7E-34 9.3E-39 309.8 16.0 236 429-681 15-272 (361)
87 4f0f_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38 297.5 17.6 237 430-686 23-287 (287)
88 3kex_A Receptor tyrosine-prote 100.0 5.1E-34 1.7E-38 303.7 17.5 247 430-692 17-280 (325)
89 1kob_A Twitchin; kinase, intra 100.0 7.2E-34 2.5E-38 309.3 19.0 237 429-681 54-304 (387)
90 3cc6_A Protein tyrosine kinase 100.0 6.3E-34 2.1E-38 296.2 17.7 245 430-692 16-277 (281)
91 3soa_A Calcium/calmodulin-depe 100.0 1.3E-33 4.3E-38 312.7 21.1 238 428-681 13-267 (444)
92 2h8h_A Proto-oncogene tyrosine 100.0 7.7E-35 2.6E-39 330.8 11.5 242 429-688 270-523 (535)
93 3ork_A Serine/threonine protei 100.0 9.2E-35 3.2E-39 307.4 11.3 246 429-687 15-280 (311)
94 1qpc_A LCK kinase; alpha beta 100.0 3.2E-34 1.1E-38 298.0 15.2 242 430-689 17-270 (279)
95 3f66_A Hepatocyte growth facto 100.0 8.2E-34 2.8E-38 297.9 18.4 244 430-688 29-291 (298)
96 1csn_A Casein kinase-1; phosph 100.0 4.7E-34 1.6E-38 299.5 16.3 249 430-691 14-286 (298)
97 3gni_B Strad alpha; kinase fol 100.0 4.7E-34 1.6E-38 311.8 17.0 253 430-682 29-334 (389)
98 2bdw_A Hypothetical protein K1 100.0 9.3E-34 3.2E-38 306.2 18.9 238 427-681 30-284 (362)
99 3pls_A Macrophage-stimulating 100.0 1.4E-33 4.8E-38 295.9 19.7 245 431-689 26-288 (298)
100 2wqm_A Serine/threonine-protei 100.0 1.8E-33 6.2E-38 297.1 20.6 253 429-695 35-304 (310)
101 3c0i_A Peripheral plasma membr 100.0 1.1E-33 3.7E-38 304.5 19.0 240 427-681 25-286 (351)
102 3lzb_A Epidermal growth factor 100.0 2.5E-34 8.6E-39 306.3 13.8 246 430-692 19-282 (327)
103 1o6l_A RAC-beta serine/threoni 100.0 8E-34 2.7E-38 303.3 17.6 232 430-681 9-260 (337)
104 3t9t_A Tyrosine-protein kinase 100.0 3.6E-34 1.2E-38 295.4 14.4 241 430-688 12-264 (267)
105 3c1x_A Hepatocyte growth facto 100.0 6.4E-34 2.2E-38 308.6 16.9 244 430-688 93-355 (373)
106 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-33 3.9E-38 299.9 18.2 249 429-681 8-293 (317)
107 2w4o_A Calcium/calmodulin-depe 100.0 5.8E-34 2E-38 306.3 16.1 234 430-681 57-305 (349)
108 2zv2_A Calcium/calmodulin-depe 100.0 7.3E-34 2.5E-38 298.4 16.5 233 430-681 17-292 (298)
109 2jii_A Serine/threonine-protei 100.0 5.7E-34 1.9E-38 306.8 15.8 252 430-692 46-340 (352)
110 3qd2_B Eukaryotic translation 100.0 6.6E-34 2.3E-38 302.9 16.0 236 430-681 10-325 (332)
111 3g2f_A Bone morphogenetic prot 100.0 4.7E-34 1.6E-38 305.1 14.7 253 430-689 17-319 (336)
112 3p1a_A MYT1 kinase, membrane-a 100.0 6.2E-34 2.1E-38 301.1 15.4 235 424-681 55-304 (311)
113 3g33_A Cell division protein k 100.0 1.2E-33 4E-38 298.3 17.2 249 428-681 11-296 (308)
114 1p4o_A Insulin-like growth fac 100.0 2.7E-34 9.2E-39 305.1 12.1 246 430-690 29-301 (322)
115 2a19_B Interferon-induced, dou 100.0 8.7E-34 3E-38 295.2 15.7 237 426-689 11-275 (284)
116 2v62_A Serine/threonine-protei 100.0 5E-34 1.7E-38 306.4 13.9 251 430-687 41-327 (345)
117 1u5q_A Serine/threonine protei 100.0 1.5E-33 5E-38 303.0 17.5 230 430-681 58-305 (348)
118 1ob3_A PFPK5, cell division co 100.0 1.4E-33 4.8E-38 294.8 16.9 247 430-681 6-280 (288)
119 3ll6_A Cyclin G-associated kin 100.0 7E-34 2.4E-38 303.4 14.7 245 430-692 32-312 (337)
120 1fvr_A Tyrosine-protein kinase 100.0 7.7E-34 2.6E-38 302.5 14.9 246 429-692 28-304 (327)
121 3o0g_A Cell division protein k 100.0 2.3E-33 8E-38 293.7 18.2 247 430-681 6-282 (292)
122 3hko_A Calcium/calmodulin-depe 100.0 9.7E-34 3.3E-38 303.8 15.5 243 428-681 28-330 (345)
123 2h34_A Serine/threonine-protei 100.0 2.9E-33 9.8E-38 295.7 18.5 246 430-692 38-300 (309)
124 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.7E-34 2.3E-38 305.9 13.8 227 430-676 27-269 (353)
125 3brb_A Proto-oncogene tyrosine 100.0 1.9E-33 6.6E-38 297.3 17.1 244 430-688 38-308 (313)
126 3uc3_A Serine/threonine-protei 100.0 1.7E-33 5.9E-38 304.0 17.0 237 429-681 23-274 (361)
127 3llt_A Serine/threonine kinase 100.0 1.9E-33 6.5E-38 303.5 17.0 244 429-681 38-355 (360)
128 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-33 4.8E-38 300.3 15.6 235 432-681 17-270 (325)
129 1nxk_A MAP kinase-activated pr 100.0 2.7E-33 9.2E-38 306.7 18.3 232 432-682 68-322 (400)
130 3lm5_A Serine/threonine-protei 100.0 2.4E-33 8.2E-38 298.8 17.2 250 417-681 19-287 (327)
131 2yfx_A Tyrosine-protein kinase 100.0 1.2E-33 4.2E-38 300.9 14.9 249 429-692 33-308 (327)
132 4dc2_A Protein kinase C IOTA t 100.0 2.7E-33 9.2E-38 305.1 17.7 232 430-676 56-307 (396)
133 3dbq_A Dual specificity protei 100.0 1.8E-33 6.2E-38 301.8 15.9 236 430-682 13-274 (343)
134 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-33 7.5E-38 297.7 16.1 229 430-681 10-258 (318)
135 2zmd_A Dual specificity protei 100.0 2.4E-33 8.1E-38 306.1 16.9 235 430-681 60-320 (390)
136 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-33 4.8E-38 301.2 14.7 230 430-681 13-258 (336)
137 4fr4_A YANK1, serine/threonine 100.0 2.4E-33 8.1E-38 304.4 16.6 234 430-681 19-271 (384)
138 2a2a_A Death-associated protei 100.0 2.5E-33 8.7E-38 297.7 16.4 238 427-681 13-272 (321)
139 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-33 6.3E-38 292.0 14.9 236 428-681 11-261 (277)
140 3a62_A Ribosomal protein S6 ki 100.0 3.2E-33 1.1E-37 297.8 17.1 235 429-681 20-276 (327)
141 4aw2_A Serine/threonine-protei 100.0 2E-33 6.7E-38 310.1 16.0 238 431-681 79-338 (437)
142 2clq_A Mitogen-activated prote 100.0 4.3E-33 1.5E-37 291.7 17.7 235 432-681 28-278 (295)
143 2acx_A G protein-coupled recep 100.0 2.9E-33 9.9E-38 316.4 17.5 236 431-681 189-444 (576)
144 2ac3_A MAP kinase-interacting 100.0 5.8E-33 2E-37 294.0 18.7 242 432-681 19-295 (316)
145 3is5_A Calcium-dependent prote 100.0 7.1E-33 2.4E-37 289.1 19.0 237 428-681 24-278 (285)
146 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.9E-33 2.7E-37 299.4 20.0 238 430-690 69-341 (365)
147 4agu_A Cyclin-dependent kinase 100.0 4.2E-33 1.4E-37 294.4 17.4 246 430-681 7-284 (311)
148 3a8x_A Protein kinase C IOTA t 100.0 4.7E-33 1.6E-37 298.5 17.9 232 430-676 13-264 (345)
149 2buj_A Serine/threonine-protei 100.0 1E-33 3.5E-38 299.9 12.6 245 430-687 33-305 (317)
150 3kk8_A Calcium/calmodulin depe 100.0 5E-33 1.7E-37 289.7 17.3 235 430-681 10-261 (284)
151 3v8s_A RHO-associated protein 100.0 7.1E-34 2.4E-38 311.3 11.3 238 431-681 74-329 (410)
152 4hgt_A Casein kinase I isoform 100.0 2.5E-33 8.7E-38 293.5 14.9 251 429-693 12-285 (296)
153 1xjd_A Protein kinase C, theta 100.0 1.5E-33 5E-38 302.2 13.1 231 430-680 21-268 (345)
154 1u46_A ACK-1, activated CDC42 100.0 1E-33 3.4E-38 295.9 11.6 244 430-688 22-284 (291)
155 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-33 9.3E-38 300.9 15.0 229 430-681 45-293 (350)
156 1t4h_A Serine/threonine-protei 100.0 5E-33 1.7E-37 290.8 16.5 232 430-681 30-282 (290)
157 3ttj_A Mitogen-activated prote 100.0 7.1E-33 2.4E-37 308.9 18.6 243 430-681 66-355 (464)
158 2jam_A Calcium/calmodulin-depe 100.0 5.2E-33 1.8E-37 292.8 16.6 237 427-681 10-261 (304)
159 2eue_A Carbon catabolite derep 100.0 5.1E-33 1.7E-37 288.4 16.2 230 430-681 17-262 (275)
160 4aaa_A Cyclin-dependent kinase 100.0 2.8E-33 9.5E-38 298.7 14.5 247 430-681 29-306 (331)
161 3uzp_A CKI-delta, CKID, casein 100.0 8.6E-33 3E-37 289.6 18.0 250 430-693 13-285 (296)
162 3bhy_A Death-associated protei 100.0 4.4E-33 1.5E-37 289.9 15.7 238 427-681 6-265 (283)
163 2yex_A Serine/threonine-protei 100.0 6.3E-33 2.1E-37 287.6 16.3 238 429-681 10-261 (276)
164 3kvw_A DYRK2, dual specificity 100.0 6.5E-33 2.2E-37 306.5 17.3 245 429-681 100-408 (429)
165 2i0e_A Protein kinase C-beta I 100.0 4.3E-33 1.5E-37 299.5 14.8 227 430-676 24-266 (353)
166 3c4z_A Rhodopsin kinase; Ser/T 100.0 9E-33 3.1E-37 311.6 18.0 233 431-677 190-439 (543)
167 4ejn_A RAC-alpha serine/threon 100.0 2.2E-33 7.6E-38 312.1 12.9 232 430-681 152-404 (446)
168 3fdn_A Serine/threonine-protei 100.0 5E-33 1.7E-37 289.1 14.5 231 430-682 13-258 (279)
169 2y94_A 5'-AMP-activated protei 100.0 6E-33 2E-37 309.4 15.9 231 430-681 20-266 (476)
170 3cok_A Serine/threonine-protei 100.0 9.3E-33 3.2E-37 286.8 16.1 233 430-681 15-262 (278)
171 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3E-33 1E-37 298.3 12.7 246 430-681 38-318 (329)
172 3nsz_A CK II alpha, casein kin 100.0 1.3E-32 4.4E-37 293.2 17.6 245 430-681 40-319 (330)
173 3oz6_A Mitogen-activated prote 100.0 3.2E-33 1.1E-37 305.0 13.2 249 429-682 12-329 (388)
174 1ua2_A CAK, cell division prot 100.0 1.3E-32 4.4E-37 295.5 17.3 249 429-681 13-291 (346)
175 3dls_A PAS domain-containing s 100.0 3.6E-33 1.2E-37 298.4 12.8 226 430-682 28-275 (335)
176 2vd5_A DMPK protein; serine/th 100.0 6.2E-33 2.1E-37 304.0 14.6 237 431-681 66-327 (412)
177 3i6u_A CDS1, serine/threonine- 100.0 4.1E-33 1.4E-37 307.2 13.2 237 428-681 137-399 (419)
178 3byv_A Rhoptry kinase; malaria 100.0 9.9E-34 3.4E-38 307.9 8.2 232 431-689 78-369 (377)
179 3eqc_A Dual specificity mitoge 100.0 4.5E-33 1.5E-37 300.7 13.2 243 431-681 38-324 (360)
180 1vzo_A Ribosomal protein S6 ki 100.0 3.3E-33 1.1E-37 301.2 11.8 239 429-682 57-322 (355)
181 2rku_A Serine/threonine-protei 100.0 1.5E-32 5E-37 287.9 16.4 232 430-681 19-265 (294)
182 2j0j_A Focal adhesion kinase 1 100.0 1.7E-32 5.8E-37 318.2 18.6 245 429-691 393-654 (656)
183 2j7t_A Serine/threonine-protei 100.0 5.5E-33 1.9E-37 292.1 13.1 236 430-681 23-275 (302)
184 3a7i_A MST3 kinase, serine/thr 100.0 2.6E-32 8.9E-37 287.3 18.0 232 431-682 27-271 (303)
185 2w5a_A Serine/threonine-protei 100.0 4E-33 1.4E-37 289.6 11.4 238 430-684 10-270 (279)
186 2qr7_A Ribosomal protein S6 ki 100.0 2.1E-32 7.2E-37 293.1 17.3 237 428-681 24-277 (342)
187 2owb_A Serine/threonine-protei 100.0 1.6E-32 5.4E-37 293.4 16.1 232 430-681 45-291 (335)
188 2r5t_A Serine/threonine-protei 100.0 5.6E-33 1.9E-37 300.8 12.7 238 430-685 42-293 (373)
189 2r3i_A Cell division protein k 100.0 2.6E-32 8.8E-37 286.5 16.8 248 430-681 7-283 (299)
190 2vx3_A Dual specificity tyrosi 100.0 5.3E-32 1.8E-36 294.8 19.7 244 430-681 58-372 (382)
191 1cm8_A Phosphorylated MAP kina 100.0 2.1E-32 7.3E-37 296.1 16.4 241 430-681 29-307 (367)
192 2vwi_A Serine/threonine-protei 100.0 5.2E-33 1.8E-37 292.2 10.7 244 430-681 19-287 (303)
193 2x7f_A TRAF2 and NCK-interacti 100.0 2.4E-32 8.4E-37 290.5 16.0 235 430-681 28-286 (326)
194 2y7j_A Phosphorylase B kinase 100.0 2.3E-32 7.9E-37 295.7 16.0 234 431-681 99-359 (365)
195 3q60_A ROP5B; pseudokinase, tr 100.0 6.4E-33 2.2E-37 300.8 11.7 239 430-681 66-352 (371)
196 3sv0_A Casein kinase I-like; t 100.0 2.1E-32 7.4E-37 305.5 16.2 249 430-691 11-281 (483)
197 3qyz_A Mitogen-activated prote 100.0 5.4E-32 1.8E-36 292.7 18.8 248 429-681 30-313 (364)
198 2vgo_A Serine/threonine-protei 100.0 1.7E-32 5.9E-37 285.8 14.3 230 430-681 18-262 (284)
199 3mtl_A Cell division protein k 100.0 9.6E-33 3.3E-37 293.7 12.6 246 430-681 6-281 (324)
200 1wak_A Serine/threonine-protei 100.0 3.7E-32 1.3E-36 297.0 17.6 246 428-681 39-391 (397)
201 2xrw_A Mitogen-activated prote 100.0 4.1E-32 1.4E-36 294.5 17.7 243 430-681 29-318 (371)
202 3eb0_A Putative uncharacterize 100.0 1.1E-32 3.8E-37 300.3 13.2 244 429-681 10-321 (383)
203 2i6l_A Mitogen-activated prote 100.0 4.3E-32 1.5E-36 287.3 17.3 248 430-681 15-305 (320)
204 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-32 6E-37 285.5 13.9 229 429-681 14-279 (289)
205 2wtk_C Serine/threonine-protei 100.0 3.9E-32 1.3E-36 286.0 16.6 235 430-681 9-263 (305)
206 2ycf_A Serine/threonine-protei 100.0 2.4E-32 8.3E-37 290.2 15.0 239 426-681 10-274 (322)
207 3com_A Serine/threonine-protei 100.0 2.5E-32 8.4E-37 288.9 15.0 234 430-681 33-278 (314)
208 1phk_A Phosphorylase kinase; g 100.0 5.6E-32 1.9E-36 283.8 17.4 235 430-681 21-283 (298)
209 3rp9_A Mitogen-activated prote 100.0 1.3E-31 4.4E-36 299.0 21.3 181 429-612 56-280 (458)
210 3lij_A Calcium/calmodulin depe 100.0 3.8E-32 1.3E-36 306.1 16.9 237 427-681 38-291 (494)
211 1j1b_A Glycogen synthase kinas 100.0 1.5E-32 5.2E-37 302.7 13.2 243 430-681 58-336 (420)
212 2h6d_A 5'-AMP-activated protei 100.0 4.5E-32 1.5E-36 281.2 15.8 231 430-681 15-261 (276)
213 1z57_A Dual specificity protei 100.0 9.8E-32 3.4E-36 286.8 18.9 244 429-681 17-328 (339)
214 2pml_X PFPK7, Ser/Thr protein 100.0 8.4E-33 2.9E-37 296.9 10.7 243 430-681 35-322 (348)
215 3nyv_A Calmodulin-domain prote 100.0 2.2E-32 7.6E-37 307.3 14.5 237 427-681 27-281 (484)
216 3mwu_A Calmodulin-domain prote 100.0 4.8E-32 1.6E-36 304.7 17.2 238 426-681 22-276 (486)
217 3n9x_A Phosphotransferase; mal 100.0 9.9E-32 3.4E-36 297.4 19.3 185 429-616 29-252 (432)
218 3fme_A Dual specificity mitoge 100.0 2.7E-32 9.2E-37 284.9 13.9 235 430-681 11-266 (290)
219 3mi9_A Cell division protein k 100.0 1.1E-31 3.7E-36 288.8 19.0 249 430-681 21-311 (351)
220 3an0_A Dual specificity mitoge 100.0 2.5E-32 8.5E-37 292.4 13.6 234 431-681 56-310 (340)
221 1blx_A Cyclin-dependent kinase 100.0 5.4E-32 1.8E-36 287.7 15.9 247 430-681 15-296 (326)
222 3rgf_A Cyclin-dependent kinase 100.0 8E-32 2.7E-36 295.7 17.7 247 431-681 26-333 (405)
223 3pg1_A Mitogen-activated prote 100.0 2.6E-32 8.8E-37 294.9 13.5 244 431-681 27-316 (362)
224 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-32 4E-37 291.9 10.4 247 430-692 37-306 (319)
225 4e7w_A Glycogen synthase kinas 100.0 3.5E-32 1.2E-36 297.4 14.0 245 429-681 43-321 (394)
226 4exu_A Mitogen-activated prote 100.0 1.1E-31 3.7E-36 291.2 17.5 241 430-681 46-323 (371)
227 2fst_X Mitogen-activated prote 100.0 4.6E-32 1.6E-36 293.4 14.2 241 430-681 33-311 (367)
228 3q5i_A Protein kinase; CDPK, m 100.0 6.1E-32 2.1E-36 305.2 15.7 234 430-681 40-301 (504)
229 1zy4_A Serine/threonine-protei 100.0 1.4E-31 4.6E-36 281.0 16.6 238 429-681 9-283 (303)
230 3aln_A Dual specificity mitoge 100.0 1E-31 3.6E-36 285.9 15.6 237 431-681 27-285 (327)
231 3cek_A Dual specificity protei 100.0 1.3E-31 4.5E-36 283.3 15.9 236 430-682 32-293 (313)
232 3e3p_A Protein kinase, putativ 100.0 9.3E-32 3.2E-36 290.1 14.9 245 431-681 28-314 (360)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 9.7E-32 3.3E-36 289.2 14.9 247 430-681 15-305 (353)
234 3pfq_A PKC-B, PKC-beta, protei 100.0 7.1E-32 2.4E-36 313.9 14.4 227 430-676 345-587 (674)
235 3fhr_A MAP kinase-activated pr 100.0 1.2E-31 3.9E-36 286.9 14.7 239 432-686 35-294 (336)
236 2eu9_A Dual specificity protei 100.0 4.1E-31 1.4E-35 284.0 18.8 244 429-681 22-333 (355)
237 3coi_A Mitogen-activated prote 100.0 3.4E-31 1.2E-35 285.2 17.8 240 430-681 28-305 (353)
238 2rio_A Serine/threonine-protei 100.0 2.6E-31 8.8E-36 294.2 17.1 237 431-681 20-295 (434)
239 1q8y_A SR protein kinase; tran 100.0 3.7E-31 1.3E-35 286.8 16.1 253 429-690 22-344 (373)
240 2wei_A Calmodulin-domain prote 100.0 3E-31 1E-35 276.9 14.3 238 426-681 22-276 (287)
241 3p23_A Serine/threonine-protei 100.0 5.8E-31 2E-35 290.8 17.2 235 431-681 29-283 (432)
242 2iwi_A Serine/threonine-protei 100.0 2E-31 6.8E-36 281.7 10.6 227 427-681 32-283 (312)
243 2dyl_A Dual specificity mitoge 100.0 2.4E-30 8.1E-35 273.9 17.2 234 431-681 30-283 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 7.2E-31 2.5E-35 299.8 13.1 256 428-690 16-311 (676)
245 3a99_A Proto-oncogene serine/t 100.0 2.4E-31 8.2E-36 282.4 7.4 225 429-681 46-293 (320)
246 2pzi_A Probable serine/threoni 100.0 4.2E-30 1.4E-34 300.6 16.0 227 429-689 83-329 (681)
247 3uqc_A Probable conserved tran 100.0 1.4E-30 4.8E-35 271.9 10.3 224 429-691 34-268 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 2.4E-29 8.2E-34 276.6 14.1 224 431-681 83-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 5.6E-29 1.9E-33 261.4 15.7 209 432-681 24-256 (299)
250 2vuw_A Serine/threonine-protei 99.9 1.1E-28 3.7E-33 263.7 8.1 233 427-680 21-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 5.1E-24 1.7E-28 242.6 5.3 180 433-616 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.8 6E-22 2E-26 224.3 4.9 180 431-616 341-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.7 1E-17 3.5E-22 173.8 6.8 135 431-589 95-252 (282)
254 1zth_A RIO1 serine protein kin 99.5 3.3E-14 1.1E-18 145.4 8.4 127 431-563 52-219 (258)
255 3rgz_A Protein brassinosteroid 99.4 2.3E-13 7.9E-18 161.1 5.0 124 233-365 624-751 (768)
256 2jwp_A Malectin, MGC80075; sug 99.3 1.6E-12 5.4E-17 124.0 7.5 147 83-245 5-171 (174)
257 4gyi_A RIO2 kinase; protein ki 99.2 2.3E-12 7.8E-17 137.5 0.7 129 430-562 99-264 (397)
258 3rgz_A Protein brassinosteroid 99.1 5.2E-11 1.8E-15 140.9 8.4 81 274-354 632-715 (768)
259 1ogq_A PGIP-2, polygalacturona 99.1 5.6E-11 1.9E-15 124.9 7.4 150 174-343 38-195 (313)
260 3oja_A Leucine-rich immune mol 99.1 2.1E-11 7.2E-16 136.3 2.6 69 273-343 190-259 (487)
261 1ogq_A PGIP-2, polygalacturona 99.0 9.2E-11 3.1E-15 123.3 5.4 103 250-353 25-135 (313)
262 4eco_A Uncharacterized protein 99.0 1.7E-10 5.7E-15 133.5 6.3 32 171-202 66-100 (636)
263 3g39_A Variable lymphocyte rec 99.0 6.6E-10 2.3E-14 105.6 9.2 100 259-358 9-117 (170)
264 4eco_A Uncharacterized protein 99.0 3.7E-10 1.3E-14 130.6 6.1 99 251-354 59-260 (636)
265 1w8a_A SLIT protein; signaling 99.0 1.1E-09 3.8E-14 106.3 8.3 84 274-357 54-140 (192)
266 2v70_A SLIT-2, SLIT homolog 2 98.9 9.2E-10 3.1E-14 109.3 7.8 127 223-358 37-168 (220)
267 4ecn_A Leucine-rich repeat pro 98.9 8.7E-10 3E-14 130.7 7.8 121 233-354 440-584 (876)
268 4fcg_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 112.1 10.9 116 222-347 187-302 (328)
269 2ifg_A High affinity nerve gro 98.9 1.8E-09 6.1E-14 115.0 8.3 100 259-358 8-118 (347)
270 4fcg_A Uncharacterized protein 98.9 1.4E-09 4.8E-14 115.0 6.7 122 220-342 129-273 (328)
271 4ecn_A Leucine-rich repeat pro 98.9 1.1E-09 3.8E-14 129.7 6.5 89 262-354 315-502 (876)
272 2v9t_B SLIT homolog 2 protein 98.9 2.1E-09 7.3E-14 106.6 7.5 127 222-358 36-167 (220)
273 3e6j_A Variable lymphocyte rec 98.9 4.2E-09 1.4E-13 105.2 9.5 104 251-354 11-123 (229)
274 2r9u_A Variable lymphocyte rec 98.9 4.5E-09 1.6E-13 100.2 8.9 86 273-358 32-120 (174)
275 1w8a_A SLIT protein; signaling 98.9 3.2E-09 1.1E-13 103.0 7.8 111 222-341 33-145 (192)
276 3e6j_A Variable lymphocyte rec 98.9 4.5E-09 1.5E-13 105.0 8.9 127 222-358 44-174 (229)
277 2wfh_A SLIT homolog 2 protein 98.8 9E-09 3.1E-13 99.9 8.9 85 274-358 54-141 (193)
278 3tm0_A Aminoglycoside 3'-phosp 98.8 4.6E-09 1.6E-13 107.0 6.2 81 431-511 19-100 (263)
279 3m19_A Variable lymphocyte rec 98.8 1.5E-08 5.1E-13 102.6 9.4 86 273-358 106-194 (251)
280 2v70_A SLIT-2, SLIT homolog 2 98.7 1.5E-08 5.3E-13 100.4 7.9 112 220-340 59-171 (220)
281 2o6r_A Variable lymphocyte rec 98.7 2.5E-08 8.5E-13 95.1 9.0 95 259-353 7-110 (177)
282 2o6s_A Variable lymphocyte rec 98.7 3.2E-08 1.1E-12 97.0 10.0 126 223-357 33-162 (208)
283 2wfh_A SLIT homolog 2 protein 98.7 3E-08 1E-12 96.2 9.3 95 259-354 10-113 (193)
284 3rfs_A Internalin B, repeat mo 98.7 3E-08 1E-12 101.6 9.8 129 221-358 88-220 (272)
285 2o6r_A Variable lymphocyte rec 98.7 4.1E-08 1.4E-12 93.6 9.4 84 274-357 52-138 (177)
286 1p9a_G Platelet glycoprotein I 98.7 3.8E-08 1.3E-12 102.0 9.5 129 220-358 79-210 (290)
287 4g8a_A TOLL-like receptor 4; l 98.7 2.2E-08 7.5E-13 115.2 8.0 86 273-358 493-582 (635)
288 3v47_A TOLL-like receptor 5B a 98.6 3E-08 1E-12 109.4 7.9 129 221-358 278-410 (455)
289 1ozn_A Reticulon 4 receptor; N 98.6 3.6E-08 1.2E-12 101.7 8.0 128 222-358 109-240 (285)
290 2o6s_A Variable lymphocyte rec 98.6 5.9E-08 2E-12 95.1 8.9 96 258-353 6-110 (208)
291 3g39_A Variable lymphocyte rec 98.6 4.8E-08 1.6E-12 92.6 7.8 66 274-339 54-119 (170)
292 4b8c_D Glucose-repressible alc 98.6 3.1E-08 1.1E-12 115.9 7.7 112 220-343 226-337 (727)
293 2v9t_B SLIT homolog 2 protein 98.6 6.3E-08 2.2E-12 95.9 8.5 81 274-354 56-139 (220)
294 3m19_A Variable lymphocyte rec 98.6 8.9E-08 3E-12 96.8 9.3 124 222-354 39-166 (251)
295 2je0_A Acidic leucine-rich nuc 98.6 1.5E-08 5.1E-13 93.7 2.6 97 232-339 33-130 (149)
296 2r9u_A Variable lymphocyte rec 98.6 9.5E-08 3.2E-12 90.9 8.2 67 273-339 56-122 (174)
297 1dce_A Protein (RAB geranylger 98.6 5.4E-08 1.9E-12 110.4 6.9 78 274-354 463-544 (567)
298 2o6q_A Variable lymphocyte rec 98.6 9.7E-08 3.3E-12 97.7 8.1 62 275-336 134-195 (270)
299 2o6q_A Variable lymphocyte rec 98.5 1.6E-07 5.4E-12 96.1 9.6 123 222-353 65-191 (270)
300 4ezg_A Putative uncharacterize 98.5 1.6E-07 5.3E-12 91.3 9.0 121 222-353 70-191 (197)
301 2ell_A Acidic leucine-rich nuc 98.5 5.8E-08 2E-12 91.6 5.5 98 231-339 39-137 (168)
302 2je0_A Acidic leucine-rich nuc 98.5 1.6E-07 5.6E-12 86.5 7.9 66 274-341 17-83 (149)
303 3vq2_A TLR4, TOLL-like recepto 98.5 8.1E-08 2.8E-12 110.2 6.7 84 274-358 473-560 (606)
304 1nd4_A Aminoglycoside 3'-phosp 98.5 9.4E-08 3.2E-12 96.8 6.4 72 435-509 29-103 (264)
305 2z66_A Variable lymphocyte rec 98.5 1E-07 3.5E-12 99.3 6.7 84 274-357 175-262 (306)
306 4ezg_A Putative uncharacterize 98.5 1.8E-07 6.2E-12 90.8 7.8 119 222-353 48-169 (197)
307 1dce_A Protein (RAB geranylger 98.5 1.4E-07 4.6E-12 107.1 7.6 75 275-354 442-519 (567)
308 3zyj_A Leucine-rich repeat-con 98.5 1.7E-07 5.9E-12 103.1 8.2 87 272-358 205-294 (440)
309 3t6q_A CD180 antigen; protein- 98.5 1.2E-07 4.1E-12 108.7 7.2 84 274-358 476-562 (606)
310 3zyi_A Leucine-rich repeat-con 98.5 1.8E-07 6.3E-12 103.2 8.3 87 272-358 216-305 (452)
311 3j0a_A TOLL-like receptor 5; m 98.5 4.7E-08 1.6E-12 116.8 3.5 84 273-358 479-562 (844)
312 2xot_A Amphoterin-induced prot 98.5 1E-07 3.5E-12 102.0 5.9 127 222-358 68-204 (361)
313 3rfs_A Internalin B, repeat mo 98.5 3.3E-07 1.1E-11 93.8 9.5 111 235-354 79-192 (272)
314 2z63_A TOLL-like receptor 4, v 98.5 1.2E-07 4E-12 107.8 6.4 86 273-358 444-533 (570)
315 2ifg_A High affinity nerve gro 98.5 1.6E-07 5.6E-12 99.7 7.0 97 232-339 23-120 (347)
316 4b8c_D Glucose-repressible alc 98.5 8.2E-08 2.8E-12 112.4 5.0 109 233-354 216-327 (727)
317 2xot_A Amphoterin-induced prot 98.4 2.7E-07 9.3E-12 98.7 7.5 122 223-353 44-173 (361)
318 2ell_A Acidic leucine-rich nuc 98.4 2.2E-07 7.5E-12 87.6 6.0 80 272-353 22-105 (168)
319 2z81_A CD282 antigen, TOLL-lik 98.4 3E-07 1E-11 104.0 7.6 96 258-354 3-109 (549)
320 1p9a_G Platelet glycoprotein I 98.4 4.6E-07 1.6E-11 93.7 8.1 80 274-353 100-182 (290)
321 1wwl_A Monocyte differentiatio 98.4 1.9E-07 6.6E-12 97.7 5.2 129 221-354 98-239 (312)
322 2z62_A TOLL-like receptor 4, v 98.4 4.9E-07 1.7E-11 92.6 7.9 63 274-336 76-138 (276)
323 2z66_A Variable lymphocyte rec 98.4 2.5E-07 8.7E-12 96.3 5.8 82 273-354 149-234 (306)
324 1ozn_A Reticulon 4 receptor; N 98.4 5.6E-07 1.9E-11 92.6 8.3 123 222-353 84-211 (285)
325 4g8a_A TOLL-like receptor 4; l 98.4 4.7E-07 1.6E-11 104.0 8.3 63 274-336 100-162 (635)
326 3oja_A Leucine-rich immune mol 98.3 1.2E-07 4.1E-12 105.8 2.8 32 463-494 321-352 (487)
327 3oja_B Anopheles plasmodium-re 98.3 5.5E-07 1.9E-11 103.1 8.4 80 274-353 123-202 (597)
328 1xku_A Decorin; proteoglycan, 98.3 8E-07 2.7E-11 93.6 8.9 62 275-337 217-278 (330)
329 3v47_A TOLL-like receptor 5B a 98.3 3.8E-07 1.3E-11 100.5 6.6 113 219-340 300-413 (455)
330 3vq2_A TLR4, TOLL-like recepto 98.3 5.5E-07 1.9E-11 103.2 7.9 114 221-343 59-174 (606)
331 3oja_B Anopheles plasmodium-re 98.3 4.8E-07 1.6E-11 103.6 7.2 123 223-354 56-182 (597)
332 2z62_A TOLL-like receptor 4, v 98.3 4.3E-07 1.5E-11 93.0 5.8 67 274-340 100-167 (276)
333 1xku_A Decorin; proteoglycan, 98.3 1E-06 3.5E-11 92.7 8.8 95 258-353 30-131 (330)
334 2id5_A Lingo-1, leucine rich r 98.3 8.2E-07 2.8E-11 98.6 8.0 85 274-358 248-335 (477)
335 2z7x_B TOLL-like receptor 1, v 98.3 1E-06 3.4E-11 99.0 8.7 67 274-340 324-392 (520)
336 4glp_A Monocyte differentiatio 98.3 6E-07 2.1E-11 93.7 6.4 76 275-353 225-304 (310)
337 3a79_B TLR6, VLRB.59, TOLL-lik 98.3 3.1E-06 1.1E-10 96.1 12.8 67 274-340 353-421 (562)
338 2ft3_A Biglycan; proteoglycan, 98.3 1E-06 3.5E-11 92.9 8.1 95 259-354 33-134 (332)
339 3dxp_A Putative acyl-COA dehyd 98.3 7E-07 2.4E-11 95.3 6.9 78 432-509 44-129 (359)
340 1wwl_A Monocyte differentiatio 98.3 4.8E-07 1.7E-11 94.6 5.1 62 274-335 201-266 (312)
341 3j0a_A TOLL-like receptor 5; m 98.3 8E-07 2.7E-11 106.1 7.5 125 220-353 50-184 (844)
342 2z80_A TOLL-like receptor 2, v 98.3 1.2E-06 4.1E-11 93.2 8.1 99 255-354 26-135 (353)
343 1ziw_A TOLL-like receptor 3; i 98.3 2.1E-06 7.2E-11 99.8 10.5 85 273-358 535-624 (680)
344 3zyi_A Leucine-rich repeat-con 98.2 1.3E-06 4.3E-11 96.4 8.0 83 272-354 73-158 (452)
345 3o6n_A APL1; leucine-rich repe 98.2 1.3E-06 4.5E-11 94.2 7.8 66 274-340 93-159 (390)
346 1a9n_A U2A', U2A'; complex (nu 98.2 8.3E-07 2.8E-11 84.4 5.0 60 275-336 43-102 (176)
347 2xwt_C Thyrotropin receptor; s 98.2 1E-06 3.5E-11 88.2 5.9 64 274-339 80-148 (239)
348 2ft3_A Biglycan; proteoglycan, 98.2 9.1E-07 3.1E-11 93.3 5.5 66 274-340 217-282 (332)
349 1jl5_A Outer protein YOPM; leu 98.2 1.4E-06 4.9E-11 96.0 7.2 77 273-353 90-183 (454)
350 3o6n_A APL1; leucine-rich repe 98.2 2.5E-06 8.5E-11 92.0 8.6 122 222-353 73-196 (390)
351 2z7x_B TOLL-like receptor 1, v 98.2 1.3E-06 4.6E-11 98.0 6.4 123 220-354 23-149 (520)
352 2z81_A CD282 antigen, TOLL-lik 98.2 1.3E-06 4.5E-11 98.7 6.1 110 221-339 29-140 (549)
353 2id5_A Lingo-1, leucine rich r 98.1 2.5E-06 8.6E-11 94.6 7.9 67 273-339 31-97 (477)
354 2z63_A TOLL-like receptor 4, v 98.1 1.7E-06 5.7E-11 98.2 6.6 68 273-340 469-536 (570)
355 3t6q_A CD180 antigen; protein- 98.1 2.4E-06 8.1E-11 97.9 7.2 81 274-354 57-140 (606)
356 1a9n_A U2A', U2A'; complex (nu 98.1 2.3E-06 7.9E-11 81.2 5.9 63 273-336 63-127 (176)
357 3o53_A Protein LRIM1, AGAP0063 98.1 2.6E-06 8.8E-11 89.2 6.3 58 275-335 170-227 (317)
358 1ziw_A TOLL-like receptor 3; i 98.1 4.2E-06 1.4E-10 97.3 8.7 125 220-353 51-181 (680)
359 2xwt_C Thyrotropin receptor; s 98.1 3E-06 1E-10 84.7 6.2 78 274-352 155-235 (239)
360 3a79_B TLR6, VLRB.59, TOLL-lik 98.1 3.4E-06 1.2E-10 95.8 7.5 77 274-353 76-156 (562)
361 3rw6_A Nuclear RNA export fact 98.1 1.8E-06 6E-11 87.5 4.3 64 274-339 170-237 (267)
362 4fmz_A Internalin; leucine ric 98.1 4.7E-06 1.6E-10 88.2 7.8 80 273-354 264-344 (347)
363 3zyj_A Leucine-rich repeat-con 98.1 4.6E-06 1.6E-10 91.6 7.9 82 272-353 62-146 (440)
364 3g06_A SSPH2 (leucine-rich rep 98.0 5E-06 1.7E-10 95.1 7.3 68 273-345 240-307 (622)
365 3d1u_A Putative fructosamine-3 98.0 7.4E-06 2.5E-10 84.4 7.7 73 432-508 21-97 (288)
366 3cvr_A Invasion plasmid antige 98.0 8E-06 2.7E-10 92.3 8.4 110 220-354 82-191 (571)
367 3cvr_A Invasion plasmid antige 98.0 4.6E-06 1.6E-10 94.3 6.3 66 274-344 180-252 (571)
368 1m9s_A Internalin B; cell inva 98.0 1.4E-05 4.8E-10 91.1 10.1 60 274-337 131-190 (605)
369 1h6t_A Internalin B; cell adhe 98.0 1.5E-05 5.1E-10 82.3 9.4 58 275-336 135-192 (291)
370 1xeu_A Internalin C; cellular 98.0 1.5E-05 5.1E-10 81.0 8.9 116 220-354 65-183 (263)
371 3sg8_A APH(2'')-ID; antibiotic 98.0 5.9E-06 2E-10 85.9 5.9 174 432-617 26-288 (304)
372 4glp_A Monocyte differentiatio 97.9 5.2E-06 1.8E-10 86.5 5.0 63 274-336 117-183 (310)
373 2z80_A TOLL-like receptor 2, v 97.9 6.2E-06 2.1E-10 87.6 5.4 58 274-332 100-159 (353)
374 1h6u_A Internalin H; cell adhe 97.9 2.2E-05 7.4E-10 81.8 9.2 77 274-354 129-206 (308)
375 1jl5_A Outer protein YOPM; leu 97.9 2.2E-05 7.6E-10 86.5 9.0 18 318-335 191-208 (454)
376 1m9s_A Internalin B; cell inva 97.9 1.7E-05 5.9E-10 90.4 8.2 62 274-339 109-170 (605)
377 1h6u_A Internalin H; cell adhe 97.9 1.4E-05 4.6E-10 83.3 6.6 117 222-354 111-228 (308)
378 3o53_A Protein LRIM1, AGAP0063 97.9 3.9E-06 1.3E-10 87.9 2.4 63 274-338 34-96 (317)
379 3g06_A SSPH2 (leucine-rich rep 97.9 4.5E-05 1.5E-09 87.2 11.2 72 274-354 221-295 (622)
380 1h6t_A Internalin B; cell adhe 97.8 2.1E-05 7.3E-10 81.1 7.6 118 221-354 71-189 (291)
381 4gkh_A Aminoglycoside 3'-phosp 97.8 4.2E-05 1.4E-09 77.7 9.6 75 434-511 32-110 (272)
382 1ds9_A Outer arm dynein; leuci 97.8 3.6E-07 1.2E-11 88.8 -6.0 60 274-336 70-129 (198)
383 3bz5_A Internalin-J, INLJ; leu 97.8 3.9E-05 1.3E-09 84.6 9.5 59 274-338 106-164 (457)
384 1xeu_A Internalin C; cellular 97.8 2.4E-05 8.1E-10 79.5 7.0 59 274-337 63-121 (263)
385 1o6v_A Internalin A; bacterial 97.8 3E-05 1E-09 85.7 8.4 62 274-339 309-370 (466)
386 3bz5_A Internalin-J, INLJ; leu 97.8 3E-05 1E-09 85.5 8.3 78 274-354 212-297 (457)
387 1o6v_A Internalin A; bacterial 97.7 6.3E-05 2.2E-09 83.1 8.7 62 274-339 265-326 (466)
388 4ay9_X Follicle-stimulating ho 97.7 2.3E-05 7.9E-10 83.1 4.7 94 259-353 9-114 (350)
389 2ca6_A RAN GTPase-activating p 97.7 9.3E-06 3.2E-10 87.4 1.5 81 274-354 216-314 (386)
390 3goz_A Leucine-rich repeat-con 97.7 7.7E-06 2.6E-10 87.3 0.5 66 275-340 52-127 (362)
391 4fmz_A Internalin; leucine ric 97.6 9.3E-05 3.2E-09 78.1 8.7 78 273-354 242-322 (347)
392 2ast_B S-phase kinase-associat 97.6 1.5E-05 5.1E-10 83.8 1.2 63 274-336 93-157 (336)
393 1ds9_A Outer arm dynein; leuci 97.5 3.9E-06 1.3E-10 81.3 -3.3 60 274-336 48-107 (198)
394 2ca6_A RAN GTPase-activating p 97.5 2.4E-05 8.3E-10 84.1 2.4 64 274-337 187-259 (386)
395 3rw6_A Nuclear RNA export fact 97.5 2.9E-05 9.9E-10 78.6 1.6 78 279-357 148-233 (267)
396 4ay9_X Follicle-stimulating ho 97.5 0.00021 7E-09 75.7 8.3 81 274-355 154-235 (350)
397 3r70_A Aminoglycoside phosphot 97.4 0.00031 1.1E-08 73.3 9.3 69 432-509 43-115 (320)
398 3ovc_A Hygromycin-B 4-O-kinase 97.4 0.0012 4E-08 70.3 12.7 73 432-509 47-122 (362)
399 2ast_B S-phase kinase-associat 97.4 4.6E-05 1.6E-09 80.0 1.7 69 274-343 70-139 (336)
400 3goz_A Leucine-rich repeat-con 97.3 6.8E-05 2.3E-09 79.8 2.7 67 274-340 22-98 (362)
401 3tdw_A Gentamicin resistance p 97.2 0.0019 6.5E-08 66.9 11.6 74 432-510 25-102 (306)
402 1z7x_W Ribonuclease inhibitor; 96.9 0.00016 5.5E-09 79.4 0.7 81 274-354 313-409 (461)
403 2olc_A MTR kinase, methylthior 96.9 0.0019 6.4E-08 69.5 9.1 73 432-506 36-120 (397)
404 3f7w_A Putative fructosamine-3 96.9 0.0023 7.7E-08 65.6 8.9 73 432-508 21-97 (288)
405 1z7x_W Ribonuclease inhibitor; 96.9 0.00017 5.8E-09 79.2 0.3 80 274-353 284-380 (461)
406 3jr1_A Putative fructosamine-3 96.9 0.0038 1.3E-07 64.7 10.5 74 432-508 42-118 (312)
407 3un9_A NLR family member X1; l 96.8 0.00036 1.2E-08 74.5 1.7 81 274-354 155-250 (372)
408 2q83_A YTAA protein; 2635576, 96.7 0.004 1.4E-07 65.1 9.0 72 433-508 39-118 (346)
409 3ats_A Putative uncharacterize 96.6 0.0015 5.2E-08 69.0 4.9 78 432-509 26-121 (357)
410 3rfe_A Platelet glycoprotein I 96.4 0.0046 1.6E-07 55.1 6.0 56 278-335 12-68 (130)
411 3un9_A NLR family member X1; l 96.3 0.00084 2.9E-08 71.6 0.8 69 274-342 183-259 (372)
412 3ogk_B Coronatine-insensitive 96.2 0.00078 2.7E-08 76.5 -0.3 61 275-335 437-501 (592)
413 1io0_A Tropomodulin; LRR prote 96.0 0.0018 6.3E-08 61.6 1.4 64 274-337 65-138 (185)
414 2pyw_A Uncharacterized protein 95.9 0.016 5.3E-07 62.8 8.5 72 432-505 40-122 (420)
415 2ppq_A HSK, HK, homoserine kin 95.8 0.015 5.1E-07 60.2 7.7 74 433-508 29-110 (322)
416 2ra8_A Uncharacterized protein 95.5 0.0017 5.9E-08 68.8 -1.1 65 273-337 251-322 (362)
417 3ogk_B Coronatine-insensitive 95.3 0.002 6.8E-08 73.1 -1.4 63 274-336 164-234 (592)
418 3feg_A Choline/ethanolamine ki 95.3 0.012 4.2E-07 62.5 4.9 71 433-508 57-137 (379)
419 1nw1_A Choline kinase (49.2 KD 95.2 0.012 3.9E-07 64.0 4.5 71 432-508 79-159 (429)
420 3dxq_A Choline/ethanolamine ki 95.1 0.011 3.7E-07 60.8 3.5 70 432-508 24-95 (301)
421 2p1m_B Transport inhibitor res 94.8 0.0037 1.2E-07 70.8 -1.1 63 274-337 432-496 (594)
422 1io0_A Tropomodulin; LRR prote 94.7 0.0059 2E-07 58.0 0.3 62 274-335 93-164 (185)
423 3rfe_A Platelet glycoprotein I 94.6 0.035 1.2E-06 49.2 5.0 39 272-311 29-68 (130)
424 2p1m_B Transport inhibitor res 94.3 0.005 1.7E-07 69.7 -1.5 60 274-333 130-195 (594)
425 2qg7_A Ethanolamine kinase PV0 93.8 0.053 1.8E-06 59.2 5.4 72 432-508 114-188 (458)
426 3csv_A Aminoglycoside phosphot 93.3 0.14 4.9E-06 53.0 7.7 74 433-511 25-102 (333)
427 1zyl_A Hypothetical protein YI 93.3 0.07 2.4E-06 55.2 5.1 72 434-507 34-113 (328)
428 3c5i_A Choline kinase; choline 92.9 0.071 2.4E-06 56.3 4.7 71 433-508 40-121 (369)
429 2jwp_A Malectin, MGC80075; sug 92.5 0.17 6E-06 47.2 6.2 61 10-70 94-171 (174)
430 3f2s_A CK, chetk-alpha, cholin 92.3 0.13 4.3E-06 55.0 5.5 72 433-508 59-158 (401)
431 3sb4_A Hypothetical leucine ri 91.9 0.17 5.6E-06 52.5 5.8 56 274-331 226-283 (329)
432 3i1a_A Spectinomycin phosphotr 91.6 0.47 1.6E-05 49.4 8.8 68 435-508 32-108 (339)
433 3sb4_A Hypothetical leucine ri 90.5 0.25 8.6E-06 51.1 5.4 66 274-342 250-317 (329)
434 3e4g_A ATP synthase subunit S, 90.4 0.059 2E-06 50.4 0.4 62 274-335 61-128 (176)
435 1pgv_A TMD-1, tropomodulin TMD 86.5 0.27 9.2E-06 46.8 2.1 64 274-337 41-113 (197)
436 3mes_A Choline kinase; malaria 82.8 0.8 2.7E-05 49.2 4.0 71 433-508 77-157 (424)
437 1pgv_A TMD-1, tropomodulin TMD 81.4 0.52 1.8E-05 44.8 1.7 59 274-332 70-136 (197)
438 2ra8_A Uncharacterized protein 80.0 0.47 1.6E-05 49.9 1.0 59 273-333 278-341 (362)
439 3e4g_A ATP synthase subunit S, 79.1 0.24 8.1E-06 46.3 -1.5 60 274-333 85-150 (176)
440 2yle_A Protein spire homolog 1 76.7 5.7 0.0002 38.1 7.3 156 506-688 33-201 (229)
441 3g15_A CK, chetk-alpha, cholin 75.2 2.8 9.4E-05 44.6 5.3 28 535-562 247-280 (401)
442 3cxl_A N-chimerin; SH2, RHO-GA 68.7 0.45 1.6E-05 51.9 -2.8 58 431-491 147-214 (463)
443 4ann_A ESSB; membrane protein, 64.8 27 0.00094 33.2 9.1 108 479-618 43-159 (215)
444 4fdw_A Leucine rich hypothetic 61.6 7.4 0.00025 41.2 5.1 58 274-332 271-333 (401)
445 4fdw_A Leucine rich hypothetic 60.6 8.4 0.00029 40.8 5.3 56 275-332 158-213 (401)
446 4ano_A ESSB; membrane protein, 38.4 62 0.0021 30.8 6.8 105 479-617 48-163 (219)
447 2k3u_B C5AR(P7-28S) peptide, c 35.2 9.3 0.00032 21.9 0.3 9 2-10 6-14 (26)
448 4h09_A Hypothetical leucine ri 33.2 32 0.0011 35.5 4.4 55 275-331 264-319 (379)
449 4fs7_A Uncharacterized protein 31.5 32 0.0011 35.8 4.0 54 275-332 298-353 (394)
450 4gt6_A Cell surface protein; l 30.3 55 0.0019 34.0 5.6 53 275-331 289-343 (394)
451 2ks1_B Epidermal growth factor 26.5 8 0.00027 26.7 -1.2 7 397-403 33-39 (44)
452 4h09_A Hypothetical leucine ri 25.3 70 0.0024 32.8 5.3 53 275-330 287-341 (379)
453 4fs7_A Uncharacterized protein 25.3 79 0.0027 32.8 5.7 35 294-330 293-328 (394)
454 1nrp_R Receptor based peptide 22.7 26 0.0009 20.0 0.7 16 96-111 6-21 (26)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.5e-47 Score=404.51 Aligned_cols=245 Identities=27% Similarity=0.409 Sum_probs=193.1
Q ss_pred hhhhccccCcEEEEEEEEC-------CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLD-------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|++. +..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3578999999999999863 458999999988777788999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCC-------------CCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEEEeccC
Q 004935 503 MANGNLQALLLGEE-------------ADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGL 559 (723)
Q Consensus 503 ~~~gsL~~~l~~~~-------------~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl~DfGl 559 (723)
|++|+|.++++... ...++|..++.++.++|. |||||||+||||++++.+||+|||+
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGl 204 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEccccc
Confidence 99999999997642 235889888888877765 9999999999999999999999999
Q ss_pred ccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCc
Q 004935 560 SRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDI 638 (723)
Q Consensus 560 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 638 (723)
++....... ........||+.|||||.+.+..++.++|||||||+||||+| |+.||...... +.+.... .+..
T Consensus 205 a~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~i~-~g~~ 278 (329)
T 4aoj_A 205 SRDIYSTDY-YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----EAIDCIT-QGRE 278 (329)
T ss_dssp ----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH----HHHHHHH-HTCC
T ss_pred ceeccCCCc-ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH----HHHHHHH-cCCC
Confidence 987643322 223345679999999999999999999999999999999999 89999765432 2222221 1111
Q ss_pred ccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 639 ESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 639 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
+... ......+.+++.+||+.+|++||||+||++.|+.+.+.
T Consensus 279 -----~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 279 -----LERP----RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp -----CCCC----TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----CCCc----ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1111 12234678999999999999999999999999987653
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.3e-48 Score=408.59 Aligned_cols=246 Identities=22% Similarity=0.365 Sum_probs=197.6
Q ss_pred HHHHhhhhccccCcEEEEEEEEC-------CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceE
Q 004935 426 ITNNFERVLGNGGFGTVYHGYLD-------GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRG 497 (723)
Q Consensus 426 ~t~~f~~~lG~G~~g~Vy~~~~~-------~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 497 (723)
.+..|.+.||+|+||.||+|.+. ++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+.+..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34457789999999999999872 4589999997653 334578999999999999999999999999999999
Q ss_pred EEEEeCCCCCHHHHhccCC--------------CCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEE
Q 004935 498 LIYEFMANGNLQALLLGEE--------------ADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAK 553 (723)
Q Consensus 498 lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~k 553 (723)
||||||++|+|.++|..+. ...++|..++.++.++|. |||||||+||||++++++|
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEE
Confidence 9999999999999996532 235888888888877765 9999999999999999999
Q ss_pred EEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHH
Q 004935 554 IADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFM 632 (723)
Q Consensus 554 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~ 632 (723)
|+|||+++....... ........||+.|||||.+.++.++.++|||||||+||||+| |+.||.+.... +.+. .
T Consensus 186 i~DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----~~~~-~ 259 (308)
T 4gt4_A 186 ISDLGLFREVYAADY-YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----DVVE-M 259 (308)
T ss_dssp ECCSCCBCGGGGGGC-BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH----HHHH-H
T ss_pred ECCcccceeccCCCc-eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH----HHHH-H
Confidence 999999987643221 223345679999999999999999999999999999999999 89999765432 2222 2
Q ss_pred hcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 004935 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNES 686 (723)
Q Consensus 633 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~ 686 (723)
+..+.... .+.++...+.+++.+||+.+|++||||+||++.|+..
T Consensus 260 i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 IRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22222111 1122344678999999999999999999999999854
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-47 Score=400.96 Aligned_cols=244 Identities=27% Similarity=0.425 Sum_probs=197.7
Q ss_pred hhhhccccCcEEEEEEEEC-------CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLD-------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|++. +..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 4678999999999999863 458999999988777788999999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccC-----------CCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEEEeccCcc
Q 004935 503 MANGNLQALLLGE-----------EADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSR 561 (723)
Q Consensus 503 ~~~gsL~~~l~~~-----------~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl~DfGla~ 561 (723)
|++|+|.++|+.. ....++|..++.++.++|. |||||||+||||++++.+||+|||+|+
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~ 176 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccce
Confidence 9999999999753 2346888888888777765 999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCccc
Q 004935 562 TFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIES 640 (723)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (723)
....... ........||+.|||||.+.+..++.++|||||||+||||+| |+.||...... +.+... ..+...
T Consensus 177 ~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~i-~~~~~~- 249 (299)
T 4asz_A 177 DVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIECI-TQGRVL- 249 (299)
T ss_dssp HHTGGGC-EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHHH-HHTCCC-
T ss_pred ecCCCCc-eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHH-HcCCCC-
Confidence 7543221 222334568999999999999999999999999999999999 89999765432 222222 122111
Q ss_pred ccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 641 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
.. +......+.+++.+||+.+|++||||+||++.|+++.+
T Consensus 250 ----~~----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 250 ----QR----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp ----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CC----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11 11233467899999999999999999999999987654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=393.50 Aligned_cols=244 Identities=28% Similarity=0.478 Sum_probs=187.4
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||+||+|++.+ .||||+++.. .....++|.+|+++|++++|||||+++|+|.+ +..+||||||++|+
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs 117 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred EeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence 46789999999999999765 6999998754 34556789999999999999999999999865 56899999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.++++... ..++|..++.++.++|. |||||||+||||++++++||+|||+|+....... ........
T Consensus 118 L~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-~~~~~~~~ 195 (307)
T 3omv_A 118 LYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-SQQVEQPT 195 (307)
T ss_dssp HHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------CC
T ss_pred HHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc-ceeecccc
Confidence 999997643 34788877777766665 9999999999999999999999999987643222 23344568
Q ss_pred CCCcccccccccc---CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 578 GTPGYLDPEYYIS---NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 578 gt~~y~aPE~~~~---~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
||+.|||||++.+ +.++.++|||||||+||||+||+.||........+.. ....+. ..|.+. ....++
T Consensus 196 GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~----~~~~~~----~~p~~~-~~~~~~ 266 (307)
T 3omv_A 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF----MVGRGY----ASPDLS-KLYKNC 266 (307)
T ss_dssp CCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH----HHHTTC----CCCCST-TSCTTS
T ss_pred cCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHH----HHhcCC----CCCCcc-cccccc
Confidence 9999999999864 4589999999999999999999999976543222222 222211 112111 112233
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVMELNES 686 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~ 686 (723)
...+.+++.+||+.+|++||||+||++.|+.+
T Consensus 267 ~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 267 PKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 45678999999999999999999999998754
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5e-45 Score=390.02 Aligned_cols=248 Identities=29% Similarity=0.430 Sum_probs=197.4
Q ss_pred HhhhhccccCcEEEEEEEECC-------ceEEEEEecCCC-hhhHHHHHHHHHHHHhccC-CceeeEEEEEec-CCceEE
Q 004935 429 NFERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSS-AQGYKQFQAEVELLMRIHH-KNLTTLVGYCDE-GTNRGL 498 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~-------~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~-~~~~~l 498 (723)
.+.+.||+|+||.||+|.+.+ +.||||++.... ....+.|.+|+++|++++| ||||+++|+|.+ ++..++
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i 146 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence 446789999999999998732 479999998654 3446789999999999965 899999999976 456899
Q ss_pred EEEeCCCCCHHHHhccCC--------------CCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEE
Q 004935 499 IYEFMANGNLQALLLGEE--------------ADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKI 554 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl 554 (723)
|||||++|+|.++|+... ...++|..++.++.++|. |||||||+||||++++.+||
T Consensus 147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi 226 (353)
T 4ase_A 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226 (353)
T ss_dssp EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEE
Confidence 999999999999997532 245788888777777665 99999999999999999999
Q ss_pred EeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHh
Q 004935 555 ADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFML 633 (723)
Q Consensus 555 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~ 633 (723)
+|||+|+.+..... ........||+.|||||.+.+..++.++|||||||+||||+| |+.||........+...+.
T Consensus 227 ~DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~--- 302 (353)
T 4ase_A 227 CDFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK--- 302 (353)
T ss_dssp CCCGGGSCTTTCTT-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH---
T ss_pred CcchhhhhcccCCC-ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH---
Confidence 99999997654332 233455678999999999999999999999999999999998 8999976543322322222
Q ss_pred cCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 634 GKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 634 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
.+.. +.... .....+.+++.+||+.||++||||+||++.|+++++..
T Consensus 303 -~g~~-----~~~p~----~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 303 -EGTR-----MRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp -HTCC-----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -cCCC-----CCCCc----cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 2211 11111 12346789999999999999999999999999988643
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.2e-45 Score=383.07 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=185.9
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCC----ceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT----NRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|+++|+.||||+++..... ...+..|+..+.+++|||||+++|+|.+.+ ..+||||||++
T Consensus 7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 3578999999999999999999999999754322 223455667778899999999999997654 57899999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHHHhcc------------------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 004935 506 GNLQALLLGEEADILSWEGRLRIAIEAA------------------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~~~~a------------------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 567 (723)
|+|.++++.. .++|..+++++.++| .|||||||+||||+.++++||+|||+|+......
T Consensus 86 gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 162 (303)
T 3hmm_A 86 GSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp CBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred CcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC
Confidence 9999999764 367776666555443 2899999999999999999999999998764332
Q ss_pred CCc-eeeecccCCCccccccccccC------CCCChhhHHHHHHHHHHHHcCCCccccCccc----------ccHHHHHH
Q 004935 568 SGT-HVTTTIAGTPGYLDPEYYISN------RLTEKSDVYNFGVVLLEIITSKSVIERTHER----------IHITQWVS 630 (723)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~SfGvvL~elltg~~p~~~~~~~----------~~~~~~~~ 630 (723)
... .......||+.|||||++.+. .++.++|||||||+||||+||+.|+...... ....+.+.
T Consensus 163 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (303)
T 3hmm_A 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242 (303)
T ss_dssp TEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred CceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHH
Confidence 211 122345799999999998754 4678999999999999999998876432211 11112222
Q ss_pred HHhcCCCcccccCCcccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 631 FMLGKGDIESIVDPRLHED-FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 631 ~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
...... ..+|.+... ...+....+.+++.+||+.||++||||+||++.|+++.+.+.
T Consensus 243 ~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 243 KVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 222221 122333222 123466778899999999999999999999999998875543
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1e-43 Score=375.39 Aligned_cols=243 Identities=19% Similarity=0.227 Sum_probs=186.7
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.+.||+|+||.||+|+. +++.||||+++.... +.+|+++|++++|||||++++++.+.+..+||||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 46799999999999998 477999999975432 25799999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCC-cEEEEeccCccccCCCCCCc--eeeec
Q 004935 509 QALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGT--HVTTT 575 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~~--~~~~~ 575 (723)
.+++.... .+++... +..+|+...|||||||+||||+.++ ++||+|||+|+.+....... .....
T Consensus 138 ~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~ 215 (336)
T 4g3f_A 138 GQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215 (336)
T ss_dssp HHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CC
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCc
Confidence 99997542 2343333 3333433449999999999999987 69999999999875432211 12234
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
..||+.|||||.+.+..|+.++|||||||+||||+||+.||............... ..... .+.. ...
T Consensus 216 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~~-----~~~~----~~s 283 (336)
T 4g3f_A 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPIR-----EIPP----SCA 283 (336)
T ss_dssp CCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGGG-----GSCT----TSC
T ss_pred cccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCch-----hcCc----cCC
Confidence 67999999999999999999999999999999999999999876544333332221 10000 1111 223
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
..+.+++.+||+.||.+|||++|+++.|..+++...+
T Consensus 284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~ 320 (336)
T 4g3f_A 284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG 320 (336)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence 4677999999999999999999999999988866554
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=9.2e-44 Score=377.49 Aligned_cols=236 Identities=22% Similarity=0.401 Sum_probs=179.9
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
.+.+.||+|+||.||+|+. +++.||||++... .....+.|.+|+++|++++|||||++++++.+.+..+||||||+
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~ 106 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3467899999999999998 4779999999754 34456789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCC------HHHH----HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILS------WEGR----LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~------~~~~----l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.......++ |..+ +..+|+...|||||||+||||+.++.+||+|||+|+.+... .....
T Consensus 107 gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---~~~~~ 183 (350)
T 4b9d_A 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST---VELAR 183 (350)
T ss_dssp TCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH---HHHHH
T ss_pred CCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC---ccccc
Confidence 99999999765433333 3333 33344444499999999999999999999999999876321 12234
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|||||.+.+..|+.++|||||||+||||+||+.||...... +.+...... .. +.+....
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~~i~~~-~~-----~~~~~~~---- 249 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK----NLVLKIISG-SF-----PPVSLHY---- 249 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHT-CC-----CCCCTTS----
T ss_pred ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHHcC-CC-----CCCCccC----
Confidence 567999999999999999999999999999999999999999765432 222222211 11 1111222
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+||+.||++|||++|+++
T Consensus 250 s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 250 SYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 235779999999999999999999986
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-43 Score=367.08 Aligned_cols=234 Identities=26% Similarity=0.428 Sum_probs=176.4
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEec----CCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE----GTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~lV~E 501 (723)
|.+.||+|+||.||+|.+. +..||+|++... .....+.|.+|+++|++++|||||+++++|.. ....+||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 4567999999999999984 568999998653 34456789999999999999999999999865 345789999
Q ss_pred eCCCCCHHHHhccCCC----CCCCHH----HHHHHHHhcc--ccccCCCCCCEEEcC-CCcEEEEeccCccccCCCCCCc
Q 004935 502 FMANGNLQALLLGEEA----DILSWE----GRLRIAIEAA--KVHRDVKSTNILLSG-KFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~----~~l~~~----~~l~i~~~~a--~vH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~~ 570 (723)
||++|+|.+++..... ....|. ..+..+|... .|||||||+||||+. ++.+||+|||+|+....
T Consensus 110 y~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~----- 184 (290)
T 3fpq_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----- 184 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-----
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-----
Confidence 9999999999975421 112222 2344444444 599999999999984 78999999999986432
Q ss_pred eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
.......||+.|||||.+.+ .|+.++|||||||+||||+||+.||....... ...+ .+..+... +.+....
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~---~~~~-~i~~~~~~----~~~~~~~ 255 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA---QIYR-RVTSGVKP----ASFDKVA 255 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---HHHH-HHTTTCCC----GGGGGCC
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH---HHHH-HHHcCCCC----CCCCccC
Confidence 22345689999999998864 69999999999999999999999997543322 2222 22222111 1111111
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+||+.||++|||++|+++
T Consensus 256 ----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 256 ----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 225779999999999999999999875
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5e-44 Score=378.96 Aligned_cols=236 Identities=20% Similarity=0.284 Sum_probs=183.3
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.+.||+|+||.||+|+. +++.||||++........+.+.+|+++|++++|||||++++++.+.+..+||||||++|+|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999998 4779999999765444456789999999999999999999999999999999999999999
Q ss_pred HHHhccCCC---CCCCH----HHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccCCCc
Q 004935 509 QALLLGEEA---DILSW----EGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPG 581 (723)
Q Consensus 509 ~~~l~~~~~---~~l~~----~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~ 581 (723)
.+++....- .+..+ ...+..+|+...|||||||+||||+.++.+||+|||+|+.+.... .......||+.
T Consensus 159 ~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---~~~~~~~GTp~ 235 (346)
T 4fih_A 159 TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKSLVGTPY 235 (346)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---CCBCCCCSCGG
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC---CcccccccCcC
Confidence 999875421 11122 223344444444999999999999999999999999998764322 23345789999
Q ss_pred cccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHH
Q 004935 582 YLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEI 661 (723)
Q Consensus 582 y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l 661 (723)
|||||.+.+..|+.++|||||||+||||++|+.||....... ........ . .+.+.. .......+.++
T Consensus 236 YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----~~~~i~~~-~-----~~~~~~--~~~~s~~~~dl 303 (346)
T 4fih_A 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK----AMKMIRDN-L-----PPRLKN--LHKVSPSLKGF 303 (346)
T ss_dssp GCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHS-S-----CCCCSC--GGGSCHHHHHH
T ss_pred cCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHHHHcC-C-----CCCCCc--cccCCHHHHHH
Confidence 999999999999999999999999999999999997653321 11111111 0 111110 11122357799
Q ss_pred HHhccCCCCCCCCCHHHHHH
Q 004935 662 AMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 662 ~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.+||+.||++|||++|+++
T Consensus 304 i~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 304 LDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHcCCChhHCcCHHHHhc
Confidence 99999999999999998875
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.9e-43 Score=379.75 Aligned_cols=237 Identities=20% Similarity=0.284 Sum_probs=185.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|+. +++.||||++........+.+.+|+++|++++|||||++++++.+.+..+||||||++|+
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 346899999999999998 477999999987655555678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCC---CCC----CHHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccCCC
Q 004935 508 LQALLLGEEA---DIL----SWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTP 580 (723)
Q Consensus 508 L~~~l~~~~~---~~l----~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~ 580 (723)
|.+++....- .+. +....+.++|+...|||||||+||||+.++.+||+|||+|+.+.... ......+||+
T Consensus 235 L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---~~~~~~~GTp 311 (423)
T 4fie_A 235 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKSLVGTP 311 (423)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---CCBCCCEECT
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC---ccccccccCc
Confidence 9999875421 111 22233444444455999999999999999999999999998764332 2334568999
Q ss_pred ccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHH
Q 004935 581 GYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVE 660 (723)
Q Consensus 581 ~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~ 660 (723)
.|||||.+.+..|+.++|||||||+||||++|+.||...... +........ . .+.+... ......+.+
T Consensus 312 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~~-~-----~~~~~~~--~~~s~~~~d 379 (423)
T 4fie_A 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRDN-L-----PPRLKNL--HKVSPSLKG 379 (423)
T ss_dssp TTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHS-C-----CCCCSCT--TSSCHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----HHHHHHHcC-C-----CCCCccc--ccCCHHHHH
Confidence 999999999999999999999999999999999999765332 111111111 0 1111110 111235779
Q ss_pred HHHhccCCCCCCCCCHHHHHH
Q 004935 661 IAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 661 l~~~Cl~~~p~~RPsm~evl~ 681 (723)
++.+||+.||++|||++|+++
T Consensus 380 li~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 380 FLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHhc
Confidence 999999999999999999876
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.6e-43 Score=366.90 Aligned_cols=237 Identities=20% Similarity=0.301 Sum_probs=185.3
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
+.+.+.||+|+||+||+|+. +++.||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 34568999999999999998 57799999997532 23356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCC----CCCCHHH----HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 503 MANGNLQALLLGEEA----DILSWEG----RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~----~~l~~~~----~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|+|.+++..... .+..+.. .+..+|+...|||||||+||||+.++.+||+|||+|+.+..... .....
T Consensus 114 ~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~-~~~~~ 192 (311)
T 4aw0_A 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARAN 192 (311)
T ss_dssp CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-CCCBC
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC-ccccc
Confidence 999999999975421 1222333 34444444459999999999999999999999999998753322 23345
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
..+||+.|||||.+.+..|+.++||||+||+||||+||+.||...... +....... +. ..+.....
T Consensus 193 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----~~~~~i~~-~~------~~~p~~~s--- 258 (311)
T 4aw0_A 193 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG----LIFAKIIK-LE------YDFPEKFF--- 258 (311)
T ss_dssp CCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH-TC------CCCCTTCC---
T ss_pred CcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHc-CC------CCCCcccC---
Confidence 678999999999999999999999999999999999999999765432 22222211 11 11222222
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVV 680 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl 680 (723)
..+.+++.+||+.||++|||++|++
T Consensus 259 -~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 259 -PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -HHHHHHHHHHccCCHhHCcChHHHc
Confidence 3567999999999999999999864
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-41 Score=350.95 Aligned_cols=233 Identities=20% Similarity=0.331 Sum_probs=168.4
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
.+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..++||||+
T Consensus 16 ~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 95 (275)
T 3hyh_A 16 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95 (275)
T ss_dssp EEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 4567899999999999997 47799999997543 233567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCC----CCCCHHH----HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 504 ANGNLQALLLGEEA----DILSWEG----RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 504 ~~gsL~~~l~~~~~----~~l~~~~----~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
+|+|.+++..... .+..+.. .+..+|+...+||||||+|||+++++++||+|||+|+..... .....
T Consensus 96 -~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~----~~~~~ 170 (275)
T 3hyh_A 96 -GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLKT 170 (275)
T ss_dssp -CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------
T ss_pred -CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC----CccCC
Confidence 6899999876432 1122223 344444444499999999999999999999999999875322 22345
Q ss_pred ccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 576 IAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
..||+.|||||.+.+..+ +.++||||+||+||||+||+.||..... .+..+... .+. +.+....+
T Consensus 171 ~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~----~~~~~~i~-~~~------~~~p~~~s--- 236 (275)
T 3hyh_A 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI----PVLFKNIS-NGV------YTLPKFLS--- 236 (275)
T ss_dssp ----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHH-HTC------CCCCTTSC---
T ss_pred eeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHH-cCC------CCCCCCCC---
Confidence 689999999999998876 5799999999999999999999976432 22222221 111 11111222
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+|++.||++|||++|+++
T Consensus 237 -~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 237 -PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 35679999999999999999999986
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.8e-42 Score=359.13 Aligned_cols=231 Identities=22% Similarity=0.298 Sum_probs=171.3
Q ss_pred HHhhhhccccCcEEEEEEEE-----CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEE
Q 004935 428 NNFERVLGNGGFGTVYHGYL-----DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~-----~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
+.+.+.||+|+||.||+|+. .++.||||+++... .....++.+|+++|++++|||||++++++.+.+..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 34568999999999999986 24589999997542 122346889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhccCCC----CCCCHH----HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 501 EFMANGNLQALLLGEEA----DILSWE----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~----~~l~~~----~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
|||++|+|.+++..... .+..+. ..+..+|+...|||||||+|||++.++.+||+|||+|+...... ..
T Consensus 106 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---~~ 182 (304)
T 3ubd_A 106 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---KK 182 (304)
T ss_dssp CCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--------CC
T ss_pred EcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---cc
Confidence 99999999999976422 122222 33444444445999999999999999999999999998653221 22
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
.....||+.|||||.+.+..++.++||||+||+||||+||+.||...... +....... +. +.+....
T Consensus 183 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~~i~~-~~------~~~p~~~-- 249 (304)
T 3ubd_A 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK----ETMTMILK-AK------LGMPQFL-- 249 (304)
T ss_dssp CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH-CC------CCCCTTS--
T ss_pred ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH----HHHHHHHc-CC------CCCCCcC--
Confidence 34568999999999999999999999999999999999999999765432 22222211 11 1111122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCH
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTM 676 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm 676 (723)
...+.+++.+||+.||++|||+
T Consensus 250 --s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 250 --SPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --CHHHHHHHHHHTCSSGGGSTTC
T ss_pred --CHHHHHHHHHHcccCHHHCCCC
Confidence 2357799999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.7e-40 Score=347.76 Aligned_cols=236 Identities=20% Similarity=0.296 Sum_probs=166.7
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCC------------
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT------------ 494 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------------ 494 (723)
+.+.||+|+||.||+|+. +++.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 457899999999999998 47799999987544 344567999999999999999999999986543
Q ss_pred ceEEEEEeCCCCCHHHHhccCCC-CCCC------HH----HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCcccc
Q 004935 495 NRGLIYEFMANGNLQALLLGEEA-DILS------WE----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF 563 (723)
Q Consensus 495 ~~~lV~Ey~~~gsL~~~l~~~~~-~~l~------~~----~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~ 563 (723)
..++|||||++|+|.+++..... .... +. ..+..+|+...|||||||+||||+.++.+||+|||+|+.+
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~ 168 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceec
Confidence 36899999999999999976532 1122 22 2344444445599999999999999999999999999876
Q ss_pred CCCCCCc---------eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhc
Q 004935 564 PVEGSGT---------HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLG 634 (723)
Q Consensus 564 ~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~ 634 (723)
....... .......||+.|||||.+.+..|+.++|||||||+||||++ ||....+. ...+. ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---~~~~~-~~~ 241 (299)
T 4g31_A 169 DQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---VRTLT-DVR 241 (299)
T ss_dssp -----------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HHHHH-HHH
T ss_pred CCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH---HHHHH-HHh
Confidence 4332211 11234579999999999999999999999999999999997 66432211 11111 111
Q ss_pred CCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 635 KGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 635 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.... |.. ..+....+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~-----p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 242 NLKF-----PPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp TTCC-----CHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCC-----CCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 111 1122234568999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8.3e-39 Score=339.99 Aligned_cols=260 Identities=43% Similarity=0.763 Sum_probs=219.6
Q ss_pred hhhccccCcEEEEEEEEC-CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCHH
Q 004935 431 ERVLGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 509 (723)
.+.||+|+||.||+|.+. ++.||||++........+.+.+|++++++++||||++++++|...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 468999999999999984 6799999998777667788999999999999999999999999999999999999999999
Q ss_pred HHhccCC--CCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 510 ALLLGEE--ADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 510 ~~l~~~~--~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
+++.... ...++|...+.++.+++. +||||||+|||++.++.+||+|||+++....... ........
T Consensus 124 ~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~ 202 (321)
T 2qkw_B 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-THLSTVVK 202 (321)
T ss_dssp GGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-CCCBCCCE
T ss_pred HHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-cccccccC
Confidence 9997653 234677766666555443 9999999999999999999999999986543221 22233456
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCc--ccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTH--ERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
||+.|+|||.+.+..++.++|||||||+++||+||+.||.... +......|.......+.+..++++.+......+..
T Consensus 203 gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (321)
T 2qkw_B 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESL 282 (321)
T ss_dssp EETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHH
T ss_pred CCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHH
Confidence 8999999999999999999999999999999999999997543 23455666666666777888888888877888889
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
..+.+++.+|++.+|++|||++|+++.|++++..+.
T Consensus 283 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 283 RKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999886543
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.2e-38 Score=337.30 Aligned_cols=270 Identities=39% Similarity=0.673 Sum_probs=224.7
Q ss_pred cccCHHHHHHHHHHh--hhhccccCcEEEEEEEE-CCceEEEEEecCCChh-hHHHHHHHHHHHHhccCCceeeEEEEEe
Q 004935 416 QRFSYSNVLRITNNF--ERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQ-GYKQFQAEVELLMRIHHKNLTTLVGYCD 491 (723)
Q Consensus 416 ~~~~~~~l~~~t~~f--~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 491 (723)
..+++.++...+.+| .+.||+|+||.||+|.. +++.||||++...... ....|.+|++++++++||||++++++|.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 467888888777766 47899999999999987 4679999999765422 2346899999999999999999999999
Q ss_pred cCCceEEEEEeCCCCCHHHHhccCC--CCCCCHHHHHHH----------HHhc---cccccCCCCCCEEEcCCCcEEEEe
Q 004935 492 EGTNRGLIYEFMANGNLQALLLGEE--ADILSWEGRLRI----------AIEA---AKVHRDVKSTNILLSGKFQAKIAD 556 (723)
Q Consensus 492 ~~~~~~lV~Ey~~~gsL~~~l~~~~--~~~l~~~~~l~i----------~~~~---a~vH~Dlk~~NILl~~~~~~kl~D 556 (723)
..+..++||||+++|+|.+++.... ...++|..+..+ +|.. ..+||||||+|||++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999998653 234666555444 4444 459999999999999999999999
Q ss_pred ccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCcccc----CcccccHHHHHHHH
Q 004935 557 FGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIER----THERIHITQWVSFM 632 (723)
Q Consensus 557 fGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~----~~~~~~~~~~~~~~ 632 (723)
||+++...... ........||+.|+|||.+.+..++.++|||||||+++||+||+.||.. .........|+...
T Consensus 178 fg~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 178 FGLAKLMDYKD--THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CSSCEECCSSS--SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred CccccccCccc--ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 99998764322 2334456699999999999988999999999999999999999999963 23445677788877
Q ss_pred hcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 004935 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687 (723)
Q Consensus 633 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~ 687 (723)
........+.+..+......+....+.+++.+|++.+|.+|||++||++.|++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 7788888888888888888899999999999999999999999999999998643
No 18
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.6e-37 Score=324.97 Aligned_cols=271 Identities=38% Similarity=0.612 Sum_probs=216.1
Q ss_pred ccccCHHHHHHHHHHhh--------hhccccCcEEEEEEEECCceEEEEEecCCC----hhhHHHHHHHHHHHHhccCCc
Q 004935 415 NQRFSYSNVLRITNNFE--------RVLGNGGFGTVYHGYLDGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKN 482 (723)
Q Consensus 415 ~~~~~~~~l~~~t~~f~--------~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l~H~n 482 (723)
...|++.++.+++.+|. +.||+|+||.||+|..+++.||||++.... ....+.|.+|++++++++|||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 35789999999999986 469999999999999999999999987532 334578999999999999999
Q ss_pred eeeEEEEEecCCceEEEEEeCCCCCHHHHhccC-CCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCc
Q 004935 483 LTTLVGYCDEGTNRGLIYEFMANGNLQALLLGE-EADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQ 551 (723)
Q Consensus 483 Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~ 551 (723)
|+++++++...+..++||||+++|+|.+++... ....+++...+.++.+++ .+||||||+||+++.++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~ 171 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT 171 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCc
Confidence 999999999999999999999999999998743 234567766655554443 399999999999999999
Q ss_pred EEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHH
Q 004935 552 AKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631 (723)
Q Consensus 552 ~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~ 631 (723)
+||+|||+++....... ........|++.|+|||.+.+ .++.++||||||++++||++|+.||........+..+...
T Consensus 172 ~kl~Dfg~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 249 (307)
T 2nru_A 172 AKISDFGLARASEKFAQ-TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249 (307)
T ss_dssp EEECCCTTCEECCSCSS-CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHH
T ss_pred EEEeecccccccccccc-cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHH
Confidence 99999999987643222 223344578999999998764 5899999999999999999999999876554444444333
Q ss_pred HhcC-CCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 632 MLGK-GDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 632 ~~~~-~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
.... ..+...+++.+ ..........+.+++.+|++.+|.+|||+++|++.|+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 250 IEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 3222 22344445444 33456677889999999999999999999999999998753
No 19
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=342.34 Aligned_cols=249 Identities=18% Similarity=0.296 Sum_probs=180.2
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEec------CCceEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDE------GTNRGL 498 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~~l 498 (723)
.+.+.||+|+||.||+|+. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..+|
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~i 136 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYV 136 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEE
Confidence 3467899999999999998 57799999997543 3445678999999999999999999998753 367899
Q ss_pred EEEeCCCCCHHHHhccCCCCCCCH----------HHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 004935 499 IYEFMANGNLQALLLGEEADILSW----------EGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~~~l~~----------~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 568 (723)
|||||+ |+|.+++.... .++. ...+..+|+...|||||||+|||++.++.+||+|||+|+.+.....
T Consensus 137 vmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~ 213 (398)
T 4b99_A 137 VLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213 (398)
T ss_dssp EEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----
T ss_pred EEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcc
Confidence 999996 68999987643 2332 3334455555559999999999999999999999999987643221
Q ss_pred -CceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccc--c-C
Q 004935 569 -GTHVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI--V-D 643 (723)
Q Consensus 569 -~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i--~-d 643 (723)
.........||+.|||||.+.+. .++.++||||+||+++||++|+.||.+......+....... ........ . .
T Consensus 214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~-g~p~~~~~~~~~~ 292 (398)
T 4b99_A 214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL-GTPSPAVIQAVGA 292 (398)
T ss_dssp --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH-CCCCGGGTC----
T ss_pred ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc-CCCChHHhhhhhh
Confidence 12234457899999999998875 46999999999999999999999998765443333332222 11110000 0 0
Q ss_pred C-------ccc--CCCCH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 P-------RLH--EDFDI-----NSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~-------~l~--~~~~~-----~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
. .+. ..... .....+.+++.+||+.||++|||++|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 000 00000 11235679999999999999999999876
No 20
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.9e-38 Score=337.34 Aligned_cols=191 Identities=22% Similarity=0.347 Sum_probs=149.3
Q ss_pred HhhhhccccCcEEEEEEEEC-----CceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEe
Q 004935 429 NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.+.||+|+||.||+|+.. ++.||||++..... ..++.+|+++|+++ +||||+++++++.+.++.++||||
T Consensus 24 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~ 101 (361)
T 4f9c_A 24 KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPY 101 (361)
T ss_dssp EEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEEC
T ss_pred EEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeC
Confidence 34678999999999999862 45899999876542 35688999999998 699999999999999999999999
Q ss_pred CCCCCHHHHhccCC-CCC----CCHHHHHHHHHhccccccCCCCCCEEEcCC-CcEEEEeccCccccCCCCCC-------
Q 004935 503 MANGNLQALLLGEE-ADI----LSWEGRLRIAIEAAKVHRDVKSTNILLSGK-FQAKIADFGLSRTFPVEGSG------- 569 (723)
Q Consensus 503 ~~~gsL~~~l~~~~-~~~----l~~~~~l~i~~~~a~vH~Dlk~~NILl~~~-~~~kl~DfGla~~~~~~~~~------- 569 (723)
|++|+|.+++..-. ..+ .+....+..+|+...|||||||+|||++.+ +.+||+|||+|+........
T Consensus 102 ~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 181 (361)
T 4f9c_A 102 LEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181 (361)
T ss_dssp CCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--
T ss_pred CCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccc
Confidence 99999999985421 111 123334455555555999999999999977 79999999999865322110
Q ss_pred ------------------ceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcc
Q 004935 570 ------------------THVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHE 621 (723)
Q Consensus 570 ------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~ 621 (723)
........||+.|+|||.+.+. .++.++||||+||+++||+||+.||....+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp ------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred cccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 1112345799999999998875 589999999999999999999999965443
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.9e-37 Score=351.72 Aligned_cols=238 Identities=20% Similarity=0.292 Sum_probs=186.1
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.+.||+|+||.||+|.. +++.||+|++........+.+.+|+++|++++|||||++++++.+.+..+||||||++|
T Consensus 160 ~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg 239 (573)
T 3uto_A 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence 4567899999999999998 57799999998777666778999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCC-----CC----CHHHHHHHHHhccccccCCCCCCEEEcCC--CcEEEEeccCccccCCCCCCceeeec
Q 004935 507 NLQALLLGEEAD-----IL----SWEGRLRIAIEAAKVHRDVKSTNILLSGK--FQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 507 sL~~~l~~~~~~-----~l----~~~~~l~i~~~~a~vH~Dlk~~NILl~~~--~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
+|.+++...... +. +....+..+|+...+||||||+|||++.+ +.+||+|||+|+.+... .....
T Consensus 240 ~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~----~~~~~ 315 (573)
T 3uto_A 240 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK----QSVKV 315 (573)
T ss_dssp BHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT----SEEEE
T ss_pred cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC----Cceee
Confidence 999998654221 12 22333445555555999999999999854 89999999999986432 23345
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
..||+.|||||.+.+..|+.++||||+||+||||++|+.||........ ..... .... . .++...... .
T Consensus 316 ~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~-~~~~-~-~~~~~~~~~----s 384 (573)
T 3uto_A 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVK-SCDW-N-MDDSAFSGI----S 384 (573)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHH-TTCC-C-CCSGGGTTS----C
T ss_pred eEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHH-hCCC-C-CCcccccCC----C
Confidence 6799999999999999999999999999999999999999976543221 11111 1110 0 011111112 2
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+||+.||.+|||++|+++
T Consensus 385 ~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 385 EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 35679999999999999999999986
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1e-36 Score=322.09 Aligned_cols=247 Identities=28% Similarity=0.422 Sum_probs=183.9
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|...++.||||++.... ....++|.+|++++++++||||+++++++......++||||+++|+
T Consensus 41 i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 35789999999999999999999999997654 3445689999999999999999999999999999999999999999
Q ss_pred HHHHhccCCC-CCCCHHH----------HHHHHHhcc--ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 508 LQALLLGEEA-DILSWEG----------RLRIAIEAA--KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 508 L~~~l~~~~~-~~l~~~~----------~l~i~~~~a--~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
|.+++..... ..+++.. .+..+|+.. .+||||||+|||++.++.+||+|||+++..... .....
T Consensus 121 L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~---~~~~~ 197 (309)
T 3p86_A 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST---FLSSK 197 (309)
T ss_dssp HHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----------------
T ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc---ccccc
Confidence 9999976432 1244433 344455555 699999999999999999999999999864322 12234
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... +........... ..+... .
T Consensus 198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----~~~~~~~~~~~~-----~~~~~~----~ 264 (309)
T 3p86_A 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVGFKCKR-----LEIPRN----L 264 (309)
T ss_dssp ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHHHSCCC-----CCCCTT----S
T ss_pred cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCC-----CCCCcc----C
Confidence 467899999999999999999999999999999999999999765432 111111111110 111111 2
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
...+.+++.+||+.+|.+|||++++++.|+.++.....
T Consensus 265 ~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 23678999999999999999999999999998865443
No 23
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=324.87 Aligned_cols=247 Identities=23% Similarity=0.370 Sum_probs=190.0
Q ss_pred hhhhccccCcEEEEEEEEC-----CceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|.+. +..||||+++.. .....+.|.+|++++++++||||+++++++...+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 4578999999999999983 336999999865 3445678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... ..+++...+.++.+++ .+||||||+|||++.++.+||+|||+++............
T Consensus 133 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 211 (325)
T 3kul_A 133 ENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211 (325)
T ss_dssp TTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEEC
T ss_pred CCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeec
Confidence 9999999996542 2355555554444433 3999999999999999999999999998765443323333
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
....+|+.|+|||.+.+..++.++|||||||+++||++ |+.||...... +.......... .. ...
T Consensus 212 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~~~~~------~~----~~~ 277 (325)
T 3kul_A 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVISSVEEGYR------LP----APM 277 (325)
T ss_dssp C---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHHHHHHTTCC------CC----CCT
T ss_pred cCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHHcCCC------CC----CCC
Confidence 44456788999999999999999999999999999999 99999765432 11222111111 01 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.....+.+++.+||+.+|.+|||++++++.|+.++....
T Consensus 278 ~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 223467899999999999999999999999999885443
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=317.81 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=191.2
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|... +..||+|++........+.|.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 3578999999999999984 67999999987777778899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc-------
Q 004935 508 LQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT------- 570 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~------- 570 (723)
|.+++.... ..+++...+.++.+++ .+||||||+|||++.++.+||+|||+++.........
T Consensus 94 L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 172 (310)
T 3s95_A 94 LRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172 (310)
T ss_dssp HHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------------
T ss_pred HHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccccc
Confidence 999997642 2356655555544443 3999999999999999999999999998764322110
Q ss_pred ----eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccc-----cHHHHHHHHhcCCCcccc
Q 004935 571 ----HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERI-----HITQWVSFMLGKGDIESI 641 (723)
Q Consensus 571 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~i 641 (723)
.......||+.|+|||.+.+..++.++|||||||+++||++|..|+....... ........
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---------- 242 (310)
T 3s95_A 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR---------- 242 (310)
T ss_dssp -------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH----------
T ss_pred ccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc----------
Confidence 01124579999999999999999999999999999999999999886432211 11111110
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.... .....+.+++.+|++.+|++|||++++++.|+++.....
T Consensus 243 ---~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 243 ---YCPP----NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ---TCCT----TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---cCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111 112257799999999999999999999999998875543
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3e-36 Score=326.73 Aligned_cols=247 Identities=27% Similarity=0.413 Sum_probs=191.9
Q ss_pred hhhhccccCcEEEEEEEEC---------CceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEE
Q 004935 430 FERVLGNGGFGTVYHGYLD---------GTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~---------~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 498 (723)
+.+.||+|+||.||+|... +..||||+++... ....+.+.+|+++++++ +||||++++++|...+..++
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 4578999999999999862 2369999997654 34557899999999999 89999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCC--------------CCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEE
Q 004935 499 IYEFMANGNLQALLLGEE--------------ADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKI 554 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl 554 (723)
||||+++|+|.+++.... ...+.+...+.++.+++ .+||||||+|||++.++.+||
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl 244 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 244 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEE
Confidence 999999999999997643 12356655555444443 399999999999999999999
Q ss_pred EeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHh
Q 004935 555 ADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFML 633 (723)
Q Consensus 555 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~ 633 (723)
+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...... .+...+
T Consensus 245 ~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~---- 318 (370)
T 2psq_A 245 ADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLL---- 318 (370)
T ss_dssp CCCSSCEETTCCCT-TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHH----
T ss_pred ccccCCcccCcccc-eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH----
Confidence 99999986543221 112233457789999999999999999999999999999999 99999765332 222211
Q ss_pred cCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 634 GKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 634 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
..+.. +.. +......+.+++.+||+.+|.+|||++|+++.|+.+++...
T Consensus 319 ~~~~~-----~~~----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 319 KEGHR-----MDK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HTTCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred hcCCC-----CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 11111 111 11223467899999999999999999999999999987654
No 26
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.8e-37 Score=346.74 Aligned_cols=235 Identities=21% Similarity=0.300 Sum_probs=174.1
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHH---HHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQ---AEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~---~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|+. +++.||||++.+... .....+. .++.+++.++|||||++++++.+.+..+||||
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence 457899999999999998 577999999964321 1122333 44666777799999999999999999999999
Q ss_pred eCCCCCHHHHhccCCC----CCCCHHH----HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 502 FMANGNLQALLLGEEA----DILSWEG----RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~----~~l~~~~----~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
||++|+|.+++..... .+..+.. .+..+|+...|||||||+||||+.++++||+|||+|+.+... ..
T Consensus 273 y~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-----~~ 347 (689)
T 3v5w_A 273 LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----KP 347 (689)
T ss_dssp CCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----CC
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC-----CC
Confidence 9999999999975421 1222333 344444444499999999999999999999999999876432 22
Q ss_pred ecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 574 TTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
...+||+.|||||.+.. ..|+.++|+||+||+||||++|+.||....... ..+..+..... . ..+.....
T Consensus 348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-~~~i~~~i~~~-~------~~~p~~~S- 418 (689)
T 3v5w_A 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTM-A------VELPDSFS- 418 (689)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-HHHHHHHHHHC-C------CCCCTTSC-
T ss_pred CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCC-C------CCCCccCC-
Confidence 34689999999999964 579999999999999999999999997644322 22222222111 1 11112222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPT-----MNQVVM 681 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPs-----m~evl~ 681 (723)
..+.+++.+||+.||.+|++ ++||++
T Consensus 419 ---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 419 ---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 35679999999999999998 455543
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.1e-36 Score=320.41 Aligned_cols=250 Identities=26% Similarity=0.342 Sum_probs=188.3
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCC----ceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT----NRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|...++.||||++..... ....+..|+.++++++||||+++++++.... ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 357899999999999999999999999975433 3345677999999999999999999997754 36999999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHH----------HHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCC
Q 004935 506 GNLQALLLGEEADILSWEGRLR----------IAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPV 565 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~----------i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 565 (723)
|+|.+++.... ++|...+. .+|+. ..+||||||+|||++.++.+||+|||+++....
T Consensus 107 g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~ 183 (322)
T 3soc_A 107 GSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183 (322)
T ss_dssp CBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECT
T ss_pred CCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccccc
Confidence 99999997642 45554443 44444 459999999999999999999999999987643
Q ss_pred CCCCceeeecccCCCcccccccccc-----CCCCChhhHHHHHHHHHHHHcCCCccccCcccc------------cHHHH
Q 004935 566 EGSGTHVTTTIAGTPGYLDPEYYIS-----NRLTEKSDVYNFGVVLLEIITSKSVIERTHERI------------HITQW 628 (723)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~------------~~~~~ 628 (723)
... ........||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+
T Consensus 184 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 3soc_A 184 GKS-AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262 (322)
T ss_dssp TSC-CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred ccC-ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence 322 122334578999999999876 356678999999999999999999997543211 11122
Q ss_pred HHHHhcCCCcccccCCcccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 629 VSFMLGKGDIESIVDPRLHED-FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 629 ~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
....... .. .+.+... ........+.+++.+||+.+|++|||++||++.|+++.+.
T Consensus 263 ~~~~~~~-~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 263 QEVVVHK-KK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHTTS-CC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhcc-cC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 2211111 11 1111111 1223556789999999999999999999999999988754
No 28
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.4e-36 Score=329.76 Aligned_cols=247 Identities=23% Similarity=0.384 Sum_probs=179.7
Q ss_pred hhhhccccCcEEEEEEEEC-----CceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|++. +..||||+++.. .....++|.+|++++++++||||++++++|...+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3578999999999999873 447999999765 3445678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... ..+++...+.++.+++ .+||||||+|||++.++.+||+|||+++............
T Consensus 129 ~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 207 (373)
T 2qol_A 129 ENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207 (373)
T ss_dssp TTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------
T ss_pred CCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceec
Confidence 9999999997643 2356665555544443 3999999999999999999999999998764332211222
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... +..... ..+. ......
T Consensus 208 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~----~~~~~i-~~~~---------~~~~~~ 273 (373)
T 2qol_A 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAV-DEGY---------RLPPPM 273 (373)
T ss_dssp ------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH----HHHHHH-HTTE---------ECCCCT
T ss_pred cCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH-HcCC---------CCCCCc
Confidence 23345778999999999999999999999999999998 99999755321 111111 1110 011111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.....+.+++.+||+.+|.+||+|++|++.|+.++....
T Consensus 274 ~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 233468899999999999999999999999999886543
No 29
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.5e-36 Score=316.71 Aligned_cols=250 Identities=25% Similarity=0.385 Sum_probs=184.9
Q ss_pred HhhhhccccCcEEEEEEEE------CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecC--CceEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL------DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG--TNRGLIY 500 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~lV~ 500 (723)
.+.+.||+|+||.||+|++ +++.||||++........+.|.+|++++++++||||++++++|... ...++||
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 92 (295)
T 3ugc_A 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92 (295)
T ss_dssp EEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEE
T ss_pred hhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEE
Confidence 3467899999999999985 4668999999887777778899999999999999999999998553 5589999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc
Q 004935 501 EFMANGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 570 (723)
||+++|+|.+++..... .+++...+.++.+ ...+||||||+|||++.++.+||+|||+++.........
T Consensus 93 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (295)
T 3ugc_A 93 EYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF 171 (295)
T ss_dssp ECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---------
T ss_pred EeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCccee
Confidence 99999999999976532 2454444444333 334999999999999999999999999998765433222
Q ss_pred eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc-----------ccHHHHHHHHhcCCCcc
Q 004935 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER-----------IHITQWVSFMLGKGDIE 639 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~ 639 (723)
.......++..|+|||.+.+..++.++||||||++++||+||..|+...... ......+......+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (295)
T 3ugc_A 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-- 249 (295)
T ss_dssp ----CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC--
T ss_pred eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccC--
Confidence 2334455777899999999999999999999999999999999887543210 000111111111111
Q ss_pred cccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 640 SIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 640 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
...........+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 250 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 250 -------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 011112233468899999999999999999999999998864
No 30
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.9e-36 Score=333.03 Aligned_cols=237 Identities=27% Similarity=0.408 Sum_probs=188.2
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCC-ceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT-NRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~-~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|...++.||||+++... ..+.|.+|+++|++++||||++++++|.... ..++|||||++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 35789999999999999999999999998654 3468999999999999999999999987665 78999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.......+++...+.++.+++. +||||||+|||++.++.+||+|||+++..... .....+
T Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------QDTGKL 348 (450)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------------CC
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc------ccCCCC
Confidence 99998765444566555555544443 99999999999999999999999999864221 122357
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+..|+|||.+.+..++.++|||||||+||||+| |+.||....... ....+ ..+.. . ..+......
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i----~~~~~-----~----~~p~~~~~~ 414 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPRV----EKGYK-----M----DAPDGCPPA 414 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-HHHHH----HTTCC-----C----CCCTTCCHH
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH----HcCCC-----C----CCCCcCCHH
Confidence 889999999999999999999999999999998 999997654322 22211 11110 0 111123346
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 415 l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 415 VYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 7899999999999999999999999998764
No 31
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9.1e-36 Score=316.66 Aligned_cols=249 Identities=19% Similarity=0.262 Sum_probs=194.6
Q ss_pred ccccCHHHHHHHHHHh------------hhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccC
Q 004935 415 NQRFSYSNVLRITNNF------------ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH 480 (723)
Q Consensus 415 ~~~~~~~~l~~~t~~f------------~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H 480 (723)
...++++++..++... .+.||+|+||.||+|.. +++.||||++........+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 3568888888887642 35799999999999998 477999999987666667789999999999999
Q ss_pred CceeeEEEEEecCCceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCC
Q 004935 481 KNLTTLVGYCDEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKF 550 (723)
Q Consensus 481 ~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~ 550 (723)
|||+++++++...+..++||||+++|+|.+++... .+++.....++.+++ .+||||||+|||++.++
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999998753 356665555554443 39999999999999999
Q ss_pred cEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHH
Q 004935 551 QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVS 630 (723)
Q Consensus 551 ~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~ 630 (723)
.+||+|||+++...... .......||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +...
T Consensus 179 ~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----~~~~ 251 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDV---PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAMK 251 (321)
T ss_dssp CEEECCCTTCEECCSSS---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH
T ss_pred cEEEeeeeeeeecccCc---cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH
Confidence 99999999998764322 1234467999999999999999999999999999999999999999754322 1122
Q ss_pred HHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 631 FMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 631 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..... . .+.+.. .......+.+++.+|++.+|++|||++|+++
T Consensus 252 ~~~~~-~-----~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 252 RLRDS-P-----PPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHS-S-----CCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhcC-C-----CCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111 1 111111 0112235779999999999999999999986
No 32
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.7e-36 Score=314.05 Aligned_cols=233 Identities=21% Similarity=0.323 Sum_probs=182.8
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.+.||+|+||.||+|.. +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 56899999999999987 5679999999765555567899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.... ++.... +..+|+...+||||||+|||++.++.+||+|||+++...... .......|
T Consensus 105 ~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~g 178 (297)
T 3fxz_A 105 TDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---SKRSTMVG 178 (297)
T ss_dssp HHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---CCBCCCCS
T ss_pred HHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc---cccCCccC
Confidence 99987642 333333 333444444999999999999999999999999998764332 22345679
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKT 658 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l 658 (723)
|+.|+|||.+.+..++.++|||||||+++||++|+.||........... ....+. +.+. ........+
T Consensus 179 t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----~~~~~~------~~~~--~~~~~~~~~ 246 (297)
T 3fxz_A 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL----IATNGT------PELQ--NPEKLSAIF 246 (297)
T ss_dssp CGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHHCS------CCCS--CGGGSCHHH
T ss_pred CcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhCCC------CCCC--CccccCHHH
Confidence 9999999999999999999999999999999999999976543221111 111111 0000 011122357
Q ss_pred HHHHHhccCCCCCCCCCHHHHHH
Q 004935 659 VEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 659 ~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+++.+||+.+|++|||++|+++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhh
Confidence 79999999999999999999987
No 33
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.4e-36 Score=321.32 Aligned_cols=247 Identities=28% Similarity=0.413 Sum_probs=189.6
Q ss_pred hhhhccccCcEEEEEEEE-------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCc-eEEE
Q 004935 430 FERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTN-RGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~-~~lV 499 (723)
+.+.||+|+||.||+|.+ +++.||||+++... ....+.+.+|+++++++ +||||++++++|...+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 357899999999999984 23589999998654 34457799999999999 89999999999987554 8999
Q ss_pred EEeCCCCCHHHHhccCCCC-------------------------------------------------------------
Q 004935 500 YEFMANGNLQALLLGEEAD------------------------------------------------------------- 518 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~------------------------------------------------------------- 518 (723)
|||+++|+|.+++......
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 9999999999999764321
Q ss_pred ---CCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccCCCccccc
Q 004935 519 ---ILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDP 585 (723)
Q Consensus 519 ---~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aP 585 (723)
.+++...+.++.+++ .+||||||+|||++.++.+||+|||+++....... ........+|+.|+||
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAP 264 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT-CEEC--CEECGGGCCH
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc-chhccccCCCceeECh
Confidence 155555444444433 39999999999999999999999999987643322 2334456688999999
Q ss_pred cccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHh
Q 004935 586 EYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMA 664 (723)
Q Consensus 586 E~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~ 664 (723)
|.+.+..++.++|||||||+++||+| |+.||............+. .+.. ...... ....+.+++.+
T Consensus 265 E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~~~-----~~~~~~----~~~~l~~li~~ 331 (359)
T 3vhe_A 265 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTR-----MRAPDY----TTPEMYQTMLD 331 (359)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----HTCC-----CCCCTT----CCHHHHHHHHH
T ss_pred hhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----cCCC-----CCCCCC----CCHHHHHHHHH
Confidence 99999999999999999999999998 9999976543332222222 1111 111111 22357899999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 665 CVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 665 Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
|++.+|.+|||++|+++.|+++++..
T Consensus 332 ~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 332 CWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HccCChhhCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999988643
No 34
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.2e-35 Score=308.22 Aligned_cols=247 Identities=27% Similarity=0.430 Sum_probs=182.5
Q ss_pred HhhhhccccCcEEEEEEEECCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.+.||+|+||.||+|...+ .+|+|+++.. .....+.|.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 39 ~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 39 MLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp CEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 345789999999999998755 5899988753 3445678999999999999999999999875 45689999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... ..+++...+.++.++ ..+||||||+|||+++++.+||+|||+++....... .......
T Consensus 117 ~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~-~~~~~~~ 194 (307)
T 3lb7_A 117 SLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-SQQVEQP 194 (307)
T ss_dssp BHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------------C
T ss_pred cHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc-cccccCC
Confidence 9999997543 235555544444433 339999999999999999999999999986532211 2233445
Q ss_pred cCCCccccccccc---cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 577 AGTPGYLDPEYYI---SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 577 ~gt~~y~aPE~~~---~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
.||+.|+|||.+. +..++.++|||||||+++||++|+.||........+...+.......... .+.. .
T Consensus 195 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~ 265 (307)
T 3lb7_A 195 TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS-----KLYK----N 265 (307)
T ss_dssp CCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCST-----TSCS----S
T ss_pred CCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchh-----hhhc----C
Confidence 7999999999986 56789999999999999999999999976544333322222111111111 1111 2
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
....+.+++.+|++.+|++||++.|+++.|+.+..
T Consensus 266 ~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 266 CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 23467899999999999999999999999987653
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=320.80 Aligned_cols=249 Identities=29% Similarity=0.421 Sum_probs=195.4
Q ss_pred hhhhccccCcEEEEEEEEC---------CceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEE
Q 004935 430 FERVLGNGGFGTVYHGYLD---------GTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~---------~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 498 (723)
+.+.||+|+||.||+|... +..||||++.... ....+++.+|+++++++ +||||++++++|...+..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 4578999999999999862 2479999997653 44557899999999999 99999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCC--------------CCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEE
Q 004935 499 IYEFMANGNLQALLLGEE--------------ADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKI 554 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl 554 (723)
||||+++|+|.+++.... ...+++...+.++.+++. +||||||+|||++.++.+||
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL 232 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKI 232 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEE
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEE
Confidence 999999999999997643 134666666665555443 99999999999999999999
Q ss_pred EeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHh
Q 004935 555 ADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFML 633 (723)
Q Consensus 555 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~ 633 (723)
+|||+++....... ........+|+.|+|||.+.+..++.++|||||||+++||++ |+.||..... .+......
T Consensus 233 ~DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----~~~~~~~~ 307 (382)
T 3tt0_A 233 ADFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----EELFKLLK 307 (382)
T ss_dssp CSCSCCCCSSCCCT-TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHHHH
T ss_pred cccCcccccccccc-cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHH
Confidence 99999987643221 122334567889999999999999999999999999999999 9999875432 22222221
Q ss_pred cCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhh
Q 004935 634 GKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETAR 693 (723)
Q Consensus 634 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~ 693 (723)
.+.. +.... .....+.+++.+||+.+|++|||++||++.|+++++.....
T Consensus 308 -~~~~-----~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 308 -EGHR-----MDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp -TTCC-----CCCCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred -cCCC-----CCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 2111 11111 12336789999999999999999999999999999776553
No 36
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.9e-35 Score=304.00 Aligned_cols=237 Identities=18% Similarity=0.310 Sum_probs=187.7
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecC--CceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG--TNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|..+++.||||++.... ....+.|.+|++++++++||||+++++++... ...++||||+++
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 45789999999999999999999999997653 44557899999999999999999999999877 778999999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHHHhc----------c--ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 506 GNLQALLLGEEADILSWEGRLRIAIEA----------A--KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a--~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
|+|.+++.......+++...+.++.++ . .+||||||+||+++.++.++|+|||++.....
T Consensus 94 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-------- 165 (271)
T 3kmu_A 94 GSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-------- 165 (271)
T ss_dssp CBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--------
T ss_pred CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc--------
Confidence 999999987655556666655554443 3 48999999999999999999999998765321
Q ss_pred ecccCCCccccccccccCCCCC---hhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 574 TTIAGTPGYLDPEYYISNRLTE---KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~---~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
....+|+.|+|||.+.+..++. ++|||||||+++||++|+.||....... ........+. .+.+...
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~-----~~~~~~~- 235 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----IGMKVALEGL-----RPTIPPG- 235 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----HHHHHHHSCC-----CCCCCTT-
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----HHHHHHhcCC-----CCCCCCC-
Confidence 2346789999999998765544 8999999999999999999997654321 1122221111 1112122
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~ 687 (723)
....+.+++.+|++.+|++|||++|+++.|+++.
T Consensus 236 ---~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 236 ---ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 2236789999999999999999999999999875
No 37
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.2e-36 Score=336.71 Aligned_cols=244 Identities=27% Similarity=0.379 Sum_probs=193.4
Q ss_pred HhhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.+.||+|+||.||+|.+. +..||||+++.... ..++|.+|+++|++++||||++++++|......++|||||++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g 301 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 301 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence 34678999999999999995 66999999976543 3578999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.......+++...+.++.+++. +||||||+|||++.++.+||+|||+++...... .......
T Consensus 302 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~~ 379 (495)
T 1opk_A 302 NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGA 379 (495)
T ss_dssp BHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC--EECCTTC
T ss_pred CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc--eeecCCC
Confidence 9999998765555666666555544443 999999999999999999999999998764221 1222334
Q ss_pred cCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
.++..|+|||.+.+..++.++|||||||+||||+| |+.||...... .+.+.+. .+. ....+....
T Consensus 380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~~~~~----~~~---------~~~~~~~~~ 445 (495)
T 1opk_A 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLE----KDY---------RMERPEGCP 445 (495)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHH----TTC---------CCCCCTTCC
T ss_pred cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHH----cCC---------CCCCCCCCC
Confidence 56778999999999999999999999999999999 99998765432 2222221 110 111111223
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
..+.+++.+||+.+|++||||+++++.|+++++.
T Consensus 446 ~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999988643
No 38
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3e-35 Score=309.12 Aligned_cols=247 Identities=24% Similarity=0.291 Sum_probs=183.3
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHh--ccCCceeeEEEEEec----CCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR--IHHKNLTTLVGYCDE----GTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~----~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|..+++.||||++... ..+.+..|.+++.. ++||||+++++++.. ....++||||+
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 4578999999999999999999999998643 34566777777777 799999999999754 34578999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHH----------HHHHH--------hccccccCCCCCCEEEcCCCcEEEEeccCccccCC
Q 004935 504 ANGNLQALLLGEEADILSWEGR----------LRIAI--------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPV 565 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~----------l~i~~--------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 565 (723)
++|+|.+++... .+++... +..+| +...+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 165 (301)
T 3q4u_A 89 EMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165 (301)
T ss_dssp TTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccc
Confidence 999999999653 2444433 44444 34449999999999999999999999999987543
Q ss_pred CCCCce-eeecccCCCccccccccccC------CCCChhhHHHHHHHHHHHHcC----------CCccccCcccccHHHH
Q 004935 566 EGSGTH-VTTTIAGTPGYLDPEYYISN------RLTEKSDVYNFGVVLLEIITS----------KSVIERTHERIHITQW 628 (723)
Q Consensus 566 ~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~SfGvvL~elltg----------~~p~~~~~~~~~~~~~ 628 (723)
...... ......||+.|+|||.+.+. .++.++|||||||++|||+|| +.||............
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~ 245 (301)
T 3q4u_A 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245 (301)
T ss_dssp TTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred ccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhh
Confidence 322111 12334799999999999876 456799999999999999999 7887654333222222
Q ss_pred HHHHhcCCCcccccCCcccC-CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 004935 629 VSFMLGKGDIESIVDPRLHE-DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNES 686 (723)
Q Consensus 629 ~~~~~~~~~~~~i~d~~l~~-~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~ 686 (723)
.......... .+.+.. .........+.+++.+||+.+|++|||++||++.|+++
T Consensus 246 ~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 246 MRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2222221111 111111 12234567889999999999999999999999999875
No 39
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.3e-35 Score=310.58 Aligned_cols=248 Identities=27% Similarity=0.393 Sum_probs=193.9
Q ss_pred HhhhhccccCcEEEEEEEE-------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV 499 (723)
.+.+.||+|+||.||+|.. .+..||||++.... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 105 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 105 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEE
Confidence 3467899999999999985 24589999998654 34457899999999999 999999999999999999999
Q ss_pred EEeCCCCCHHHHhccCCC----------------CCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEE
Q 004935 500 YEFMANGNLQALLLGEEA----------------DILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAK 553 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~----------------~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~k 553 (723)
|||+++|+|.+++..... ..+++...+.++.+++ .+||||||+||+++.++.+|
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 185 (313)
T 1t46_A 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 185 (313)
T ss_dssp EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEE
Confidence 999999999999976432 1356665555544443 39999999999999999999
Q ss_pred EEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHH
Q 004935 554 IADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFM 632 (723)
Q Consensus 554 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~ 632 (723)
|+|||+++....... ........+++.|+|||.+.+..++.++||||||++++||+| |+.||............+...
T Consensus 186 l~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 264 (313)
T 1t46_A 186 ICDFGLARDIKNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264 (313)
T ss_dssp ECCCGGGSCTTSCTT-SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHT
T ss_pred Ecccccccccccccc-ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccC
Confidence 999999987654322 223334557789999999999999999999999999999999 999997654433322222211
Q ss_pred hcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 633 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
.. +.... .....+.+++.+|++.+|.+|||++|+++.|+++++..
T Consensus 265 ~~---------~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 265 FR---------MLSPE----HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp CC---------CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CC---------CCCcc----cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 10 01111 12246789999999999999999999999999988643
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.8e-36 Score=327.92 Aligned_cols=244 Identities=24% Similarity=0.330 Sum_probs=186.2
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.+. ++.||||+++... ....++|.+|+++|++++||||++++++|...+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 3578999999999999994 6799999987653 334457899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... ..+++...+.++.++ ..+||||||+|||++.++.+||+|||+++....... .......
T Consensus 198 ~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~-~~~~~~~ 275 (377)
T 3cbl_A 198 DFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY-AASGGLR 275 (377)
T ss_dssp BHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE-ECCSSCC
T ss_pred CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce-eecCCCC
Confidence 9999987532 234555544444433 339999999999999999999999999986432100 0011122
Q ss_pred cCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
.++..|+|||.+.+..++.++|||||||++|||+| |+.||...... + +......+... .. +....
T Consensus 276 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~-~~~~~~~~~~~-----~~----~~~~~ 341 (377)
T 3cbl_A 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----Q-TREFVEKGGRL-----PC----PELCP 341 (377)
T ss_dssp EEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----H-HHHHHHTTCCC-----CC----CTTCC
T ss_pred CCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----H-HHHHHHcCCCC-----CC----CCCCC
Confidence 35678999999998999999999999999999998 99998765321 1 11122221110 11 11123
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
..+.+++.+||+.+|++|||++++++.|+++...
T Consensus 342 ~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 342 DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999987653
No 41
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-35 Score=316.25 Aligned_cols=249 Identities=27% Similarity=0.405 Sum_probs=189.4
Q ss_pred HhhhhccccCcEEEEEEEE-------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV 499 (723)
.+.+.||+|+||.||+|.. .+..||||++.... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 127 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEE
Confidence 3467899999999999997 23479999997543 33446799999999999 999999999999999999999
Q ss_pred EEeCCCCCHHHHhccCCC---------------------CCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcC
Q 004935 500 YEFMANGNLQALLLGEEA---------------------DILSWEGRLRIAIEAA----------KVHRDVKSTNILLSG 548 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~---------------------~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~ 548 (723)
|||+++|+|.+++..... ..+++...+.++.+++ .+||||||+|||++.
T Consensus 128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~ 207 (344)
T 1rjb_A 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH 207 (344)
T ss_dssp EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcC
Confidence 999999999999976432 2356655555544443 399999999999999
Q ss_pred CCcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHH
Q 004935 549 KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQ 627 (723)
Q Consensus 549 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~ 627 (723)
++.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||||+++||+| |+.||...........
T Consensus 208 ~~~~kL~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 286 (344)
T 1rjb_A 208 GKVVKICDFGLARDIMSDSN-YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK 286 (344)
T ss_dssp TTEEEECCCGGGSCGGGCTT-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred CCcEEeCCCccCcccccCcc-ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHH
Confidence 99999999999987644322 233344567889999999999999999999999999999998 9999976544333322
Q ss_pred HHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 628 WVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 628 ~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.+. .+.. +.. +......+.+++.+||+.+|.+|||+.++++.|+.+++...
T Consensus 287 ~~~----~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 287 LIQ----NGFK-----MDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp HHH----TTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred HHh----cCCC-----CCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 222 1110 111 11123467899999999999999999999999998876543
No 42
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=307.19 Aligned_cols=255 Identities=21% Similarity=0.289 Sum_probs=193.0
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCC--ceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT--NRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 3578999999999999985 6799999997543 234567889999999999999999999987765 6799999999
Q ss_pred CCCHHHHhccCCC-CCCCHHHHHHHHHhcc----------ccccCCCCCCEEE----cCCCcEEEEeccCccccCCCCCC
Q 004935 505 NGNLQALLLGEEA-DILSWEGRLRIAIEAA----------KVHRDVKSTNILL----SGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 505 ~gsL~~~l~~~~~-~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl----~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
+|+|.+++..... ..+++...+.++.+++ .+||||||+|||+ +.++.+||+|||+++......
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~-- 170 (319)
T 4euu_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-- 170 (319)
T ss_dssp TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC--
T ss_pred CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC--
Confidence 9999999976432 2356655555544443 3999999999999 788889999999998764332
Q ss_pred ceeeecccCCCccccccccc--------cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC---Cc
Q 004935 570 THVTTTIAGTPGYLDPEYYI--------SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG---DI 638 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~ 638 (723)
......||+.|+|||.+. +..++.++|||||||++|||+||+.||..........+.+....... ..
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (319)
T 4euu_A 171 --QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (319)
T ss_dssp --CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCC
T ss_pred --ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccc
Confidence 223456899999999986 56789999999999999999999999975543333333333332211 11
Q ss_pred cccc---------CCc--ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 639 ESIV---------DPR--LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 639 ~~i~---------d~~--l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
..+. .+. ............+.+++.+|++.||++|||++|+++...+..-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred hhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 1100 001 1123345667778899999999999999999999999886653
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-35 Score=310.45 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=185.7
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC---ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. .+..||+|++... .....+.|.+|+.++++++||||+++++++...+..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 457899999999999997 4669999998543 33445789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++...+ ..+|+...+||||||+|||++.++.+||+|||+++...... .....
T Consensus 95 g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 170 (294)
T 4eqm_A 95 GPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--LTQTN 170 (294)
T ss_dssp SCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----------
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc--ccccC
Confidence 999999987542 24444333 33344444999999999999999999999999998764221 12233
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .......... . +..........
T Consensus 171 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----~~~~~~~~~~-~-----~~~~~~~~~~~ 240 (294)
T 4eqm_A 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV----SIAIKHIQDS-V-----PNVTTDVRKDI 240 (294)
T ss_dssp ----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH----HHHHHHHSSC-C-----CCHHHHSCTTS
T ss_pred ccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhhcc-C-----CCcchhcccCC
Confidence 456899999999999999999999999999999999999999765432 1111111111 1 11101111122
Q ss_pred HHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHhhhhHhh
Q 004935 655 VWKTVEIAMACVSQTSTKRP-TMNQVVMELNESLAIETA 692 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RP-sm~evl~~L~~~~~~~~~ 692 (723)
...+.+++.+|++.+|.+|| +++++.+.|+.++.....
T Consensus 241 ~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 241 PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 34678999999999999998 999999999988754443
No 44
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-35 Score=331.17 Aligned_cols=241 Identities=27% Similarity=0.390 Sum_probs=186.1
Q ss_pred hhhhccccCcEEEEEEEEC-CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|.+. +..||||+++... ...+.|.+|+++|++++||||+++++++. .+..++|||||++|+|
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L 269 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcH
Confidence 4578999999999999995 5689999998654 34678999999999999999999999986 6678999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.......+++...+.++.+ ...+||||||+|||++.++.+||+|||+++...... ........+
T Consensus 270 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~~ 347 (454)
T 1qcf_A 270 LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE--YTAREGAKF 347 (454)
T ss_dssp HHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH--HHTTCSSSS
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc--eeccCCCcc
Confidence 99997543223444444444333 333999999999999999999999999998753211 111223446
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+..|+|||.+....++.++|||||||+||||+| |+.||...... +........... ..+......
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i~~~~~~----------~~~~~~~~~ 413 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALERGYRM----------PRPENCPEE 413 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHHTCCC----------CCCTTSCHH
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCCCC----------CCCCCCCHH
Confidence 778999999999999999999999999999999 99999765332 222222111111 011122346
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
+.+++.+||+.+|++||||++|++.|+++..
T Consensus 414 l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 414 LYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 7899999999999999999999999998763
No 45
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.1e-35 Score=304.18 Aligned_cols=236 Identities=26% Similarity=0.426 Sum_probs=173.7
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCCh----hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSA----QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~----~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|...++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 457899999999999999999999999875432 2346789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHH----------HHHHHhcc---ccccCCCCCCEEEcC--------CCcEEEEeccCccccC
Q 004935 506 GNLQALLLGEEADILSWEGR----------LRIAIEAA---KVHRDVKSTNILLSG--------KFQAKIADFGLSRTFP 564 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a---~vH~Dlk~~NILl~~--------~~~~kl~DfGla~~~~ 564 (723)
++|.+++... .+++... +..+|+.. .+||||||+|||++. ++.+||+|||+++...
T Consensus 91 ~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 167 (271)
T 3dtc_A 91 GPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167 (271)
T ss_dssp EEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----
T ss_pred CCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccc
Confidence 9999998643 2344333 33444444 479999999999986 6789999999998653
Q ss_pred CCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCC
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 644 (723)
.. ......|++.|+|||.+.+..++.++||||||++++||++|+.||....... ........ ... .
T Consensus 168 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~-~~~----~ 233 (271)
T 3dtc_A 168 RT-----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA----VAYGVAMN-KLA----L 233 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH----HHHHHHTS-CCC----C
T ss_pred cc-----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHhhhcC-CCC----C
Confidence 22 1224568999999999999999999999999999999999999997654321 11111111 110 1
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 004935 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNES 686 (723)
Q Consensus 645 ~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~ 686 (723)
.. .......+.+++.+|++.+|.+|||++|+++.|+++
T Consensus 234 ~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 PI----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CC----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11 112234678999999999999999999999999853
No 46
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.8e-35 Score=313.74 Aligned_cols=245 Identities=23% Similarity=0.353 Sum_probs=181.4
Q ss_pred hhhhccccCcEEEEEEEEC--Cc----eEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLD--GT----EVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~----~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|.+. ++ .||+|.+.... ....++|.+|++++++++||||++++++|.... .++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 3578999999999999973 33 46888886543 345678999999999999999999999998754 7899999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 503 MANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
+++|+|.+++..... .+++...+.++. +...+||||||+|||++.++.+||+|||+++....... ...
T Consensus 98 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~ 175 (327)
T 3poz_A 98 MPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYH 175 (327)
T ss_dssp CTTCBHHHHHHHSTT-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC----
T ss_pred cCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc-ccc
Confidence 999999999976432 344444444333 33339999999999999999999999999987643322 222
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
.....+|..|+|||.+.+..++.++|||||||++|||+| |+.||...... .+...+. .+.. ....
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~----~~~~---------~~~~ 241 (327)
T 3poz_A 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILE----KGER---------LPQP 241 (327)
T ss_dssp ----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH----TTCC---------CCCC
T ss_pred ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-HHHHHHH----cCCC---------CCCC
Confidence 334557889999999999999999999999999999999 99999765432 2222221 1110 0011
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
......+.+++.+||+.+|.+||+|+++++.|+.+.....
T Consensus 242 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~ 281 (327)
T 3poz_A 242 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 281 (327)
T ss_dssp TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhh
Confidence 1223467899999999999999999999999998876443
No 47
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=320.57 Aligned_cols=248 Identities=26% Similarity=0.392 Sum_probs=190.3
Q ss_pred hhhhccccCcEEEEEEEEC-------CceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLD-------GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-------~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|... +..||||++... ......++.+|+.++++++||||+++++++......++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 4678999999999999953 447999999754 34556689999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCC-----CCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCC---cEEEEeccCcccc
Q 004935 502 FMANGNLQALLLGEE-----ADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKF---QAKIADFGLSRTF 563 (723)
Q Consensus 502 y~~~gsL~~~l~~~~-----~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~---~~kl~DfGla~~~ 563 (723)
|+++|+|.+++.... ...+.+...+.++.+++ .+||||||+|||++.++ .+||+|||+++..
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 999999999997532 23466655555544443 39999999999999554 5999999999854
Q ss_pred CCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCccccc
Q 004935 564 PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIV 642 (723)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 642 (723)
..... ........+|+.|+|||.+.+..++.++|||||||+++||+| |+.||...... +...........
T Consensus 235 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~----~~~~~i~~~~~~---- 305 (367)
T 3l9p_A 235 YRAGY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVTSGGRM---- 305 (367)
T ss_dssp HHHSS-CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHTTCCC----
T ss_pred ccccc-cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCCCC----
Confidence 32111 112234567889999999999999999999999999999998 99999765322 222222211110
Q ss_pred CCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 643 DPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 643 d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
.. .......+.+++.+||+.+|.+|||+.+|++.|+.+.+....
T Consensus 306 --~~----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 306 --DP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp --CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred --CC----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 11 111233578999999999999999999999999998866544
No 48
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-35 Score=304.21 Aligned_cols=241 Identities=27% Similarity=0.434 Sum_probs=187.0
Q ss_pred hhhhccccCcEEEEEEEE-CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|.. +++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 92 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcH
Confidence 457899999999999998 566899999986543 346799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++..... .+++...+.++ |+...+||||||+||+++.++.+||+|||+++...... ........+
T Consensus 93 ~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~ 169 (269)
T 4hcu_A 93 SDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKF 169 (269)
T ss_dssp HHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH--HHSTTSTTC
T ss_pred HHHHHhcCc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc--cccccCccc
Confidence 999975432 34444444433 33334999999999999999999999999998653211 112233456
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
++.|+|||.+.+..++.++||||||++++||++ |+.||...... +......... ....+ .. ....
T Consensus 170 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~----~~~~~~~~~~---~~~~~---~~----~~~~ 235 (269)
T 4hcu_A 170 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGF---RLYKP---RL----ASTH 235 (269)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHHTTC---CCCCC---TT----SCHH
T ss_pred ccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH----HHHHHHhcCc---cCCCC---Cc----CCHH
Confidence 778999999999999999999999999999999 99998764332 2222221110 00111 11 1235
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
+.+++.+|++.+|++|||++++++.|+++.+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 236 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 7899999999999999999999999998875
No 49
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-35 Score=315.77 Aligned_cols=245 Identities=31% Similarity=0.445 Sum_probs=190.4
Q ss_pred hhhhccccCcEEEEEEEECC-------ceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~-------~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|...+ +.||||+++... ....+.|.+|++++++++||||++++++|...+..++|||
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 35789999999999999853 689999998654 3445789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCCC----------------------CCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCC
Q 004935 502 FMANGNLQALLLGEEA----------------------DILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGK 549 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~----------------------~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~ 549 (723)
|+++|+|.+++..... ..+++...+.++.+++ .+||||||+|||++.+
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 210 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC
Confidence 9999999999976421 3466666655554444 3999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHH
Q 004935 550 FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQW 628 (723)
Q Consensus 550 ~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~ 628 (723)
+.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...... +.
T Consensus 211 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~ 285 (343)
T 1luf_A 211 MVVKIADFGLSRNIYSADY-YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE----EV 285 (343)
T ss_dssp GCEEECCCSCHHHHTGGGC-BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HH
T ss_pred CeEEEeecCCCcccccCcc-ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH----HH
Confidence 9999999999986532211 122234567889999999999999999999999999999999 99999754321 22
Q ss_pred HHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 629 VSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 629 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
.. ....+.... ... .....+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus 286 ~~-~~~~~~~~~-----~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 286 IY-YVRDGNILA-----CPE----NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HH-HHHTTCCCC-----CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred HH-HHhCCCcCC-----CCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 22 222222111 111 1223678999999999999999999999999988754
No 50
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=308.02 Aligned_cols=239 Identities=26% Similarity=0.442 Sum_probs=179.5
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCHH
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 509 (723)
+.+.||+|+||.||+|...++.||||++.... ..+.|.+|++++++++||||+++++++. +..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKWRAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEETTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEECCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 35789999999999999999999999997543 3578999999999999999999999887 4579999999999999
Q ss_pred HHhccCCC-CCCCHH----------HHHHHHHh---ccccccCCCCCCEEEcCCCc-EEEEeccCccccCCCCCCceeee
Q 004935 510 ALLLGEEA-DILSWE----------GRLRIAIE---AAKVHRDVKSTNILLSGKFQ-AKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 510 ~~l~~~~~-~~l~~~----------~~l~i~~~---~a~vH~Dlk~~NILl~~~~~-~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++..... ..+.+. ..+..+|+ ...+||||||+|||++.++. +||+|||+++..... ..
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------~~ 161 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------MT 161 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------------
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------cc
Confidence 99986532 123333 33444555 34599999999999998886 799999999765321 22
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||+++||++|+.||....... ........ .+.. +.+....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~-~~~~-----~~~~~~~---- 229 (307)
T 2eva_A 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMWAVH-NGTR-----PPLIKNL---- 229 (307)
T ss_dssp ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH--HHHHHHHH-TTCC-----CCCBTTC----
T ss_pred cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH--HHHHHHHh-cCCC-----CCccccc----
Confidence 3468999999999999999999999999999999999999997543321 11111111 1111 1111122
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
...+.+++.+|++.+|++|||++++++.|+.+.+.-
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 235779999999999999999999999999887544
No 51
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.1e-35 Score=313.44 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=189.1
Q ss_pred hhhhccccCcEEEEEEEE------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecC--CceEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG--TNRGLIY 500 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~lV~ 500 (723)
+.+.||+|+||.||++.+ +++.||||++.... ....+.+.+|++++++++||||+++++++... ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 357899999999999875 46689999998654 34567799999999999999999999999874 5678999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc
Q 004935 501 EFMANGNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 570 (723)
||+++|+|.+++.... +++...+.++.++ ..+||||||+|||++.++.+||+|||+++.........
T Consensus 115 e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp CCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred ecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 9999999999997653 4555544444433 33999999999999999999999999998875433222
Q ss_pred eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccc----------cHHHHHHHHhcCCCccc
Q 004935 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERI----------HITQWVSFMLGKGDIES 640 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~ 640 (723)
.......++..|+|||.+.+..++.++||||||++++||+||+.||....... .....+......+
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 267 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG---- 267 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT----
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc----
Confidence 33345568888999999999899999999999999999999999986432110 0000111111111
Q ss_pred ccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 641 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
............+.+++.+||+.+|.+|||++|+++.|+++.+.-.
T Consensus 268 -----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 268 -----ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 1111122233468899999999999999999999999998875543
No 52
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.4e-35 Score=310.67 Aligned_cols=245 Identities=26% Similarity=0.388 Sum_probs=190.4
Q ss_pred hhhhccccCcEEEEEEEE-------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|.. ++..||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 357899999999999986 23589999997653 4456789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCCC----------------------CCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCC
Q 004935 502 FMANGNLQALLLGEEA----------------------DILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGK 549 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~----------------------~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~ 549 (723)
|+++|+|.+++..... ..+++...+.++.++ ..+||||||+|||++.+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~ 186 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC
Confidence 9999999999976422 235555444444433 33999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHH
Q 004935 550 FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQW 628 (723)
Q Consensus 550 ~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~ 628 (723)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||+++||+| |+.||...... .+...
T Consensus 187 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~ 264 (314)
T 2ivs_A 187 RKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNL 264 (314)
T ss_dssp TEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHH
T ss_pred CCEEEcccccccccccccc-ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH
Confidence 9999999999987643322 122234457788999999999899999999999999999999 99999765432 22222
Q ss_pred HHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 629 VSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 629 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
+. .+.. +.... .....+.+++.+|++.+|++|||++|+++.|+++++.
T Consensus 265 ~~----~~~~-----~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 265 LK----TGHR-----MERPD----NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HH----TTCC-----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hh----cCCc-----CCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 1111 11111 1234678999999999999999999999999998754
No 53
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.3e-35 Score=310.41 Aligned_cols=233 Identities=23% Similarity=0.387 Sum_probs=181.5
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|.. +++.||||++... .....+.+.+|+++|++++||||+++++++...+..++||||+++
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 357899999999999998 5779999998654 344567789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCC----C----CCHHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 506 GNLQALLLGEEAD----I----LSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 506 gsL~~~l~~~~~~----~----l~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|+|.+++.....- . .+....+..+|+...+||||||+|||++.++.+||+|||+++..... .......
T Consensus 99 ~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----~~~~~~~ 174 (328)
T 3fe3_A 99 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG----GKLDAFC 174 (328)
T ss_dssp CBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS----CGGGTTS
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC----Ccccccc
Confidence 9999998654221 1 12223344445555599999999999999999999999999875432 1234567
Q ss_pred CCCccccccccccCCCC-ChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHH
Q 004935 578 GTPGYLDPEYYISNRLT-EKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVW 656 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~-~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~ 656 (723)
||+.|+|||.+.+..+. .++|||||||+++||++|+.||..... .+....... +.. .+... ...
T Consensus 175 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~-~~~------~~p~~----~s~ 239 (328)
T 3fe3_A 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL----KELRERVLR-GKY------RIPFY----MST 239 (328)
T ss_dssp SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHH-CCC------CCCTT----SCH
T ss_pred CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHh-CCC------CCCCC----CCH
Confidence 99999999999888775 799999999999999999999976532 222222211 111 11111 123
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 657 KTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 657 ~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+.+++.+|++.+|.+|||++|+++
T Consensus 240 ~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 240 DCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 5679999999999999999999886
No 54
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.9e-35 Score=312.38 Aligned_cols=249 Identities=27% Similarity=0.377 Sum_probs=192.2
Q ss_pred hhhhccccCcEEEEEEEECC-------ceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLDG-------TEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~-------~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
+.+.||+|+||.||+|...+ ..||+|++.... ....+.+.+|+++++++ +||||++++++|...+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 45789999999999999732 379999997654 34557799999999999 8999999999999999999999
Q ss_pred EeCCCCCHHHHhccCC------------CCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEecc
Q 004935 501 EFMANGNLQALLLGEE------------ADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFG 558 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~------------~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfG 558 (723)
||+++|+|.+++.... ...+++...+.++.+ ...+||||||+|||++.++.+||+|||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 209 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCG
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccc
Confidence 9999999999986531 223455544444433 333999999999999999999999999
Q ss_pred CccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCC
Q 004935 559 LSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGD 637 (723)
Q Consensus 559 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 637 (723)
+++....... ........+++.|+|||.+.+..++.++|||||||+++||+| |+.||............+.....
T Consensus 210 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--- 285 (333)
T 2i1m_A 210 LARDIMNDSN-YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ--- 285 (333)
T ss_dssp GGCCGGGCTT-SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCC---
T ss_pred cccccccccc-eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCC---
Confidence 9987643322 223334557889999999999999999999999999999999 99999765443333332222111
Q ss_pred cccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 638 IESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 638 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
+.... .....+.+++.+||+.+|.+|||++|+++.|+++.+.++.
T Consensus 286 ------~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 286 ------MAQPA----FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp ------CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCC----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 00111 1123678999999999999999999999999998876544
No 55
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.6e-35 Score=328.06 Aligned_cols=242 Identities=27% Similarity=0.416 Sum_probs=183.4
Q ss_pred hhhhccccCcEEEEEEEECC-ceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~-~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|.+.+ ..||||+++.... ..++|.+|+++|++++||||+++++++.+ +..++|||||++|+|
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 35789999999999999965 4899999986543 34689999999999999999999999976 678999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.......+++...+.++.+++ .+||||||+|||++.++.+||+|||+++...... ........+
T Consensus 266 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~~~~~~~~~ 343 (452)
T 1fmk_A 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAKF 343 (452)
T ss_dssp HHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------C
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc--eecccCCcc
Confidence 9999754333455555555544443 3999999999999999999999999998764221 112233456
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+..|+|||.+.+..++.++|||||||+||||+| |+.||...... +...... .+.. . ..+......
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i~-~~~~-----~----~~~~~~~~~ 409 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVE-RGYR-----M----PCPPECPES 409 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHH-TTCC-----C----CCCTTSCHH
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH-cCCC-----C----CCCCCCCHH
Confidence 789999999999999999999999999999999 99999765322 2222221 1110 0 111123346
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
+.+++.+||+.+|++|||++++++.|+++...
T Consensus 410 l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 78999999999999999999999999987743
No 56
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6e-35 Score=301.64 Aligned_cols=243 Identities=23% Similarity=0.366 Sum_probs=186.9
Q ss_pred hhhhccccCcEEEEEEEECCc-eEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~-~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|...+. .||||++..... ..+++.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcH
Confidence 457899999999999998654 899999976543 346799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.... ..+++...+.++.+ ...+||||||+||+++.++.+||+|||+++...... ........+
T Consensus 91 ~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~ 167 (268)
T 3sxs_A 91 LNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--YVSSVGTKF 167 (268)
T ss_dssp HHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--EEECCSCCC
T ss_pred HHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh--hhcccCCCc
Confidence 99986532 22444444444433 333999999999999999999999999998754322 222334456
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
++.|+|||.+.+..++.++||||||++++||+| |+.||....... ........ . ....+. . ....
T Consensus 168 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~~-~--~~~~~~---~----~~~~ 233 (268)
T 3sxs_A 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE----VVLKVSQG-H--RLYRPH---L----ASDT 233 (268)
T ss_dssp CGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHHHHHTT-C--CCCCCT---T----SCHH
T ss_pred CcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH----HHHHHHcC-C--CCCCCC---c----ChHH
Confidence 778999999999899999999999999999999 999997554321 11111111 1 011111 1 1235
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
+.+++.+|++.+|++|||++|+++.|+.+.+.+
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 789999999999999999999999998876543
No 57
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-34 Score=300.70 Aligned_cols=247 Identities=21% Similarity=0.368 Sum_probs=191.3
Q ss_pred hhccccCcEEEEEEEE----CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 432 RVLGNGGFGTVYHGYL----DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~----~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.||+|+||.||+|.. .+..||||++.... ....+++.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 4899999999999986 35589999998753 44567899999999999999999999999 556789999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... ..+++...+.++.+++ .+||||||+||+++.++.+||+|||+++...............
T Consensus 95 ~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 173 (287)
T 1u59_A 95 PLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 173 (287)
T ss_dssp EHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred CHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccc
Confidence 9999996532 2355555555444443 3999999999999999999999999998764433222222334
Q ss_pred cCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
.+|+.|+|||.+.+..++.++||||||++++||+| |+.||...... +..... ..+.. +.+. ....
T Consensus 174 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~i-~~~~~-----~~~~----~~~~ 239 (287)
T 1u59_A 174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVMAFI-EQGKR-----MECP----PECP 239 (287)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHHHHH-HTTCC-----CCCC----TTCC
T ss_pred cccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHH-hcCCc-----CCCC----CCcC
Confidence 56889999999998899999999999999999999 99999765432 111111 11111 1111 1223
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhhh
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETARL 694 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~~ 694 (723)
..+.+++.+|++.+|.+||++.++++.|++++.......
T Consensus 240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 240 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 467899999999999999999999999999987766543
No 58
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-34 Score=308.46 Aligned_cols=247 Identities=25% Similarity=0.383 Sum_probs=183.2
Q ss_pred hhhccccCcEEEEEEEECC------ceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 431 ERVLGNGGFGTVYHGYLDG------TEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~~------~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
.+.||+|+||.||+|.... ..||||++.... ......|.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4689999999999998732 259999998653 344567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... ..+++...+.++.++ ..+||||||+|||++.++.+||+|||+++............
T Consensus 129 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 207 (333)
T 1mqb_A 129 ENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207 (333)
T ss_dssp TTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------------
T ss_pred CCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccccccc
Confidence 9999999997642 235555554444443 33999999999999999999999999998764332222222
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
....+++.|+|||.+.+..++.++|||||||+++||++ |+.||...... +...... .+.. ... ..
T Consensus 208 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~----~~~~~~~-~~~~-----~~~----~~ 273 (333)
T 1mqb_A 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVMKAIN-DGFR-----LPT----PM 273 (333)
T ss_dssp ---CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----HHHHHHH-TTCC-----CCC----CT
T ss_pred CCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHH-CCCc-----CCC----cc
Confidence 33456788999999999999999999999999999999 99999654321 2122221 1110 001 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
.....+.+++.+||+.+|++||++.++++.|++++.....
T Consensus 274 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 2234678999999999999999999999999998865544
No 59
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.4e-35 Score=302.57 Aligned_cols=246 Identities=23% Similarity=0.325 Sum_probs=178.4
Q ss_pred HhhhhccccCcEEEEEEEEC-----CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 429 NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.+.||+|+||.||+|... +..||+|++.... ....+.|.+|+.++++++||||+++++++. .+..++||||
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 96 (281)
T 1mp8_A 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL 96 (281)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred EEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEec
Confidence 34678999999999999883 2369999987643 344567999999999999999999999984 4678999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 503 MANGNLQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
+++|+|.+++.... ..+++...+.++ |+...+||||||+|||++.++.+||+|||+++...... ...
T Consensus 97 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 173 (281)
T 1mp8_A 97 CTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--YYK 173 (281)
T ss_dssp CTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------------
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc--ccc
Confidence 99999999997542 234555444443 33334999999999999999999999999998764321 112
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
.....+++.|+|||.+.+..++.++||||||++++||++ |+.||....... ....+. .+.. ..+..
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~-~~~~i~----~~~~-----~~~~~--- 240 (281)
T 1mp8_A 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIE----NGER-----LPMPP--- 240 (281)
T ss_dssp -----CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHH----TTCC-----CCCCT---
T ss_pred cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH-HHHHHH----cCCC-----CCCCC---
Confidence 233456789999999998999999999999999999997 999997654332 222111 1111 11111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
.....+.+++.+|++.+|++|||+.|+++.|+++++.+++
T Consensus 241 -~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 280 (281)
T 1mp8_A 241 -NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280 (281)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 2234678999999999999999999999999999877654
No 60
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.3e-35 Score=304.57 Aligned_cols=243 Identities=26% Similarity=0.386 Sum_probs=184.7
Q ss_pred hhhhccccCcEEEEEEEECCc-eEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLDGT-EVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~-~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|...+. .||||++..... ..+++.+|++++++++|+||+++++++...+..++||||+++|+|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcH
Confidence 357899999999999998654 899999986543 246799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.... ..+++...+.++. +...+||||||+||+++.++.+||+|||+++...... ........+
T Consensus 107 ~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~ 183 (283)
T 3gen_A 107 LNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKF 183 (283)
T ss_dssp HHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH--HHSTTSTTS
T ss_pred HHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc--cccccCCcc
Confidence 99997532 2245444444433 3334999999999999999999999999998653211 111223456
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
|+.|+|||.+.+..++.++||||||++++||+| |+.||....... ...... .+. ....... ....
T Consensus 184 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~----~~~~~~-~~~-----~~~~~~~----~~~~ 249 (283)
T 3gen_A 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIA-QGL-----RLYRPHL----ASEK 249 (283)
T ss_dssp CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHHHHH-TTC-----CCCCCTT----CCHH
T ss_pred CcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH----HHHHHh-ccc-----CCCCCCc----CCHH
Confidence 778999999999999999999999999999998 999997654321 111111 110 0011111 1236
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
+.+++.+|++.+|.+|||++++++.|++++..+
T Consensus 250 l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 250 VYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 789999999999999999999999999988654
No 61
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-34 Score=302.75 Aligned_cols=247 Identities=29% Similarity=0.486 Sum_probs=177.3
Q ss_pred HhhhhccccCcEEEEEEEECCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYLDGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.+.||+|+||.||+|...+ .||||+++.. .....+.|.+|++++++++|+||+++++++ .....++||||++++
T Consensus 27 ~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 27 TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 345789999999999998765 5999998754 344567899999999999999999999976 455689999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... ..+++...+.++.+ ...+||||||+|||++.++.+||+|||+++....... .......
T Consensus 105 ~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~ 182 (289)
T 3og7_A 105 SLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQL 182 (289)
T ss_dssp EHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------
T ss_pred cHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccc-ccccccc
Confidence 9999996543 23555544444433 3339999999999999999999999999986543221 2223345
Q ss_pred cCCCccccccccc---cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 577 AGTPGYLDPEYYI---SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 577 ~gt~~y~aPE~~~---~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
.||+.|+|||.+. +..++.++||||||++++||++|+.||........+.+.+.. +... +.+. .....
T Consensus 183 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~----~~~~-~~~~~ 253 (289)
T 3og7_A 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR----GSLS----PDLS-KVRSN 253 (289)
T ss_dssp -CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH----TSCC----CCTT-SSCTT
T ss_pred CCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc----cccC----cchh-hcccc
Confidence 6899999999986 567889999999999999999999999765543333332222 1111 1110 11112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
....+.+++.+|++.+|.+|||++++++.|+++++
T Consensus 254 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 23468899999999999999999999999998763
No 62
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=312.78 Aligned_cols=233 Identities=19% Similarity=0.325 Sum_probs=172.4
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 457899999999999997 57799999987653 233457899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... .+++... +..+|+...+||||||+|||+++++.+||+|||++....... .......
T Consensus 94 ~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--~~~~~~~ 169 (347)
T 3zgw_A 94 ELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK--DYHLQTC 169 (347)
T ss_dssp BHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--------------
T ss_pred CHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC--Ccccccc
Confidence 9999986532 2333333 333444444999999999999999999999999987653221 1223445
Q ss_pred cCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 577 AGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
.||+.|+|||.+.+..+ +.++|||||||+|+||++|+.||...... +....... +.. .+.... .
T Consensus 170 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----~~~~~i~~-~~~------~~p~~~----s 234 (347)
T 3zgw_A 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM----ALYKKIMR-GKY------DVPKWL----S 234 (347)
T ss_dssp --CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH-TCC------CCCTTC----C
T ss_pred CCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHc-CCC------CCCCCC----C
Confidence 79999999999988775 89999999999999999999999764322 22222211 111 111111 2
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+|++.||.+|||++|+++
T Consensus 235 ~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 235 PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 35678999999999999999999986
No 63
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=333.03 Aligned_cols=242 Identities=20% Similarity=0.360 Sum_probs=184.0
Q ss_pred hccccCcEEEEEEEEC----CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 433 VLGNGGFGTVYHGYLD----GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~----~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
.||+|+||.||+|.+. +..||||+++... ....++|.+|+++|++++||||++++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999873 3479999998653 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.+++... ...+++...+.++.+++ .+||||||+|||++.++.+||+|||+++................
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 500 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCC
Confidence 99999754 33466666555555444 39999999999999999999999999987643322112222334
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVW 656 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~ 656 (723)
+++.|+|||.+.+..++.++|||||||+||||+| |+.||....... +. . .+..+... ..+.....
T Consensus 501 ~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~---~-~i~~~~~~---------~~p~~~~~ 566 (613)
T 2ozo_A 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VM---A-FIEQGKRM---------ECPPECPP 566 (613)
T ss_dssp -CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-HH---H-HHHTTCCC---------CCCTTCCH
T ss_pred CccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-HH---H-HHHcCCCC---------CCCCcCCH
Confidence 6689999999999999999999999999999998 999997654321 11 1 22222110 11112334
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 657 KTVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 657 ~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
.+.+++.+||+.+|++||++.+|++.|+++....
T Consensus 567 ~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 567 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 6889999999999999999999999999887544
No 64
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-34 Score=302.27 Aligned_cols=246 Identities=27% Similarity=0.362 Sum_probs=194.8
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|... +..||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 95 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEE
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCc
Confidence 4578999999999999995 66899999976543 45789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.+++.......+++...+.++.+++ .+||||||+||+++.++.+||+|||+++...... ........
T Consensus 96 L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~ 173 (288)
T 3kfa_A 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 173 (288)
T ss_dssp HHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--SEEETTEE
T ss_pred HHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc--cccccCCc
Confidence 99999876555566665554444333 3999999999999999999999999998764322 22334455
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVW 656 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~ 656 (723)
+++.|+|||.+.+..++.++||||||++++||++ |+.||...... ...+.+.. ... ... ......
T Consensus 174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-~~~~~~~~---~~~------~~~----~~~~~~ 239 (288)
T 3kfa_A 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEK---DYR------MER----PEGCPE 239 (288)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHT---TCC------CCC----CTTCCH
T ss_pred cccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhc---cCC------CCC----CCCCCH
Confidence 7789999999999999999999999999999999 99998765432 22222111 100 111 111234
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 657 KTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 657 ~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
.+.+++.+|++.+|.+|||++++++.|+++++....
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 678999999999999999999999999998876544
No 65
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.5e-35 Score=315.70 Aligned_cols=253 Identities=25% Similarity=0.336 Sum_probs=189.9
Q ss_pred hhhhccccCcEEEEEEEE------CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEe--cCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL------DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD--EGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~~lV~E 501 (723)
+.+.||+|+||.||++.+ .+..||||++........+.+.+|++++++++|+||+++++++. .....++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 457899999999999985 45689999999887777788999999999999999999999886 4566889999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|+++|+|.+++..... .+++...+.++.++ ..+||||||+|||++.++.+||+|||+++..........
T Consensus 107 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 185 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185 (327)
T ss_dssp CCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEE
T ss_pred ecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccce
Confidence 9999999999875321 24555544444333 339999999999999999999999999987654433222
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc----------ccHHHHHHHHhcCCCcccc
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER----------IHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~i 641 (723)
......++..|+|||.+.+..++.++|||||||+++||++|+.|+...... ......+......+
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 260 (327)
T 3lxl_A 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG----- 260 (327)
T ss_dssp CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT-----
T ss_pred eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc-----
Confidence 334456888899999999999999999999999999999999998643211 00011111111111
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
............+.+++.+|++.+|.+|||++|+++.|+.++.....
T Consensus 261 ----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 261 ----QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred ----cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 11111222334678999999999999999999999999998765543
No 66
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3e-34 Score=307.32 Aligned_cols=260 Identities=22% Similarity=0.313 Sum_probs=193.8
Q ss_pred HHHHHHHHHhhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHh--ccCCceeeEEEEEecCC----
Q 004935 421 SNVLRITNNFERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR--IHHKNLTTLVGYCDEGT---- 494 (723)
Q Consensus 421 ~~l~~~t~~f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~~---- 494 (723)
.+.....+.+.+.||+|+||.||+|..+++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 3344445556789999999999999999999999999643 34678889999988 79999999999998776
Q ss_pred ceEEEEEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHH--------hccccccCCCCCCEEEcCCCcEEEEe
Q 004935 495 NRGLIYEFMANGNLQALLLGEEADILSWEGR----------LRIAI--------EAAKVHRDVKSTNILLSGKFQAKIAD 556 (723)
Q Consensus 495 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~--------~~a~vH~Dlk~~NILl~~~~~~kl~D 556 (723)
..++||||+++|+|.+++... .+++... +..+| +...+||||||+|||++.++.+||+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 190 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECC
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEE
Confidence 789999999999999999764 2344333 34444 33449999999999999999999999
Q ss_pred ccCccccCCCCCCce-eeecccCCCccccccccccC------CCCChhhHHHHHHHHHHHHcC----------CCccccC
Q 004935 557 FGLSRTFPVEGSGTH-VTTTIAGTPGYLDPEYYISN------RLTEKSDVYNFGVVLLEIITS----------KSVIERT 619 (723)
Q Consensus 557 fGla~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~SfGvvL~elltg----------~~p~~~~ 619 (723)
||+++.......... ......||+.|+|||.+.+. .++.++|||||||++|||+|| +.||...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 999987643322111 22345799999999998765 234789999999999999999 6777654
Q ss_pred cccc-cHHHHHHHHhcCCCcccccCCcccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 620 HERI-HITQWVSFMLGKGDIESIVDPRLHED-FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 620 ~~~~-~~~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.... ....+.... ..... .+.+... ...+....+.+++.+||+.+|++|||+++|++.|+++.+.+.
T Consensus 271 ~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 271 VPSDPSVEEMRKVV-CEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp SCSSCCHHHHHHHH-TTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred CcCcccHHHHHHHH-HHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 3222 222322222 22111 1222211 123566788999999999999999999999999999876544
No 67
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8e-35 Score=309.40 Aligned_cols=248 Identities=26% Similarity=0.416 Sum_probs=176.2
Q ss_pred HhhhhccccCcEEEEEEEECCc-----eEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCce-----
Q 004935 429 NFERVLGNGGFGTVYHGYLDGT-----EVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNR----- 496 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~~-----~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~----- 496 (723)
.+.+.||+|+||.||+|..... .||||++... .....++|.+|++++++++||||+++++++......
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPI 105 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------C
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCc
Confidence 3467899999999999987432 7999999765 334567899999999999999999999999877665
Q ss_pred -EEEEEeCCCCCHHHHhccC----CCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCcc
Q 004935 497 -GLIYEFMANGNLQALLLGE----EADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSR 561 (723)
Q Consensus 497 -~lV~Ey~~~gsL~~~l~~~----~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~ 561 (723)
++||||+++|+|.+++... ....+++...+.++.++ ..+||||||+|||+++++.+||+|||+++
T Consensus 106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~ 185 (323)
T 3qup_A 106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185 (323)
T ss_dssp EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence 8999999999999998643 11235555554444433 33999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCccc
Q 004935 562 TFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIES 640 (723)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (723)
....... ........+++.|+|||.+.+..++.++|||||||+++||++ |+.||....... ... ........
T Consensus 186 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~---~~~~~~~~-- 258 (323)
T 3qup_A 186 KIYSGDY-YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYN---YLIGGNRL-- 258 (323)
T ss_dssp ----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHH---HHHTTCCC--
T ss_pred ccccccc-ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHH---HHhcCCCC--
Confidence 7543221 122234456789999999999999999999999999999999 899987654322 111 11111110
Q ss_pred ccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 641 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.. .......+.+++.+|++.+|++|||+.++++.|+++++-..
T Consensus 259 ----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 259 ----KQ----PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp ----CC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ----CC----CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 11 11122467899999999999999999999999999986543
No 68
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.5e-35 Score=314.40 Aligned_cols=258 Identities=17% Similarity=0.213 Sum_probs=190.0
Q ss_pred hhhhccccCcEEEEEEEEC-------CceEEEEEecCCChhhH-----------HHHHHHHHHHHhccCCceeeEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLD-------GTEVAVKMLSPSSAQGY-----------KQFQAEVELLMRIHHKNLTTLVGYCD 491 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-------~~~vavK~~~~~~~~~~-----------~~f~~Ei~~l~~l~H~nIv~l~g~~~ 491 (723)
+.+.||+|+||.||+|.+. ++.||||++........ ..+..|+..+++++|+||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 4678999999999999883 35899999876653211 12345566677778999999999987
Q ss_pred cC----CceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEc--CCCcEEEE
Q 004935 492 EG----TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLS--GKFQAKIA 555 (723)
Q Consensus 492 ~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~--~~~~~kl~ 555 (723)
.. ...++||||+ +++|.+++... ...+++...+.++.+++. +||||||+|||++ .++.+||+
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~ 196 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLV 196 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEEC
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEE
Confidence 64 4579999999 99999999764 234666666555555443 9999999999999 88999999
Q ss_pred eccCccccCCCCCCc----eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHH
Q 004935 556 DFGLSRTFPVEGSGT----HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631 (723)
Q Consensus 556 DfGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~ 631 (723)
|||+++.+....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...............
T Consensus 197 DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~ 276 (364)
T 3op5_A 197 DYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKI 276 (364)
T ss_dssp CCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHH
T ss_pred ECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHH
Confidence 999998764322111 1113345999999999999999999999999999999999999999865443333333332
Q ss_pred HhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhh
Q 004935 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETAR 693 (723)
Q Consensus 632 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~ 693 (723)
.... .+..++++.+... .....+.+++..|++.+|.+||+++++++.|++++......
T Consensus 277 ~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 277 RYRE-NIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp HHHH-CHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred Hhhh-hHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 2221 2333333333211 12236789999999999999999999999999999765543
No 69
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-34 Score=302.75 Aligned_cols=243 Identities=22% Similarity=0.342 Sum_probs=182.1
Q ss_pred HhhhhccccCcEEEEEEEECC---------ceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYLDG---------TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~---------~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV 499 (723)
.+.+.||+|+||.||+|.... ..||+|++........+.|.+|++++++++||||+++++++...+..++|
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 90 (289)
T 4fvq_A 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILV 90 (289)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEE
T ss_pred eeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEE
Confidence 346789999999999998732 46999999876666678899999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCc--------EEEEeccCcc
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQ--------AKIADFGLSR 561 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~--------~kl~DfGla~ 561 (723)
|||+++|+|.+++..... .+++...+.++. +...+||||||+|||++.++. +||+|||+++
T Consensus 91 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~ 169 (289)
T 4fvq_A 91 QEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI 169 (289)
T ss_dssp EECCTTCBHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCT
T ss_pred EECCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccc
Confidence 999999999999976432 244444444333 333499999999999998887 9999999987
Q ss_pred ccCCCCCCceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCccc
Q 004935 562 TFPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIES 640 (723)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (723)
.... .....+++.|+|||.+.+ ..++.++|||||||+++||++|..|+......... ............
T Consensus 170 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~ 239 (289)
T 4fvq_A 170 TVLP-------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK---LQFYEDRHQLPA 239 (289)
T ss_dssp TTSC-------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---HHHHHTTCCCCC
T ss_pred cccC-------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH---HHHhhccCCCCC
Confidence 6421 123457889999999987 67999999999999999999966554333221111 111111111111
Q ss_pred ccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhhh
Q 004935 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETARL 694 (723)
Q Consensus 641 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~~ 694 (723)
.. ...+.+++.+||+.+|++|||++|+++.|++++.-..+..
T Consensus 240 ----~~--------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~ 281 (289)
T 4fvq_A 240 ----PK--------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPR 281 (289)
T ss_dssp ----CS--------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-------
T ss_pred ----CC--------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCC
Confidence 11 1146799999999999999999999999999887555443
No 70
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-36 Score=316.49 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=172.8
Q ss_pred HhhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHh--ccCCceeeEEEEEecCC----ceEEEEEe
Q 004935 429 NFERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMR--IHHKNLTTLVGYCDEGT----NRGLIYEF 502 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~~----~~~lV~Ey 502 (723)
.+.+.||+|+||.||+|..+++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..++||||
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 82 (303)
T 3gxj_A 6 VLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp CCCEEEEECSSSEEEEC-CTTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred eehhhccCCCCeEEEEEEEcCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEec
Confidence 346789999999999999999999999987543 3567788888887 79999999999998776 78999999
Q ss_pred CCCCCHHHHhccCCC---C----CCCHHHHHHHHH--------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 004935 503 MANGNLQALLLGEEA---D----ILSWEGRLRIAI--------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~---~----~l~~~~~l~i~~--------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 567 (723)
+++|+|.+++..... . ..+....+..+| +...+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~ 162 (303)
T 3gxj_A 83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp CTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTT
T ss_pred cCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCC
Confidence 999999999975421 1 123334444445 4444999999999999999999999999997654332
Q ss_pred CCc-eeeecccCCCccccccccccC------CCCChhhHHHHHHHHHHHHcC----------CCccccCcccc-cHHHHH
Q 004935 568 SGT-HVTTTIAGTPGYLDPEYYISN------RLTEKSDVYNFGVVLLEIITS----------KSVIERTHERI-HITQWV 629 (723)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DV~SfGvvL~elltg----------~~p~~~~~~~~-~~~~~~ 629 (723)
... .......||+.|+|||.+.+. .++.++|||||||++|||+|| +.||....... ...+..
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (303)
T 3gxj_A 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242 (303)
T ss_dssp TEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CH
T ss_pred cccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHH
Confidence 211 112334699999999998766 445689999999999999999 55554322111 111111
Q ss_pred HHHhcCCCcccccCCcccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 630 SFMLGKGDIESIVDPRLHED-FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 630 ~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
... .... ..+.+... ...+....+.+++.+||+.+|++|||+++|++.|+++.+.+.
T Consensus 243 ~~~-~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 243 KVV-CEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHH-TTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred HHH-HHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 111 1111 11111111 122566789999999999999999999999999998876554
No 71
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.1e-34 Score=309.51 Aligned_cols=251 Identities=16% Similarity=0.199 Sum_probs=190.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++..... .+.+.+|+++++++ +|+||+++++++...+..++||||+ ++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GP 89 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CC
Confidence 357899999999999996 577999999875432 24688999999999 9999999999999999999999999 99
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCc-----EEEEeccCccccCCCCCCce
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQ-----AKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~-----~kl~DfGla~~~~~~~~~~~ 571 (723)
+|.+++... ...+++...+.++.+++ .+||||||+|||++.++. +||+|||+++..........
T Consensus 90 ~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~ 168 (330)
T 2izr_A 90 SLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH 168 (330)
T ss_dssp BHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB
T ss_pred CHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc
Confidence 999999764 23456655555544443 399999999999999887 99999999987643322111
Q ss_pred ----eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCccc
Q 004935 572 ----VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLH 647 (723)
Q Consensus 572 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~ 647 (723)
......||+.|+|||.+.+..++.++|||||||+++||++|+.||...... ...+........ ..... ...+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~-~~~~~~~~i~~~-~~~~~-~~~~~ 245 (330)
T 2izr_A 169 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD-TLKERYQKIGDT-KRATP-IEVLC 245 (330)
T ss_dssp CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS-SHHHHHHHHHHH-HHHSC-HHHHT
T ss_pred ccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc-cHHHHHHHHHhh-hccCC-HHHHh
Confidence 124567999999999999999999999999999999999999999865432 222211111100 00000 00000
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 648 EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 648 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
.. .. .+.+++.+|++.+|.+||+++++++.|+++......
T Consensus 246 ~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 246 EN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp TT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 11 12 788999999999999999999999999988765544
No 72
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-34 Score=304.58 Aligned_cols=256 Identities=22% Similarity=0.296 Sum_probs=185.3
Q ss_pred HHHHhhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhc--cCCceeeEEEEEecC----CceEEE
Q 004935 426 ITNNFERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRI--HHKNLTTLVGYCDEG----TNRGLI 499 (723)
Q Consensus 426 ~t~~f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l--~H~nIv~l~g~~~~~----~~~~lV 499 (723)
..+.+.+.||+|+||.||+|...++.||||++.... ...+..|.+++..+ +||||+++++++... ...++|
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred cceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 344456899999999999999999999999986432 34455566666554 999999999999877 678999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhc--------cccccCCCCCCEEEcCCCcEEEEeccCcc
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGR----------LRIAIEA--------AKVHRDVKSTNILLSGKFQAKIADFGLSR 561 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~--------a~vH~Dlk~~NILl~~~~~~kl~DfGla~ 561 (723)
|||+++|+|.+++.... +++... +..+|.. ..+||||||+|||++.++.+||+|||+++
T Consensus 114 ~e~~~~g~L~~~l~~~~---~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 114 TDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp ECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EeccCCCcHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 99999999999997542 344333 4444444 45999999999999999999999999998
Q ss_pred ccCCCCCCce-eeecccCCCccccccccccCCCCCh------hhHHHHHHHHHHHHcC----------CCccccCccccc
Q 004935 562 TFPVEGSGTH-VTTTIAGTPGYLDPEYYISNRLTEK------SDVYNFGVVLLEIITS----------KSVIERTHERIH 624 (723)
Q Consensus 562 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~------~DV~SfGvvL~elltg----------~~p~~~~~~~~~ 624 (723)
.......... ......||+.|+|||.+.+.....+ +|||||||++|||+|| +.||........
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 270 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence 7643322111 1234579999999999987766654 9999999999999999 566654332222
Q ss_pred HHHHHHHHhcCCCcccccCCcccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 625 ITQWVSFMLGKGDIESIVDPRLHED-FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 625 ~~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.............. .+.+... ...+....+.+++.+||+.+|++|||+.||++.|+.+.+.+.
T Consensus 271 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 271 SYEDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CHHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred chhhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 22222222222111 1111111 122566778999999999999999999999999999886543
No 73
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-34 Score=305.72 Aligned_cols=247 Identities=28% Similarity=0.398 Sum_probs=189.4
Q ss_pred hhhhccccCcEEEEEEEE-------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCC-ceEEE
Q 004935 430 FERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGT-NRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~-~~~lV 499 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|+++++++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 457899999999999985 23589999998654 34456899999999999 7999999999987654 48999
Q ss_pred EEeCCCCCHHHHhccCCCC--------------CCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEE
Q 004935 500 YEFMANGNLQALLLGEEAD--------------ILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIA 555 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~--------------~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~ 555 (723)
|||+++|+|.+++...... .+++...+.++. +...+||||||+||+++.++.+||+
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~ 190 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEC
Confidence 9999999999999765321 245444444433 3334999999999999999999999
Q ss_pred eccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhc
Q 004935 556 DFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLG 634 (723)
Q Consensus 556 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 634 (723)
|||+++....... ........+|+.|+|||.+.+..++.++|||||||+++||+| |+.||............+..
T Consensus 191 Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~--- 266 (316)
T 2xir_A 191 DFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE--- 266 (316)
T ss_dssp CCGGGSCTTTCTT-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH---
T ss_pred CCccccccccCcc-ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc---
Confidence 9999987643322 223344567889999999999999999999999999999998 99999765433222222211
Q ss_pred CCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 635 KGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 635 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
+.. ...... ....+.+++.+|++.+|.+|||+.|+++.|+++++..
T Consensus 267 -~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 267 -GTR-----MRAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp -TCC-----CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -Ccc-----CCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 111 111111 1235789999999999999999999999999998654
No 74
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.3e-34 Score=301.45 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=185.0
Q ss_pred HhhhhccccCcEEEEEEEE------CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecC--CceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL------DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG--TNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~------~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~lV 499 (723)
...+.||+|+||.||+|.+ .++.||||++.... ....+.+.+|++++++++||||+++++++... ...++|
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 103 (302)
T 4e5w_A 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103 (302)
T ss_dssp EEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEE
T ss_pred hhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEE
Confidence 3457899999999999984 46699999997543 33457899999999999999999999999876 668999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+++|+|.+++..... .+++...+.++. +...+||||||+|||++.++.+||+|||+++........
T Consensus 104 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 182 (302)
T 4e5w_A 104 MEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY 182 (302)
T ss_dssp EECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE
T ss_pred EEeCCCCcHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcc
Confidence 999999999999954322 244444444333 333499999999999999999999999999876544332
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCc-----------ccccHHHHHHHHhcCCCc
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTH-----------ERIHITQWVSFMLGKGDI 638 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~-----------~~~~~~~~~~~~~~~~~~ 638 (723)
........+|..|+|||.+.+..++.++||||||++++||+||+.|+.... .......... ....+..
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 261 (302)
T 4e5w_A 183 YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN-TLKEGKR 261 (302)
T ss_dssp EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH-HHHTTCC
T ss_pred eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH-HHhccCC
Confidence 233445668888999999999999999999999999999999999864321 1111111111 1111110
Q ss_pred ccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 004935 639 ESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687 (723)
Q Consensus 639 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~ 687 (723)
..........+.+++.+|++.+|.+|||++++++.|++++
T Consensus 262 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 262 ---------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp ---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111122346789999999999999999999999999876
No 75
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=313.54 Aligned_cols=240 Identities=20% Similarity=0.313 Sum_probs=181.2
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.+.||+|+||.||+|.. ++..||+|++........+.|.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 35799999999999998 4679999999887767778899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEE--cCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 509 QALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILL--SGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl--~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
.+++.... ..+++...+.+ +|+...+||||||+|||+ +.++.+||+|||+++...... .....
T Consensus 174 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----~~~~~ 248 (373)
T 2x4f_A 174 FDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----KLKVN 248 (373)
T ss_dssp HHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----BCCCC
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----ccccc
Confidence 99886532 22444444433 333344999999999999 567899999999998764322 22345
Q ss_pred cCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHH
Q 004935 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVW 656 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~ 656 (723)
.||+.|+|||.+.+..++.++|||||||+++||++|+.||........+..+... .... .+...... ..
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~---~~~~----~~~~~~~~----~~ 317 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC---RWDL----EDEEFQDI----SE 317 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT---CCCS----CSGGGTTS----CH
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---cCCC----ChhhhccC----CH
Confidence 6999999999999899999999999999999999999999765433222222211 1000 01111111 23
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHH--HHHHh
Q 004935 657 KTVEIAMACVSQTSTKRPTMNQVVM--ELNES 686 (723)
Q Consensus 657 ~l~~l~~~Cl~~~p~~RPsm~evl~--~L~~~ 686 (723)
.+.+++.+|++.+|.+|||++|+++ .+++.
T Consensus 318 ~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 318 EAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 6789999999999999999999997 55554
No 76
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.9e-34 Score=306.75 Aligned_cols=249 Identities=27% Similarity=0.415 Sum_probs=192.1
Q ss_pred HhhhhccccCcEEEEEEEEC---------CceEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceE
Q 004935 429 NFERVLGNGGFGTVYHGYLD---------GTEVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRG 497 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~---------~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~ 497 (723)
.+.+.||+|+||.||+|... +..||||++.... ....+.+.+|+++++++ +||||++++++|...+..+
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 117 (334)
T 2pvf_A 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117 (334)
T ss_dssp EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCE
T ss_pred EEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceE
Confidence 34678999999999999863 3479999997653 34567899999999999 9999999999999999999
Q ss_pred EEEEeCCCCCHHHHhccCCC--------------CCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEE
Q 004935 498 LIYEFMANGNLQALLLGEEA--------------DILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAK 553 (723)
Q Consensus 498 lV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~k 553 (723)
+||||+++|+|.+++..... ..+++...+.++.+++ .+||||||+|||++.++.+|
T Consensus 118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 197 (334)
T 2pvf_A 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMK 197 (334)
T ss_dssp EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEE
Confidence 99999999999999976432 2356655555544443 39999999999999999999
Q ss_pred EEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHH
Q 004935 554 IADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFM 632 (723)
Q Consensus 554 l~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~ 632 (723)
|+|||+++....... ........+++.|+|||.+.+..++.++|||||||+++||++ |+.||..... .+.....
T Consensus 198 L~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~~ 272 (334)
T 2pvf_A 198 IADFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----EELFKLL 272 (334)
T ss_dssp ECCCTTCEECTTTSS-EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHHH
T ss_pred Ecccccccccccccc-ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH----HHHHHHH
Confidence 999999987643221 122234457789999999998899999999999999999999 9999875432 1222211
Q ss_pred hcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 633 LGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 633 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
. .+.. +.... .....+.+++.+|++.+|.+|||++|+++.|++++.....
T Consensus 273 ~-~~~~-----~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 273 K-EGHR-----MDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp H-HTCC-----CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred h-cCCC-----CCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 1 1111 11111 1223678999999999999999999999999999876544
No 77
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=305.46 Aligned_cols=238 Identities=22% Similarity=0.309 Sum_probs=182.4
Q ss_pred HHHhhhhccccCcEEEEEEEEC--CceEEEEEecCCChh------hHHHHHHHHHHHHhccCCceeeEEEEEecCCceEE
Q 004935 427 TNNFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQ------GYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~l 498 (723)
.+.+.+.||+|+||.||++... +..||+|++...... ..+.+.+|+++|++++||||+++++++......++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3455689999999999999984 679999998754321 35789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCC----cEEEEeccCccccC
Q 004935 499 IYEFMANGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFP 564 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~----~~kl~DfGla~~~~ 564 (723)
||||+++|+|.+++.... .+++.....+ +|+...+||||||+|||++.++ .+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 92 ILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 999999999999997542 3444444333 3333349999999999999887 89999999998764
Q ss_pred CCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCC
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 644 (723)
... ......||+.|+|||.+.+..++.++|||||||+++||++|+.||........+ ...... .. . ..+
T Consensus 170 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~~~~~-~~-~-~~~ 238 (326)
T 2y0a_A 170 FGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANVSAV-NY-E-FED 238 (326)
T ss_dssp TTS----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHHT-CC-C-CCH
T ss_pred CCC----ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH----HHHHhc-CC-C-cCc
Confidence 321 123457999999999999999999999999999999999999999765332211 111111 00 0 000
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..... ....+.+++.+|++.+|.+|||++|+++
T Consensus 239 ~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 239 EYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccc----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00011 1235779999999999999999999987
No 78
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.8e-34 Score=301.95 Aligned_cols=247 Identities=21% Similarity=0.305 Sum_probs=179.4
Q ss_pred hhhhccccCcEEEEEEEE-CCceEEEEEecCCCh--hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||+|++..... ...+.+.+|++++++++||||+++++++......++||||+++
T Consensus 25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 357899999999999998 567999999975432 2346789999999999999999999999999999999999985
Q ss_pred CHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++..... .++.... +..+|+...+||||||+|||++.++.+||+|||+++...... ......
T Consensus 104 ~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~ 179 (311)
T 3niz_A 104 DLKKVLDENKT-GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---RSYTHE 179 (311)
T ss_dssp EHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC---C---CC
T ss_pred CHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc---ccccCC
Confidence 88887765432 2343333 333444444999999999999999999999999998764221 223345
Q ss_pred cCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--cccccC------Ccc-
Q 004935 577 AGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IESIVD------PRL- 646 (723)
Q Consensus 577 ~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i~d------~~l- 646 (723)
.+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+............ .....+ ...
T Consensus 180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T 3niz_A 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQ 259 (311)
T ss_dssp CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC
T ss_pred cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccc
Confidence 68999999999876 56899999999999999999999999876655444443332211110 000000 000
Q ss_pred -cCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 647 -HEDFD-----INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 647 -~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..... ......+.+++.+|++.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000 011235789999999999999999999886
No 79
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9.6e-35 Score=301.91 Aligned_cols=238 Identities=26% Similarity=0.375 Sum_probs=178.3
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecC-CceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG-TNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|...++.||||++.... ..+.|.+|++++++++||||+++++++... +..++||||+++|+|
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 45789999999999999999999999997654 346799999999999999999999997554 578999999999999
Q ss_pred HHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.......+++...+. .+|+...+||||||+||+++.++.+||+|||+++..... .....+
T Consensus 103 ~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------QDTGKL 176 (278)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------------C
T ss_pred HHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc------ccCCCc
Confidence 9998754322234433333 333334499999999999999999999999998764321 123357
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
++.|+|||.+.+..++.++||||||++++||+| |+.||....... ... . ...+. .+.... .....
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~---~-~~~~~-----~~~~~~----~~~~~ 242 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVP---R-VEKGY-----KMDAPD----GCPPA 242 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-HHH---H-HTTTC-----CCCCCT----TCCHH
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---H-HhcCC-----CCCCcc----cCCHH
Confidence 889999999999999999999999999999998 999987653321 111 1 11111 111111 22346
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
+.+++.+|++.+|.+|||+.|+++.|+++...
T Consensus 243 l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 243 VYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 78999999999999999999999999987643
No 80
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-34 Score=307.07 Aligned_cols=237 Identities=21% Similarity=0.314 Sum_probs=178.1
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh-hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA-QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 357899999999999998 467999999875433 23466899999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... .+++.....++ |+...+||||||+|||++.++.+||+|||+++.+..... .......
T Consensus 91 ~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~ 167 (323)
T 3tki_A 91 ELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKM 167 (323)
T ss_dssp EGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE-ECCBCSC
T ss_pred cHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCc-ccccCCC
Confidence 9999987542 24444443333 333349999999999999999999999999986543221 2223456
Q ss_pred cCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 577 AGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
.||+.|+|||.+.+..+ +.++|||||||+++||++|+.||........... . ....... ..+ .....
T Consensus 168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--~-~~~~~~~---~~~------~~~~~ 235 (323)
T 3tki_A 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D-WKEKKTY---LNP------WKKID 235 (323)
T ss_dssp CSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH--H-HHTTCTT---STT------GGGSC
T ss_pred ccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--H-Hhccccc---CCc------cccCC
Confidence 79999999999987775 7799999999999999999999976543321111 1 1111100 000 01122
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+|++.+|++|||++|+++
T Consensus 236 ~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 236 SAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhh
Confidence 35679999999999999999999876
No 81
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-34 Score=305.13 Aligned_cols=249 Identities=25% Similarity=0.387 Sum_probs=188.4
Q ss_pred hhhhccccCcEEEEEEEE------CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCC--ceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL------DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT--NRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~------~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~lV~E 501 (723)
+.+.||+|+||.||++.. +++.||||++........+.|.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 457899999999999985 46699999998877677788999999999999999999999986654 6899999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|+++|+|.+++.... ..+++...+.++.+++ .+||||||+||+++.++.+||+|||+++..........
T Consensus 125 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~ 203 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 203 (326)
T ss_dssp CCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEE
T ss_pred CCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccc
Confidence 999999999997653 2355555544444433 39999999999999999999999999987654332122
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc-----------ccHHHHHHHHhcCCCccc
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER-----------IHITQWVSFMLGKGDIES 640 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 640 (723)
......++..|+|||.+.+..++.++||||||++++||+||+.|+...... ......+...+..+..
T Consensus 204 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (326)
T 2w1i_A 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR-- 281 (326)
T ss_dssp CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC--
T ss_pred cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC--
Confidence 223445777899999999888999999999999999999999987632110 0001111111111110
Q ss_pred ccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 641 IVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 641 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
..........+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 282 -------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 282 -------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp -------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01111223468899999999999999999999999998764
No 82
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.8e-34 Score=333.40 Aligned_cols=240 Identities=25% Similarity=0.384 Sum_probs=181.2
Q ss_pred hhccccCcEEEEEEEE----CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 432 RVLGNGGFGTVYHGYL----DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~----~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.||+|+||.||+|.+ .+..||||+++... ....++|.+|+++|++++||||++++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999976 24589999997643 3346789999999999999999999999964 568899999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
|+|.+++.... .+++...+.++.++ ..+||||||+|||++.++.+||+|||+++.+............
T Consensus 454 g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 454 GPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 99999997542 35555544444443 3399999999999999999999999999876543322223334
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
..+|+.|+|||.+.+..++.++|||||||+|+||++ |+.||...... + +...+..+... .. +...
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~----~-~~~~i~~~~~~-----~~----p~~~ 597 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----E-VTAMLEKGERM-----GC----PAGC 597 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----H-HHHHHHTTCCC-----CC----CTTC
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----H-HHHHHHcCCCC-----CC----CCCC
Confidence 457789999999999999999999999999999998 99999765432 1 11222222111 11 1122
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
...+.+++.+||+.+|++||++++|++.|+++..
T Consensus 598 ~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 598 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999998764
No 83
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-34 Score=305.39 Aligned_cols=235 Identities=15% Similarity=0.220 Sum_probs=181.6
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||++.. ++..||+|.+.... .....+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~ 87 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD 87 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCB
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCC
Confidence 457899999999999998 46699999987554 344678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcC--CCcEEEEeccCccccCCCCCCceeeec
Q 004935 508 LQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSG--KFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
|.+++.... ..+++..... .+|+...+||||||+|||++. ++.+||+|||+++..... .....
T Consensus 88 L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~ 162 (321)
T 1tki_A 88 IFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG----DNFRL 162 (321)
T ss_dssp HHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT----CEEEE
T ss_pred HHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC----Ccccc
Confidence 999997542 2244443333 333334499999999999997 789999999999876432 22344
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
..+|+.|+|||.+.+..++.++|||||||+++||++|+.||...... +......... .. .++..... ..
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~-~~--~~~~~~~~----~s 231 (321)
T 1tki_A 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ----QIIENIMNAE-YT--FDEEAFKE----IS 231 (321)
T ss_dssp EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHHTC-CC--CCHHHHTT----SC
T ss_pred ccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH----HHHHHHHcCC-CC--CChhhhcc----CC
Confidence 57899999999999888999999999999999999999999765432 2222221111 00 00000011 12
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+|++.+|.+|||+.|+++
T Consensus 232 ~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 232 IEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 35789999999999999999999987
No 84
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-34 Score=312.59 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=193.3
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCC--ceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT--NRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 4578999999999999984 6799999997543 234567889999999999999999999997765 6799999999
Q ss_pred CCCHHHHhccCCC-CCCCHHHHHHHHHhcc----------ccccCCCCCCEEE----cCCCcEEEEeccCccccCCCCCC
Q 004935 505 NGNLQALLLGEEA-DILSWEGRLRIAIEAA----------KVHRDVKSTNILL----SGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 505 ~gsL~~~l~~~~~-~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl----~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
+|+|.+++..... ..+++...+.++.+++ .+||||||+|||+ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~--- 169 (396)
T 4eut_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD--- 169 (396)
T ss_dssp TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG---
T ss_pred CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC---
Confidence 9999999976432 2255555544444433 3999999999999 77888999999999876422
Q ss_pred ceeeecccCCCcccccccccc--------CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC---c
Q 004935 570 THVTTTIAGTPGYLDPEYYIS--------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD---I 638 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 638 (723)
.......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..........+.+........ +
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (396)
T 4eut_A 170 -EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248 (396)
T ss_dssp -GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCC
T ss_pred -CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccc
Confidence 12234568999999999865 56788999999999999999999999765433333333333332211 1
Q ss_pred cccc-----------CCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 639 ESIV-----------DPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 639 ~~i~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
..+. +..............+.+++.+|++.||++||++.|+++.++++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0000 00111223355677788999999999999999999999999998864
No 85
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.3e-34 Score=299.13 Aligned_cols=244 Identities=24% Similarity=0.361 Sum_probs=184.8
Q ss_pred hccccCcEEEEEEEE----CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 433 VLGNGGFGTVYHGYL----DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~----~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.||+|+||.||+|.+ .+..||||++.... ....++|.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 899999999999965 24589999997653 23357899999999999999999999999 567789999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++.... .+++...+.++.+ ...+||||||+||+++.++.+||+|||+++...............
T Consensus 103 ~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 180 (291)
T 1xbb_A 103 PLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180 (291)
T ss_dssp EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred CHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccC
Confidence 9999997642 2444444444333 333999999999999999999999999998765433222222334
Q ss_pred cCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
.+++.|+|||.+.+..++.++||||||++++||++ |+.||...... +. ...+..+.. +.... ...
T Consensus 181 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~-~~~~~~~~~-----~~~~~----~~~ 246 (291)
T 1xbb_A 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----EV-TAMLEKGER-----MGCPA----GCP 246 (291)
T ss_dssp CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HH-HHHHHTTCC-----CCCCT----TCC
T ss_pred CCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HH-HHHHHcCCC-----CCCCC----CCC
Confidence 56789999999998889999999999999999999 99999764331 11 112222111 11111 223
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhh
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETAR 693 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~ 693 (723)
..+.+++.+|++.+|.+||++.++++.|+++.......
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 46789999999999999999999999999998776553
No 86
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-34 Score=309.82 Aligned_cols=236 Identities=23% Similarity=0.311 Sum_probs=181.5
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChh------hHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ------GYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
.+.+.||+|+||.||++.. ++..||+|++...... ..+.+.+|+.+|++++||||+++++++.+.+..++||
T Consensus 15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 94 (361)
T 2yab_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLIL 94 (361)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEE
Confidence 3467899999999999998 4679999999764321 3567999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCC----cEEEEeccCccccCCC
Q 004935 501 EFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFPVE 566 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~----~~kl~DfGla~~~~~~ 566 (723)
||+++|+|.+++.... .+++... +..+|+...+||||||+|||++.++ .+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~ 172 (361)
T 2yab_A 95 ELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172 (361)
T ss_dssp ECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC
Confidence 9999999999997542 3444433 3333444449999999999998876 7999999999876432
Q ss_pred CCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcc
Q 004935 567 GSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRL 646 (723)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l 646 (723)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ...... .+... .++..
T Consensus 173 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~----~~~~i~-~~~~~--~~~~~ 241 (361)
T 2yab_A 173 V----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANIT-AVSYD--FDEEF 241 (361)
T ss_dssp C----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHH-TTCCC--CCHHH
T ss_pred C----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHH-hcCCC--CCchh
Confidence 1 2234579999999999999999999999999999999999999997654321 111111 11100 01111
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 647 HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
... ....+.+++.+|+..+|.+|||++|+++
T Consensus 242 ~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 FSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 1235779999999999999999999985
No 87
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.5e-34 Score=297.52 Aligned_cols=237 Identities=30% Similarity=0.512 Sum_probs=180.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhh-------HHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQG-------YKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-------~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
+.+.||+|+||.||+|.. +++.||||++....... .+.+.+|++++++++||||+++++++.+.. ++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEE
Confidence 457899999999999998 56799999986543211 167899999999999999999999986654 6999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhcc--ccccCCCCCCEEEcCCCc-----EEEEeccCcccc
Q 004935 501 EFMANGNLQALLLGEEADILSWEGR----------LRIAIEAA--KVHRDVKSTNILLSGKFQ-----AKIADFGLSRTF 563 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a--~vH~Dlk~~NILl~~~~~-----~kl~DfGla~~~ 563 (723)
||+++|+|.+++.... ..+++... +..+|+.. .+||||||+|||++.++. +||+|||+++..
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~ 179 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179 (287)
T ss_dssp ECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCC
T ss_pred EecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccc
Confidence 9999999998886543 23444443 44455555 699999999999988776 999999999754
Q ss_pred CCCCCCceeeecccCCCccccccccc--cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccc
Q 004935 564 PVEGSGTHVTTTIAGTPGYLDPEYYI--SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 641 (723)
.. ......+|+.|+|||.+. ...++.++|||||||+++||++|+.||....... ..........+.
T Consensus 180 ~~------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~---- 247 (287)
T 4f0f_A 180 VH------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK--IKFINMIREEGL---- 247 (287)
T ss_dssp SS------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH--HHHHHHHHHSCC----
T ss_pred cc------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH--HHHHHHHhccCC----
Confidence 21 234467899999999984 4567899999999999999999999997654321 111222211111
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHh
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNES 686 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~ 686 (723)
.+.+.. .....+.+++.+||+.+|.+|||++|+++.|+++
T Consensus 248 -~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 -RPTIPE----DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -CCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -CCCCCc----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111222 2234678999999999999999999999999863
No 88
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.1e-34 Score=303.70 Aligned_cols=247 Identities=22% Similarity=0.394 Sum_probs=182.0
Q ss_pred hhhhccccCcEEEEEEEEC--Cc----eEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLD--GT----EVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~----~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|.+. +. .||+|.+.... ....+.+.+|+.++++++||||++++++|. ....++|+||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 3578999999999999973 33 38888876443 233456789999999999999999999986 4668899999
Q ss_pred CCCCCHHHHhccCCC-----CCCCH----HHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 503 MANGNLQALLLGEEA-----DILSW----EGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~-----~~l~~----~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
+++|+|.+++..... ..+.| ...+..+|+...+||||||+|||++.++.+||+|||+++....... ....
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 174 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-QLLY 174 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT-CCC-
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc-cccc
Confidence 999999999875421 11222 2334444444459999999999999999999999999998654332 2233
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .....+. .+... ..+..
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~----~~~~~--~~~~~------ 241 (325)
T 3kex_A 175 SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-EVPDLLE----KGERL--AQPQI------ 241 (325)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-HHHHHHH----TTCBC--CCCTT------
T ss_pred cCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-HHHHHHH----cCCCC--CCCCc------
Confidence 45568889999999999999999999999999999999 99999765432 1222111 11100 00111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
....+.+++.+||+.+|.+|||++++++.|+.+......
T Consensus 242 -~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~ 280 (325)
T 3kex_A 242 -CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR 280 (325)
T ss_dssp -BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHH
T ss_pred -CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 111356899999999999999999999999998765543
No 89
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-34 Score=309.31 Aligned_cols=237 Identities=19% Similarity=0.254 Sum_probs=183.9
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.+.||+|+||.||+|.. +++.||+|++..........+.+|+++|++++||||+++++++.+....++||||+++|
T Consensus 54 ~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg 133 (387)
T 1kob_A 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133 (387)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCC
Confidence 3467899999999999998 46699999998776666678999999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcC--CCcEEEEeccCccccCCCCCCceeee
Q 004935 507 NLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSG--KFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|.+++.... ..+++.....+ +|+...+||||||+|||++. ++.+||+|||+++...... ...
T Consensus 134 ~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~----~~~ 208 (387)
T 1kob_A 134 ELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IVK 208 (387)
T ss_dssp BHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----CEE
T ss_pred cHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc----cee
Confidence 9999987542 23444444333 33333499999999999974 4789999999998764322 223
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||+++||++|+.||....... ......... . ..++..... .
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~----~~~~i~~~~-~--~~~~~~~~~----~ 277 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE----TLQNVKRCD-W--EFDEDAFSS----V 277 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH----HHHHHHHCC-C--CCCSSTTTT----S
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH----HHHHHHhCC-C--CCCcccccc----C
Confidence 4579999999999999999999999999999999999999997654321 111111111 0 011111111 2
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+||+.+|.+|||++|+++
T Consensus 278 s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 278 SPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 236789999999999999999999987
No 90
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.3e-34 Score=296.25 Aligned_cols=245 Identities=24% Similarity=0.330 Sum_probs=184.6
Q ss_pred hhhhccccCcEEEEEEEECC-----ceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLDG-----TEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~-----~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|...+ ..||+|.+... .....+.|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 35789999999999998732 25999999865 34456789999999999999999999999865 4568999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++++|.+++.... ..+++..... .+|+...+||||||+||+++.++.+||+|||+++...... ....
T Consensus 95 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 171 (281)
T 3cc6_A 95 PYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED--YYKA 171 (281)
T ss_dssp TTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----------
T ss_pred CCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccc--cccc
Confidence 9999999997532 2244444333 3344444999999999999999999999999998764321 1122
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
....+++.|+|||.+.+..++.++||||||++++||+| |+.||....... ....+.. ... ......
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~-~~~~~~~---~~~------~~~~~~--- 238 (281)
T 3cc6_A 172 SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-VIGVLEK---GDR------LPKPDL--- 238 (281)
T ss_dssp -CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG-HHHHHHH---TCC------CCCCTT---
T ss_pred ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH-HHHHHhc---CCC------CCCCCC---
Confidence 34457889999999998999999999999999999998 999997544322 2221111 110 001111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
....+.+++.+|++.+|++|||+.|+++.|+++.+.+..
T Consensus 239 -~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 239 -CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp -CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 223578999999999999999999999999999887653
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=312.72 Aligned_cols=238 Identities=22% Similarity=0.319 Sum_probs=180.9
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.+.||+|+||.||++.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 92 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 92 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeC
Confidence 34568899999999999987 57799999987654 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHH----------HHHHHHHhccccccCCCCCCEEEc---CCCcEEEEeccCccccCCCCCCc
Q 004935 504 ANGNLQALLLGEEADILSWE----------GRLRIAIEAAKVHRDVKSTNILLS---GKFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~----------~~l~i~~~~a~vH~Dlk~~NILl~---~~~~~kl~DfGla~~~~~~~~~~ 570 (723)
++|+|.+.+..... ++.. ..+..+|+...+||||||+|||++ .++.+||+|||+++......
T Consensus 93 ~gg~L~~~i~~~~~--~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~--- 167 (444)
T 3soa_A 93 TGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--- 167 (444)
T ss_dssp BCCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---
T ss_pred CCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---
Confidence 99999998876432 3333 233444444459999999999998 46789999999998764322
Q ss_pred eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
.......||+.|+|||.+.+..++.++||||+||+++||++|+.||........ ..... .+.. ....+.. ..
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~----~~~i~-~~~~-~~~~~~~-~~- 239 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL----YQQIK-AGAY-DFPSPEW-DT- 239 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHH-HTCC-CCCTTTT-TT-
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH----HHHHH-hCCC-CCCcccc-cc-
Confidence 223446799999999999999999999999999999999999999976543221 11111 1111 0001111 11
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+|++.||++|||+.|+++
T Consensus 240 ---~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 240 ---VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ---SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1235779999999999999999999986
No 92
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.7e-35 Score=330.80 Aligned_cols=242 Identities=27% Similarity=0.419 Sum_probs=187.4
Q ss_pred HhhhhccccCcEEEEEEEECC-ceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~~-~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
.+.+.||+|+||.||+|.+.+ ..||||+++.... ..++|.+|+++|++++|+||++++++|.+ +..++|||||++|+
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gs 347 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 347 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCc
Confidence 346789999999999999965 4899999986543 34689999999999999999999999976 67899999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.+++.......+++...+.++.+++ .+||||||+|||+++++.+||+|||+++...... ........
T Consensus 348 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~ 425 (535)
T 2h8h_A 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--YTARQGAK 425 (535)
T ss_dssp HHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH--HHTTCSTT
T ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc--eecccCCc
Confidence 99999754333455555555544443 3999999999999999999999999998753210 11122345
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVW 656 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~ 656 (723)
++..|+|||.+.+..++.++|||||||+||||+| |+.||...... +...... .+.. . ........
T Consensus 426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----~~~~~i~-~~~~-----~----~~~~~~~~ 491 (535)
T 2h8h_A 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVE-RGYR-----M----PCPPECPE 491 (535)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH----HHHHHHH-TTCC-----C----CCCTTCCH
T ss_pred CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH-cCCC-----C----CCCCCCCH
Confidence 6788999999999999999999999999999999 89999765322 2222221 1110 0 11112234
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 657 KTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 657 ~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
.+.+++.+||+.+|++|||++++++.|+++..
T Consensus 492 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 492 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 67899999999999999999999999998764
No 93
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.2e-35 Score=307.39 Aligned_cols=246 Identities=22% Similarity=0.344 Sum_probs=173.5
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCce----EEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNR----GLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~----~lV 499 (723)
.+.+.||+|+||.||+|.. +++.||||++.... ......|.+|++++++++||||+++++++...... ++|
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv 94 (311)
T 3ork_A 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEE
Confidence 3467899999999999997 56799999997653 33456789999999999999999999998765544 899
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+++|+|.+++.... .+++...+. .+|+...+||||||+|||++.++.+||+|||+++........
T Consensus 95 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 172 (311)
T 3ork_A 95 MEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172 (311)
T ss_dssp EECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC---------
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc
Confidence 99999999999987532 234443333 333444499999999999999999999999999876443322
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .............. ......
T Consensus 173 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~---~~~~~~ 245 (311)
T 3ork_A 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV----SVAYQHVREDPIPP---SARHEG 245 (311)
T ss_dssp ---------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHCCCCCH---HHHSTT
T ss_pred cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCCCCCc---ccccCC
Confidence 23334456899999999999999999999999999999999999999765432 22222222211100 000011
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHH-HHHHHhh
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVV-MELNESL 687 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl-~~L~~~~ 687 (723)
....+.+++.+||+.+|.+||++.+++ ..|....
T Consensus 246 ----~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 246 ----LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 123577999999999999999766544 4554443
No 94
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.2e-34 Score=298.03 Aligned_cols=242 Identities=28% Similarity=0.385 Sum_probs=186.0
Q ss_pred hhhhccccCcEEEEEEEECC-ceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYLDG-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~-~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|...+ ..||||++..... ..+.|.+|++++++++||||+++++++. .+..++||||+++++|
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L 94 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 94 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCH
Confidence 45789999999999999865 4899999976542 3578999999999999999999999986 4568999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.......+++...+.++.++ ..+||||||+||++++++.+||+|||+++...... ........+
T Consensus 95 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~ 172 (279)
T 1qpc_A 95 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--YTAREGAKF 172 (279)
T ss_dssp HHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--EECCTTCCC
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc--cccccCCCC
Confidence 999875432235555544444433 33999999999999999999999999998764321 122233456
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+..|+|||.+.+..++.++||||||++++||++ |+.||...... +.......... +.... .....
T Consensus 173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~~~~~------~~~~~----~~~~~ 238 (279)
T 1qpc_A 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR------MVRPD----NCPEE 238 (279)
T ss_dssp CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----HHHHHHHTTCC------CCCCT----TCCHH
T ss_pred ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----HHHHHHhcccC------CCCcc----cccHH
Confidence 788999999998899999999999999999999 89998754322 22222211100 11111 12246
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
+.+++.+|++.+|++|||++++++.|+++...
T Consensus 239 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 78999999999999999999999999998754
No 95
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.2e-34 Score=297.89 Aligned_cols=244 Identities=27% Similarity=0.438 Sum_probs=180.7
Q ss_pred hhhhccccCcEEEEEEEECC-----ceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEe-cCCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLDG-----TEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCD-EGTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~-----~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~-~~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|...+ ..||+|.+.... ....+.+.+|++++++++||||++++++|. ..+..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 45789999999999998732 258999987643 345678999999999999999999999864 45678999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC-Cce
Q 004935 503 MANGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS-GTH 571 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~ 571 (723)
+++|+|.+++.... ..+++...+.+ +|+...+||||||+|||+++++.+||+|||+++....... ...
T Consensus 109 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 187 (298)
T 3f66_A 109 MKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187 (298)
T ss_dssp CTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-
T ss_pred CCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccc
Confidence 99999999997542 22344444333 3334449999999999999999999999999987543211 112
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCC-CccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSK-SVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
......+|+.|+|||.+.+..++.++||||||++++||++|. +|+..... ......... +.. ...+ ..
T Consensus 188 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~~~~~~~~----~~~--~~~~---~~- 256 (298)
T 3f66_A 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQ----GRR--LLQP---EY- 256 (298)
T ss_dssp ----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-TTHHHHHHT----TCC--CCCC---TT-
T ss_pred cccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-HHHHHHHhc----CCC--CCCC---cc-
Confidence 233456788999999999999999999999999999999954 55544332 222222111 110 0001 11
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
....+.+++.+|++.+|.+|||++|+++.|++++.
T Consensus 257 ---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 257 ---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 12367899999999999999999999999999875
No 96
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.7e-34 Score=299.54 Aligned_cols=249 Identities=15% Similarity=0.201 Sum_probs=189.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++..... .+.+.+|+++++++ +|+|++.+++++......++||||+ ++
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 90 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP 90 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CC
Confidence 457899999999999996 577999999865432 24688999999999 8999999999999999999999999 99
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCc-----EEEEeccCccccCCCCCCc-
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQ-----AKIADFGLSRTFPVEGSGT- 570 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~-----~kl~DfGla~~~~~~~~~~- 570 (723)
+|.+++..... .+++...+.++.+++ .+||||||+|||++.++. +||+|||+++.........
T Consensus 91 ~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 169 (298)
T 1csn_A 91 SLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH 169 (298)
T ss_dssp BHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB
T ss_pred CHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc
Confidence 99999976432 355555555444443 399999999999987776 9999999998765432211
Q ss_pred ---eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHH--HHHHhcCCCcccccCCc
Q 004935 571 ---HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQW--VSFMLGKGDIESIVDPR 645 (723)
Q Consensus 571 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~i~d~~ 645 (723)
.......||+.|+|||.+.+..++.++|||||||+++||++|+.||............ +.......... .
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 244 (298)
T 1csn_A 170 IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR-----E 244 (298)
T ss_dssp CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH-----H
T ss_pred ccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHH-----H
Confidence 1234567999999999999999999999999999999999999999765432221111 11111111110 1
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 646 LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 646 l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
+... ....+.+++.+|++.+|++||++++|++.|++++....
T Consensus 245 ~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 245 LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 1111 12367899999999999999999999999999886443
No 97
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.7e-34 Score=311.77 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=182.7
Q ss_pred hhhhcccc--CcEEEEEEEEC--CceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNG--GFGTVYHGYLD--GTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G--~~g~Vy~~~~~--~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+| +||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||||
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 46789999 99999999984 6799999997542 444567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC----
Q 004935 504 ANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG---- 569 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~---- 569 (723)
++|+|.+++.......+++.....++. +...+||||||+|||++.++.+||+|||.+.........
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~ 188 (389)
T 3gni_B 109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 188 (389)
T ss_dssp TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCB
T ss_pred CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccccccc
Confidence 999999999876444455554444433 333399999999999999999999999998754322110
Q ss_pred ceeeecccCCCcccccccccc--CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC---------CC-
Q 004935 570 THVTTTIAGTPGYLDPEYYIS--NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK---------GD- 637 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~~- 637 (723)
........||+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+.......... ..
T Consensus 189 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (389)
T 3gni_B 189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEEL 268 (389)
T ss_dssp CCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------
T ss_pred ccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccc
Confidence 111223468899999999987 579999999999999999999999997654433222211110000 00
Q ss_pred ------------ccccc---CCcc------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 638 ------------IESIV---DPRL------HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 638 ------------~~~i~---d~~l------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
..... .+.. ...........+.+++.+||+.||++|||++|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 269 TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00000 0000 000111123457899999999999999999999853
No 98
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9.3e-34 Score=306.16 Aligned_cols=238 Identities=23% Similarity=0.381 Sum_probs=181.7
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.+.+.||+|+||.||+|.. ++..||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 344568899999999999998 4679999999754 334557799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCC---CcEEEEeccCccccCCCCCC
Q 004935 503 MANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGK---FQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~---~~~kl~DfGla~~~~~~~~~ 569 (723)
+++|+|.+++.... .+++... +..+|+...+||||||+|||++.+ +.+||+|||+++......
T Consensus 110 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~-- 185 (362)
T 2bdw_A 110 VTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-- 185 (362)
T ss_dssp CCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC--
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc--
Confidence 99999999887542 2343333 334444444999999999999865 459999999998764221
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... +...... .+... ...+.. .
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----~~~~~i~-~~~~~-~~~~~~-~- 255 (362)
T 2bdw_A 186 --AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----RLYAQIK-AGAYD-YPSPEW-D- 255 (362)
T ss_dssp --SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH-HTCCC-CCTTGG-G-
T ss_pred --ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHH-hCCCC-CCcccc-c-
Confidence 223467999999999999989999999999999999999999999764332 1111111 11110 000111 1
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+||+.+|.+|||+.|+++
T Consensus 256 ---~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 256 ---TVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ---GSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 12235779999999999999999999875
No 99
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-33 Score=295.89 Aligned_cols=245 Identities=25% Similarity=0.369 Sum_probs=185.0
Q ss_pred hhhccccCcEEEEEEEE--CCc---eEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCce-EEEEEeC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGT---EVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNR-GLIYEFM 503 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~---~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~-~lV~Ey~ 503 (723)
.+.||+|+||.||+|.. ++. .||+|++.... ....+.|.+|++++++++||||+++++++...+.. ++|+||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 47899999999999986 222 69999997644 34567899999999999999999999999776665 9999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC-Ccee
Q 004935 504 ANGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS-GTHV 572 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~-~~~~ 572 (723)
.+|+|.+++.... ..+++...+.+ +|+...+||||||+|||++.++.+||+|||+++....... ....
T Consensus 106 ~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 184 (298)
T 3pls_A 106 CHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ 184 (298)
T ss_dssp TTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCC
T ss_pred cCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccccc
Confidence 9999999997642 23444444333 3333349999999999999999999999999986532211 1122
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
.....+++.|+|||.+.+..++.++||||||++++||++|+.|+............+..... .....
T Consensus 185 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---- 251 (298)
T 3pls_A 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR---------LPQPE---- 251 (298)
T ss_dssp SSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC---------CCCCT----
T ss_pred CcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC---------CCCCc----
Confidence 23456788999999999999999999999999999999976665444333333332221110 00111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
.....+.+++.+|++.+|.+|||++++++.|++++..
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1223678999999999999999999999999998754
No 100
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.8e-33 Score=297.13 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=179.7
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCC---ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
.+.+.||+|+||.||+|.. ++..||||++... .......+.+|++++++++||||+++++++...+..++||||+
T Consensus 35 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 114 (310)
T 2wqm_A 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELA 114 (310)
T ss_dssp EEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecC
Confidence 3467899999999999997 5779999999753 3445678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccC--CCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 504 ANGNLQALLLGE--EADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 504 ~~gsL~~~l~~~--~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
++|+|.+++... ....+++...+.+ +++...+||||||+||+++.++.+||+|||+++...... .
T Consensus 115 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~---~ 191 (310)
T 2wqm_A 115 DAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---T 191 (310)
T ss_dssp CSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--------------
T ss_pred CCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC---c
Confidence 999999998642 2233444444333 333344999999999999999999999999998653221 1
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
......+++.|+|||.+.+..++.++||||||++++||++|+.||..... .......... ........ ...
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~-~~~~~~~~----~~~-- 262 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIE-QCDYPPLP----SDH-- 262 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C--CHHHHHHHHH-TTCSCCCC----TTT--
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch--hHHHHHHHhh-cccCCCCc----ccc--
Confidence 22345689999999999999999999999999999999999999865432 2222222221 11111110 011
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhhhh
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETARLK 695 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~~~ 695 (723)
....+.+++.+||+.+|.+|||+++|++.|+++.+..+....
T Consensus 263 --~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 263 --YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred --cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 123578999999999999999999999999999877766543
No 101
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-33 Score=304.54 Aligned_cols=240 Identities=20% Similarity=0.317 Sum_probs=180.6
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC-----hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEE
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-----AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV 499 (723)
.+.+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 445578999999999999998 46799999985321 12357799999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHhccC--CCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCc---EEEEeccCccccC
Q 004935 500 YEFMANGNLQALLLGE--EADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFP 564 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~--~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~---~kl~DfGla~~~~ 564 (723)
|||+++|+|.+++... ....++.... +..+|+...+||||||+|||++.++. +||+|||+++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~ 184 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence 9999999998877543 2222343333 33444444499999999999986654 9999999998764
Q ss_pred CCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCC
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 644 (723)
... .......||+.|+|||.+.+..++.++|||||||+++||++|+.||..... +....... +... .++
T Consensus 185 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~i~~-~~~~--~~~ 253 (351)
T 3c0i_A 185 ESG---LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFEGIIK-GKYK--MNP 253 (351)
T ss_dssp TTS---CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----HHHHHHHH-TCCC--CCH
T ss_pred CCC---eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----HHHHHHHc-CCCC--CCc
Confidence 321 223445799999999999999999999999999999999999999976432 11111111 1110 011
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..... ....+.+++.+||+.+|++|||+.|+++
T Consensus 254 ~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 RQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11011 1235779999999999999999999986
No 102
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=306.33 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=179.6
Q ss_pred hhhhccccCcEEEEEEEE--CCc----eEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYL--DGT----EVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~----~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|.. +++ .||+|.+... .....+.+.+|+.++++++||||++++++|.... .++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 357899999999999997 333 4688887644 3345678999999999999999999999998755 7899999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 503 MANGNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
+++|+|.+++..... .+++...+. .+|+...+||||||+|||++.++.+||+|||+++....... ...
T Consensus 98 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~-~~~ 175 (327)
T 3lzb_A 98 MPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYH 175 (327)
T ss_dssp CSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-------------
T ss_pred cCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc-ccc
Confidence 999999999976432 244443333 33334449999999999999999999999999987643322 222
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
.....+|+.|+|||.+.+..++.++|||||||+++||++ |+.||...... .+...+. .+.. ... .
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~~~----~~~~-----~~~----~ 241 (327)
T 3lzb_A 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILE----KGER-----LPQ----P 241 (327)
T ss_dssp ----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHH----TTCC-----CCC----C
T ss_pred ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHH----cCCC-----CCC----C
Confidence 233456789999999999999999999999999999999 99999765432 2222221 1110 001 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
......+.+++.+||+.+|.+||+++|+++.|+++......
T Consensus 242 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 282 (327)
T 3lzb_A 242 PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 282 (327)
T ss_dssp TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCc
Confidence 11223578999999999999999999999999998865543
No 103
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8e-34 Score=303.34 Aligned_cols=232 Identities=23% Similarity=0.318 Sum_probs=180.1
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||++.. +++.||+|+++... ......+.+|+++|++++||||+++++++...+..++||||++
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 357899999999999998 46799999997532 2234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCH----------HHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSW----------EGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~----------~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .++. ...+..+|+...+||||||+|||++.++.+||+|||+++...... ....
T Consensus 89 gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~~~ 163 (337)
T 1o6l_A 89 GGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMK 163 (337)
T ss_dssp TCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---CCBC
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC---Cccc
Confidence 999999987532 2222 233444445555999999999999999999999999998643221 2234
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +........ . ..+....
T Consensus 164 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~~~-~------~~~p~~~---- 228 (337)
T 1o6l_A 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFELILME-E------IRFPRTL---- 228 (337)
T ss_dssp CCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHC-C------CCCCTTS----
T ss_pred ccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----HHHHHHHcC-C------CCCCCCC----
Confidence 567999999999999999999999999999999999999999754321 222222111 1 1111112
Q ss_pred HHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRP-----TMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RP-----sm~evl~ 681 (723)
...+.+++.+|++.+|++|| +++|+++
T Consensus 229 s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 229 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 23577999999999999999 8888875
No 104
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.6e-34 Score=295.39 Aligned_cols=241 Identities=27% Similarity=0.451 Sum_probs=186.5
Q ss_pred hhhhccccCcEEEEEEEE-CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 430 FERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.+.||+|+||.||+|.. +++.||+|++..... ..+++.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcH
Confidence 457899999999999998 566899999986543 346799999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 509 QALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
.+++.... ..+++...+.++. +...+||||||+||+++.++.+||+|||+++...... ........+
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~ 167 (267)
T 3t9t_A 91 SDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--YTSSTGTKF 167 (267)
T ss_dssp HHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH--HHSTTSTTC
T ss_pred HHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc--ccccccccc
Confidence 99997642 2344444444433 3334999999999999999999999999998653210 111223456
Q ss_pred CCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 579 TPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 579 t~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+..|+|||.+.+..++.++||||||++++||++ |+.||..... .+...... .+.. ...+. .....
T Consensus 168 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~i~-~~~~--~~~~~-------~~~~~ 233 (267)
T 3t9t_A 168 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDIS-TGFR--LYKPR-------LASTH 233 (267)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHH-TTCC--CCCCT-------TSCHH
T ss_pred cccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH----HHHHHHHh-cCCc--CCCCc-------cCcHH
Confidence 778999999998999999999999999999999 8999875432 12222221 1110 00111 11236
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
+.+++.+|++.+|++|||++++++.|+++.+
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 234 VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 7899999999999999999999999998875
No 105
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-34 Score=308.57 Aligned_cols=244 Identities=27% Similarity=0.442 Sum_probs=174.4
Q ss_pred hhhhccccCcEEEEEEEEC--C---ceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEec-CCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLD--G---TEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDE-GTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~---~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|.+. + ..||||.+.... ....++|.+|+.++++++||||++++++|.. .+..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 3578999999999999872 2 268999987543 3456789999999999999999999999754 4578999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC-ce
Q 004935 503 MANGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG-TH 571 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-~~ 571 (723)
+++|+|.+++..... .+++...+.+ +|+...+||||||+|||++.++.+||+|||+++........ ..
T Consensus 173 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~ 251 (373)
T 3c1x_A 173 MKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251 (373)
T ss_dssp CTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------
T ss_pred CCCCCHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccccc
Confidence 999999999975432 2344444333 33334499999999999999999999999999865332211 11
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
......+++.|+|||.+.+..++.++|||||||++|||+| |.+||...... .....+. .+. ....+ .
T Consensus 252 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-~~~~~~~----~~~--~~~~p---~-- 319 (373)
T 3c1x_A 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLL----QGR--RLLQP---E-- 319 (373)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-CHHHHHH----TTC--CCCCC---T--
T ss_pred ccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-HHHHHHH----cCC--CCCCC---C--
Confidence 2234457789999999999999999999999999999999 66677654332 2222221 111 00111 1
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
.....+.+++.+||+.+|.+|||++|+++.|++++.
T Consensus 320 --~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 320 --YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 122367899999999999999999999999998874
No 106
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.2e-33 Score=299.86 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=172.2
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCCh-hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA-QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 86 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD- 86 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-
Confidence 3467899999999999987 467999999875532 234678899999999999999999999999999999999999
Q ss_pred CCHHHHhccC----CCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 506 GNLQALLLGE----EADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 506 gsL~~~l~~~----~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|+|.+++... ....+.+... +..+|+...+||||||+|||++.++.+||+|||+++...... .
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---~ 163 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV---N 163 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC---C
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc---c
Confidence 5999988643 1223444433 333444444999999999999999999999999998764221 1
Q ss_pred eeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--cccc-----cC
Q 004935 572 VTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IESI-----VD 643 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i-----~d 643 (723)
......+|+.|+|||.+.+. .++.++|||||||+++||++|+.||........+.......-.... ...+ ..
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T 2pmi_A 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN 243 (317)
T ss_dssp CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC
T ss_pred cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcc
Confidence 22345689999999998764 6899999999999999999999999766543333322222111100 0000 00
Q ss_pred CcccC------------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 PRLHE------------DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~~l~~------------~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.+.. .........+.+++.+|++.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 244 PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 000012236789999999999999999998875
No 107
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=306.33 Aligned_cols=234 Identities=23% Similarity=0.342 Sum_probs=165.2
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|... ++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 134 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE 134 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCC
Confidence 4578999999999999994 5689999997643 34678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcC---CCcEEEEeccCccccCCCCCCceeee
Q 004935 508 LQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSG---KFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~---~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
|.+++.... .+++.....+ +|+...+||||||+|||++. ++.+||+|||+++..... ....
T Consensus 135 L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~----~~~~ 208 (349)
T 2w4o_A 135 LFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ----VLMK 208 (349)
T ss_dssp HHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------
T ss_pred HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc----cccc
Confidence 999987542 2444444333 33333499999999999975 889999999999875321 1223
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ..... ..... ...+ ... +.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~i~-~~~~~-~~~~-~~~----~~ 278 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM---FRRIL-NCEYY-FISP-WWD----EV 278 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH---HHHHH-TTCCC-CCTT-TTT----TS
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH---HHHHH-hCCCc-cCCc-hhh----hC
Confidence 457899999999999999999999999999999999999999755432211 11111 11110 0111 111 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|++|||+.|+++
T Consensus 279 ~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 279 SLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 336789999999999999999999886
No 108
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.3e-34 Score=298.45 Aligned_cols=233 Identities=23% Similarity=0.334 Sum_probs=172.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChh--------------------------hHHHHHHHHHHHHhccCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ--------------------------GYKQFQAEVELLMRIHHK 481 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--------------------------~~~~f~~Ei~~l~~l~H~ 481 (723)
+.+.||+|+||.||+|.. +++.||||++...... ..+.+.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 457899999999999988 4679999998754311 135689999999999999
Q ss_pred ceeeEEEEEec--CCceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCC
Q 004935 482 NLTTLVGYCDE--GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGK 549 (723)
Q Consensus 482 nIv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~ 549 (723)
||+++++++.. ....++||||+++|+|.+++... .+++.....++ |+...+||||||+|||++.+
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~ 173 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED 173 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC
Confidence 99999999976 56789999999999998865432 34444443333 33334999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCC---CCChhhHHHHHHHHHHHHcCCCccccCcccccHH
Q 004935 550 FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNR---LTEKSDVYNFGVVLLEIITSKSVIERTHERIHIT 626 (723)
Q Consensus 550 ~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~ 626 (723)
+.+||+|||+++...... .......||+.|+|||.+.+.. ++.++|||||||+++||++|+.||..... .
T Consensus 174 ~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~ 246 (298)
T 2zv2_A 174 GHIKIADFGVSNEFKGSD---ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI----M 246 (298)
T ss_dssp SCEEECCCTTCEECSSSS---CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH----H
T ss_pred CCEEEecCCCcccccccc---ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH----H
Confidence 999999999998764321 2234567999999999997765 47889999999999999999999975432 1
Q ss_pred HHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 627 QWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 627 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....... ...... +. ... ....+.+++.+||+.+|++|||++|+++
T Consensus 247 ~~~~~~~-~~~~~~---~~-~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 247 CLHSKIK-SQALEF---PD-QPD----IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHH-HCCCCC---CS-SSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHh-cccCCC---CC-ccc----cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2221111 111110 00 111 1235789999999999999999999874
No 109
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-34 Score=306.81 Aligned_cols=252 Identities=15% Similarity=0.154 Sum_probs=189.2
Q ss_pred hhhhccccCcEEEEEEEEC----------CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceee--------------
Q 004935 430 FERVLGNGGFGTVYHGYLD----------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTT-------------- 485 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~----------~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~-------------- 485 (723)
+.+.||+|+||.||+|... ++.||||++... +.+.+|++++++++||||++
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 4578999999999999984 568999998754 35889999999999999987
Q ss_pred -EEEEEec-CCceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCC--c
Q 004935 486 -LVGYCDE-GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKF--Q 551 (723)
Q Consensus 486 -l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~--~ 551 (723)
+++++.. ....++||||+ +|+|.+++.......+++...+.++.+++. +||||||+|||++.++ .
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~ 199 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQ 199 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEE
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCce
Confidence 6777766 77889999999 999999998654445666666555555443 9999999999999998 9
Q ss_pred EEEEeccCccccCCCCCCc----eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcc-cccHH
Q 004935 552 AKIADFGLSRTFPVEGSGT----HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHE-RIHIT 626 (723)
Q Consensus 552 ~kl~DfGla~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~-~~~~~ 626 (723)
+||+|||+++.+....... .......||+.|+|||.+.+..++.++|||||||+++||++|+.||..... ...+.
T Consensus 200 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 279 (352)
T 2jii_A 200 VTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIM 279 (352)
T ss_dssp EEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHH
Confidence 9999999998764322111 112345799999999999999999999999999999999999999986542 22222
Q ss_pred HHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 627 QWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 627 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
......... .....++..... .....+.+++.+|++.+|++|||++++++.|+++++....
T Consensus 280 ~~~~~~~~~--~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 280 KQKQKFVDK--PGPFVGPCGHWI---RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHS--CCCEECTTSCEE---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHhccCC--hhhhhhhccccC---CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 222221111 111111111100 1123678999999999999999999999999998866543
No 110
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.6e-34 Score=302.91 Aligned_cols=236 Identities=19% Similarity=0.285 Sum_probs=174.8
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCC------------
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT------------ 494 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------------ 494 (723)
+.+.||+|+||.||+|+. +++.||||++.... ....+.+.+|+++|++++||||++++++|.+..
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 457899999999999998 47799999997543 335578999999999999999999999986543
Q ss_pred ---------------------------------------------ceEEEEEeCCCCCHHHHhccCCC-CCCCH------
Q 004935 495 ---------------------------------------------NRGLIYEFMANGNLQALLLGEEA-DILSW------ 522 (723)
Q Consensus 495 ---------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~-~~l~~------ 522 (723)
..++||||+++|+|.+++..... ....+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i 169 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI 169 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHH
Confidence 27899999999999999986532 22232
Q ss_pred H----HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc---------eeeecccCCCccccccccc
Q 004935 523 E----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT---------HVTTTIAGTPGYLDPEYYI 589 (723)
Q Consensus 523 ~----~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~ 589 (723)
. ..+..+|+...+||||||+|||++.++.+||+|||+++......... .......||+.|+|||.+.
T Consensus 170 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 249 (332)
T 3qd2_B 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH 249 (332)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHH
T ss_pred HHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhc
Confidence 2 23334444444999999999999999999999999998765432111 1223456999999999999
Q ss_pred cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCC
Q 004935 590 SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQT 669 (723)
Q Consensus 590 ~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~ 669 (723)
+..++.++|||||||+++||++|..|+.... .... ....... +. ........+.+++.+|++.+
T Consensus 250 ~~~~~~~~Di~slG~il~el~~~~~~~~~~~------~~~~-~~~~~~~-----~~----~~~~~~~~~~~li~~~l~~~ 313 (332)
T 3qd2_B 250 GNNYSHKVDIFSLGLILFELLYSFSTQMERV------RIIT-DVRNLKF-----PL----LFTQKYPQEHMMVQDMLSPS 313 (332)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------HHHH-HHHTTCC-----CH----HHHHHCHHHHHHHHHHHCSS
T ss_pred CCCCcchhhHHHHHHHHHHHHHcCCChhHHH------HHHH-HhhccCC-----Cc----ccccCChhHHHHHHHHccCC
Confidence 9999999999999999999999987753211 1111 1111111 00 01122345679999999999
Q ss_pred CCCCCCHHHHHH
Q 004935 670 STKRPTMNQVVM 681 (723)
Q Consensus 670 p~~RPsm~evl~ 681 (723)
|++|||++|+++
T Consensus 314 p~~Rps~~~~l~ 325 (332)
T 3qd2_B 314 PTERPEATDIIE 325 (332)
T ss_dssp GGGSCCHHHHHH
T ss_pred CCcCCCHHHHhh
Confidence 999999999986
No 111
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=305.11 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=178.7
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHH--HHhccCCceeeEEEEEec-----CCceEEEEEe
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVEL--LMRIHHKNLTTLVGYCDE-----GTNRGLIYEF 502 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~--l~~l~H~nIv~l~g~~~~-----~~~~~lV~Ey 502 (723)
+.+.||+|+||.||+|..+++.||||++.... ...+..|.++ +..++|+||+++++++.. ....++||||
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSLDERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeeecccCCCeEEEEEEECCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 35789999999999999999999999997543 2344444444 556899999999986532 3356899999
Q ss_pred CCCCCHHHHhccCCCC-------CCCHHHHHHHHHhc---------cccccCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 004935 503 MANGNLQALLLGEEAD-------ILSWEGRLRIAIEA---------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVE 566 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~-------~l~~~~~l~i~~~~---------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 566 (723)
+++|+|.+++...... ..+....+..+|.. ..+||||||+|||++.++.+||+|||+++.+...
T Consensus 94 ~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~ 173 (336)
T 3g2f_A 94 YPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173 (336)
T ss_dssp CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred CCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccc
Confidence 9999999999765321 11223344555555 5699999999999999999999999999876432
Q ss_pred CC-----CceeeecccCCCcccccccccc-------CCCCChhhHHHHHHHHHHHHcCCCccccCccccc----------
Q 004935 567 GS-----GTHVTTTIAGTPGYLDPEYYIS-------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIH---------- 624 (723)
Q Consensus 567 ~~-----~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~---------- 624 (723)
.. .........||+.|+|||.+.+ ..++.++|||||||++|||++|+.|+........
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~ 253 (336)
T 3g2f_A 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVG 253 (336)
T ss_dssp SCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHC
T ss_pred cccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccC
Confidence 11 1112234569999999999876 4567899999999999999999887643321111
Q ss_pred ---HHHHHHHHhcCCCcccccCCcccCC--CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 625 ---ITQWVSFMLGKGDIESIVDPRLHED--FDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 625 ---~~~~~~~~~~~~~~~~i~d~~l~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
.............. .+.+... ........+.+++.+||+.+|++|||++|+++.|++++..
T Consensus 254 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 254 NHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp SSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 01111111111111 1111111 1223556789999999999999999999999999998843
No 112
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-34 Score=301.09 Aligned_cols=235 Identities=22% Similarity=0.268 Sum_probs=175.3
Q ss_pred HHHHHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEE
Q 004935 424 LRITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 424 ~~~t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 498 (723)
....+...+.||+|+||+||+|.. +++.||||++.... .....++..|+..+.++ +|+||++++++|.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 334445567899999999999998 47799999986542 33445666777777666 99999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 004935 499 IYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 568 (723)
||||+ +++|.+++.... ..++|.....++.+++ .+||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred EEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 99999 679988876542 3466666655554443 399999999999999999999999999875322
Q ss_pred CceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
.......||+.|+|||.+.+ .++.++|||||||+++||++|..++..... + . .+..+.. .+.+..
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~------~-~-~~~~~~~----~~~~~~ 275 (311)
T 3p1a_A 211 --GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG------W-Q-QLRQGYL----PPEFTA 275 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH------H-H-HHTTTCC----CHHHHT
T ss_pred --CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH------H-H-HHhccCC----Cccccc
Confidence 22344569999999998875 799999999999999999999776643211 1 1 1111111 111111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
. ....+.+++.+|++.+|++|||++|+++
T Consensus 276 ~----~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 276 G----LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp T----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred C----CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1 2246789999999999999999999986
No 113
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=298.34 Aligned_cols=249 Identities=22% Similarity=0.271 Sum_probs=181.7
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC-----hhhHHHHHHHHHHHHhcc---CCceeeEEEEEecCC---
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-----AQGYKQFQAEVELLMRIH---HKNLTTLVGYCDEGT--- 494 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~~~--- 494 (723)
+.+.+.||+|+||.||+|.. +++.||||++.... ......+.+|++++++++ ||||++++++|....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 34567899999999999996 56799999986422 112345677888777764 999999999997755
Q ss_pred --ceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccc
Q 004935 495 --NRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRT 562 (723)
Q Consensus 495 --~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~ 562 (723)
..++||||+. |+|.+++.......+++.....++.+++ .+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 169 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 169 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTT
T ss_pred ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccc
Confidence 4789999998 5999999876555566665555444433 39999999999999999999999999987
Q ss_pred cCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--ccc
Q 004935 563 FPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IES 640 (723)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 640 (723)
.... .......+|+.|+|||.+.+..++.++|||||||+++||++|+.||........+............ ...
T Consensus 170 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (308)
T 3g33_A 170 YSYQ----MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245 (308)
T ss_dssp STTC----CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCS
T ss_pred cCCC----cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 5422 2234567899999999999999999999999999999999999999776544333333322211100 000
Q ss_pred cc-CC--cccC--C-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 641 IV-DP--RLHE--D-----FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 641 i~-d~--~l~~--~-----~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.. .+ .+.. . ...+....+.+++.+|++.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 00 0000 0 00112346789999999999999999999875
No 114
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.7e-34 Score=305.06 Aligned_cols=246 Identities=25% Similarity=0.391 Sum_probs=187.8
Q ss_pred hhhhccccCcEEEEEEEEC-------CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLD-------GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-------~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|... +..||||++.... ......|.+|++++++++||||+++++++...+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 4678999999999999864 4589999997653 3445679999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCC--------CCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCcccc
Q 004935 502 FMANGNLQALLLGEE--------ADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF 563 (723)
Q Consensus 502 y~~~gsL~~~l~~~~--------~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~ 563 (723)
|+++|+|.+++.... ...+++...+.++. +...+||||||+||+++.++.+||+|||+++..
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence 999999999986521 12345544444433 333499999999999999999999999999865
Q ss_pred CCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCccccc
Q 004935 564 PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIV 642 (723)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 642 (723)
..... ........+++.|+|||.+.+..++.++|||||||+++||++ |+.||..... .+...... .+....
T Consensus 189 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~~~-~~~~~~-- 260 (322)
T 1p4o_A 189 YETDY-YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN----EQVLRFVM-EGGLLD-- 260 (322)
T ss_dssp GGGGC-EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH----HHHHHHHH-TTCCCC--
T ss_pred ccccc-cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH----HHHHHHHH-cCCcCC--
Confidence 32211 111223456789999999999999999999999999999999 8888875432 12222222 111111
Q ss_pred CCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhH
Q 004935 643 DPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIE 690 (723)
Q Consensus 643 d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~ 690 (723)
... .....+.+++.+|++.+|.+|||+.|+++.|++.+...
T Consensus 261 ---~~~----~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 261 ---KPD----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp ---CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ---CCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 111 12336789999999999999999999999999887533
No 115
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.7e-34 Score=295.16 Aligned_cols=237 Identities=24% Similarity=0.373 Sum_probs=184.2
Q ss_pred HHHHhhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEec-----------
Q 004935 426 ITNNFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE----------- 492 (723)
Q Consensus 426 ~t~~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----------- 492 (723)
..+...+.||+|+||.||+|... ++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 33445688999999999999984 7799999997654 356789999999999999999998854
Q ss_pred -----CCceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEec
Q 004935 493 -----GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADF 557 (723)
Q Consensus 493 -----~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~Df 557 (723)
....++||||+++|+|.+++.......+++...+.++.+++ .+||||||+|||++.++.+||+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcc
Confidence 44578999999999999999765444456555544444333 399999999999999999999999
Q ss_pred cCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC
Q 004935 558 GLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637 (723)
Q Consensus 558 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 637 (723)
|+++...... ......+++.|+|||.+.+..++.++||||||++++||++|..|+.... .... ....+.
T Consensus 167 g~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~~~-~~~~~~ 235 (284)
T 2a19_B 167 GLVTSLKNDG----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------KFFT-DLRDGI 235 (284)
T ss_dssp TTCEESSCCS----CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH------HHHH-HHHTTC
T ss_pred hhheeccccc----cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH------HHHH-Hhhccc
Confidence 9998764322 1234568999999999999999999999999999999999998875321 1111 111211
Q ss_pred cccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhh
Q 004935 638 IESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAI 689 (723)
Q Consensus 638 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~ 689 (723)
+ ....+ ..+.+++.+|++.+|.+|||+.|+++.|+.+...
T Consensus 236 ~--------~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 236 I--------SDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp C--------CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred c--------cccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1 11122 2467899999999999999999999999877643
No 116
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5e-34 Score=306.41 Aligned_cols=251 Identities=20% Similarity=0.196 Sum_probs=178.2
Q ss_pred hhhhccccCcEEEEEEEEC-----CceEEEEEecCCChh-----------hHHHHHHHHHHHHhccCCceeeEEEEEec-
Q 004935 430 FERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPSSAQ-----------GYKQFQAEVELLMRIHHKNLTTLVGYCDE- 492 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~~~~-----------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~- 492 (723)
+.+.||+|+||.||+|... +..||||+....... ..+.+.+|+..++.++||||+++++++..
T Consensus 41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence 4578999999999999984 358999998765421 11346788899999999999999999987
Q ss_pred ---CCceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCC--cEEEEec
Q 004935 493 ---GTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKF--QAKIADF 557 (723)
Q Consensus 493 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~--~~kl~Df 557 (723)
....++||||+ +++|.+++.... .+++...+.++.+++ .+||||||+|||++.++ .+||+||
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Df 197 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADY 197 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCC
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeC
Confidence 77899999999 999999987643 456655555544443 39999999999999887 9999999
Q ss_pred cCccccCCCCCC----ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHh
Q 004935 558 GLSRTFPVEGSG----THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFML 633 (723)
Q Consensus 558 Gla~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~ 633 (723)
|+++.+...... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||.................
T Consensus 198 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 277 (345)
T 2v62_A 198 GLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNL 277 (345)
T ss_dssp TTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHH
T ss_pred CCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhh
Confidence 999876432211 1112345799999999999999999999999999999999999999965332222222222111
Q ss_pred cCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 004935 634 GKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687 (723)
Q Consensus 634 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~ 687 (723)
... +...+...... ......+.+++.+||+.+|++||++++|++.|++..
T Consensus 278 ~~~-~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 278 LDE-LPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHT-TTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred ccc-ccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111 11100000000 012236789999999999999999999999998653
No 117
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-33 Score=302.98 Aligned_cols=230 Identities=24% Similarity=0.350 Sum_probs=176.6
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
..+.||+|+||.||+|.. +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||++
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC
Confidence 356899999999999997 56799999997543 2344679999999999999999999999999999999999998
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
|+|.+++.... ..+++.....++. +...+||||||+|||++.++.+||+|||+++.... ..
T Consensus 138 -g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-------~~ 208 (348)
T 1u5q_A 138 -GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------AN 208 (348)
T ss_dssp -EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------BC
T ss_pred -CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-------CC
Confidence 68888775322 2345554444443 33349999999999999999999999999987532 12
Q ss_pred cccCCCccccccccc---cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 575 TIAGTPGYLDPEYYI---SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~---~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
...||+.|+|||.+. ...++.++|||||||+++||++|+.||....... .......... +.+...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~----~~~~~~~~~~------~~~~~~-- 276 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----ALYHIAQNES------PALQSG-- 276 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSCC------CCCCCT--
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcCC------CCCCCC--
Confidence 356899999999985 5678999999999999999999999997654321 1222211111 111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+||+.+|++|||++++++
T Consensus 277 -~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 277 -HWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11235679999999999999999999986
No 118
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-33 Score=294.84 Aligned_cols=247 Identities=20% Similarity=0.290 Sum_probs=177.9
Q ss_pred hhhhccccCcEEEEEEEEC-CceEEEEEecCCChh--hHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQ--GYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-~~~vavK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|... ++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 4578999999999999984 679999999755432 246788999999999999999999999999999999999986
Q ss_pred CHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++..... .+++... +..+|+...+||||||+|||++.++.+||+|||+++...... ......
T Consensus 85 ~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~ 160 (288)
T 1ob3_A 85 DLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHE 160 (288)
T ss_dssp EHHHHHHTSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------
T ss_pred CHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc---cccccc
Confidence 99988875422 2343333 333444444999999999999999999999999998653221 122345
Q ss_pred cCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--ccc-----ccCCccc-
Q 004935 577 AGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IES-----IVDPRLH- 647 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-----i~d~~l~- 647 (723)
.+|+.|+|||.+.+. .++.++|||||||+++||++|+.||........+....+....... ... ..++.+.
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T 1ob3_A 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (288)
T ss_dssp -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence 689999999998764 5899999999999999999999999766543333333322111100 000 0111110
Q ss_pred ------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 648 ------EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 648 ------~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..........+.+++.+|++.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0001112346779999999999999999999875
No 119
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7e-34 Score=303.38 Aligned_cols=245 Identities=24% Similarity=0.290 Sum_probs=169.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhcc-CCceeeEEEEEe--------cCCceEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVGYCD--------EGTNRGL 498 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~--------~~~~~~l 498 (723)
+.+.||+|+||.||+|.. +++.||||++........+.+.+|+.+++++. ||||+++++++. .....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 467899999999999998 67799999997777777788999999999996 999999999994 3345789
Q ss_pred EEEeCCCCCHHHHhccC-CCCCCCHHHH----------HHHHHhcc--ccccCCCCCCEEEcCCCcEEEEeccCccccCC
Q 004935 499 IYEFMANGNLQALLLGE-EADILSWEGR----------LRIAIEAA--KVHRDVKSTNILLSGKFQAKIADFGLSRTFPV 565 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~-~~~~l~~~~~----------l~i~~~~a--~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 565 (723)
|+||+. |+|.+++... ....+++... +..+|... .+||||||+|||++.++.+||+|||+++....
T Consensus 112 v~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 190 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190 (337)
T ss_dssp EEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSS
T ss_pred EEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccc
Confidence 999996 7999888652 2223555444 44445555 69999999999999999999999999987643
Q ss_pred CCCCc---------eeeecccCCCcccccccc---ccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHh
Q 004935 566 EGSGT---------HVTTTIAGTPGYLDPEYY---ISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFML 633 (723)
Q Consensus 566 ~~~~~---------~~~~~~~gt~~y~aPE~~---~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~ 633 (723)
..... .......+|+.|+|||.+ .+..++.++|||||||+++||++|+.||...... ......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~- 265 (337)
T 3ll6_A 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----RIVNGK- 265 (337)
T ss_dssp CC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred cCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----HhhcCc-
Confidence 32111 011234589999999998 5667899999999999999999999999653221 111100
Q ss_pred cCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 634 GKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 634 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
.. ...... ....+.+++.+||+.+|.+|||++|+++.|+++.+....
T Consensus 266 ----~~----~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 266 ----YS----IPPHDT----QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ----CC----CCTTCC----SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred ----cc----CCcccc----cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 00 000011 112367899999999999999999999999998865543
No 120
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7.7e-34 Score=302.47 Aligned_cols=246 Identities=28% Similarity=0.427 Sum_probs=185.8
Q ss_pred HhhhhccccCcEEEEEEEE--CCc--eEEEEEecCCC-hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEe
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGT--EVAVKMLSPSS-AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~--~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.+.||+|+||.||+|.. ++. .||+|.+.... ....+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~ 107 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 107 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEec
Confidence 3467899999999999987 454 45999987543 33456799999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhccCC--------------CCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEecc
Q 004935 503 MANGNLQALLLGEE--------------ADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFG 558 (723)
Q Consensus 503 ~~~gsL~~~l~~~~--------------~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfG 558 (723)
+++|+|.+++.... ...+++...+.++.+++ .+||||||+|||++.++.+||+|||
T Consensus 108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg 187 (327)
T 1fvr_A 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG 187 (327)
T ss_dssp CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTT
T ss_pred CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccC
Confidence 99999999997643 23456555555444433 3999999999999999999999999
Q ss_pred CccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCC
Q 004935 559 LSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGD 637 (723)
Q Consensus 559 la~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 637 (723)
+++..... .......+++.|+|||.+.+..++.++|||||||+++||+| |+.||..... .+..... ..+.
T Consensus 188 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~----~~~~~~~-~~~~ 258 (327)
T 1fvr_A 188 LSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC----AELYEKL-PQGY 258 (327)
T ss_dssp CEESSCEE----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHG-GGTC
T ss_pred cCcccccc----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH----HHHHHHh-hcCC
Confidence 99753211 11233456889999999998889999999999999999998 9999975532 2222222 1111
Q ss_pred cccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 638 IESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 638 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
...... .....+.+++.+|++.+|.+|||++|+++.|+++++....
T Consensus 259 -----~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 259 -----RLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp -----CCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred -----CCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 011111 1224678999999999999999999999999998865544
No 121
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.3e-33 Score=293.69 Aligned_cols=247 Identities=19% Similarity=0.234 Sum_probs=177.1
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 457899999999999998 46689999997543 33456789999999999999999999999999999999999986
Q ss_pred CCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
++.+.+.... ..+++... +..+|+...+||||||+|||++.++.+||+|||+++..... ......
T Consensus 86 -~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~ 160 (292)
T 3o0g_A 86 -DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---VRCYSA 160 (292)
T ss_dssp -EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC---CSCCCS
T ss_pred -CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc---cccccC
Confidence 5555544322 22343333 33334444499999999999999999999999999876422 122344
Q ss_pred ccCCCccccccccccCC-CCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcc------cccCCc---
Q 004935 576 IAGTPGYLDPEYYISNR-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE------SIVDPR--- 645 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~-~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~i~d~~--- 645 (723)
..+|+.|+|||.+.+.. ++.++|||||||+++||++|+.|+............+.......... ...+..
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (292)
T 3o0g_A 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240 (292)
T ss_dssp CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCC
T ss_pred CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccc
Confidence 57899999999998766 89999999999999999999888644333222222222222111100 000000
Q ss_pred ------ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 646 ------LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 646 ------l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
............+.+++.+|++.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000011122346779999999999999999999876
No 122
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.7e-34 Score=303.80 Aligned_cols=243 Identities=22% Similarity=0.294 Sum_probs=177.0
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCC-----ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEE
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS-----SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
+.+.+.||+|+||.||+|.. ++..||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 107 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM 107 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence 33468999999999999998 4568999998643 2344578999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhccCC--------------------------------------CCCC----------CHHHHHHHHHhc
Q 004935 501 EFMANGNLQALLLGEE--------------------------------------ADIL----------SWEGRLRIAIEA 532 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~--------------------------------------~~~l----------~~~~~l~i~~~~ 532 (723)
||+++|+|.+++.... ...+ +....+..+++.
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 187 (345)
T 3hko_A 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187 (345)
T ss_dssp ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999985210 0001 122233444444
Q ss_pred cccccCCCCCCEEEcCCC--cEEEEeccCccccCCCCCC-ceeeecccCCCcccccccccc--CCCCChhhHHHHHHHHH
Q 004935 533 AKVHRDVKSTNILLSGKF--QAKIADFGLSRTFPVEGSG-THVTTTIAGTPGYLDPEYYIS--NRLTEKSDVYNFGVVLL 607 (723)
Q Consensus 533 a~vH~Dlk~~NILl~~~~--~~kl~DfGla~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~SfGvvL~ 607 (723)
..+||||||+|||++.++ .+||+|||+++.+...... ........||+.|+|||.+.+ ..++.++|||||||+++
T Consensus 188 ~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~ 267 (345)
T 3hko_A 188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267 (345)
T ss_dssp TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHH
T ss_pred CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHH
Confidence 449999999999998776 8999999999865432211 112345679999999999875 67899999999999999
Q ss_pred HHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 608 EIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 608 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
||++|+.||..........+ ...... ....+.. ......+.+++.+|++.+|.+||++.|+++
T Consensus 268 el~~g~~pf~~~~~~~~~~~----~~~~~~--~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 268 LLLMGAVPFPGVNDADTISQ----VLNKKL--CFENPNY-----NVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHSSCSSCCSSHHHHHHH----HHHCCC--CTTSGGG-----GGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHCCCCCCCCChHHHHHH----HHhccc--ccCCccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999999976543322222 221110 0001111 112236789999999999999999999986
No 123
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-33 Score=295.68 Aligned_cols=246 Identities=21% Similarity=0.253 Sum_probs=177.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|+||++
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 457899999999999998 46799999987543 2334779999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+++...+.++. +...+||||||+|||++.++.+||+|||++....... .....
T Consensus 118 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 193 (309)
T 2h34_A 118 GVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK--LTQLG 193 (309)
T ss_dssp CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC---------------
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc--ccccc
Confidence 999999987532 244444444433 3334999999999999999999999999998654321 12223
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC-cccccCCcccCCCCHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD-IESIVDPRLHEDFDIN 653 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~i~d~~l~~~~~~~ 653 (723)
...+++.|+|||.+.+..++.++||||||++++||++|+.||...... .+........ .... ....
T Consensus 194 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~----~~~~---- 260 (309)
T 2h34_A 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-----VMGAHINQAIPRPST----VRPG---- 260 (309)
T ss_dssp ---CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-----HHHHHHHSCCCCGGG----TSTT----
T ss_pred ccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-----HHHHHhccCCCCccc----cCCC----
Confidence 456899999999999999999999999999999999999999764321 1122221111 1111 1111
Q ss_pred HHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHhhhhHhh
Q 004935 654 SVWKTVEIAMACVSQTSTKRP-TMNQVVMELNESLAIETA 692 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RP-sm~evl~~L~~~~~~~~~ 692 (723)
....+.+++.+|++.+|++|| +++++++.|+++++....
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 122577999999999999999 999999999988755543
No 124
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.7e-34 Score=305.94 Aligned_cols=227 Identities=24% Similarity=0.315 Sum_probs=172.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|+. +++.||||+++... ....+.+.+|.++++++ +||||+++++++...+..++||||+
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 106 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence 457899999999999998 46799999997542 23346688999999998 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHH----------HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWE----------GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~----------~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... .++.. ..+..+|+...+||||||+|||++.++.+||+|||+++..... ....
T Consensus 107 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~---~~~~ 181 (353)
T 3txo_A 107 NGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN---GVTT 181 (353)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC---Cccc
Confidence 9999999987542 13332 2344444444599999999999999999999999999864322 2233
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ........ .. .+....
T Consensus 182 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~i~~~-~~------~~p~~~--- 247 (353)
T 3txo_A 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----LFEAILND-EV------VYPTWL--- 247 (353)
T ss_dssp ----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHC-CC------CCCTTS---
T ss_pred cccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----HHHHHHcC-CC------CCCCCC---
Confidence 45679999999999999899999999999999999999999997654322 12222111 11 111111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTM 676 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm 676 (723)
...+.+++.+|++.+|.+||++
T Consensus 248 -~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 248 -HEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -CHHHHHHHHHHTCSSGGGSTTS
T ss_pred -CHHHHHHHHHHhhhCHHHccCC
Confidence 2357799999999999999998
No 125
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.9e-33 Score=297.32 Aligned_cols=244 Identities=26% Similarity=0.404 Sum_probs=176.0
Q ss_pred hhhhccccCcEEEEEEEEC-----CceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCc-----eE
Q 004935 430 FERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTN-----RG 497 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~-----~~ 497 (723)
+.+.||+|+||.||+|... +..||||++... .....+.+.+|++++++++||||+++++++..... .+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 3578999999999999873 237999998754 34455779999999999999999999999977653 48
Q ss_pred EEEEeCCCCCHHHHhccC----CCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCcccc
Q 004935 498 LIYEFMANGNLQALLLGE----EADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTF 563 (723)
Q Consensus 498 lV~Ey~~~gsL~~~l~~~----~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~ 563 (723)
+||||+++|+|.+++... ....+++...+.++.+++ .+||||||+|||++.++.+||+|||+++..
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~ 197 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceec
Confidence 999999999999998532 234466665555544443 399999999999999999999999999875
Q ss_pred CCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCccccc
Q 004935 564 PVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIV 642 (723)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 642 (723)
..... ........+++.|+|||.+.+..++.++||||||++++||++ |+.||....... .... .... ..
T Consensus 198 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~---~~~~-~~---- 267 (313)
T 3brb_A 198 YSGDY-YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-MYDY---LLHG-HR---- 267 (313)
T ss_dssp --------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHHH---HHTT-CC----
T ss_pred ccccc-cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHH---HHcC-CC----
Confidence 43221 122234457889999999999999999999999999999999 888887654322 2211 1111 10
Q ss_pred CCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 643 DPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 643 d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
+.... .....+.+++.+|++.+|.+|||+.++++.|+++++
T Consensus 268 -~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 268 -LKQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp -CCCBT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCc----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111 122367899999999999999999999999998875
No 126
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.7e-33 Score=304.00 Aligned_cols=237 Identities=22% Similarity=0.301 Sum_probs=172.7
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.+.||+|+||.||++.. +++.||||++...... .+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 23 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 101 (361)
T 3uc3_A 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG 101 (361)
T ss_dssp EEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCC
Confidence 3467899999999999998 4679999999764432 356889999999999999999999999999999999999999
Q ss_pred CHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCc--EEEEeccCccccCCCCCCceeee
Q 004935 507 NLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQ--AKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~--~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|.+++.... .+++.. .+..+|+...+||||||+|||++.++. +||+|||+++..... ....
T Consensus 102 ~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~----~~~~ 175 (361)
T 3uc3_A 102 ELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH----SQPK 175 (361)
T ss_dssp BHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------------
T ss_pred CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc----CCCC
Confidence 9999986532 133332 334444444599999999999987765 999999999753221 1223
Q ss_pred cccCCCccccccccccCCCCCh-hhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEK-SDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~-~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
...||+.|+|||.+.+..++.+ +|||||||+++||++|+.||............+........ .+... ..
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-------SIPDD--IR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC-------CCCTT--SC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-------CCCCc--CC
Confidence 4569999999999988887765 89999999999999999999876554455444443332211 00000 01
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+||+.+|++|||++|+++
T Consensus 247 ~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 247 ISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 1235779999999999999999999986
No 127
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.9e-33 Score=303.54 Aligned_cols=244 Identities=22% Similarity=0.259 Sum_probs=181.3
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhcc-----CCceeeEEEEEecCCceEEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-----HKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-----H~nIv~l~g~~~~~~~~~lV~E 501 (723)
.+.+.||+|+||.||+|.. +++.||||++... ....+.+..|++++++++ ||||+++++++...+..++|||
T Consensus 38 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e 116 (360)
T 3llt_A 38 LVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE 116 (360)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEEC
T ss_pred EEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEc
Confidence 3458899999999999998 5679999999743 344567888999999996 9999999999999999999999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcC-----------------------
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSG----------------------- 548 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~----------------------- 548 (723)
|+ +++|.+++.......+++.....++. +...+||||||+|||++.
T Consensus 117 ~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (360)
T 3llt_A 117 PL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYR 195 (360)
T ss_dssp CC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEE
T ss_pred CC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccc
Confidence 99 99999999876544455554444433 333399999999999975
Q ss_pred --CCcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHH
Q 004935 549 --KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHIT 626 (723)
Q Consensus 549 --~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~ 626 (723)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||+++||++|+.||........+.
T Consensus 196 ~~~~~~kl~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 269 (360)
T 3llt_A 196 TKSTGIKLIDFGCATFKSDY------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLA 269 (360)
T ss_dssp ESCCCEEECCCTTCEETTSC------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCCCCEEEEeccCceecCCC------CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHH
Confidence 789999999999864321 234578999999999999999999999999999999999999997654332222
Q ss_pred HHHHHHhcCCC-----------cccccC-Ccc----cCCC-CHH---------------HHHHHHHHHHhccCCCCCCCC
Q 004935 627 QWVSFMLGKGD-----------IESIVD-PRL----HEDF-DIN---------------SVWKTVEIAMACVSQTSTKRP 674 (723)
Q Consensus 627 ~~~~~~~~~~~-----------~~~i~d-~~l----~~~~-~~~---------------~~~~l~~l~~~Cl~~~p~~RP 674 (723)
. +........ ....++ ..+ .... ... ....+.+++.+||+.||++||
T Consensus 270 ~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 348 (360)
T 3llt_A 270 M-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRP 348 (360)
T ss_dssp H-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSC
T ss_pred H-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCC
Confidence 1 111111100 000000 000 0000 000 114567999999999999999
Q ss_pred CHHHHHH
Q 004935 675 TMNQVVM 681 (723)
Q Consensus 675 sm~evl~ 681 (723)
|++|+++
T Consensus 349 ta~elL~ 355 (360)
T 3llt_A 349 SPAELLK 355 (360)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999875
No 128
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-33 Score=300.26 Aligned_cols=235 Identities=22% Similarity=0.298 Sum_probs=159.7
Q ss_pred hhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhcc-CCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 432 RVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.||+|+||.||+|... ++.||||++... ....+.+|+++++++. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67999999999999984 679999999643 3467889999999997 99999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCC---cEEEEeccCccccCCCCCCceeeec
Q 004935 509 QALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKF---QAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~---~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
.+++.... .+++..... .+|+...+||||||+|||++.++ .+||+|||+++...... .....
T Consensus 94 ~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~ 168 (325)
T 3kn6_A 94 FERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---QPLKT 168 (325)
T ss_dssp HHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC---Ccccc
Confidence 99997642 344444333 33333449999999999998765 89999999998654322 22334
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc---ccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER---IHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
..+|+.|+|||.+.+..++.++|||||||+++||++|+.||...... ....+... .+..+... +......
T Consensus 169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~i~~~~~~------~~~~~~~ 241 (325)
T 3kn6_A 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK-KIKKGDFS------FEGEAWK 241 (325)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH-HHTTTCCC------CCSHHHH
T ss_pred cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH-HHHcCCCC------CCccccc
Confidence 56899999999999999999999999999999999999999754321 11222222 22222110 0000001
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+|++.+|.+|||++|+++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 12346789999999999999999999874
No 129
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.7e-33 Score=306.65 Aligned_cols=232 Identities=21% Similarity=0.298 Sum_probs=169.2
Q ss_pred hhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEec----CCceEEEEEeCC
Q 004935 432 RVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDE----GTNRGLIYEFMA 504 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~----~~~~~lV~Ey~~ 504 (723)
+.||+|+||.||++.. +++.||||++... ..+.+|++++.++ +||||+++++++.. ....++|||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 5799999999999998 4668999999632 4577889887554 89999999998865 567899999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcC---CCcEEEEeccCccccCCCCCCce
Q 004935 505 NGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSG---KFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~---~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
+|+|.+++.......+++.....++.+ ...+||||||+|||++. ++.+||+|||+++..... .
T Consensus 143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~----~ 218 (400)
T 1nxk_A 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH----N 218 (400)
T ss_dssp SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------
T ss_pred CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC----C
Confidence 999999998765445665555444433 33399999999999997 789999999999865322 1
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccc---cHHHHHHHHhcCCCcccccCCcccC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERI---HITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .....+. .+... .-.+.. .
T Consensus 219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~~-~~~~~~-~ 292 (400)
T 1nxk_A 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQYE-FPNPEW-S 292 (400)
T ss_dssp --------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCCC-CCTTTT-T
T ss_pred ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCccc-CCCccc-c
Confidence 2335678999999999999999999999999999999999999997553321 1112111 11110 000110 1
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
.....+.+++.+||+.+|++|||+.|+++.
T Consensus 293 ----~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 293 ----EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 122357899999999999999999999873
No 130
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.4e-33 Score=298.75 Aligned_cols=250 Identities=24% Similarity=0.300 Sum_probs=185.8
Q ss_pred ccCHHHHHHHHHHhh-hhccccCcEEEEEEEEC--CceEEEEEecCCC--hhhHHHHHHHHHHHHhc-cCCceeeEEEEE
Q 004935 417 RFSYSNVLRITNNFE-RVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS--AQGYKQFQAEVELLMRI-HHKNLTTLVGYC 490 (723)
Q Consensus 417 ~~~~~~l~~~t~~f~-~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~ 490 (723)
.|...+.....+.+. +.||+|+||.||+|... ++.||||++.... ......+.+|+.+++++ +||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 344444444444444 78999999999999984 7799999987542 23457899999999999 569999999999
Q ss_pred ecCCceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcC---CCcEEEEec
Q 004935 491 DEGTNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSG---KFQAKIADF 557 (723)
Q Consensus 491 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~---~~~~kl~Df 557 (723)
...+..++||||+++|+|.+++.......+++.....++.+++ .+||||||+|||++. ++.+||+||
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999999998765555566655555544443 399999999999998 789999999
Q ss_pred cCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC
Q 004935 558 GLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD 637 (723)
Q Consensus 558 Gla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 637 (723)
|+++...... ......||+.|+|||.+.+..++.++|||||||+++||++|+.||.............. ....
T Consensus 179 g~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~ 251 (327)
T 3lm5_A 179 GMSRKIGHAC----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ---VNVD 251 (327)
T ss_dssp GGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCC
T ss_pred ccccccCCcc----ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh---cccc
Confidence 9998764221 22345799999999999999999999999999999999999999976543222111111 1111
Q ss_pred cccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 638 IESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 638 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
. ...........+.+++.+|++.+|.+|||++|+++
T Consensus 252 ~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 252 Y--------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp C--------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c--------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 01111112335779999999999999999999876
No 131
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-33 Score=300.93 Aligned_cols=249 Identities=25% Similarity=0.380 Sum_probs=186.5
Q ss_pred HhhhhccccCcEEEEEEEE-------CCceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL-------DGTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~-------~~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
.+.+.||+|+||.||+|.. ++..||||++... ......++.+|+.++++++||||+++++++......++||
T Consensus 33 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (327)
T 2yfx_A 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILM 112 (327)
T ss_dssp EEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEE
Confidence 3467899999999999984 3458999999754 3455678999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhccCCC-----CCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcC---CCcEEEEeccCccc
Q 004935 501 EFMANGNLQALLLGEEA-----DILSWEGRLRIAIEAA----------KVHRDVKSTNILLSG---KFQAKIADFGLSRT 562 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~-----~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~---~~~~kl~DfGla~~ 562 (723)
||+++|+|.+++..... ..+++...+.++.+++ .+||||||+|||++. +..+||+|||+++.
T Consensus 113 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 113 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp ECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred ecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 99999999999976532 3456655555444433 399999999999994 45699999999976
Q ss_pred cCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccc
Q 004935 563 FPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 641 (723)
...... ........+++.|+|||.+.+..++.++|||||||+++||+| |+.||...... +...... .+..
T Consensus 193 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~-~~~~--- 263 (327)
T 2yfx_A 193 IYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEFVT-SGGR--- 263 (327)
T ss_dssp HHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHH-TTCC---
T ss_pred cccccc-cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHHHh-cCCC---
Confidence 432211 122234567889999999999999999999999999999998 99998754321 2222221 1111
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
+.... .....+.+++.+||+.+|.+||++.++++.|+.+.+....
T Consensus 264 --~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~ 308 (327)
T 2yfx_A 264 --MDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308 (327)
T ss_dssp --CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred --CCCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence 11111 1223678999999999999999999999999988765543
No 132
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-33 Score=305.08 Aligned_cols=232 Identities=19% Similarity=0.303 Sum_probs=174.9
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|+.. ++.||+|+++... ....+.+..|..++.++ +||||+++++++...+..++||||+
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 3578999999999999984 5689999997542 22334588999999887 8999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... .+++.. .+..+|+...+||||||+|||++.++.+||+|||+++..... ....
T Consensus 136 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~---~~~~ 210 (396)
T 4dc2_A 136 NGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTT 210 (396)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT---TCCB
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC---CCcc
Confidence 9999999987532 233333 333444444599999999999999999999999999863222 2234
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc----ccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER----IHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
....||+.|+|||.+.+..++.++|||||||+++||++|+.||...... ......+...+..... .+...
T Consensus 211 ~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p~~ 284 (396)
T 4dc2_A 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RIPRS 284 (396)
T ss_dssp CCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------CCCTT
T ss_pred ccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------CCCCc
Confidence 4567999999999999999999999999999999999999999643211 1111222222222111 11111
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTM 676 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm 676 (723)
. ...+.+++.+||+.+|.+||++
T Consensus 285 ~----s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 L----SVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp S----CHHHHHHHHHHTCSCTTTSTTC
T ss_pred C----CHHHHHHHHHHhcCCHhHcCCC
Confidence 2 2357799999999999999996
No 133
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=301.79 Aligned_cols=236 Identities=18% Similarity=0.306 Sum_probs=172.6
Q ss_pred hhhhccccCcEEEEEEEE-CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccC--CceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL-DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHH--KNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H--~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||++.. +++.||||++... .....+.+.+|+++|++++| +||+++++++......++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 457899999999999988 4568999998754 34455789999999999976 999999999999999999999 56
Q ss_pred CCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++... +..+|+...+||||||+|||++ ++.+||+|||+++....... .....
T Consensus 92 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-~~~~~ 167 (343)
T 3dbq_A 92 NIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-SVVKD 167 (343)
T ss_dssp SEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----------
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc-cccCC
Confidence 889999997643 2344333 3334444449999999999997 57899999999987643321 22234
Q ss_pred cccCCCcccccccccc-----------CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccC
Q 004935 575 TIAGTPGYLDPEYYIS-----------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~-----------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d 643 (723)
...||+.|+|||.+.+ ..++.++|||||||+++||++|+.||...... ..........
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~-------- 236 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDP-------- 236 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHHHCT--------
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HHHHHHHhcC--------
Confidence 5679999999999865 67899999999999999999999999754321 1112222211
Q ss_pred CcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 644 PRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 644 ~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
......+......+.+++.+||+.+|.+|||+.|+++.
T Consensus 237 -~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 237 -NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp -TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111111112357799999999999999999999863
No 134
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-33 Score=297.67 Aligned_cols=229 Identities=23% Similarity=0.330 Sum_probs=178.8
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+++. +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 357899999999999998 46799999987532 1234678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .++... .+..+|+...+||||||+|||++.++.+||+|||+++.... ...
T Consensus 90 gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTY 161 (318)
T ss_dssp SCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------CBC
T ss_pred CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC------ccc
Confidence 999999997642 233332 23334444449999999999999999999999999987532 123
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +........ . ..+....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~i~~~-~------~~~p~~~---- 226 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM----KTYEKILNA-E------LRFPPFF---- 226 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHHC-C------CCCCTTS----
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHHhC-C------CCCCCCC----
Confidence 457999999999999999999999999999999999999999765332 112222211 1 1111112
Q ss_pred HHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRP-----TMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RP-----sm~evl~ 681 (723)
...+.+++.+|++.+|++|| +++|+++
T Consensus 227 ~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 23577999999999999999 7888774
No 135
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.4e-33 Score=306.13 Aligned_cols=235 Identities=17% Similarity=0.300 Sum_probs=173.5
Q ss_pred hhhhccccCcEEEEEEEEC-CceEEEEEecCC--ChhhHHHHHHHHHHHHhcc--CCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD-GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIH--HKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||++... ++.||||++... .....+.+.+|+++|++++ |+||+++++++...+..++||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 4578999999999999884 668999998654 3445678999999999996 5999999999999999999999 67
Q ss_pred CCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+.+..+. ..+|+...+||||||+|||++ ++.+||+|||+++.+..... .....
T Consensus 139 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-~~~~~ 214 (390)
T 2zmd_A 139 NIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-SVVKD 214 (390)
T ss_dssp SEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----------C
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-cccCC
Confidence 889999997653 34443333 333444449999999999996 57899999999987643221 12234
Q ss_pred cccCCCcccccccccc-----------CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccC
Q 004935 575 TIAGTPGYLDPEYYIS-----------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~-----------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d 643 (723)
...||+.|+|||.+.+ ..++.++|||||||+||||++|+.||...... ...........
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~~~~~~~------- 284 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPN------- 284 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHCTT-------
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---HHHHHHHhCcc-------
Confidence 5679999999999865 46899999999999999999999999754321 12222222211
Q ss_pred CcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 PRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+......+.+++.+||+.+|.+|||++|+++
T Consensus 285 --~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 285 --HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp --SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 111111111235779999999999999999999986
No 136
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-33 Score=301.21 Aligned_cols=230 Identities=20% Similarity=0.288 Sum_probs=175.7
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++..... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 467899999999999998 567999999864321 12357899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++.... ..+|+...+||||||+|||+++++.+||+|||+++..... ....
T Consensus 92 ~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~----~~~~ 165 (336)
T 3h4j_B 92 GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----NFLK 165 (336)
T ss_dssp CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS----BTTC
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC----cccc
Confidence 689988886532 23443333 3333334499999999999999999999999999875422 1223
Q ss_pred cccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 575 TIAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
...||+.|+|||.+.+..+ +.++|||||||+++||++|+.||........ ...+..... ..+..
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~~~~--~~p~~ 230 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKKVNSCVY--VMPDF 230 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCCCCSSCC--CCCTT
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHHHHcCCC--CCccc
Confidence 4579999999999988776 7899999999999999999999975432110 001100000 01111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+|++.||.+|||++|+++
T Consensus 231 ~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 231 LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 2235779999999999999999999986
No 137
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=304.45 Aligned_cols=234 Identities=20% Similarity=0.273 Sum_probs=178.3
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||++... ++.||+|++.... ....+.+.+|+++|++++||||+++++++.+.+..++||||++
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 4578999999999999984 5689999986432 2234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++.. .+..+|+...+||||||+|||++.++.+||+|||+++..... ....
T Consensus 99 gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~----~~~~ 172 (384)
T 4fr4_A 99 GGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQIT 172 (384)
T ss_dssp TEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT----CCBC
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC----Ccee
Confidence 999999997642 233333 333444444499999999999999999999999999876432 2234
Q ss_pred cccCCCcccccccccc---CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 575 TIAGTPGYLDPEYYIS---NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~---~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
...||+.|+|||.+.. ..++.++|||||||++|||++|+.||...... ............ . ......
T Consensus 173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-~~~~~~~~~~~~-~------~~~p~~-- 242 (384)
T 4fr4_A 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-SSKEIVHTFETT-V------VTYPSA-- 242 (384)
T ss_dssp CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-CHHHHHHHHHHC-C------CCCCTT--
T ss_pred ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-cHHHHHHHHhhc-c------cCCCCc--
Confidence 5679999999999864 45899999999999999999999999754332 222222222111 0 111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPT-MNQVVM 681 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPs-m~evl~ 681 (723)
....+.+++.+||+.+|.+||+ ++++.+
T Consensus 243 --~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 --WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1236789999999999999998 555543
No 138
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.5e-33 Score=297.70 Aligned_cols=238 Identities=23% Similarity=0.304 Sum_probs=182.5
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCChh------hHHHHHHHHHHHHhccCCceeeEEEEEecCCceEE
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ------GYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~l 498 (723)
.+.+.+.||+|+||.||+|.. ++..||||++...... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 345578999999999999998 4679999998754321 35789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCC----cEEEEeccCccccC
Q 004935 499 IYEFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFP 564 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~----~~kl~DfGla~~~~ 564 (723)
||||+++++|.+++.... .+++... +..+|+...+||||||+|||++.++ .+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 999999999999997542 2333333 3333444449999999999999887 79999999998764
Q ss_pred CCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCC
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 644 (723)
... ......||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +...... .... ..++
T Consensus 171 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~i~-~~~~--~~~~ 239 (321)
T 2a2a_A 171 DGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLANIT-SVSY--DFDE 239 (321)
T ss_dssp TTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHH-TTCC--CCCH
T ss_pred ccc----cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHH-hccc--ccCh
Confidence 321 123456899999999999999999999999999999999999999765332 1111111 1100 0111
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+... ....+.+++.+|++.+|++|||++|+++
T Consensus 240 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 240 EFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111 1235789999999999999999999986
No 139
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.8e-33 Score=291.98 Aligned_cols=236 Identities=19% Similarity=0.286 Sum_probs=179.9
Q ss_pred HHhhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 428 NNFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.+.||+|+||.||+|... +..||+|++........+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG 90 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCC
Confidence 344678999999999999985 448999999765555567899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCCCcee
Q 004935 506 GNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
++|.+++.... .+++..... .+|+...+||||||+|||+ +.++.+||+|||++....... .
T Consensus 91 ~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----~ 164 (277)
T 3f3z_A 91 GELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----M 164 (277)
T ss_dssp CBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----C
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----c
Confidence 99999886532 234443333 3333344999999999999 788999999999998754322 2
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
.....+|+.|+|||.+.+. ++.++||||||++++||++|+.||......... .... .+.... ......
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~-~~~~~~--~~~~~~---- 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM----LKIR-EGTFTF--PEKDWL---- 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHH-HCCCCC--CHHHHT----
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH----HHHH-hCCCCC--Cchhhh----
Confidence 2345689999999988654 999999999999999999999999765432211 1111 111000 000000
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+|++.+|.+|||+.++++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11236789999999999999999999986
No 140
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.2e-33 Score=297.77 Aligned_cols=235 Identities=23% Similarity=0.332 Sum_probs=169.6
Q ss_pred HhhhhccccCcEEEEEEEE-----CCceEEEEEecCCC----hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL-----DGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV 499 (723)
.+.+.||+|+||.||+++. +++.||+|+++... ......+.+|+++|++++||||+++++++...+..++|
T Consensus 20 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 99 (327)
T 3a62_A 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLI 99 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred EEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEE
Confidence 3457899999999999987 46699999997653 23345688999999999999999999999999999999
Q ss_pred EEeCCCCCHHHHhccCCC----CCC----CHHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 500 YEFMANGNLQALLLGEEA----DIL----SWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~----~~l----~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|||+++|+|.+++..... ... +....+..+|+...+||||||+|||++.++.+||+|||+++..... ..
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~~ 176 (327)
T 3a62_A 100 LEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---GT 176 (327)
T ss_dssp EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----------
T ss_pred EeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccC---Cc
Confidence 999999999999875321 111 2223344444444599999999999999999999999999764322 12
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ........ . ..+....
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~-~------~~~p~~~- 244 (327)
T 3a62_A 177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----TIDKILKC-K------LNLPPYL- 244 (327)
T ss_dssp --CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHT-C------CCCCTTS-
T ss_pred cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhC-C------CCCCCCC-
Confidence 2345679999999999999999999999999999999999999997654322 12211111 1 1111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 004935 652 INSVWKTVEIAMACVSQTSTKRP-----TMNQVVM 681 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RP-----sm~evl~ 681 (723)
...+.+++.+|++.+|++|| +++|+++
T Consensus 245 ---~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 245 ---TQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 23577999999999999999 5566654
No 141
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2e-33 Score=310.14 Aligned_cols=238 Identities=23% Similarity=0.299 Sum_probs=178.1
Q ss_pred hhhccccCcEEEEEEEEC--CceEEEEEecCCChh---hHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 431 ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQ---GYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~---~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.||+|+||.||+|+.. ++.||+|++...... ....+.+|+.++.+++||||++++++|.+.+..++|||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 478999999999999984 568999998653211 123488999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
|+|.+++.... ..+++... +..+|+...|||||||+|||++.++.+||+|||+++...... ......
T Consensus 159 g~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--~~~~~~ 235 (437)
T 4aw2_A 159 GDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--TVQSSV 235 (437)
T ss_dssp CBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--CEECCS
T ss_pred CcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--Cccccc
Confidence 99999997632 22333332 333344444999999999999999999999999998764322 233345
Q ss_pred ccCCCccccccccc-----cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 576 IAGTPGYLDPEYYI-----SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 576 ~~gt~~y~aPE~~~-----~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
..||+.|+|||.+. ...++.++|||||||++|||++|+.||............+.... . ..-|......
T Consensus 236 ~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~-----~~~p~~~~~~ 309 (437)
T 4aw2_A 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-R-----FQFPTQVTDV 309 (437)
T ss_dssp CCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-H-----CCCCSSCCCS
T ss_pred ccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc-c-----ccCCcccccC
Confidence 67999999999987 46789999999999999999999999976543222222211110 0 0011111112
Q ss_pred CHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 004935 651 DINSVWKTVEIAMACVSQTSTK--RPTMNQVVM 681 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~--RPsm~evl~ 681 (723)
...+.+++.+|+..+|++ ||+++|+++
T Consensus 310 ----s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 310 ----SENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ----CHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ----CHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 235678999999888888 999999876
No 142
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=291.74 Aligned_cols=235 Identities=25% Similarity=0.369 Sum_probs=177.1
Q ss_pred hhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCCHH
Q 004935 432 RVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 509 (723)
.+||+|+||.||+|.. ++..||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999998 46699999998776666678999999999999999999999999999999999999999999
Q ss_pred HHhccCCC-CCCCHHHH----------HHHHHhccccccCCCCCCEEEcC-CCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 510 ALLLGEEA-DILSWEGR----------LRIAIEAAKVHRDVKSTNILLSG-KFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 510 ~~l~~~~~-~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
+++..... ..+.+... +..+|+...+||||||+||+++. ++.+||+|||+++...... .......
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~ 184 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---PCTETFT 184 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--------CCCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC---CcccccC
Confidence 99976522 22333333 33334444499999999999997 8999999999998753221 1223456
Q ss_pred CCCccccccccccCC--CCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 578 GTPGYLDPEYYISNR--LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 578 gt~~y~aPE~~~~~~--~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
|++.|+|||.+.+.. ++.++||||||++++||++|+.||........ ......... ..+.+.... .
T Consensus 185 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~------~~~~~~~~~----~ 252 (295)
T 2clq_A 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA--AMFKVGMFK------VHPEIPESM----S 252 (295)
T ss_dssp CCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH--HHHHHHHHC------CCCCCCTTS----C
T ss_pred CCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH--HHHhhcccc------ccccccccC----C
Confidence 899999999987653 88999999999999999999999975432211 111111100 111222222 2
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+|++.+|++|||++|+++
T Consensus 253 ~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 253 AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 36779999999999999999999875
No 143
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-33 Score=316.42 Aligned_cols=236 Identities=23% Similarity=0.311 Sum_probs=183.7
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.||+|+||.||+|.. +++.||||++.... ......+.+|+++|++++||||+++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 57899999999999998 47799999986532 22345688999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
|+|.+++.......+++.....++ |+...+||||||+|||++.++.+||+|||+++...... ....
T Consensus 269 g~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----~~~~ 344 (576)
T 2acx_A 269 GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----TIKG 344 (576)
T ss_dssp CBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC----CEEC
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc----cccc
Confidence 999999976544445555544443 33334999999999999999999999999998764321 2334
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||................... . ..+.... .
T Consensus 345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~------~~~p~~~----s 413 (576)
T 2acx_A 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-P------EEYSERF----S 413 (576)
T ss_dssp CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-C------CCCCTTS----C
T ss_pred cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-c------ccCCccC----C
Confidence 579999999999999899999999999999999999999998654433322222222111 1 1111112 2
Q ss_pred HHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRP-----TMNQVVM 681 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RP-----sm~evl~ 681 (723)
..+.+++.+|++.+|.+|| +++||++
T Consensus 414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 3677999999999999999 6677764
No 144
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.8e-33 Score=293.99 Aligned_cols=242 Identities=21% Similarity=0.285 Sum_probs=173.8
Q ss_pred hhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 432 RVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.||+|+||.||+|.. +++.||||++........+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 5799999999999987 5779999999876655667899999999995 799999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCc---EEEEeccCccccCCCCCC----ce
Q 004935 509 QALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSG----TH 571 (723)
Q Consensus 509 ~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~---~kl~DfGla~~~~~~~~~----~~ 571 (723)
.+++.... .+++... +..+|+...+||||||+|||++.++. +||+|||+++........ ..
T Consensus 99 ~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 176 (316)
T 2ac3_A 99 LSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176 (316)
T ss_dssp HHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------------
T ss_pred HHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccc
Confidence 99987542 2333333 33444444499999999999998766 999999999865422111 11
Q ss_pred eeecccCCCcccccccccc-----CCCCChhhHHHHHHHHHHHHcCCCccccCccccc----------HHHHHHHHhcCC
Q 004935 572 VTTTIAGTPGYLDPEYYIS-----NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIH----------ITQWVSFMLGKG 636 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~-----~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~----------~~~~~~~~~~~~ 636 (723)
......||+.|+|||.+.+ ..++.++|||||||+++||++|+.||........ ....+......+
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 256 (316)
T 2ac3_A 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256 (316)
T ss_dssp -----CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHC
T ss_pred ccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhcc
Confidence 1223458999999999875 5689999999999999999999999975432110 001111111111
Q ss_pred CcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 637 DIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 637 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
... . ....... ....+.+++.+|++.||.+|||++|+++
T Consensus 257 ~~~-~-~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 257 KYE-F-PDKDWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCC-C-CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred Ccc-c-Cchhccc----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 110 0 0000001 1236789999999999999999999987
No 145
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.1e-33 Score=289.12 Aligned_cols=237 Identities=25% Similarity=0.330 Sum_probs=174.5
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.+.||+|+||.||++.. ++..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 103 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence 44568999999999999998 46699999987543 3345789999999999999999999999999999999999999
Q ss_pred CCCHHHHhccC--CCCCCCHHHHHHHH----------HhccccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCCC
Q 004935 505 NGNLQALLLGE--EADILSWEGRLRIA----------IEAAKVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 505 ~gsL~~~l~~~--~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
+|+|.+++... ....+++.....++ ++...+||||||+|||+ +.++.+||+|||+++.....
T Consensus 104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~--- 180 (285)
T 3is5_A 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--- 180 (285)
T ss_dssp CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------
T ss_pred CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc---
Confidence 99999988543 12334444444333 33334999999999999 45678999999999875432
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
.......+++.|+|||.+. ..++.++||||||++++||++|+.||...... +.............. ....
T Consensus 181 -~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~----~~~~ 250 (285)
T 3is5_A 181 -EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE----EVQQKATYKEPNYAV----ECRP 250 (285)
T ss_dssp -------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHCCCCCCC------CC
T ss_pred -ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH----HHHhhhccCCccccc----ccCc
Confidence 2234456899999999875 56899999999999999999999999764321 111111111110000 0001
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+|++.+|++|||++|+++
T Consensus 251 ----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 251 ----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1235779999999999999999999985
No 146
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.9e-33 Score=299.40 Aligned_cols=238 Identities=13% Similarity=0.170 Sum_probs=185.9
Q ss_pred hhhhccccCcEEEEEEE-------ECCceEEEEEecCCChhhHHHHHHHHHHHHhcc---CCceeeEEEEEecCCceEEE
Q 004935 430 FERVLGNGGFGTVYHGY-------LDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH---HKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~-------~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~~~~~~lV 499 (723)
+.+.||+|+||.||+|. ..++.||||++..... .++..|++++.+++ |+||+.+++++...+..++|
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv 145 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence 35789999999999994 2567999999986643 46778888888876 99999999999999999999
Q ss_pred EEeCCCCCHHHHhccC---CCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcC-----------CCcEEEE
Q 004935 500 YEFMANGNLQALLLGE---EADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSG-----------KFQAKIA 555 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~---~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~-----------~~~~kl~ 555 (723)
||||++|+|.+++... ....+++...+.++.+++. |||||||+|||++. ++.+||+
T Consensus 146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 9999999999999742 2345666666555554443 99999999999998 8999999
Q ss_pred eccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC
Q 004935 556 DFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK 635 (723)
Q Consensus 556 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~ 635 (723)
|||+++.+..... ........||+.|+|||.+.+..++.++|||||||++|||+||+.||........
T Consensus 226 DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 226 DLGQSIDMKLFPK-GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCTTCEEGGGSCT-TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eCchhhhhhccCC-CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 9999976543222 3344567799999999999999999999999999999999999999864432110
Q ss_pred CCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHHHhhhhH
Q 004935 636 GDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKR-PTMNQVVMELNESLAIE 690 (723)
Q Consensus 636 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~R-Psm~evl~~L~~~~~~~ 690 (723)
.....+..... ...+.+++..|++.+|.+| |+++++.+.|++.++..
T Consensus 294 -----~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 294 -----KPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -----EECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----eechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 01111111111 2345688999999999999 68999999999988654
No 147
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=294.38 Aligned_cols=246 Identities=22% Similarity=0.292 Sum_probs=176.3
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 3578999999999999984 6799999986553 23356789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
++|.+++.... .+++... +..+|+...+||||||+||+++.++.+||+|||+++...... .....
T Consensus 87 ~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~ 161 (311)
T 4agu_A 87 TVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---DYYDD 161 (311)
T ss_dssp EHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----------
T ss_pred chHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---cccCC
Confidence 99999886542 2343333 333444444999999999999999999999999998754221 22234
Q ss_pred ccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC-----------CC-cc--c
Q 004935 576 IAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK-----------GD-IE--S 640 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~-~~--~ 640 (723)
..+|+.|+|||.+.+ ..++.++||||||++++||++|+.||.............. .... .. .. .
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK-TLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-HHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhcccccccccccccccccccCc
Confidence 568999999999876 5689999999999999999999999976544322222111 1111 00 00 0
Q ss_pred ccCCcccCC---CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 641 IVDPRLHED---FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 641 i~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.++.-... ........+.+++.+|++.+|.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 001100000 00112345789999999999999999999986
No 148
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.7e-33 Score=298.53 Aligned_cols=232 Identities=20% Similarity=0.310 Sum_probs=176.4
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCC---ChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS---SAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+++.. ++.||+|++... .....+.+.+|..+++++ +||||+++++++...+..++||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999984 669999999754 334456788999999998 8999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... .+++.. .+..+|+...+||||||+|||++.++++||+|||+++...... ...
T Consensus 93 ~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---~~~ 167 (345)
T 3a8x_A 93 NGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---DTT 167 (345)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---CCB
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC---Ccc
Confidence 9999999987532 233333 3344444445999999999999999999999999998643221 223
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccc----cHHHHHHHHhcCCCcccccCCcccCC
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERI----HITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
....||+.|+|||.+.+..++.++|||||||+++||++|+.||....... .....+...+..... .+...
T Consensus 168 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~~p~~ 241 (345)
T 3a8x_A 168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------RIPRS 241 (345)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------CCCTT
T ss_pred cccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------CCCCC
Confidence 45679999999999999999999999999999999999999996432110 111122222211111 11111
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTM 676 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm 676 (723)
....+.+++.+||+.+|.+||++
T Consensus 242 ----~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 242 ----LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCHHHHHHHHHHhcCCHhHCCCC
Confidence 22357799999999999999996
No 149
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=299.87 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=182.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEe----cCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD----EGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~----~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||++.. +++.||||++........+.+.+|++++++++||||+++++++. .....++|+||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 457899999999999997 57799999997776677788999999999999999999999986 345778999999
Q ss_pred CCCCHHHHhccC--CCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 504 ANGNLQALLLGE--EADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 504 ~~gsL~~~l~~~--~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
++|+|.+++... ....+++...+.++.+++ .+||||||+|||++.++.+||+|||+++..........
T Consensus 113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~ 192 (317)
T 2buj_A 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR 192 (317)
T ss_dssp TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHH
T ss_pred CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccc
Confidence 999999998752 234456555555444443 39999999999999999999999999876421110000
Q ss_pred ------eeecccCCCccccccccccCC---CCChhhHHHHHHHHHHHHcCCCccccCccc-ccHHHHHHHHhcCCCcccc
Q 004935 572 ------VTTTIAGTPGYLDPEYYISNR---LTEKSDVYNFGVVLLEIITSKSVIERTHER-IHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 572 ------~~~~~~gt~~y~aPE~~~~~~---~~~~~DV~SfGvvL~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~i 641 (723)
......||+.|+|||.+.+.. ++.++|||||||+++||++|+.||...... ......... ....
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~--- 266 (317)
T 2buj_A 193 QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN---QLSI--- 266 (317)
T ss_dssp HHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC---C--C---
T ss_pred ccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc---cCCC---
Confidence 012235799999999987554 789999999999999999999999643221 112111111 0000
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhh
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESL 687 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~ 687 (723)
+ . .......+.+++.+||+.+|.+|||++++++.|+.+.
T Consensus 267 --~-~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 267 --P-Q----SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp --C-C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred --C-c----cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 0 0 1112236789999999999999999999999998764
No 150
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5e-33 Score=289.66 Aligned_cols=235 Identities=23% Similarity=0.381 Sum_probs=179.3
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|... +..||+|++... .....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 3578999999999999984 669999998654 344557789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCc---EEEEeccCccccCCCCCCcee
Q 004935 506 GNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~---~kl~DfGla~~~~~~~~~~~~ 572 (723)
|+|.+.+.... .+++... +..+|+...+||||||+||+++.++. +||+|||++...... ..
T Consensus 90 ~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~----~~ 163 (284)
T 3kk8_A 90 GELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EA 163 (284)
T ss_dssp CBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS----CB
T ss_pred CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC----cc
Confidence 99988876542 2333333 33334444499999999999986655 999999999775422 12
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
.....+|+.|+|||.+.+..++.++||||||++++||++|+.||........ ..... .+... ...+.. ..
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~-~~~~~-~~~~~~-~~--- 233 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL----YAQIK-AGAYD-YPSPEW-DT--- 233 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHH-HTCCC-CCTTTT-TT---
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH----HHHHH-hcccc-CCchhh-cc---
Confidence 2345789999999999999999999999999999999999999976543211 11111 11110 000110 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+|++.+|++|||++|+++
T Consensus 234 -~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 234 -VTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2235779999999999999999999987
No 151
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.1e-34 Score=311.29 Aligned_cols=238 Identities=21% Similarity=0.261 Sum_probs=178.1
Q ss_pred hhhccccCcEEEEEEEEC--CceEEEEEecCCCh---hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 431 ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|+.+++.++||||++++++|.+.+..++|||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999984 66899999864221 1123588999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCC---CC----CHHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecccC
Q 004935 506 GNLQALLLGEEAD---IL----SWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 506 gsL~~~l~~~~~~---~l----~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
|+|.+++....-. .. +....+..+|+...+||||||+|||++.++.+||+|||+++...... ........|
T Consensus 154 g~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--~~~~~~~~g 231 (410)
T 3v8s_A 154 GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 231 (410)
T ss_dssp EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--EEECCSCCS
T ss_pred CcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--cccccCCcC
Confidence 9999998754211 11 12223444444445999999999999999999999999998764321 223345689
Q ss_pred CCccccccccccCC----CCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 579 TPGYLDPEYYISNR----LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 579 t~~y~aPE~~~~~~----~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
|+.|+|||.+.+.. ++.++|||||||++|||++|+.||...........+....... . -|.. .. .
T Consensus 232 t~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~-~-----~p~~-~~----~ 300 (410)
T 3v8s_A 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL-T-----FPDD-ND----I 300 (410)
T ss_dssp CGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-C-----CCTT-CC----C
T ss_pred CccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc-c-----CCCc-cc----c
Confidence 99999999998665 7899999999999999999999997654322222221111000 0 0100 11 1
Q ss_pred HHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTK--RPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~--RPsm~evl~ 681 (723)
...+.+++.+|++.+|.+ ||+++||++
T Consensus 301 s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 301 SKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 235779999999999988 999999886
No 152
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.5e-33 Score=293.49 Aligned_cols=251 Identities=19% Similarity=0.262 Sum_probs=185.5
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEE-ecCCceEEEEEeCCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC-DEGTNRGLIYEFMAN 505 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~-~~~~~~~lV~Ey~~~ 505 (723)
.+.+.||+|+||.||+|.. +++.||||++...... .++.+|++++++++|++++..++++ ...+..++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (296)
T 4hgt_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G 88 (296)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-C
Confidence 3467899999999999996 5679999987654322 3588999999999988877766665 6677789999999 9
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCCCc--
Q 004935 506 GNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGT-- 570 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~~~-- 570 (723)
|+|.+++..... .+++...+.++.++ ..+||||||+|||+ +.++.+||+|||+++.........
T Consensus 89 ~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~ 167 (296)
T 4hgt_A 89 PSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI 167 (296)
T ss_dssp CBHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC
T ss_pred CCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccC
Confidence 999999874322 35555554444433 33999999999999 788999999999998765432211
Q ss_pred --eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccc--cH-HHHHHHHhcCCCcccccCCc
Q 004935 571 --HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERI--HI-TQWVSFMLGKGDIESIVDPR 645 (723)
Q Consensus 571 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~--~~-~~~~~~~~~~~~~~~i~d~~ 645 (723)
.......||+.|+|||.+.+..++.++|||||||+++||++|+.||....... .. .......... .. +.
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-----~~ 241 (296)
T 4hgt_A 168 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI-----EV 241 (296)
T ss_dssp CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH-----HH
T ss_pred CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hh-----hh
Confidence 12235679999999999999999999999999999999999999997643321 11 1111111111 00 00
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhh
Q 004935 646 LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETAR 693 (723)
Q Consensus 646 l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~ 693 (723)
+.... ...+.+++.+|++.+|++|||++++++.|+++++.....
T Consensus 242 ~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 242 LCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp HTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred hhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 11111 236789999999999999999999999999998766543
No 153
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.5e-33 Score=302.23 Aligned_cols=231 Identities=23% Similarity=0.334 Sum_probs=178.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|+. +++.||||+++... ....+.+..|.+++.++ +||||+++++++.+.+..++||||+
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 100 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 100 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 357899999999999998 46799999997532 22345688999999987 9999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... .+++.. .+..+|+...+||||||+|||++.++.+||+|||+++...... ...
T Consensus 101 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~~ 175 (345)
T 1xjd_A 101 NGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKT 175 (345)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---CCB
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC---Ccc
Confidence 9999999987532 233333 3334444444999999999999999999999999998643221 223
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
....||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +........ . +.+....
T Consensus 176 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~~~-~------~~~p~~~--- 241 (345)
T 1xjd_A 176 NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHSIRMD-N------PFYPRWL--- 241 (345)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHC-C------CCCCTTS---
T ss_pred cCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH----HHHHHHHhC-C------CCCCccc---
Confidence 4567999999999999999999999999999999999999999765332 111111111 1 1111112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMN-QVV 680 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~-evl 680 (723)
...+.+++.+|++.+|++||++. +++
T Consensus 242 -s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 -EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 23577999999999999999997 554
No 154
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1e-33 Score=295.94 Aligned_cols=244 Identities=25% Similarity=0.339 Sum_probs=175.5
Q ss_pred hhhhccccCcEEEEEEEEC---Cc--eEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLD---GT--EVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~---~~--~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|.+. +. .||||+++... ....+.+.+|++++++++||||+++++++.... .++|+|
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 4578999999999999862 22 68999987542 345678999999999999999999999998765 889999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|+++|+|.+++.... ..+++.....+ +|+...+||||||+||+++.++.+||+|||+++..........
T Consensus 101 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 179 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179 (291)
T ss_dssp CCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE
T ss_pred cccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchh
Confidence 999999999987532 22444444333 3333449999999999999999999999999987654333222
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
......++..|+|||.+.+..++.++||||||++++||++ |+.||..... .+........... .....
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~~~~~~-----~~~~~-- 248 (291)
T 1u46_A 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----SQILHKIDKEGER-----LPRPE-- 248 (291)
T ss_dssp C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTSCCC-----CCCCT--
T ss_pred hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH----HHHHHHHHccCCC-----CCCCc--
Confidence 3344567889999999998889999999999999999999 9999976533 2222222222111 01111
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
.....+.+++.+|++.+|.+|||+.++++.|+++..
T Consensus 249 --~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 249 --DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred --CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 123467899999999999999999999999987764
No 155
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.7e-33 Score=300.93 Aligned_cols=229 Identities=21% Similarity=0.289 Sum_probs=178.6
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 357899999999999998 46799999986532 1234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++..... ++... .+..+|+...+||||||+|||++.++.+||+|||+++..... ..
T Consensus 125 gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196 (350)
T ss_dssp TCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------BC
T ss_pred CCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC------cc
Confidence 9999999975322 33333 333444444499999999999999999999999999875321 23
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +....... +.. .+....
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~~-~~~------~~p~~~---- 261 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI----QIYEKIVS-GKV------RFPSHF---- 261 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH-CCC------CCCTTC----
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH----HHHHHHHc-CCC------CCCCCC----
Confidence 457899999999999999999999999999999999999999765322 22222211 111 111112
Q ss_pred HHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPT-----MNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPs-----m~evl~ 681 (723)
...+.+++.+|++.+|.+||+ ++|+++
T Consensus 262 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 235789999999999999998 676654
No 156
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5e-33 Score=290.78 Aligned_cols=232 Identities=25% Similarity=0.411 Sum_probs=176.2
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEec----CCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE----GTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~lV~E 501 (723)
+.+.||+|+||.||+|... +..||+|++... .....+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 3567999999999999984 558999998653 34456789999999999999999999998865 456899999
Q ss_pred eCCCCCHHHHhccCCCCCCCH----------HHHHHHHHhcc--ccccCCCCCCEEEc-CCCcEEEEeccCccccCCCCC
Q 004935 502 FMANGNLQALLLGEEADILSW----------EGRLRIAIEAA--KVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~----------~~~l~i~~~~a--~vH~Dlk~~NILl~-~~~~~kl~DfGla~~~~~~~~ 568 (723)
|+++|+|.+++.... .+++ ...+..+|+.. .+||||||+|||++ .++.+||+|||++......
T Consensus 110 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-- 185 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-- 185 (290)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--
T ss_pred ecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc--
Confidence 999999999997532 1232 23345555555 69999999999998 7899999999999764321
Q ss_pred CceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
......|++.|+|||.+. +.++.++|||||||+++||++|+.||....... ....... .+.... .+..
T Consensus 186 ---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~-~~~~~~----~~~~ 253 (290)
T 1t4h_A 186 ---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA---QIYRRVT-SGVKPA----SFDK 253 (290)
T ss_dssp ---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---HHHHHHT-TTCCCG----GGGG
T ss_pred ---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH---HHHHHHh-ccCCcc----ccCC
Confidence 223456899999999876 459999999999999999999999997644322 2222221 111111 1111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
. ....+.+++.+|++.+|.+|||++|+++
T Consensus 254 ~----~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 254 V----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp C----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1 1235789999999999999999999986
No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.1e-33 Score=308.94 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=173.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecC------CceEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG------TNRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------~~~~lV 499 (723)
+.+.||+|+||.||+|.. .++.||||++... .....+++.+|+++|++++||||+++++++... ...++|
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 357899999999999988 4679999999754 344567889999999999999999999999654 356999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHH----------HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWE----------GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~----------~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
||||+++ |.+.+... +++. ..+..+|+...+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~E~~~~~-l~~~~~~~----l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--- 217 (464)
T 3ttj_A 146 MELMDAN-LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--- 217 (464)
T ss_dssp EECCSEE-HHHHHTSC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C---
T ss_pred EeCCCCC-HHHHHhhc----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC---
Confidence 9999875 66665432 3333 3344445555599999999999999999999999999875322
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC-------------
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG------------- 636 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------- 636 (723)
.......||+.|+|||.+.+..++.++|||||||+++||++|+.||.+......+...+...-...
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 218 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp -CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred -cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 223456789999999999999999999999999999999999999976543322222222111000
Q ss_pred ------Ccc-----cccCCcccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 637 ------DIE-----SIVDPRLHEDF---DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 637 ------~~~-----~i~d~~l~~~~---~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
... ......+.... .......+.+++.+||+.||++|||++|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00000000000 0112456889999999999999999999986
No 158
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.2e-33 Score=292.82 Aligned_cols=237 Identities=23% Similarity=0.357 Sum_probs=178.9
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
.+.+.+.||+|+||.||++.. +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 344568899999999999998 477999999987655555678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCCCce
Q 004935 505 NGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
+|+|.+++.... .+++.. .+..+|+...+||||||+||++ ++++.+||+|||+++.....
T Consensus 90 ~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----- 162 (304)
T 2jam_A 90 GGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----- 162 (304)
T ss_dssp SCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----
T ss_pred CccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----
Confidence 999999886532 233333 3334444444999999999999 78899999999999764321
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
......|++.|+|||.+.+..++.++|||||||+++||++|+.||....... ...... .+... .......
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~i~-~~~~~--~~~~~~~--- 232 (304)
T 2jam_A 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK----LFEKIK-EGYYE--FESPFWD--- 232 (304)
T ss_dssp TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHH-HCCCC--CCTTTTT---
T ss_pred ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHH-cCCCC--CCccccc---
Confidence 1233468999999999999999999999999999999999999997653321 111111 11110 0111111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+|++.+|++|||++|+++
T Consensus 233 -~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 233 -DISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12246789999999999999999999986
No 159
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.1e-33 Score=288.40 Aligned_cols=230 Identities=21% Similarity=0.322 Sum_probs=157.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-
Confidence 357899999999999987 56799999997643 233567899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+++.....+ +|+...+||||||+|||+++++.+||+|||+++..... ....
T Consensus 96 ~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~ 169 (275)
T 2eue_A 96 GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG----NFLK 169 (275)
T ss_dssp CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------------
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc----cccc
Confidence 668888776542 2444444333 33333499999999999999999999999999865322 1223
Q ss_pred cccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 575 TIAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
...+|+.|+|||.+.+..+ +.++|||||||+++||++|+.||...... ....... .+. ..+...
T Consensus 170 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~-~~~------~~~~~~---- 234 (275)
T 2eue_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP----VLFKNIS-NGV------YTLPKF---- 234 (275)
T ss_dssp -----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH-HTC------CCCCTT----
T ss_pred CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-hCC------CCCCcc----
Confidence 4568999999999987765 78999999999999999999999764322 1112111 111 011111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+|++.+|.+|||++|+++
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1235779999999999999999999975
No 160
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.8e-33 Score=298.72 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=178.3
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||++++++|...+..++||||+++
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 3578999999999999984 6799999986543 33456788999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
++|.+++.... .+++..... .+|+...+||||||+|||++.++.+||+|||+++...... .....
T Consensus 109 ~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~ 183 (331)
T 4aaa_A 109 TILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---EVYDD 183 (331)
T ss_dssp EHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC---------------
T ss_pred chHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc---cccCC
Confidence 99998865432 244444333 3333344999999999999999999999999998654321 22334
Q ss_pred ccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHh-----------cCCCcccccC
Q 004935 576 IAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFML-----------GKGDIESIVD 643 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~i~d 643 (723)
..+++.|+|||.+.+. .++.++|||||||+++||++|+.||........+...+.... ..........
T Consensus 184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T 4aaa_A 184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263 (331)
T ss_dssp CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence 5689999999998875 789999999999999999999999976654333222221110 0000111111
Q ss_pred CcccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 PRLHEDFD-----INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~~l~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.+..... ......+.+++.+|++.+|.+|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111 112456889999999999999999999987
No 161
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.6e-33 Score=289.57 Aligned_cols=250 Identities=19% Similarity=0.258 Sum_probs=186.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEE-ecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYC-DEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~-~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++...... +++.+|++++++++|++++..+.++ ......++||||+ ++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CC
Confidence 357899999999999996 5779999998765432 4689999999999988877666665 6667789999999 99
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCCCc---
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGT--- 570 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~~~--- 570 (723)
+|.+++.... ..+++...+.++.++ ..+||||||+|||+ +.++.+||+|||+++.........
T Consensus 90 ~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (296)
T 3uzp_A 90 SLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP 168 (296)
T ss_dssp BHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred CHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccc
Confidence 9999997432 235555544444433 33999999999999 488899999999998765432211
Q ss_pred -eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc--ccHH-HHHHHHhcCCCcccccCCcc
Q 004935 571 -HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER--IHIT-QWVSFMLGKGDIESIVDPRL 646 (723)
Q Consensus 571 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~--~~~~-~~~~~~~~~~~~~~i~d~~l 646 (723)
.......||+.|+|||.+.+..++.++|||||||+++||++|+.||...... .... ......... .. +.+
T Consensus 169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~ 242 (296)
T 3uzp_A 169 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI-----EVL 242 (296)
T ss_dssp CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH-----HHH
T ss_pred cccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-ch-----HHH
Confidence 1124567999999999999999999999999999999999999999764322 1111 211111111 00 001
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhhh
Q 004935 647 HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETAR 693 (723)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~~ 693 (723)
.... ...+.+++.+|++.+|++|||++++++.|+++.......
T Consensus 243 ~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 243 CKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp TTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 1111 236789999999999999999999999999988666543
No 162
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.4e-33 Score=289.91 Aligned_cols=238 Identities=22% Similarity=0.319 Sum_probs=179.4
Q ss_pred HHHhhhhccccCcEEEEEEEEC--CceEEEEEecCCCh------hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEE
Q 004935 427 TNNFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSA------QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~l 498 (723)
.+.+.+.||+|+||.||++... ++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 3445689999999999999984 67999999875422 135789999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCC----cEEEEeccCccccC
Q 004935 499 IYEFMANGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKF----QAKIADFGLSRTFP 564 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~----~~kl~DfGla~~~~ 564 (723)
||||+++++|.+++.... .+++.....++.+ ...+||||||+||+++.++ .+||+|||+++...
T Consensus 86 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 86 ILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 999999999999986532 3444444444333 3339999999999999877 89999999998753
Q ss_pred CCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCC
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDP 644 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~ 644 (723)
... ......+++.|+|||.+.+..++.++||||||++++||++|+.||........ ..... ..... .++
T Consensus 164 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~-~~~~~--~~~ 232 (283)
T 3bhy_A 164 AGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET----LTNIS-AVNYD--FDE 232 (283)
T ss_dssp ------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHH-TTCCC--CCH
T ss_pred CCC----cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH----HHHhH-hcccC--Ccc
Confidence 221 22345689999999999999999999999999999999999999976543211 11111 11100 001
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..... ....+.+++.+|++.+|++|||+.|+++
T Consensus 233 ~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 233 EYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 11111 1235789999999999999999999987
No 163
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.3e-33 Score=287.55 Aligned_cols=238 Identities=20% Similarity=0.314 Sum_probs=180.2
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|+||+++
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCC
Confidence 3457899999999999998 46799999986442 33457899999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
++|.+++.... .+++.....+ +|+...+||||||+||+++.++.+||+|||++........ ......
T Consensus 90 ~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~ 166 (276)
T 2yex_A 90 GELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNK 166 (276)
T ss_dssp EEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE-ECCBCC
T ss_pred CcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc-hhcccC
Confidence 99999987542 2444443333 3333349999999999999999999999999986532221 122334
Q ss_pred ccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 576 IAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
..+++.|+|||.+.+..+ +.++||||||++++||++|+.||........... . ....... .. .. . ..
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~-~~~~~~~---~~-~~-~----~~ 234 (276)
T 2yex_A 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D-WKEKKTY---LN-PW-K----KI 234 (276)
T ss_dssp CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH--H-HHTTCTT---ST-TG-G----GS
T ss_pred CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH--H-hhhcccc---cC-ch-h----hc
Confidence 578999999999987765 7899999999999999999999976543221111 1 1111000 00 00 1 12
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|++|||++|+++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 235779999999999999999999876
No 164
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.5e-33 Score=306.49 Aligned_cols=245 Identities=21% Similarity=0.260 Sum_probs=183.3
Q ss_pred HhhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhc------cCCceeeEEEEEecCCceEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRI------HHKNLTTLVGYCDEGTNRGLIY 500 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l------~H~nIv~l~g~~~~~~~~~lV~ 500 (723)
.+.+.||+|+||.||+|... ++.||||++... ....+++.+|+++++.+ +|+||+++++++...+..++||
T Consensus 100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 178 (429)
T 3kvw_A 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178 (429)
T ss_dssp EEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred EEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEE
Confidence 34678999999999999884 569999999754 33446788899999888 5679999999999999999999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHHHHHHHhccc----------cccCCCCCCEEEcCCCc--EEEEeccCccccCCCCC
Q 004935 501 EFMANGNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRDVKSTNILLSGKFQ--AKIADFGLSRTFPVEGS 568 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~Dlk~~NILl~~~~~--~kl~DfGla~~~~~~~~ 568 (723)
||+. ++|.+++.......+++.....++.+++. +||||||+|||++.++. +||+|||+++.....
T Consensus 179 e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~-- 255 (429)
T 3kvw_A 179 ELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR-- 255 (429)
T ss_dssp CCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC--
T ss_pred eccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc--
Confidence 9997 69999988765555666665555544443 99999999999999887 999999999764321
Q ss_pred CceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC--------Cccc
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG--------DIES 640 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~ 640 (723)
.....+|+.|+|||.+.+..++.++|||||||+|+||+||+.||........+..++...-... ....
T Consensus 256 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~ 331 (429)
T 3kvw_A 256 ----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKN 331 (429)
T ss_dssp ----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHH
T ss_pred ----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhh
Confidence 2345789999999999999999999999999999999999999987654433333332210000 0000
Q ss_pred ccC---------------Cc------------cc---CCCC------HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 641 IVD---------------PR------------LH---EDFD------INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 641 i~d---------------~~------------l~---~~~~------~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.++ .. +. .... ......+.+++.+||+.||++|||++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 332 FVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 000 00 00 0000 011345789999999999999999999987
No 165
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.3e-33 Score=299.50 Aligned_cols=227 Identities=23% Similarity=0.306 Sum_probs=175.1
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|... ++.||||+++... ....+.+..|.+++..+ +||||+++++++...+..++||||+
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 103 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 103 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCC
Confidence 4578999999999999995 4589999997542 22346788999999988 8999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... .+++.. .+..+|+...+||||||+|||++.++.+||+|||+++...... ...
T Consensus 104 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~~ 178 (353)
T 2i0e_A 104 NGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTT 178 (353)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---CCB
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC---ccc
Confidence 9999999987532 233333 3334444444999999999999999999999999998643221 223
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
....||+.|+|||.+.+..++.++|||||||+++||++|+.||...... +........ . ..+....
T Consensus 179 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----~~~~~i~~~-~------~~~p~~~--- 244 (353)
T 2i0e_A 179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQSIMEH-N------VAYPKSM--- 244 (353)
T ss_dssp CCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHC-C------CCCCTTS---
T ss_pred ccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH----HHHHHHHhC-C------CCCCCCC---
Confidence 4567999999999999999999999999999999999999999765332 222222211 1 1111112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTM 676 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm 676 (723)
...+.+++.+|++.+|.+||++
T Consensus 245 -s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 245 -SKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -CHHHHHHHHHHTCSCTTSCTTC
T ss_pred -CHHHHHHHHHHhhcCHHHcCCC
Confidence 2367799999999999999964
No 166
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9e-33 Score=311.61 Aligned_cols=233 Identities=23% Similarity=0.372 Sum_probs=180.7
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.||+|+||.||+++. +++.||+|++..... .....+..|+++|++++||||+++++++...+..++||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 36799999999999998 467999999965421 2346789999999999999999999999999999999999999
Q ss_pred CCHHHHhccCC--CCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 506 GNLQALLLGEE--ADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 506 gsL~~~l~~~~--~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
|+|.+++.... ...+++.....+ +|+...+||||||+|||++.++.+||+|||+++...... ...
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~---~~~ 346 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---TKT 346 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC---CCB
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC---ccc
Confidence 99999987542 334554444333 333334999999999999999999999999998764322 122
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||..........+........ . ..+....
T Consensus 347 ~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~-~------~~~p~~~--- 416 (543)
T 3c4z_A 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ-A------VTYPDKF--- 416 (543)
T ss_dssp CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC-C------CCCCTTS---
T ss_pred ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc-c------cCCCccc---
Confidence 34579999999999999999999999999999999999999998654433333333332221 1 1111112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMN 677 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~ 677 (723)
...+.+++.+|++.+|.+||++.
T Consensus 417 -s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 417 -SPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp -CHHHHHHHHHHSCSSGGGSCCCB
T ss_pred -CHHHHHHHHHhccCCHhHCCCCc
Confidence 23577999999999999999864
No 167
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.2e-33 Score=312.08 Aligned_cols=232 Identities=22% Similarity=0.301 Sum_probs=171.6
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC---ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++... .......+.+|++++++++||||++++++|...+..++|||||+
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 357899999999999998 4679999998753 23344678899999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCH----------HHHHHHHHh-ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 505 NGNLQALLLGEEADILSW----------EGRLRIAIE-AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~----------~~~l~i~~~-~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
+|+|.+++.... .+++ ...+..+|. ...+||||||+|||++.++.+||+|||+++..... ....
T Consensus 232 ~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~~~ 306 (446)
T 4ejn_A 232 GGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD---GATM 306 (446)
T ss_dssp SCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--------
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC---Cccc
Confidence 999999986532 2333 334555555 45699999999999999999999999999864322 2223
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
....||+.|+|||.+.+..++.++|||||||+|+||++|+.||...... +........ . ..+....
T Consensus 307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~i~~~-~------~~~p~~~--- 372 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELILME-E------IRFPRTL--- 372 (446)
T ss_dssp CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHC-C------CCCCTTS---
T ss_pred ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHHHhC-C------CCCCccC---
Confidence 4567999999999999999999999999999999999999999765332 112221111 1 1111112
Q ss_pred HHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRP-----TMNQVVM 681 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RP-----sm~evl~ 681 (723)
...+.+++.+||+.||.+|| +++|+++
T Consensus 373 -~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 373 -GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 23577999999999999999 9988876
No 168
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5e-33 Score=289.10 Aligned_cols=231 Identities=26% Similarity=0.357 Sum_probs=175.6
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|... +..||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCC
Confidence 3578999999999999984 4589999986432 1234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++... +..+|+...+||||||+|||++.++.+||+|||++...... ...
T Consensus 93 ~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-----~~~ 165 (279)
T 3fdn_A 93 LGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRT 165 (279)
T ss_dssp TEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----------
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-----ccc
Confidence 999999986532 2333333 33334444499999999999999999999999998654321 223
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...+++.|+|||.+.+..++.++||||||++++||++|+.||...... +........ . ..+... .
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~-~------~~~~~~----~ 230 (279)
T 3fdn_A 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ----ETYKRISRV-E------FTFPDF----V 230 (279)
T ss_dssp --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHHHT-C------CCCCTT----S
T ss_pred ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH----HHHHHHHhC-C------CCCCCc----C
Confidence 457899999999999999999999999999999999999999754322 111111111 0 111111 1
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
...+.+++.+|++.+|.+|||++|+++.
T Consensus 231 ~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 231 TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 2356799999999999999999999873
No 169
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6e-33 Score=309.42 Aligned_cols=231 Identities=23% Similarity=0.340 Sum_probs=179.7
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++..... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 457899999999999998 477999999965321 234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++..... .+|+...+||||||+|||++.++.+||+|||+++..... ....
T Consensus 100 gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~----~~~~ 173 (476)
T 2y94_A 100 GGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLR 173 (476)
T ss_dssp SEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT----CCBC
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc----cccc
Confidence 999999997542 244443333 333333499999999999999999999999999876432 1233
Q ss_pred cccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 575 TIAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
...||+.|+|||.+.+..+ +.++|||||||+++||++|+.||...... ....... .+.. ......
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~i~-~~~~------~~p~~~--- 239 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----TLFKKIC-DGIF------YTPQYL--- 239 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----HHHHHHH-TTCC------CCCTTC---
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----HHHHHHh-cCCc------CCCccC---
Confidence 4579999999999988765 68999999999999999999999765332 2122111 1111 011111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|.+|||++|+++
T Consensus 240 -s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 240 -NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 235779999999999999999999987
No 170
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.3e-33 Score=286.82 Aligned_cols=233 Identities=22% Similarity=0.390 Sum_probs=159.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCC
Confidence 357899999999999997 577999999864321 224678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... ..+++.....++.+ ...+||||||+||+++.++.+||+|||++....... ....
T Consensus 95 ~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~ 170 (278)
T 3cok_A 95 NGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH---EKHY 170 (278)
T ss_dssp TEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------
T ss_pred CCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC---Ccce
Confidence 999999987642 23454444444333 334999999999999999999999999998754221 1123
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...+++.|+|||.+.+..++.++||||||++++||++|+.||........+.. .. .. +..+... .
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~----~~---~~~~~~~----~ 235 (278)
T 3cok_A 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK----VV----LA---DYEMPSF----L 235 (278)
T ss_dssp ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CC----SS---CCCCCTT----S
T ss_pred eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH----Hh----hc---ccCCccc----c
Confidence 45689999999999988999999999999999999999999975432211100 00 00 1111111 2
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|++|||++++++
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 236779999999999999999999886
No 171
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3e-33 Score=298.27 Aligned_cols=246 Identities=21% Similarity=0.274 Sum_probs=171.5
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChh--hHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ--GYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|.. +++.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 117 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN 117 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC
Confidence 357899999999999987 5679999999765432 345688999999999999999999999999999999999984
Q ss_pred CCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEc-----CCCcEEEEeccCccccCCCCCCc
Q 004935 506 GNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLS-----GKFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~-----~~~~~kl~DfGla~~~~~~~~~~ 570 (723)
+|.+++..... +++... +..+|+...+||||||+|||++ .++.+||+|||+++..... .
T Consensus 118 -~L~~~~~~~~~--~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~---~ 191 (329)
T 3gbz_A 118 -DLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP---I 191 (329)
T ss_dssp -EHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------
T ss_pred -CHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc---c
Confidence 99999876532 343333 3333444449999999999994 5556999999999875322 1
Q ss_pred eeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--ccccc-----
Q 004935 571 HVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IESIV----- 642 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i~----- 642 (723)
.......+|+.|+|||.+.+. .++.++|||||||+++||++|+.||........+............ .....
T Consensus 192 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (329)
T 3gbz_A 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDW 271 (329)
T ss_dssp --------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhh
Confidence 223345679999999999875 4899999999999999999999999766544333333322111100 00000
Q ss_pred ---CCcccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 643 ---DPRLHEDF-----DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 643 ---d~~l~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+...... .......+.+++.+|++.||++|||++|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 272 KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000 0012246789999999999999999999875
No 172
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.3e-32 Score=293.18 Aligned_cols=245 Identities=20% Similarity=0.324 Sum_probs=176.9
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhcc-CCceeeEEEEEec--CCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVGYCDE--GTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~--~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++.... .+.+.+|++++++++ ||||+++++++.. ....++||||++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 116 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 116 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC
Confidence 457899999999999987 56799999997544 367899999999997 9999999999987 667899999999
Q ss_pred CCCHHHHhccCCC-CCC----CHHHHHHHHHhccccccCCCCCCEEEcCCC-cEEEEeccCccccCCCCCCceeeecccC
Q 004935 505 NGNLQALLLGEEA-DIL----SWEGRLRIAIEAAKVHRDVKSTNILLSGKF-QAKIADFGLSRTFPVEGSGTHVTTTIAG 578 (723)
Q Consensus 505 ~gsL~~~l~~~~~-~~l----~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~~~~~~~~~g 578 (723)
+++|.+++..-.. ... +....+..+|+...+||||||+|||++.++ .+||+|||+++...... ......+
T Consensus 117 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~ 192 (330)
T 3nsz_A 117 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----EYNVRVA 192 (330)
T ss_dssp CCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC----CCCSCCS
T ss_pred chhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC----ccccccc
Confidence 9999999864211 111 222334444444459999999999999776 89999999998764322 2234568
Q ss_pred CCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCccc-------ccCC------
Q 004935 579 TPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIES-------IVDP------ 644 (723)
Q Consensus 579 t~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------i~d~------ 644 (723)
+..|+|||.+.+ ..++.++|||||||+++||++|+.||.......................+ ..++
T Consensus 193 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (330)
T 3nsz_A 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 272 (330)
T ss_dssp CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred cccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence 999999999877 67899999999999999999999999544322111111111111000000 0000
Q ss_pred ----------cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 ----------RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ----------~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.............+.+++.+|++.||++|||++|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011111112456789999999999999999999986
No 173
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-33 Score=305.05 Aligned_cols=249 Identities=23% Similarity=0.387 Sum_probs=170.5
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhcc-CCceeeEEEEEecCC--ceEEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIH-HKNLTTLVGYCDEGT--NRGLIYE 501 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~--~~~lV~E 501 (723)
.+.+.||+|+||.||+|.. +++.||||++... .....+.+.+|+.+++++. ||||+++++++...+ ..++|||
T Consensus 12 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e 91 (388)
T 3oz6_A 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFD 91 (388)
T ss_dssp EEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEE
T ss_pred EEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEec
Confidence 3457899999999999988 4679999998653 3455677899999999997 999999999997544 6899999
Q ss_pred eCCCCCHHHHhccCCCCCCCHH----------HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC---
Q 004935 502 FMANGNLQALLLGEEADILSWE----------GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS--- 568 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~----------~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~--- 568 (723)
||+ |+|.+++... .+.+. ..+..+|+...+||||||+|||++.++.+||+|||+++.+.....
T Consensus 92 ~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 167 (388)
T 3oz6_A 92 YME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167 (388)
T ss_dssp CCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC
T ss_pred ccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc
Confidence 998 5899988764 23333 334445555559999999999999999999999999986532110
Q ss_pred ---------------CceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHH
Q 004935 569 ---------------GTHVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM 632 (723)
Q Consensus 569 ---------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~ 632 (723)
.........||+.|+|||.+.+ ..++.++|||||||+++||++|+.||.+......+...+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~-~ 246 (388)
T 3oz6_A 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-V 246 (388)
T ss_dssp CGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-H
T ss_pred cccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-h
Confidence 0112334579999999999876 6789999999999999999999999976544333322221 1
Q ss_pred hcCCCccc---ccCC------------------cccCCC------------CHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 004935 633 LGKGDIES---IVDP------------------RLHEDF------------DINSVWKTVEIAMACVSQTSTKRPTMNQV 679 (723)
Q Consensus 633 ~~~~~~~~---i~d~------------------~l~~~~------------~~~~~~~l~~l~~~Cl~~~p~~RPsm~ev 679 (723)
+....... +..+ .....+ .......+.+++.+||+.||++|||++|+
T Consensus 247 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~ 326 (388)
T 3oz6_A 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDA 326 (388)
T ss_dssp HCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred cCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHH
Confidence 11110000 0000 000000 00112367899999999999999999998
Q ss_pred HHH
Q 004935 680 VME 682 (723)
Q Consensus 680 l~~ 682 (723)
++.
T Consensus 327 l~H 329 (388)
T 3oz6_A 327 LKH 329 (388)
T ss_dssp TTS
T ss_pred hCC
Confidence 863
No 174
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-32 Score=295.55 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=178.7
Q ss_pred HhhhhccccCcEEEEEEEEC--CceEEEEEecCCChhh-----HHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQG-----YKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~-----~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
.+.+.||+|+||.||+|... ++.||||++....... .+.+.+|++++++++||||+++++++...+..++|||
T Consensus 13 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (346)
T 1ua2_A 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFD 92 (346)
T ss_dssp CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEE
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEE
Confidence 34578999999999999984 6799999987543211 2468899999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCCC-----CCCC----HHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 502 FMANGNLQALLLGEEA-----DILS----WEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~-----~~l~----~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
|+++ +|.+++..... .... ....+..+|+...+||||||+|||++.++.+||+|||+++...... ..
T Consensus 93 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---~~ 168 (346)
T 1ua2_A 93 FMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RA 168 (346)
T ss_dssp CCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---CC
T ss_pred cCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc---cc
Confidence 9996 89888875421 1112 2233444555555999999999999999999999999998764322 22
Q ss_pred eecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--cccc---cCC--
Q 004935 573 TTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IESI---VDP-- 644 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~i---~d~-- 644 (723)
.....+|+.|+|||.+.+. .++.++|||||||+++||++|++||........+............ .... .+.
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccc
Confidence 3345789999999998764 5899999999999999999999998766543333333332211100 0000 000
Q ss_pred -cccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 -RLHEDFD-----INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 -~l~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.-..... ......+.+++.+|++.+|++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000001 112346889999999999999999999887
No 175
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-33 Score=298.41 Aligned_cols=226 Identities=22% Similarity=0.332 Sum_probs=176.9
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh--------hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA--------QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV 499 (723)
+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEE
Confidence 357899999999999987 567999999876531 1234678899999999999999999999999999999
Q ss_pred EEeCCCC-CHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 004935 500 YEFMANG-NLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 500 ~Ey~~~g-sL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 568 (723)
|||+..| +|.+++.... .+++.....++. ....+||||||+|||++.++.+||+|||+++......
T Consensus 108 ~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~- 184 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK- 184 (335)
T ss_dssp EECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred EEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC-
Confidence 9999877 9999987643 244444444333 3334999999999999999999999999998764322
Q ss_pred CceeeecccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCccc
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLH 647 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~ 647 (723)
......||+.|+|||.+.+..+ +.++|||||||+++||++|+.||....... .....+ .
T Consensus 185 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------~~~~~~--~ 244 (335)
T 3dls_A 185 ---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------------EAAIHP--P 244 (335)
T ss_dssp ---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------------TTCCCC--S
T ss_pred ---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------------hhccCC--C
Confidence 2234568999999999988876 789999999999999999999996532210 000000 0
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 648 EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 648 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
.. ....+.+++.+|++.+|.+|||++++++.
T Consensus 245 ~~----~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 245 YL----VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred cc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 12357899999999999999999999874
No 176
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=304.02 Aligned_cols=237 Identities=21% Similarity=0.271 Sum_probs=176.4
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
.+.||+|+||.||+++. +++.||||+++.... ...+.+.+|.+++.+++||||+++++++.+.+..++||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 47899999999999998 477999999975321 1224588999999999999999999999999999999999999
Q ss_pred CCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
|+|.+++..... .+++.. .+..+|+...+||||||+|||++.++++||+|||+++...... ......
T Consensus 146 g~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--~~~~~~ 222 (412)
T 2vd5_A 146 GDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--TVRSLV 222 (412)
T ss_dssp CBHHHHHHHHSS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--CEECSS
T ss_pred CcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC--ccccce
Confidence 999999975321 233332 3334444444999999999999999999999999998764322 222344
Q ss_pred ccCCCccccccccc-------cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 576 IAGTPGYLDPEYYI-------SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 576 ~~gt~~y~aPE~~~-------~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
..||+.|+|||.+. ...++.++|||||||++|||++|+.||............+.... . ..-|.+..
T Consensus 223 ~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~-----~~~p~~~~ 296 (412)
T 2vd5_A 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKE-H-----LSLPLVDE 296 (412)
T ss_dssp CCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-H-----CCCC----
T ss_pred eccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-C-----cCCCcccc
Confidence 67999999999987 35689999999999999999999999976543222222211110 0 00111111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKR---PTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~R---Psm~evl~ 681 (723)
.. ...+.+++.+|+. +|.+| |+++|+++
T Consensus 297 ~~----s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 297 GV----PEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CC----CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CC----CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 12 2357799999999 99998 58888765
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.1e-33 Score=307.24 Aligned_cols=237 Identities=22% Similarity=0.395 Sum_probs=169.5
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--------hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceE
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--------AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRG 497 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--------~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 497 (723)
+.+.+.||+|+||.||+|.. +++.||||++.... ......+.+|+++|++++||||+++++++.. +..+
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~ 215 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYY 215 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEE
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceE
Confidence 34467899999999999998 45699999986431 1122358899999999999999999999854 5578
Q ss_pred EEEEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCC---CcEEEEeccCccccC
Q 004935 498 LIYEFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGK---FQAKIADFGLSRTFP 564 (723)
Q Consensus 498 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~---~~~kl~DfGla~~~~ 564 (723)
+|||||++|+|.+++.... .+++... +..+|+...+||||||+|||++.+ +.+||+|||+++...
T Consensus 216 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~ 293 (419)
T 3i6u_A 216 IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293 (419)
T ss_dssp EEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC
T ss_pred EEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecC
Confidence 9999999999999887543 2444433 333444444999999999999754 459999999998764
Q ss_pred CCCCCceeeecccCCCcccccccccc---CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccc
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYIS---NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 641 (723)
.. .......||+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+...+.. +....
T Consensus 294 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~----~~~~~- 364 (419)
T 3i6u_A 294 ET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS----GKYNF- 364 (419)
T ss_dssp ---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT----TCCCC-
T ss_pred CC----ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc----CCCCC-
Confidence 22 22345679999999999863 56888999999999999999999999765544444332221 11100
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+..... ....+.+++.+|++.+|++|||++|+++
T Consensus 365 -~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 365 -IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -Cchhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0111111 1236789999999999999999999886
No 178
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.9e-34 Score=307.90 Aligned_cols=232 Identities=17% Similarity=0.145 Sum_probs=169.7
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCC---ChhhHHHHHHHH---HHHHhccCCceeeEE-------EEEecCCc
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS---SAQGYKQFQAEV---ELLMRIHHKNLTTLV-------GYCDEGTN 495 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~f~~Ei---~~l~~l~H~nIv~l~-------g~~~~~~~ 495 (723)
.+.||+|+||.||+|.. +++.||||++... .....+.|.+|+ +++++++||||++++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 57899999999999996 4779999999743 334567899999 555566899999998 66655532
Q ss_pred -----------------eEEEEEeCCCCCHHHHhccCC-----CCCCCHHHHHHHHH----------hccccccCCCCCC
Q 004935 496 -----------------RGLIYEFMANGNLQALLLGEE-----ADILSWEGRLRIAI----------EAAKVHRDVKSTN 543 (723)
Q Consensus 496 -----------------~~lV~Ey~~~gsL~~~l~~~~-----~~~l~~~~~l~i~~----------~~a~vH~Dlk~~N 543 (723)
.++||||+ +|+|.+++.... ...+.+..++.++. +...+||||||+|
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~N 236 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 236 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 78999999 689999987531 11222333333333 3333999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCceeeecccCCCccccccccccC-----------CCCChhhHHHHHHHHHHHHcC
Q 004935 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN-----------RLTEKSDVYNFGVVLLEIITS 612 (723)
Q Consensus 544 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DV~SfGvvL~elltg 612 (723)
||++.++.+||+|||+++... .......| +.|+|||.+.+. .++.++|||||||++|||++|
T Consensus 237 Ill~~~~~~kL~DFG~a~~~~------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 237 IVLDQRGGVFLTGFEHLVRDG------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp EEECTTCCEEECCGGGCEETT------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred EEEcCCCCEEEEechhheecC------CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 999999999999999998632 22344567 999999999887 899999999999999999999
Q ss_pred CCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHhhhh
Q 004935 613 KSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM--ELNESLAI 689 (723)
Q Consensus 613 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~--~L~~~~~~ 689 (723)
+.||........ ...+.. .. ... ...+.+++.+||+.+|++|||+.|+++ .++++.+.
T Consensus 310 ~~Pf~~~~~~~~-------------~~~~~~-~~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~ 369 (377)
T 3byv_A 310 DLPITKDAALGG-------------SEWIFR-SC-KNI----PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTE 369 (377)
T ss_dssp SCCC------CC-------------SGGGGS-SC-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHH
T ss_pred CCCCcccccccc-------------hhhhhh-hc-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHH
Confidence 999965432111 111111 00 111 236789999999999999999999986 45554433
No 179
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.98 E-value=4.5e-33 Score=300.67 Aligned_cols=243 Identities=20% Similarity=0.270 Sum_probs=178.0
Q ss_pred hhhccccCcEEEEEEEEC--CceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 431 ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
.+.||+|+||.||+|... +..||+|++... .....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 468999999999999995 679999999765 34455789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHH----------HHHHHHhc-cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 508 LQALLLGEEADILSWEG----------RLRIAIEA-AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~----------~l~i~~~~-a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
|.+++.... .+++.. .+..+|+. ..+||||||+|||++.++.+||+|||+++.... ......
T Consensus 118 L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-----~~~~~~ 190 (360)
T 3eqc_A 118 LDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----SMANSF 190 (360)
T ss_dssp HHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-----HC----
T ss_pred HHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc-----ccccCC
Confidence 999987542 233332 33344443 459999999999999999999999999976421 122345
Q ss_pred cCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC---------------------
Q 004935 577 AGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK--------------------- 635 (723)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~--------------------- 635 (723)
.||+.|+|||.+.+..++.++|||||||+++||++|+.||........ ..........
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL-ELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH-HHHHC--------------------------
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhcccccccCCCCCCCcccCCCccccccc
Confidence 789999999999999999999999999999999999999975432111 0000000000
Q ss_pred -----CCcccccC----CcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 636 -----GDIESIVD----PRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 636 -----~~~~~i~d----~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.++ ..............+.+++.+|++.+|++|||++|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000 00000000012335789999999999999999999987
No 180
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=3.3e-33 Score=301.23 Aligned_cols=239 Identities=23% Similarity=0.313 Sum_probs=180.6
Q ss_pred HhhhhccccCcEEEEEEEE-----CCceEEEEEecCCC----hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEE
Q 004935 429 NFERVLGNGGFGTVYHGYL-----DGTEVAVKMLSPSS----AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~-----~~~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 498 (723)
.+.+.||+|+||.||+++. .++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 136 (355)
T 1vzo_A 57 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 136 (355)
T ss_dssp EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred EEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEE
Confidence 3467899999999999998 56799999987532 12335678899999999 69999999999999999999
Q ss_pred EEEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 004935 499 IYEFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 568 (723)
||||+++|+|.+++.... .+++... +..+|+...+||||||+|||++.++.+||+|||+++......
T Consensus 137 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~- 213 (355)
T 1vzo_A 137 ILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE- 213 (355)
T ss_dssp EECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG-
T ss_pred EeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCC-
Confidence 999999999999987542 2333333 334444444999999999999999999999999998653221
Q ss_pred CceeeecccCCCcccccccccc--CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcc
Q 004935 569 GTHVTTTIAGTPGYLDPEYYIS--NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRL 646 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l 646 (723)
........||+.|+|||.+.+ ..++.++|||||||+||||++|+.||...........+........ +.+
T Consensus 214 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~~ 285 (355)
T 1vzo_A 214 -TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-------PPY 285 (355)
T ss_dssp -GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-------CCC
T ss_pred -CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC-------CCC
Confidence 122334579999999999986 3478999999999999999999999976554444444443333221 111
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 004935 647 HEDFDINSVWKTVEIAMACVSQTSTKRP-----TMNQVVME 682 (723)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----sm~evl~~ 682 (723)
... ....+.+++.+||+.+|.+|| +++|+++.
T Consensus 286 ~~~----~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 286 PQE----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CTT----SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred Ccc----cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 112 223577999999999999999 88888764
No 181
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.98 E-value=1.5e-32 Score=287.87 Aligned_cols=232 Identities=20% Similarity=0.323 Sum_probs=180.8
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCC---ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
..+.||+|+||.||++... ++.||+|++... .....+.+.+|++++++++|+||+++++++...+..++||||++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence 3578999999999999984 568999998653 23455678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+++...+.+ +|+...+||||||+||+++.++.+||+|||+++...... ....
T Consensus 99 ~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~ 173 (294)
T 2rku_A 99 RRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKK 173 (294)
T ss_dssp TCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---CCBC
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc---cccc
Confidence 999999886532 2444444333 333334999999999999999999999999998764322 1233
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...+++.|+|||.+.+..++.++||||||++++||++|+.||....... ...... ... ..+....
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~-~~~------~~~~~~~---- 238 (294)
T 2rku_A 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TYLRIK-KNE------YSIPKHI---- 238 (294)
T ss_dssp CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHH-TTC------CCCCTTS----
T ss_pred cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHh-hcc------CCCcccc----
Confidence 4568999999999999899999999999999999999999997653221 111111 111 1111111
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|++|||++|+++
T Consensus 239 ~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 239 NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 235779999999999999999999887
No 182
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=1.7e-32 Score=318.15 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=184.6
Q ss_pred HhhhhccccCcEEEEEEEEC-----CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 429 NFERVLGNGGFGTVYHGYLD-----GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~-----~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.+.||+|+||.||+|.+. +..||||++.... ....+.|.+|+.++++++||||+++++++. .+..++||||
T Consensus 393 ~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~ 471 (656)
T 2j0j_A 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL 471 (656)
T ss_dssp EEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred EEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEc
Confidence 34578999999999999883 2369999987643 344578999999999999999999999985 4568999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 503 MANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
+++|+|.+++.... ..+++...+.++. +...+||||||+|||++.++.+||+|||+++...... ...
T Consensus 472 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~--~~~ 548 (656)
T 2j0j_A 472 CTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--YYK 548 (656)
T ss_dssp CTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-------
T ss_pred CCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc--cee
Confidence 99999999997542 2355555444443 3334999999999999999999999999998764321 122
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... .......... +.+..
T Consensus 549 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~~~~i~~~~~------~~~~~--- 615 (656)
T 2j0j_A 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VIGRIENGER------LPMPP--- 615 (656)
T ss_dssp -----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHHTCC------CCCCT---
T ss_pred ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHcCCC------CCCCc---
Confidence 233456789999999998999999999999999999997 999997654321 1111111111 11111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 652 INSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 652 ~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
.....+.+++.+||+.+|++|||+.++++.|+++++.++
T Consensus 616 -~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k 654 (656)
T 2j0j_A 616 -NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654 (656)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 223467899999999999999999999999999987654
No 183
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.98 E-value=5.5e-33 Score=292.09 Aligned_cols=236 Identities=20% Similarity=0.328 Sum_probs=174.5
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|... +..||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4578999999999999994 66999999987766667889999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.+++.... ..+++.....++ |+...+||||||+||+++.++.+||+|||++...... ........
T Consensus 103 l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~ 178 (302)
T 2j7t_A 103 VDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---LQKRDSFI 178 (302)
T ss_dssp HHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---HHC-----
T ss_pred HHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc---cccccccc
Confidence 999886532 224444444433 3333499999999999999999999999987543111 11123356
Q ss_pred CCCccccccccc-----cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 578 GTPGYLDPEYYI-----SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 578 gt~~y~aPE~~~-----~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
+++.|+|||.+. ...++.++||||||++++||++|+.|+........ ......... ..... ..
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~-~~~~~-------~~ 246 (302)
T 2j7t_A 179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----LLKIAKSDP-PTLLT-------PS 246 (302)
T ss_dssp CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCC-CCCSS-------GG
T ss_pred CChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----HHHHhccCC-cccCC-------cc
Confidence 899999999983 56789999999999999999999999976543211 111111111 11100 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+|++.+|.+|||++++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 12236789999999999999999999986
No 184
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.98 E-value=2.6e-32 Score=287.26 Aligned_cols=232 Identities=25% Similarity=0.401 Sum_probs=182.5
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|+.++++++||||+++++++......++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 57899999999999987 46799999997553 3446789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.+++... .+++.....++.+ ...+||||||+||+++.++.+||+|||++....... .......
T Consensus 107 L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~ 180 (303)
T 3a7i_A 107 ALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---IKRNTFV 180 (303)
T ss_dssp HHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---CCBCCCC
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc---cccCccC
Confidence 99998653 3455544444333 334999999999999999999999999998754321 1223456
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+++.|+|||.+.+..++.++||||||++++||++|+.||...... +...... .+. .+.+..... ..
T Consensus 181 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~-~~~-----~~~~~~~~~----~~ 246 (303)
T 3a7i_A 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIP-KNN-----PPTLEGNYS----KP 246 (303)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHH-HSC-----CCCCCSSCC----HH
T ss_pred CCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----HHHHHhh-cCC-----CCCCccccC----HH
Confidence 899999999999999999999999999999999999999754321 1111111 111 112222222 35
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
+.+++.+|++.+|.+|||+.|+++.
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhC
Confidence 7899999999999999999999874
No 185
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.98 E-value=4e-33 Score=289.60 Aligned_cols=238 Identities=24% Similarity=0.356 Sum_probs=180.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEe--cCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCD--EGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||++.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 357899999999999998 46799999997543 445567999999999999999999999874 456789999999
Q ss_pred CCCCHHHHhccC--CCCCCCHHHH----------HHHHHhcc-----ccccCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 004935 504 ANGNLQALLLGE--EADILSWEGR----------LRIAIEAA-----KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVE 566 (723)
Q Consensus 504 ~~gsL~~~l~~~--~~~~l~~~~~----------l~i~~~~a-----~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 566 (723)
++|+|.+++... ....+++... +..+|+.. .+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 999999998753 2233555444 33444444 699999999999999999999999999875322
Q ss_pred CCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcc
Q 004935 567 GSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRL 646 (723)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l 646 (723)
. .......+++.|+|||.+.+..++.++||||||++++||++|+.||...... +... .+..+... .+
T Consensus 170 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-~i~~~~~~-----~~ 236 (279)
T 2w5a_A 170 T---SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----ELAG-KIREGKFR-----RI 236 (279)
T ss_dssp C---HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHH-HHHHTCCC-----CC
T ss_pred c---ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----HHHH-HHhhcccc-----cC
Confidence 1 1123356899999999999989999999999999999999999999765321 1111 11122111 11
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 004935 647 HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELN 684 (723)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~ 684 (723)
... ....+.+++.+|++.+|.+|||++|+++.+.
T Consensus 237 ~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 237 PYR----YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred Ccc----cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111 2236789999999999999999999998553
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.98 E-value=2.1e-32 Score=293.12 Aligned_cols=237 Identities=22% Similarity=0.336 Sum_probs=176.7
Q ss_pred HHhhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeCC
Q 004935 428 NNFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.+.||+|+||.||++... ++.||||++..... .+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 99 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence 344678999999999999984 66999999976542 245788899888 79999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCC----CcEEEEeccCccccCCCCCCc
Q 004935 505 NGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGK----FQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~----~~~kl~DfGla~~~~~~~~~~ 570 (723)
+|+|.+++.... .+++... +..+|+...+||||||+|||+.++ +.+||+|||+++......
T Consensus 100 gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~--- 174 (342)
T 2qr7_A 100 GGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--- 174 (342)
T ss_dssp SCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---
Confidence 999999987542 2343333 333444444999999999998543 359999999998764322
Q ss_pred eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 571 HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
.......+|+.|+|||.+.+..++.++|||||||++|||++|+.||...... ...+.... +..+... +....
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~-i~~~~~~------~~~~~ 246 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-TPEEILAR-IGSGKFS------LSGGY 246 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-CHHHHHHH-HHHCCCC------CCSTT
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-CHHHHHHH-HccCCcc------cCccc
Confidence 2233457899999999998888999999999999999999999999754321 22222222 2222111 11111
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.......+.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1112236779999999999999999999886
No 187
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.98 E-value=1.6e-32 Score=293.45 Aligned_cols=232 Identities=19% Similarity=0.328 Sum_probs=180.8
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCC---ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPS---SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
..+.||+|+||.||++... ++.||+|++... .....+.+.+|+.++++++|+||+++++++.+.+..++||||++
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence 3578999999999999984 568999998653 33455678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+++...+.+ +|+...+||||||+|||++.++.+||+|||+++...... ....
T Consensus 125 ~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---~~~~ 199 (335)
T 2owb_A 125 RRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---ERKK 199 (335)
T ss_dssp TCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---CCBC
T ss_pred CCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc---cccc
Confidence 999999886532 2444444333 333344999999999999999999999999998764322 1233
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...|++.|+|||.+.+..++.++||||||++++||++|+.||........ ....... . ..+.....
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~-~------~~~~~~~~--- 265 (335)
T 2owb_A 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKN-E------YSIPKHIN--- 265 (335)
T ss_dssp CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHT-C------CCCCTTSC---
T ss_pred ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHhcC-C------CCCCccCC---
Confidence 45789999999999999999999999999999999999999976432211 1111111 1 11111122
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.+++.+|++.+|++|||++|+++
T Consensus 266 -~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 266 -PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 35678999999999999999999987
No 188
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.98 E-value=5.6e-33 Score=300.76 Aligned_cols=238 Identities=24% Similarity=0.301 Sum_probs=172.5
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHH-HHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVEL-LMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|+.. +..||||++.... ....+.+..|..+ ++.++||||+++++++...+..++||||+
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 4678999999999999984 5689999997543 2234556777776 57789999999999999999999999999
Q ss_pred CCCCHHHHhccCCCC----C----CCHHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 504 ANGNLQALLLGEEAD----I----LSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~----~----l~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
++|+|.+++.....- . .+....+..+|+...+||||||+|||++.++++||+|||+++...... .....
T Consensus 122 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~---~~~~~ 198 (373)
T 2r5t_A 122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---STTST 198 (373)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC---CCCCS
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC---Ccccc
Confidence 999999998753211 1 122233444445555999999999999999999999999998643221 22345
Q ss_pred ccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHH
Q 004935 576 IAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSV 655 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~ 655 (723)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||...... +........ . ..+.... .
T Consensus 199 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----~~~~~i~~~-~------~~~~~~~----~ 263 (373)
T 2r5t_A 199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA----EMYDNILNK-P------LQLKPNI----T 263 (373)
T ss_dssp BSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH----HHHHHHHHS-C------CCCCSSS----C
T ss_pred ccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHhc-c------cCCCCCC----C
Confidence 67999999999999999999999999999999999999999765432 222222211 1 1111122 2
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 004935 656 WKTVEIAMACVSQTSTKRPTMNQVVMELNE 685 (723)
Q Consensus 656 ~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~ 685 (723)
..+.+++.+|++.+|.+||++.+.++.+.+
T Consensus 264 ~~~~~li~~lL~~dp~~R~~~~~~~~~i~~ 293 (373)
T 2r5t_A 264 NSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSTTTTTTHHHHHT
T ss_pred HHHHHHHHHHcccCHHhCCCCCCCHHHHhC
Confidence 357799999999999999999765555544
No 189
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.98 E-value=2.6e-32 Score=286.53 Aligned_cols=248 Identities=19% Similarity=0.267 Sum_probs=179.9
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh--hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 356899999999999998 467999999875432 223678899999999999999999999999999999999998
Q ss_pred CCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 506 GNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
|+|.+++.......+++.....+ +|+...+||||||+||+++.++.+||+|||+++...... .....
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~ 162 (299)
T 2r3i_A 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTH 162 (299)
T ss_dssp EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS---BCTTS
T ss_pred CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc---cccCc
Confidence 69999987664444555444333 333344999999999999999999999999998653221 12233
Q ss_pred ccCCCccccccccccCC-CCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCc-----ccc--cCCccc
Q 004935 576 IAGTPGYLDPEYYISNR-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDI-----ESI--VDPRLH 647 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~~~-~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~i--~d~~l~ 647 (723)
..+++.|+|||.+.+.. ++.++|||||||+++||+||+.||........+....+........ ... ..+.+.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T 2r3i_A 163 EVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242 (299)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred ccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhh
Confidence 46799999999988765 7999999999999999999999998665433333333322111100 000 001110
Q ss_pred CCC-------CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 648 EDF-------DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 648 ~~~-------~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
... .......+.+++.+|++.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0012246789999999999999999999876
No 190
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.98 E-value=5.3e-32 Score=294.79 Aligned_cols=244 Identities=21% Similarity=0.272 Sum_probs=180.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhcc-CC-----ceeeEEEEEecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HK-----NLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~-----nIv~l~g~~~~~~~~~lV~E 501 (723)
+.+.||+|+||.||+|.. +++.||||+++.. ....+++..|+++++.++ |+ +|+++++++...+..++|||
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 136 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE 136 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEe
Confidence 457899999999999998 4668999999754 334567888999999885 54 49999999999999999999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHHHHhc------------cccccCCCCCCEEEc--CCCcEEEEeccCccccCCCC
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRIAIEA------------AKVHRDVKSTNILLS--GKFQAKIADFGLSRTFPVEG 567 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~------------a~vH~Dlk~~NILl~--~~~~~kl~DfGla~~~~~~~ 567 (723)
|++ |+|.+++.......+++.....++.++ ..+||||||+|||++ .++.+||+|||+++.....
T Consensus 137 ~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~- 214 (382)
T 2vx3_A 137 MLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR- 214 (382)
T ss_dssp CCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC-
T ss_pred cCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc-
Confidence 996 599999987654446665554444332 239999999999994 5788999999999876321
Q ss_pred CCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC--------C--
Q 004935 568 SGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG--------D-- 637 (723)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~-- 637 (723)
.....+|+.|+|||.+.+..++.++|||||||+++||+||+.||........+...+...-... .
T Consensus 215 -----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 289 (382)
T 2vx3_A 215 -----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKAR 289 (382)
T ss_dssp -----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHH
T ss_pred -----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHH
Confidence 2345789999999999999999999999999999999999999986654333333222110000 0
Q ss_pred --cccccCCc------------c-------------------------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 004935 638 --IESIVDPR------------L-------------------------HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQ 678 (723)
Q Consensus 638 --~~~i~d~~------------l-------------------------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~e 678 (723)
...+.+.. . .......+...+.+++.+||+.||++|||++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e 369 (382)
T 2vx3_A 290 KFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 369 (382)
T ss_dssp HHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred HHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHH
Confidence 00000000 0 00012234457899999999999999999999
Q ss_pred HHH
Q 004935 679 VVM 681 (723)
Q Consensus 679 vl~ 681 (723)
+++
T Consensus 370 ~L~ 372 (382)
T 2vx3_A 370 ALQ 372 (382)
T ss_dssp HTT
T ss_pred Hhc
Confidence 875
No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=2.1e-32 Score=296.13 Aligned_cols=241 Identities=24% Similarity=0.311 Sum_probs=172.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCC------ceEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT------NRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------~~~lV 499 (723)
..+.||+|+||.||+|.. +++.||||++... .....+++.+|++++++++||||+++++++.... ..++|
T Consensus 29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence 457899999999999998 4679999998653 3344567899999999999999999999997653 45999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHH----------HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWE----------GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~----------~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+ +++|.+++... .++.. ..+..+|+...+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 181 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--- 181 (367)
T ss_dssp EECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---
T ss_pred EecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc---
Confidence 9999 78999998753 23333 3344444444599999999999999999999999999875321
Q ss_pred ceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC-----------
Q 004935 570 THVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD----------- 637 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 637 (723)
.....+|+.|+|||.+.+ ..++.++||||+||+++||++|+.||........+...+...-....
T Consensus 182 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 258 (367)
T 1cm8_A 182 ---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258 (367)
T ss_dssp ---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHH
T ss_pred ---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHH
Confidence 234568999999999887 67999999999999999999999999765433222222221100000
Q ss_pred ------cccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 638 ------IESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 638 ------~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.......+. .........+.+++.+|++.||.+|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 259 KNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000000010 001112346789999999999999999999887
No 192
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.98 E-value=5.2e-33 Score=292.17 Aligned_cols=244 Identities=22% Similarity=0.373 Sum_probs=163.8
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||+++|
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 357899999999999987 57799999987543 334567899999999999999999999999999999999999999
Q ss_pred CHHHHhccC------CCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC--
Q 004935 507 NLQALLLGE------EADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS-- 568 (723)
Q Consensus 507 sL~~~l~~~------~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~-- 568 (723)
+|.+++... ....+++.....++.++ ..+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 178 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC------
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc
Confidence 999998641 22345555554444333 339999999999999999999999999986543221
Q ss_pred CceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC--Cc-ccccCC
Q 004935 569 GTHVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG--DI-ESIVDP 644 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~-~~i~d~ 644 (723)
.........+|+.|+|||.+.+ ..++.++||||||++++||++|+.||........... ..... .. ....++
T Consensus 179 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 254 (303)
T 2vwi_A 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML----TLQNDPPSLETGVQDK 254 (303)
T ss_dssp ---------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH----HHTSSCCCTTC-----
T ss_pred chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH----HhccCCCccccccccc
Confidence 0112234568999999999876 5689999999999999999999999976543322111 11111 01 111111
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...... ...+.+++.+|++.+|.+|||++|+++
T Consensus 255 ~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 255 EMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 221222 235789999999999999999999986
No 193
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.98 E-value=2.4e-32 Score=290.49 Aligned_cols=235 Identities=23% Similarity=0.389 Sum_probs=171.9
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEec------CCceEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDE------GTNRGLIY 500 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~------~~~~~lV~ 500 (723)
+.+.||+|+||.||+|.. +++.||||++..... ..+.+.+|+++++++ +||||+++++++.. .+..++||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~ 106 (326)
T 2x7f_A 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEE
Confidence 357899999999999998 577999999875432 346789999999999 89999999999976 46789999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc
Q 004935 501 EFMANGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 570 (723)
||+++|+|.+++.......++..... ..+|+...+||||||+|||++.++.+||+|||++.......
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--- 183 (326)
T 2x7f_A 107 EFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--- 183 (326)
T ss_dssp ECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC---------
T ss_pred EcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc---
Confidence 99999999999976533344443333 33344444999999999999999999999999998653221
Q ss_pred eeeecccCCCccccccccc-----cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCc
Q 004935 571 HVTTTIAGTPGYLDPEYYI-----SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPR 645 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~ 645 (723)
.......+++.|+|||.+. +..++.++|||||||+++||++|+.||......... ...... .......
T Consensus 184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~-~~~~~~~-- 256 (326)
T 2x7f_A 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRN-PAPRLKS-- 256 (326)
T ss_dssp -------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHS-CCCCCSC--
T ss_pred cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH----HHhhcC-ccccCCc--
Confidence 1223456899999999987 567899999999999999999999999755432111 111111 1111111
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 646 LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 646 l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.. ....+.+++.+||+.+|.+||+++++++
T Consensus 257 --~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 257 --KK----WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp --SC----SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --cc----cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11 1236789999999999999999999987
No 194
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=2.3e-32 Score=295.71 Aligned_cols=234 Identities=23% Similarity=0.381 Sum_probs=177.2
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCCh--------hhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEE
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA--------QGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV 499 (723)
.+.||+|+||.||+|.+ +++.||||++..... ...+.+.+|+.+++++ +||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 47899999999999998 477999999875431 1245688999999999 799999999999999999999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHHHHH----------hccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLRIAI----------EAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~----------~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+++|+|.+++.... .+++.....++. +...+||||||+|||++.++.+||+|||++..+....
T Consensus 179 ~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~-- 254 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE-- 254 (365)
T ss_dssp ECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--
T ss_pred EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc--
Confidence 99999999999987532 244444443333 3334999999999999999999999999998764322
Q ss_pred ceeeecccCCCcccccccccc------CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccC
Q 004935 570 THVTTTIAGTPGYLDPEYYIS------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d 643 (723)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ...... .+... ...
T Consensus 255 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~----~~~~i~-~~~~~-~~~ 326 (365)
T 2y7j_A 255 --KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL----MLRMIM-EGQYQ-FSS 326 (365)
T ss_dssp --CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHH-HTCCC-CCH
T ss_pred --ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH----HHHHHH-hCCCC-CCC
Confidence 2234679999999999863 358899999999999999999999997543221 111111 11110 000
Q ss_pred CcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 PRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.. .. ....+.+++.+|++.+|++|||++|+++
T Consensus 327 ~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 PEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000 11 1235789999999999999999999986
No 195
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=6.4e-33 Score=300.80 Aligned_cols=239 Identities=9% Similarity=-0.029 Sum_probs=161.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh---hhHHHHHHHHHHHHhc--cCCceeeEE-------EEEecC--
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA---QGYKQFQAEVELLMRI--HHKNLTTLV-------GYCDEG-- 493 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l--~H~nIv~l~-------g~~~~~-- 493 (723)
+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+++++.+ +||||++++ +++...
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTS
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCC
Confidence 457899999999999997 467999999987543 3445678886655555 599988855 444322
Q ss_pred ---------------CceEEEEEeCCCCCHHHHhccC----CCCC-----------CCHHHHHHHHHhccccccCCCCCC
Q 004935 494 ---------------TNRGLIYEFMANGNLQALLLGE----EADI-----------LSWEGRLRIAIEAAKVHRDVKSTN 543 (723)
Q Consensus 494 ---------------~~~~lV~Ey~~~gsL~~~l~~~----~~~~-----------l~~~~~l~i~~~~a~vH~Dlk~~N 543 (723)
...++|||||+ |+|.+++... .... .+....+..+|+...+||||||+|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~N 224 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDN 224 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHH
Confidence 33799999999 8999999753 1111 122223444444445999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCceeeecccCCCcccccccccc--CCCCChhhHHHHHHHHHHHHcCCCccccCcc
Q 004935 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYIS--NRLTEKSDVYNFGVVLLEIITSKSVIERTHE 621 (723)
Q Consensus 544 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DV~SfGvvL~elltg~~p~~~~~~ 621 (723)
||++.++.+||+|||+++... .......+|+.|+|||.+.+ ..++.++|||||||+|+||+||+.||.....
T Consensus 225 Ill~~~~~~kL~DFG~a~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 225 LFIMPDGRLMLGDVSALWKVG------TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp EEECTTSCEEECCGGGEEETT------CEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred EEECCCCCEEEEecceeeecC------CCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999998652 11224557799999999987 6799999999999999999999999976532
Q ss_pred cccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 622 RIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.... ..............+...........+.+++.+||+.+|++|||+.|+++
T Consensus 299 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKG------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTT------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccc------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2100 00000000000111111111122346789999999999999999999975
No 196
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.98 E-value=2.1e-32 Score=305.48 Aligned_cols=249 Identities=19% Similarity=0.266 Sum_probs=186.4
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccC-CceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH-KNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++...... .++..|+++++.++| +++..+..++...+..++||||+ ++
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~ 87 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GP 87 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CC
Confidence 457899999999999997 4779999998754432 358899999999976 56666777778888899999999 99
Q ss_pred CHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCCCc---
Q 004935 507 NLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGSGT--- 570 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~~~--- 570 (723)
+|.+++.... ..+++...+.++.+++ .|||||||+|||| +.++.+||+|||+++.........
T Consensus 88 sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (483)
T 3sv0_A 88 SLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIP 166 (483)
T ss_dssp BHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC
T ss_pred CHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccc
Confidence 9999997532 2355555555444443 3999999999999 688999999999998765432211
Q ss_pred -eeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHH--HHhcCCCcccccCCccc
Q 004935 571 -HVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVS--FMLGKGDIESIVDPRLH 647 (723)
Q Consensus 571 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~i~d~~l~ 647 (723)
.......||+.|+|||.+.+..++.++|||||||+||||++|+.||...........+.. .......+. .+.
T Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~ 241 (483)
T 3sv0_A 167 YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE-----ALC 241 (483)
T ss_dssp CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-----HHH
T ss_pred cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-----HHh
Confidence 112356799999999999999999999999999999999999999986543222111111 111000110 011
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 648 EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 648 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
... ...+.+++..||+.+|.+||++++|++.|++++....
T Consensus 242 ~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 242 RGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp TTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 111 2367899999999999999999999999999976543
No 197
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.98 E-value=5.4e-32 Score=292.75 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=179.8
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecC-----CceEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG-----TNRGLIY 500 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lV~ 500 (723)
.+.+.||+|+||.||+|.. ++..||||++.... ....+.+.+|++++++++||||+++++++... ...++|+
T Consensus 30 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~ 109 (364)
T 3qyz_A 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ 109 (364)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred EEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEE
Confidence 3467899999999999988 46689999997643 34457899999999999999999999999654 3679999
Q ss_pred EeCCCCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc
Q 004935 501 EFMANGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT 570 (723)
Q Consensus 501 Ey~~~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 570 (723)
||++ |+|.+++.... +++.... ..+|+...+||||||+|||++.++.+||+|||+++.........
T Consensus 110 e~~~-~~L~~~l~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 185 (364)
T 3qyz_A 110 DLME-TDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185 (364)
T ss_dssp ECCS-EEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred cccC-cCHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc
Confidence 9998 59999887542 4444333 33334444999999999999999999999999998764332222
Q ss_pred eeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcc---cccC---
Q 004935 571 HVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE---SIVD--- 643 (723)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~i~d--- 643 (723)
.......||+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+...+... ...... .+.+
T Consensus 186 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~ 264 (364)
T 3qyz_A 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL-GSPSQEDLNCIINLKA 264 (364)
T ss_dssp CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHH-CSCCHHHHHTCCCHHH
T ss_pred ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHh-CCCCHHHHHHhhhhhH
Confidence 22244579999999998764 458999999999999999999999997665444333332211 111000 0000
Q ss_pred ------CcccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 ------PRLHEDFD-----INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ------~~l~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..-..... ......+.+++.+|++.+|.+|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 112245789999999999999999999986
No 198
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.98 E-value=1.7e-32 Score=285.83 Aligned_cols=230 Identities=25% Similarity=0.324 Sum_probs=178.7
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|... +..||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 4578999999999999984 5689999986432 1224678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+|+|.+++.... .+++... +..+|+...+||||||+||+++.++.+||+|||++...... ...
T Consensus 98 ~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~ 170 (284)
T 2vgo_A 98 RGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRR 170 (284)
T ss_dssp TEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----CBC
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc-----ccc
Confidence 999999987542 2333333 33334444499999999999999999999999998765321 123
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINS 654 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 654 (723)
...+++.|+|||.+.+..++.++||||||++++||++|+.||...... ....... ... ..+....
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~-~~~------~~~~~~~---- 235 (284)
T 2vgo_A 171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT----ETHRRIV-NVD------LKFPPFL---- 235 (284)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHH-TTC------CCCCTTS----
T ss_pred cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh----HHHHHHh-ccc------cCCCCcC----
Confidence 456899999999999999999999999999999999999999754322 1111111 111 1111112
Q ss_pred HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 655 VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 655 ~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|.+|||++++++
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 235779999999999999999999986
No 199
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.98 E-value=9.6e-33 Score=293.72 Aligned_cols=246 Identities=21% Similarity=0.318 Sum_probs=172.7
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhh-HHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQG-YKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~-~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
+.+.||+|+||.||+|.. +++.||||++....... ...+.+|++++++++||||+++++++...+..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 357899999999999998 46799999997544322 1245689999999999999999999999999999999998 5
Q ss_pred CHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeecc
Q 004935 507 NLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTI 576 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 576 (723)
+|.+++..... .+++... +..+|+...+||||||+|||++.++.+||+|||+++..... .......
T Consensus 85 ~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~ 160 (324)
T 3mtl_A 85 DLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDNE 160 (324)
T ss_dssp EHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------------
T ss_pred CHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC---ccccccc
Confidence 89888875432 2443333 33344444499999999999999999999999999865322 1222345
Q ss_pred cCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC---cccccC---------
Q 004935 577 AGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD---IESIVD--------- 643 (723)
Q Consensus 577 ~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~i~d--------- 643 (723)
.+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+....+ ...... ......
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~ 239 (324)
T 3mtl_A 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR-ILGTPTEETWPGILSNEEFKTYNY 239 (324)
T ss_dssp --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-HHCCCCTTTSTTGGGCHHHHHTCC
T ss_pred cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhCCCChHhchhhhcchhhccccc
Confidence 68999999999876 5689999999999999999999999987654333332222 221111 010000
Q ss_pred CcccCC----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 PRLHED----FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~~l~~~----~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+..... ........+.+++.+|++.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 00012245679999999999999999999987
No 200
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=3.7e-32 Score=296.97 Aligned_cols=246 Identities=20% Similarity=0.246 Sum_probs=179.5
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhcc--------CCceeeEEEEEe----cC
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH--------HKNLTTLVGYCD----EG 493 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~--------H~nIv~l~g~~~----~~ 493 (723)
+.+.+.||+|+||.||+|+. +++.||||++... ....+.+.+|++++++++ |+||+++++++. ..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 34467899999999999987 4669999999754 344567899999999996 788999999987 56
Q ss_pred CceEEEEEeCCCCCHHHHhccCCCCCCCHHH----------HHHHHHhc-cccccCCCCCCEEEcCCC------------
Q 004935 494 TNRGLIYEFMANGNLQALLLGEEADILSWEG----------RLRIAIEA-AKVHRDVKSTNILLSGKF------------ 550 (723)
Q Consensus 494 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~-a~vH~Dlk~~NILl~~~~------------ 550 (723)
...++||||+ +|+|.+.+.......+++.. .+..+|+. ..+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~ 196 (397)
T 1wak_A 118 THICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196 (397)
T ss_dssp EEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC-
T ss_pred ceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHH
Confidence 6889999999 55666666544333344443 34455555 559999999999999775
Q ss_pred -------------------------------------cEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCC
Q 004935 551 -------------------------------------QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRL 593 (723)
Q Consensus 551 -------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 593 (723)
.+||+|||+++..... .....||+.|+|||.+.+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp --------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCGGGCCHHHHHTSCC
T ss_pred HhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------CccCCCCCcccCChhhcCCCC
Confidence 7999999999875322 234568999999999999999
Q ss_pred CChhhHHHHHHHHHHHHcCCCccccCccccc-----HHHHHHHHhcCC-------------------CcccccCCcc---
Q 004935 594 TEKSDVYNFGVVLLEIITSKSVIERTHERIH-----ITQWVSFMLGKG-------------------DIESIVDPRL--- 646 (723)
Q Consensus 594 ~~~~DV~SfGvvL~elltg~~p~~~~~~~~~-----~~~~~~~~~~~~-------------------~~~~i~d~~l--- 646 (723)
+.++|||||||+|+||+||+.||........ ....+....... ....+.+...
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 9999999999999999999999975432211 111111111110 0000000000
Q ss_pred ------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 647 ------HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 647 ------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+....+.+++.+||+.+|++|||++|+++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01224556678899999999999999999999985
No 201
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.98 E-value=4.1e-32 Score=294.46 Aligned_cols=243 Identities=22% Similarity=0.295 Sum_probs=169.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCC------ceEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT------NRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------~~~lV 499 (723)
+.+.||+|+||.||+|.. .++.||||++... .....+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence 357899999999999988 4679999999753 3344567899999999999999999999997654 67999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+++ +|.+.+... +++.. .+..+|+...+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~e~~~~-~l~~~~~~~----~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~--- 180 (371)
T 2xrw_A 109 MELMDA-NLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--- 180 (371)
T ss_dssp EECCSE-EHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred EEcCCC-CHHHHHhhc----cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccc---
Confidence 999985 788877543 33333 334444444499999999999999999999999999865321
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHH-----------------
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFM----------------- 632 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~----------------- 632 (723)
.......||+.|+|||.+.+..++.++|||||||+++||++|+.||........+...+...
T Consensus 181 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T 2xrw_A 181 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred -cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 12334578999999999999999999999999999999999999997654322111111100
Q ss_pred -hcC-CC-----cccccCCcccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 633 -LGK-GD-----IESIVDPRLHEDF---DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 633 -~~~-~~-----~~~i~d~~l~~~~---~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
... .. ............. .......+.+++.+|++.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000 00 0000000000000 1122557889999999999999999999987
No 202
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.98 E-value=1.1e-32 Score=300.26 Aligned_cols=244 Identities=17% Similarity=0.254 Sum_probs=173.8
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecC-------------
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG------------- 493 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------------- 493 (723)
.+.+.||+|+||.||+|.. +++.||||++..... ...+|++++++++||||+++++++...
T Consensus 10 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~ 85 (383)
T 3eb0_A 10 SLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDD 85 (383)
T ss_dssp EEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------------
T ss_pred EEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccc
Confidence 3467899999999999998 567999999875432 234799999999999999999998443
Q ss_pred -------------------------CceEEEEEeCCCCCHHHHhccC--CCCCCCHHHHH----------HHHHhccccc
Q 004935 494 -------------------------TNRGLIYEFMANGNLQALLLGE--EADILSWEGRL----------RIAIEAAKVH 536 (723)
Q Consensus 494 -------------------------~~~~lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~l----------~i~~~~a~vH 536 (723)
...++||||++ |+|.+.+... ....+++.... ..+|+...+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H 164 (383)
T 3eb0_A 86 HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICH 164 (383)
T ss_dssp ------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred cccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 33789999999 5888777531 22334444433 3334444499
Q ss_pred cCCCCCCEEEc-CCCcEEEEeccCccccCCCCCCceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCC
Q 004935 537 RDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKS 614 (723)
Q Consensus 537 ~Dlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~ 614 (723)
|||||+|||++ .++.+||+|||+++...... ......+|+.|+|||.+.+. .++.++||||+||+++||++|+.
T Consensus 165 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp SCCCGGGEEEETTTTEEEECCCTTCEECCTTS----CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CccCHHHEEEcCCCCcEEEEECCCCcccCCCC----CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999998 68899999999998764322 22345689999999998775 48999999999999999999999
Q ss_pred ccccCcccccHHHHHHHHhcCC---------CcccccCCc-----ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 004935 615 VIERTHERIHITQWVSFMLGKG---------DIESIVDPR-----LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVV 680 (723)
Q Consensus 615 p~~~~~~~~~~~~~~~~~~~~~---------~~~~i~d~~-----l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl 680 (723)
||........+.+.+...-... ...+..-+. +...........+.+++.+|++.+|.+|||+.|++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 9987654444444333211110 000000011 11111112234578999999999999999999998
Q ss_pred H
Q 004935 681 M 681 (723)
Q Consensus 681 ~ 681 (723)
+
T Consensus 321 ~ 321 (383)
T 3eb0_A 321 A 321 (383)
T ss_dssp T
T ss_pred c
Confidence 5
No 203
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=4.3e-32 Score=287.31 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=171.5
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEe--------------cC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD--------------EG 493 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--------------~~ 493 (723)
..+.||+|+||.||+|... ++.||||++........+++.+|++++++++||||+++++++. ..
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 3578999999999999984 6799999998777777788999999999999999999999873 34
Q ss_pred CceEEEEEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEc-CCCcEEEEeccCccc
Q 004935 494 TNRGLIYEFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRT 562 (723)
Q Consensus 494 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~-~~~~~kl~DfGla~~ 562 (723)
...++||||++ |+|.+++... .+.+... +..+|+...+||||||+|||++ +++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred CceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence 67889999998 6999998653 2333333 3334444449999999999997 567999999999987
Q ss_pred cCCCCCCceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC------
Q 004935 563 FPVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK------ 635 (723)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 635 (723)
...............++..|+|||.+.+ ..++.++|||||||+++||++|+.||...................
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
T 2i6l_A 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQ 250 (320)
T ss_dssp C--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHH
T ss_pred cCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhh
Confidence 6432221222334567899999998865 678999999999999999999999997654322222211110000
Q ss_pred ---CCcccccCCccc-CC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 636 ---GDIESIVDPRLH-ED-----FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 636 ---~~~~~i~d~~l~-~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+...+..... .. ........+.+++.+|++.+|++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 251 ELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000000000000 00 00112346789999999999999999999986
No 204
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=1.8e-32 Score=285.55 Aligned_cols=229 Identities=18% Similarity=0.267 Sum_probs=175.1
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
.+.+.||+|+||.||+|.. +++.||||++... ......++.+|+..+.++ +||||+++++++.+.+..++||||+
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 93 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 93 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEec
Confidence 3457899999999999998 4779999998764 234557789999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhccCC--CCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcC-------------------CCcE
Q 004935 504 ANGNLQALLLGEE--ADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSG-------------------KFQA 552 (723)
Q Consensus 504 ~~gsL~~~l~~~~--~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~-------------------~~~~ 552 (723)
++|+|.+++.... ...+++.....++.++ ..+||||||+|||++. ...+
T Consensus 94 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
T 1x8b_A 94 NGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF 173 (289)
T ss_dssp TTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCE
T ss_pred CCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence 9999999997531 1334544444444333 3399999999999984 4479
Q ss_pred EEEeccCccccCCCCCCceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHH
Q 004935 553 KIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631 (723)
Q Consensus 553 kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~ 631 (723)
||+|||++...... ....+|+.|+|||.+.+. .++.++|||||||+++||++|++++..... ..
T Consensus 174 kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~---- 238 (289)
T 1x8b_A 174 KIGDLGHVTRISSP-------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----WH---- 238 (289)
T ss_dssp EECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----HH----
T ss_pred EEcccccccccCCc-------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----HH----
Confidence 99999999875422 123589999999999766 567899999999999999999987643311 11
Q ss_pred HhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 632 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+..+.. +.+.... ...+.+++.+|++.+|++|||++|+++
T Consensus 239 ~~~~~~~-----~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 239 EIRQGRL-----PRIPQVL----SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHTTCC-----CCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCC-----CCCCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111111 1122222 236789999999999999999999875
No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.98 E-value=3.9e-32 Score=286.01 Aligned_cols=235 Identities=23% Similarity=0.298 Sum_probs=176.4
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC----hhhHHHHHHHHHHHHhccCCceeeEEEEE--ecCCceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS----AQGYKQFQAEVELLMRIHHKNLTTLVGYC--DEGTNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~--~~~~~~~lV~E 501 (723)
+.+.||+|+||.||++.. ++..||+|++.... ....+.+.+|++++++++|+||+++++++ .+....++|||
T Consensus 9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 457899999999999998 45699999987542 23457799999999999999999999998 44567899999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|++++ |.+++.......+++.....++.++ ..+||||||+||+++.++.+||+|||++........ ..
T Consensus 89 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~-~~ 166 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-DD 166 (305)
T ss_dssp CCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS-SC
T ss_pred hccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc-cc
Confidence 99987 7777765544455555554444333 339999999999999999999999999987643222 22
Q ss_pred eeecccCCCccccccccccCC--CCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNR--LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~--~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
......+++.|+|||.+.+.. .+.++||||||++++||++|+.||..... .+..... ..+.. .+...
T Consensus 167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~i-~~~~~------~~~~~ 235 (305)
T 2wtk_C 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI----YKLFENI-GKGSY------AIPGD 235 (305)
T ss_dssp EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHH-HHCCC------CCCSS
T ss_pred ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH----HHHHHHH-hcCCC------CCCCc
Confidence 334556899999999987644 47899999999999999999999975432 2222211 11111 11112
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
. ...+.+++.+|++.+|.+|||++|+++
T Consensus 236 ~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 236 C----GPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp S----CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred c----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2 235779999999999999999999986
No 206
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=2.4e-32 Score=290.20 Aligned_cols=239 Identities=21% Similarity=0.366 Sum_probs=176.0
Q ss_pred HHHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCCh--------hhHHHHHHHHHHHHhccCCceeeEEEEEecCCc
Q 004935 426 ITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA--------QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTN 495 (723)
Q Consensus 426 ~t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 495 (723)
..+.+.+.||+|+||.||+|.. +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 3455578999999999999998 456999999875421 12345889999999999999999999987655
Q ss_pred eEEEEEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCc---EEEEeccCccc
Q 004935 496 RGLIYEFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRT 562 (723)
Q Consensus 496 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~---~kl~DfGla~~ 562 (723)
.++||||+++|+|.+++.... .+++... +..+|+...+||||||+|||++.++. +||+|||+++.
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 899999999999999987542 2333333 33444444499999999999987654 99999999987
Q ss_pred cCCCCCCceeeecccCCCccccccccc---cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcc
Q 004935 563 FPVEGSGTHVTTTIAGTPGYLDPEYYI---SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE 639 (723)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 639 (723)
.... .......||+.|+|||.+. ...++.++|||||||+++||++|+.||........+...+... ...
T Consensus 167 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----~~~ 238 (322)
T 2ycf_A 167 LGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG----KYN 238 (322)
T ss_dssp CCCC----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHT----CCC
T ss_pred cccc----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhC----ccc
Confidence 5321 1223456899999999974 4678999999999999999999999997655443443332211 110
Q ss_pred cccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 640 SIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 640 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+..... ....+.+++.+|++.+|++|||+.++++
T Consensus 239 --~~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00111111 1236789999999999999999999985
No 207
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=2.5e-32 Score=288.86 Aligned_cols=234 Identities=21% Similarity=0.318 Sum_probs=176.0
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|... ++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 110 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCC
Confidence 4578999999999999984 6799999997643 24678999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 508 LQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
|.+++.... ..+++..... .+|+...+||||||+||+++.++.+||+|||++....... .......
T Consensus 111 L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~ 186 (314)
T 3com_A 111 VSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVI 186 (314)
T ss_dssp HHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB---SCBCCCC
T ss_pred HHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc---cccCccC
Confidence 999986321 2244444333 3334444999999999999999999999999998754321 1223456
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
+++.|+|||.+.+..++.++||||||++++||++|+.||....... ........ .. +.+. ........
T Consensus 187 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~-~~-----~~~~--~~~~~~~~ 254 (314)
T 3com_A 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR----AIFMIPTN-PP-----PTFR--KPELWSDN 254 (314)
T ss_dssp SCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHS-CC-----CCCS--SGGGSCHH
T ss_pred CCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHhcC-CC-----cccC--CcccCCHH
Confidence 8999999999999999999999999999999999999997543221 11111111 10 0110 01111236
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.+++.+|++.+|.+|||+.++++
T Consensus 255 l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 255 FTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHHh
Confidence 789999999999999999999986
No 208
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=5.6e-32 Score=283.79 Aligned_cols=235 Identities=22% Similarity=0.325 Sum_probs=178.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---------hhhHHHHHHHHHHHHhcc-CCceeeEEEEEecCCceE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---------AQGYKQFQAEVELLMRIH-HKNLTTLVGYCDEGTNRG 497 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---------~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~ 497 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++ ||||+++++++......+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 100 (298)
T 1phk_A 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100 (298)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEE
Confidence 357899999999999998 46799999997543 122456889999999995 999999999999999999
Q ss_pred EEEEeCCCCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 004935 498 LIYEFMANGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567 (723)
Q Consensus 498 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 567 (723)
+||||+++++|.+++.... .+++.....+ +|+...+||||||+||+++.++.+||+|||+++......
T Consensus 101 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 178 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178 (298)
T ss_dssp EEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred EEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCc
Confidence 9999999999999987532 2444433333 333344999999999999999999999999998764322
Q ss_pred CCceeeecccCCCccccccccc------cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccc
Q 004935 568 SGTHVTTTIAGTPGYLDPEYYI------SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 641 (723)
......+++.|+|||.+. ...++.++||||||++++||++|+.||...... ........ +... .
T Consensus 179 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~-~~~~-~ 248 (298)
T 1phk_A 179 ----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM----LMLRMIMS-GNYQ-F 248 (298)
T ss_dssp ----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHH-TCCC-C
T ss_pred ----ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH----HHHHHHhc-CCcc-c
Confidence 223456899999999885 456889999999999999999999999754322 11111111 1110 0
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+.. ......+.+++.+|++.+|.+|||+.|+++
T Consensus 249 ~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 249 GSPEW-----DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CTTTG-----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred Ccccc-----cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00111 122346789999999999999999999875
No 209
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=1.3e-31 Score=298.96 Aligned_cols=181 Identities=23% Similarity=0.374 Sum_probs=132.1
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEec-----CCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE-----GTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-----~~~~~lV 499 (723)
.+.+.||+|+||.||+|.. +++.||||++... .....+++.+|+++|++++||||+++++++.. ....++|
T Consensus 56 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 135 (458)
T 3rp9_A 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVV 135 (458)
T ss_dssp EECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEE
T ss_pred EEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEE
Confidence 3467899999999999987 4679999998653 34456789999999999999999999999943 3568999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+. |+|.+++.... .+++.. .+..+|+...|||||||+||||+.++.+||+|||+++........
T Consensus 136 ~e~~~-~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~ 212 (458)
T 3rp9_A 136 LEIAD-SDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENG 212 (458)
T ss_dssp ECCCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTC
T ss_pred Eeccc-cchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcccc
Confidence 99985 68999887542 233333 344444444599999999999999999999999999876432211
Q ss_pred c------------------------eeeecccCCCcccccccc-ccCCCCChhhHHHHHHHHHHHHcC
Q 004935 570 T------------------------HVTTTIAGTPGYLDPEYY-ISNRLTEKSDVYNFGVVLLEIITS 612 (723)
Q Consensus 570 ~------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~SfGvvL~elltg 612 (723)
. .......||+.|+|||.+ ....++.++|||||||+|+||++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 0 122345689999999986 456799999999999999999993
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=3.8e-32 Score=306.07 Aligned_cols=237 Identities=23% Similarity=0.326 Sum_probs=174.9
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.+.+.||+|+||.||+|.. .+..||||++.... ......+.+|++++++++||||++++++|......++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 344568899999999999998 46699999987643 23356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCC---CcEEEEeccCccccCCCCCC
Q 004935 503 MANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGK---FQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~---~~~kl~DfGla~~~~~~~~~ 569 (723)
+++|+|.+++.... .+++.. .+..+|+...+||||||+|||++.. +.+||+|||+++.....
T Consensus 118 ~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~--- 192 (494)
T 3lij_A 118 YKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--- 192 (494)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT---
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC---
Confidence 99999998876532 133332 3334444444999999999999764 55999999999876432
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
.......||+.|+|||.+. ..++.++||||+||++|||++|+.||....... ....... +.. ....+.+ ..
T Consensus 193 -~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~-~~~-~~~~~~~-~~ 263 (494)
T 3lij_A 193 -KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE----ILRKVEK-GKY-TFDSPEW-KN 263 (494)
T ss_dssp -BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHH-TCC-CCCSGGG-TT
T ss_pred -ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHh-CCC-CCCchhc-cc
Confidence 2234457999999999876 569999999999999999999999997654321 1221111 111 0001111 11
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
....+.+++.+|++.+|.+|||++|+++
T Consensus 264 ----~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 264 ----VSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1235779999999999999999999986
No 211
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=1.5e-32 Score=302.73 Aligned_cols=243 Identities=19% Similarity=0.274 Sum_probs=172.2
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecC------CceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG------TNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------~~~~lV~E 501 (723)
..+.||+|+||.||+|++ +++.||||++..... .+.+|+++|++++|+||++++++|... ...++|||
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 357899999999999999 467999999865432 235799999999999999999998442 23678999
Q ss_pred eCCCCCHHHHhcc--CCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCC-CcEEEEeccCccccCCCCC
Q 004935 502 FMANGNLQALLLG--EEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGK-FQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 502 y~~~gsL~~~l~~--~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~-~~~kl~DfGla~~~~~~~~ 568 (723)
|+++ +|.+.+.. .....+.+... +..+|+...+||||||+|||++.+ +.+||+|||+++.+....
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~- 211 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE- 211 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-
Confidence 9986 56655542 12233444433 344444444999999999999965 678999999998764322
Q ss_pred CceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC---------CCc
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK---------GDI 638 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~~~ 638 (723)
......+|+.|+|||.+.+. .++.++|||||||+|+||++|+.||........+.++++..-.. ...
T Consensus 212 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 212 ---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp ---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred ---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 12345689999999998765 79999999999999999999999998765444444433321110 011
Q ss_pred ccccCCcccC-----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 639 ESIVDPRLHE-----DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 639 ~~i~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+...+.+.. .+.......+.+++.+||+.+|.+|||+.|+++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1111111110 011122346789999999999999999999985
No 212
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97 E-value=4.5e-32 Score=281.24 Aligned_cols=231 Identities=24% Similarity=0.346 Sum_probs=170.5
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 357899999999999998 47799999986532 1234678999999999999999999999999999999999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+++.....+ +|+...+||||||+||+++.++.+||+|||++...... ....
T Consensus 95 ~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~----~~~~ 168 (276)
T 2h6d_A 95 GGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLR 168 (276)
T ss_dssp SCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------
T ss_pred CCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC----ccee
Confidence 999999986542 2344433333 33333499999999999999999999999999875322 1223
Q ss_pred cccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 575 TIAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
...+++.|+|||.+.+..+ +.++||||||++++||++|+.||..... ........ .+. ..+....
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~~------~~~~~~~--- 234 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV----PTLFKKIR-GGV------FYIPEYL--- 234 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHH-HCC------CCCCTTS---
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHhh-cCc------ccCchhc---
Confidence 4568999999999987765 6899999999999999999999975432 12122111 111 0111111
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+.+++.+|++.+|.+|||++|+++
T Consensus 235 -~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 235 -NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 235779999999999999999999987
No 213
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=9.8e-32 Score=286.81 Aligned_cols=244 Identities=18% Similarity=0.262 Sum_probs=181.9
Q ss_pred HhhhhccccCcEEEEEEEE---CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCc------eeeEEEEEecCCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL---DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN------LTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~g~~~~~~~~~lV 499 (723)
.+.+.||+|+||.||+|.. +++.||||++... ....+.+.+|++++++++|++ ++++++++...+..++|
T Consensus 17 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv 95 (339)
T 1z57_A 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIV 95 (339)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEE
Confidence 4467899999999999987 4668999999754 334567899999999997665 99999999999999999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcC-------------------CC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSG-------------------KF 550 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~-------------------~~ 550 (723)
|||+ +++|.+++.......+++.....++.+ ...+||||||+|||++. ++
T Consensus 96 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~ 174 (339)
T 1z57_A 96 FELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP 174 (339)
T ss_dssp EECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCC
T ss_pred EcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCC
Confidence 9999 889999998765444555544444333 33399999999999987 66
Q ss_pred cEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHH
Q 004935 551 QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVS 630 (723)
Q Consensus 551 ~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~ 630 (723)
.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||+++||++|+.||........... +.
T Consensus 175 ~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~-~~ 247 (339)
T 1z57_A 175 DIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM-ME 247 (339)
T ss_dssp CEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH-HH
T ss_pred CceEeeCcccccCccc------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HH
Confidence 8999999999864321 2345789999999999999999999999999999999999999976543322222 11
Q ss_pred HHhcCCC--------ccccc-C-------------------Cccc--CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 004935 631 FMLGKGD--------IESIV-D-------------------PRLH--EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVV 680 (723)
Q Consensus 631 ~~~~~~~--------~~~i~-d-------------------~~l~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl 680 (723)
.....-. ..... . ..+. ..........+.+++.+|++.||.+|||++|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 1111100 00000 0 0000 011223456788999999999999999999987
Q ss_pred H
Q 004935 681 M 681 (723)
Q Consensus 681 ~ 681 (723)
+
T Consensus 328 ~ 328 (339)
T 1z57_A 328 K 328 (339)
T ss_dssp T
T ss_pred c
Confidence 5
No 214
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=8.4e-33 Score=296.88 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=183.0
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCChh-----------------hHHHHHHHHHHHHhccCCceeeEEEEEec
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQ-----------------GYKQFQAEVELLMRIHHKNLTTLVGYCDE 492 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~-----------------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~ 492 (723)
+.+.||+|+||.||+|..+++.||||++...... ..+.|.+|++++++++||||+++++++..
T Consensus 35 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 4578999999999999998889999998643211 12789999999999999999999999999
Q ss_pred CCceEEEEEeCCCCCHHHH------hccCCCCCCCHHHHHH----------HHHh-ccccccCCCCCCEEEcCCCcEEEE
Q 004935 493 GTNRGLIYEFMANGNLQAL------LLGEEADILSWEGRLR----------IAIE-AAKVHRDVKSTNILLSGKFQAKIA 555 (723)
Q Consensus 493 ~~~~~lV~Ey~~~gsL~~~------l~~~~~~~l~~~~~l~----------i~~~-~a~vH~Dlk~~NILl~~~~~~kl~ 555 (723)
.+..++||||+++|+|.++ +.......+++..... .+|+ ...+||||||+||+++.++.+||+
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~ 194 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLS 194 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEEC
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEe
Confidence 9999999999999999998 5543344555555444 3444 445999999999999999999999
Q ss_pred eccCccccCCCCCCceeeecccCCCccccccccccC-CCCC-hhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHh
Q 004935 556 DFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN-RLTE-KSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFML 633 (723)
Q Consensus 556 DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~ 633 (723)
|||+++..... ......++..|+|||.+.+. .++. ++|||||||+++||++|+.||..........+ ..
T Consensus 195 dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~i- 265 (348)
T 2pml_X 195 DFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN---NI- 265 (348)
T ss_dssp CCTTCEECBTT-----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHH---HH-
T ss_pred ccccccccccc-----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH---HH-
Confidence 99999875322 33456789999999999877 6666 99999999999999999999976544222222 11
Q ss_pred cCCCccccc------CCccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 634 GKGDIESIV------DPRLH---EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 634 ~~~~~~~i~------d~~l~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+...... .+... ..........+.+++.+|++.+|.+|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111000 00000 0000122346789999999999999999999987
No 215
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=2.2e-32 Score=307.33 Aligned_cols=237 Identities=25% Similarity=0.332 Sum_probs=180.9
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
.+.+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 445568999999999999998 46799999986542 3346789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEE---cCCCcEEEEeccCccccCCCCC
Q 004935 502 FMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILL---SGKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~~~ 568 (723)
|+++|+|.+++..... +++... +..+|+...+||||||+|||+ +.++.+||+|||+++......
T Consensus 107 ~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 183 (484)
T 3nyv_A 107 VYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK- 183 (484)
T ss_dssp CCCSCBHHHHHHTCSC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-
T ss_pred cCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-
Confidence 9999999998875432 333333 333444444999999999999 567899999999998764321
Q ss_pred CceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
......||+.|+|||.+.+ .++.++||||+||++|||++|+.||........ ..... .+... .-.+..
T Consensus 184 ---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~-~~~~~-~~~~~~-- 251 (484)
T 3nyv_A 184 ---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----LKKVE-KGKYT-FELPQW-- 251 (484)
T ss_dssp ---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHH-HCCCC-CCSGGG--
T ss_pred ---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHH-cCCCC-CCCccc--
Confidence 2234569999999999866 699999999999999999999999976543221 11111 11110 000111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+.+++.+|++.+|.+|||++|+++
T Consensus 252 ---~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 252 ---KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ---GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 112235779999999999999999999886
No 216
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=4.8e-32 Score=304.69 Aligned_cols=238 Identities=25% Similarity=0.314 Sum_probs=178.3
Q ss_pred HHHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 426 ITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 426 ~t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
..+.+.+.||+|+||.||+|.. +++.||||++.... ......+.+|++++++++||||+++++++......++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 3455678999999999999998 46799999986432 2235678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEc---CCCcEEEEeccCccccCCCCC
Q 004935 502 FMANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLS---GKFQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~---~~~~~kl~DfGla~~~~~~~~ 568 (723)
|+++|+|.+.+.... .+++.. .+..+|+...+||||||+|||++ .++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-- 177 (486)
T 3mwu_A 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-- 177 (486)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC--
Confidence 999999998886532 233333 33344444449999999999995 4567999999999875422
Q ss_pred CceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
.......||+.|+|||.+.+ .++.++||||+||++|||++|+.||........ ..... .+.... -.+.. .
T Consensus 178 --~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~-~~~~~~-~~~~~-~ 247 (486)
T 3mwu_A 178 --TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI----LKRVE-TGKYAF-DLPQW-R 247 (486)
T ss_dssp ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHH-HTCCCS-CSGGG-G
T ss_pred --CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHH-hCCCCC-CCccc-C
Confidence 22334579999999999875 599999999999999999999999976543221 11111 111100 00111 1
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+.+++.+||+.+|.+|||+.|+++
T Consensus 248 ----~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 248 ----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ----GSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 12235779999999999999999999987
No 217
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=9.9e-32 Score=297.42 Aligned_cols=185 Identities=24% Similarity=0.358 Sum_probs=143.7
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecC-----CceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG-----TNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lV 499 (723)
.+.+.||+|+||.||+|.. +++.||||++... .....+++.+|+++|++++|+||+++++++... ...++|
T Consensus 29 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv 108 (432)
T 3n9x_A 29 IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIV 108 (432)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEE
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEE
Confidence 3467899999999999998 4668999999754 344567899999999999999999999999766 568999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||++ |+|.+++.... .+++... +..+|+...+||||||+|||++.++.+||+|||+++........
T Consensus 109 ~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 185 (432)
T 3n9x_A 109 LEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185 (432)
T ss_dssp EECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC------
T ss_pred EecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccc
Confidence 99997 59999987642 2444433 33444444499999999999999999999999999876432211
Q ss_pred c-------------------eeeecccCCCcccccccc-ccCCCCChhhHHHHHHHHHHHHcCCCcc
Q 004935 570 T-------------------HVTTTIAGTPGYLDPEYY-ISNRLTEKSDVYNFGVVLLEIITSKSVI 616 (723)
Q Consensus 570 ~-------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DV~SfGvvL~elltg~~p~ 616 (723)
. .......||+.|+|||.+ ....++.++|||||||+++||++|..|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 0 123456789999999986 5667999999999999999999865544
No 218
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=2.7e-32 Score=284.92 Aligned_cols=235 Identities=21% Similarity=0.259 Sum_probs=163.3
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHH-HHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCC
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYK-QFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMAN 505 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~-~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~ 505 (723)
+.+.||+|+||.||+|.. +++.||||++.... ..... .+.++...++.++||||+++++++...+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 357899999999999998 67799999997653 22233 34555556888899999999999999999999999998
Q ss_pred CCHHHHhccC--CCCCCCHHHH----------HHHHHhc-cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 506 GNLQALLLGE--EADILSWEGR----------LRIAIEA-AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 506 gsL~~~l~~~--~~~~l~~~~~----------l~i~~~~-a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
|+|.+++... ....+++... +..+|+. ..+||||||+||+++.++.+||+|||+++..... ..
T Consensus 90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 165 (290)
T 3fme_A 90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD----VA 165 (290)
T ss_dssp EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------
T ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc----cc
Confidence 4888777542 2233444443 3444444 5599999999999999999999999999875432 12
Q ss_pred eecccCCCcccccccc----ccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 573 TTTIAGTPGYLDPEYY----ISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~----~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
.....+|+.|+|||.+ .+..++.++|||||||+++||+||+.||...... ............ +....
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~------~~~~~ 236 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLKQVVEEPS------PQLPA 236 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH---HHHHHHHHHSCC------CCCCT
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch---HHHHHHHhccCC------CCccc
Confidence 2334689999999996 4567899999999999999999999999753321 111222222211 11111
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+.+++.+|++.+|++|||++|+++
T Consensus 237 ---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 237 ---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111235789999999999999999999987
No 219
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=1.1e-31 Score=288.82 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=177.0
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCCh--hhHHHHHHHHHHHHhccCCceeeEEEEEec--------CCceE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA--QGYKQFQAEVELLMRIHHKNLTTLVGYCDE--------GTNRG 497 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~--------~~~~~ 497 (723)
+.+.||+|+||.||+|.. +++.||||++..... .....+.+|++++++++||||+++++++.. .+..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 457899999999999998 467999999865432 234578899999999999999999999977 34688
Q ss_pred EEEEeCCCCCHHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 004935 498 LIYEFMANGNLQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567 (723)
Q Consensus 498 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 567 (723)
+||||+++ +|.+.+..... .+++.....++ |+...+||||||+|||++.++.+||+|||+++......
T Consensus 101 lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 178 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178 (351)
T ss_dssp EEEECCSE-EHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCS
T ss_pred EEEeccCC-CHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccc
Confidence 99999985 77777655322 24444443333 33334999999999999999999999999998764322
Q ss_pred C-CceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC---ccccc
Q 004935 568 S-GTHVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD---IESIV 642 (723)
Q Consensus 568 ~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~i~ 642 (723)
. .........||+.|+|||.+.+ ..++.++|||||||+++||+||+.||........+... ........ ....-
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~~ 257 (351)
T 3mi9_A 179 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI-SQLCGSITPEVWPNVD 257 (351)
T ss_dssp SSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHHHCCCCTTTSTTGG
T ss_pred cccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHhCCCChhhccccc
Confidence 1 1122344578999999999876 45899999999999999999999999876543332222 22211110 00000
Q ss_pred CCccc--------CCCCH-HH------HHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 643 DPRLH--------EDFDI-NS------VWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 643 d~~l~--------~~~~~-~~------~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
...+. ..... +. ...+.+++.+|++.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp GCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00000 00001 11 234779999999999999999999887
No 220
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=2.5e-32 Score=292.38 Aligned_cols=234 Identities=21% Similarity=0.289 Sum_probs=174.8
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCC-hhhHHHHHHHHHH-HHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS-AQGYKQFQAEVEL-LMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~-~~~~~~f~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.||+|+||.||+|.. +++.||||++.... .....++..|+.+ ++.++||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 46899999999999998 57799999997653 3344566666665 7778999999999999999999999999985
Q ss_pred CHHHHhccC--CCCCCCHHHHH----------HHHHhc-cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 507 NLQALLLGE--EADILSWEGRL----------RIAIEA-AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 507 sL~~~l~~~--~~~~l~~~~~l----------~i~~~~-a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
+|.+++... ....+++.... ..+|+. ..+||||||+|||++.++.+||+|||+++.... ....
T Consensus 135 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~----~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----SVAK 210 (340)
T ss_dssp EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC----HHHH
T ss_pred cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccc----cccc
Confidence 998887642 23345554443 334433 459999999999999999999999999987532 1122
Q ss_pred ecccCCCccccccccc----cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 574 TTIAGTPGYLDPEYYI----SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~----~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
....||+.|+|||.+. ...++.++|||||||++|||+||+.||...... ...+........ +.+..
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~------~~~~~- 280 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLKQVVEEPS------PQLPA- 280 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH---HHHHHHHHHSCC------CCCCG-
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch---HHHHHHHhcCCC------CCCCc-
Confidence 3357999999999964 347899999999999999999999999754321 111222222111 11111
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+.+++.+||+.+|++|||++|+++
T Consensus 281 --~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 281 --DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 112346789999999999999999999987
No 221
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=5.4e-32 Score=287.73 Aligned_cols=247 Identities=22% Similarity=0.331 Sum_probs=178.9
Q ss_pred hhhhccccCcEEEEEEEE---CCceEEEEEecCCC--hhhHHHHHHHHHHHHhc---cCCceeeEEEEEe-----cCCce
Q 004935 430 FERVLGNGGFGTVYHGYL---DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRI---HHKNLTTLVGYCD-----EGTNR 496 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~---~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l---~H~nIv~l~g~~~-----~~~~~ 496 (723)
+.+.||+|+||.||+|.. +++.||||++.... ......+.+|+.+++++ +||||++++++|. .....
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 457899999999999998 35689999986432 11223566788777766 8999999999987 55678
Q ss_pred EEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 004935 497 GLIYEFMANGNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVE 566 (723)
Q Consensus 497 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 566 (723)
++||||++ |+|.+++.......+++.....++.++ ..+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ 173 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG
T ss_pred EEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCC
Confidence 99999998 699999987654446665554444443 3399999999999999999999999999865321
Q ss_pred CCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC--ccc-ccC
Q 004935 567 GSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD--IES-IVD 643 (723)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-i~d 643 (723)
.......+++.|+|||.+.+..++.++|||||||+++||++|+.||........+...+........ ... ...
T Consensus 174 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (326)
T 1blx_A 174 ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249 (326)
T ss_dssp ----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred ----CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcccccc
Confidence 1223456899999999999999999999999999999999999999866543333332222111100 000 000
Q ss_pred Cc--c-------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 644 PR--L-------HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 644 ~~--l-------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
++ + ...........+.+++.+|++.+|.+|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0 00111122346779999999999999999999985
No 222
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=8e-32 Score=295.74 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=160.4
Q ss_pred hhhccccCcEEEEEEEEC----CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEe--cCCceEEEEEeCC
Q 004935 431 ERVLGNGGFGTVYHGYLD----GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCD--EGTNRGLIYEFMA 504 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~----~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~~lV~Ey~~ 504 (723)
.++||+|+||.||+|... +..||||++..... ...+.+|+++|++++||||+++++++. .....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 357999999999999963 56899999975532 246889999999999999999999994 4678899999998
Q ss_pred CCCHHHHhccC-------CCCCCCHHHHH----------HHHHhccccccCCCCCCEEE----cCCCcEEEEeccCcccc
Q 004935 505 NGNLQALLLGE-------EADILSWEGRL----------RIAIEAAKVHRDVKSTNILL----SGKFQAKIADFGLSRTF 563 (723)
Q Consensus 505 ~gsL~~~l~~~-------~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl----~~~~~~kl~DfGla~~~ 563 (723)
+ +|.+++... ....+++.... ..+|+...+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 182 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence 5 787776521 11124444433 33344444999999999999 67889999999999876
Q ss_pred CCCCCCceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCccc---------ccHHHHHHHHh
Q 004935 564 PVEGSGTHVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHER---------IHITQWVSFML 633 (723)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~---------~~~~~~~~~~~ 633 (723)
..............||+.|+|||.+.+. .++.++|||||||+++||++|+.||...... ..+...+. .+
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~-~~ 261 (405)
T 3rgf_A 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN-VM 261 (405)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH-HH
T ss_pred CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH-hh
Confidence 4322222233456789999999998874 5899999999999999999999999654321 11112111 11
Q ss_pred cCCC---cccccC------------CcccCCCC---------HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 634 GKGD---IESIVD------------PRLHEDFD---------INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 634 ~~~~---~~~i~d------------~~l~~~~~---------~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.... ...+.. ........ ......+.+++.+||+.||.+|||++|+++
T Consensus 262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1110 000000 00000000 001235779999999999999999999987
No 223
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=2.6e-32 Score=294.88 Aligned_cols=244 Identities=22% Similarity=0.295 Sum_probs=168.5
Q ss_pred hhhccccCcEEEEEEEE-CCceEEEEEecCCC-----------hhhHHHHHHHHHHHHhccCCceeeEEEEEec-----C
Q 004935 431 ERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSS-----------AQGYKQFQAEVELLMRIHHKNLTTLVGYCDE-----G 493 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~-----------~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-----~ 493 (723)
.+.||+|+||.||+|.. ++..||||++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 57899999999999987 56699999986432 1224789999999999999999999999843 3
Q ss_pred CceEEEEEeCCCCCHHHHhccCCCCCCCHHHHHHHH----------HhccccccCCCCCCEEEcCCCcEEEEeccCcccc
Q 004935 494 TNRGLIYEFMANGNLQALLLGEEADILSWEGRLRIA----------IEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF 563 (723)
Q Consensus 494 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~----------~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~ 563 (723)
...++||||++ |+|.+++.... ..+++.....++ |+...+||||||+|||++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC----
T ss_pred ceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccc
Confidence 45799999998 68888876542 234544443333 3333499999999999999999999999999754
Q ss_pred CCCCCCceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcc---
Q 004935 564 PVEGSGTHVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIE--- 639 (723)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 639 (723)
... .......+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+...+.. .......
T Consensus 185 ~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~ 259 (362)
T 3pg1_A 185 TAD----ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV-VGTPKIEDVV 259 (362)
T ss_dssp ---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCCCHHHHH
T ss_pred ccc----cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-cCCCChHHhh
Confidence 322 22334568999999999876 67899999999999999999999999765433222222221 1111100
Q ss_pred --------cccCCccc-------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 640 --------SIVDPRLH-------EDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 640 --------~i~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.+...+. ..........+.+++.+|++.+|++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00000000 0001112345789999999999999999999986
No 224
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=1.2e-32 Score=291.94 Aligned_cols=247 Identities=21% Similarity=0.320 Sum_probs=176.7
Q ss_pred hhhhccccCcEEEEEEEECCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 430 FERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+.||+|+||.||+|...+ .||+|++.... ....+.|.+|+.++++++|+||+++++++...+..++|+||+++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred EeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 35789999999999999865 59999987542 2233568899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCC--Cceeeec
Q 004935 508 LQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGS--GTHVTTT 575 (723)
Q Consensus 508 L~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~--~~~~~~~ 575 (723)
|.+++.... ..+++...+. .+|+...+||||||+|||++ ++.+||+|||+++....... .......
T Consensus 116 L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 193 (319)
T 2y4i_B 116 LYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRI 193 (319)
T ss_dssp HHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBC
T ss_pred HHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccccccccc
Confidence 999997643 2234333333 33344449999999999998 67999999999876532111 1112233
Q ss_pred ccCCCcccccccccc---------CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcc
Q 004935 576 IAGTPGYLDPEYYIS---------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRL 646 (723)
Q Consensus 576 ~~gt~~y~aPE~~~~---------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l 646 (723)
..|++.|+|||.+.+ ..++.++|||||||+++||++|+.||...... ...... ..+.........+
T Consensus 194 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~-~~~~~~~~~~~~~ 268 (319)
T 2y4i_B 194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE----AIIWQM-GTGMKPNLSQIGM 268 (319)
T ss_dssp CSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----HHHHHH-HTTCCCCCCCSSC
T ss_pred CCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHh-ccCCCCCCCcCCC
Confidence 468999999999864 35788999999999999999999999754322 111111 1111111111111
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHhh
Q 004935 647 HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLAIETA 692 (723)
Q Consensus 647 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~~ 692 (723)
...+.+++.+|++.+|.+|||++++++.|+++......
T Consensus 269 --------~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 269 --------GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --------CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --------CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 12467999999999999999999999999998866544
No 225
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=3.5e-32 Score=297.36 Aligned_cols=245 Identities=18% Similarity=0.260 Sum_probs=172.3
Q ss_pred HhhhhccccCcEEEEEEEE-CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCc------eEEEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTN------RGLIYE 501 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~------~~lV~E 501 (723)
.+.+.||+|+||.||+|+. .+..||+|++..... ...+|++++++++||||+++++++..... .++|||
T Consensus 43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e 118 (394)
T 4e7w_A 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118 (394)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence 3467899999999999998 455799998865432 22479999999999999999999855433 789999
Q ss_pred eCCCCCHHHHhcc-CCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEc-CCCcEEEEeccCccccCCCCCC
Q 004935 502 FMANGNLQALLLG-EEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 502 y~~~gsL~~~l~~-~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|++++.+...... .....+++.. .+..+|+...+||||||+|||++ .++.+||+|||+++......
T Consensus 119 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~-- 196 (394)
T 4e7w_A 119 YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-- 196 (394)
T ss_dssp CCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--
T ss_pred ccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC--
Confidence 9998655443321 1122333333 34444444459999999999999 79999999999998763322
Q ss_pred ceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcC-------------
Q 004935 570 THVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGK------------- 635 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~------------- 635 (723)
......+|+.|+|||.+.+. .++.++|||||||+++||++|+.||........+...++..-..
T Consensus 197 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 197 --PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp --CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred --CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 22345689999999998765 58999999999999999999999998765443443333321110
Q ss_pred -CCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 636 -GDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 636 -~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.....+....+...+.......+.+++.+||+.+|.+|||+.|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000000000000111112346889999999999999999999986
No 226
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=1.1e-31 Score=291.15 Aligned_cols=241 Identities=24% Similarity=0.307 Sum_probs=174.1
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCce------EEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNR------GLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~------~lV 499 (723)
+.+.||+|+||.||+|.. +++.||||++... .....+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 357899999999999988 4679999999764 333457889999999999999999999999877665 999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||++ |+|.+++... +++.... ..+|+...+||||||+|||++.++.+||+|||+++....
T Consensus 126 ~e~~~-~~l~~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~---- 196 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGME----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---- 196 (371)
T ss_dssp EECCC-EEHHHHTTSC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---------
T ss_pred Ecccc-ccHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc----
Confidence 99998 5888887543 4444333 333444449999999999999999999999999986532
Q ss_pred ceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC-c-ccc-----
Q 004935 570 THVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD-I-ESI----- 641 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~i----- 641 (723)
......+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+.......-.... . ..+
T Consensus 197 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 197 --EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred --CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 2234578999999999887 67999999999999999999999999765433333222221111000 0 000
Q ss_pred ------cCCcccCC---CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 642 ------VDPRLHED---FDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 642 ------~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+....... ........+.+++.+|++.+|++|||++|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000000 00112346789999999999999999999886
No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=4.6e-32 Score=293.37 Aligned_cols=241 Identities=23% Similarity=0.334 Sum_probs=160.4
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCC--ChhhHHHHHHHHHHHHhccCCceeeEEEEEecC------CceEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG------TNRGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------~~~~lV 499 (723)
+.+.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++||||+++++++... ...++|
T Consensus 33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence 357899999999999987 4679999998753 334567889999999999999999999998654 567999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
+||+ +++|.+++... .+++.... ..+|+...+||||||+|||++.++.+||+|||+++....
T Consensus 113 ~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~---- 184 (367)
T 2fst_X 113 THLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---- 184 (367)
T ss_dssp EECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------------
T ss_pred eccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc----
Confidence 9999 68998888653 34444433 334444449999999999999999999999999986532
Q ss_pred ceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC---cccccCC-
Q 004935 570 THVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD---IESIVDP- 644 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~i~d~- 644 (723)
......+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||.+......+....+. ..... +..+...
T Consensus 185 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~-~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 185 --EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKISSES 261 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCSCCHHHHTTCCCHH
T ss_pred --cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCCHHHHHHhhhHH
Confidence 1234578999999999877 67899999999999999999999999765443322222221 11110 0000000
Q ss_pred ------ccc--CCCCH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 645 ------RLH--EDFDI-----NSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 645 ------~l~--~~~~~-----~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+. ..... .....+.+++.+|++.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000 00010 11235789999999999999999999986
No 228
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=6.1e-32 Score=305.17 Aligned_cols=234 Identities=24% Similarity=0.312 Sum_probs=174.6
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCCh-------------hhHHHHHHHHHHHHhccCCceeeEEEEEecCC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSA-------------QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT 494 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~-------------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~ 494 (723)
+.+.||+|+||.||+|... +..||||++..... ...+.+.+|+++|++++||||+++++++.+..
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 4578999999999999984 56899999875431 23467899999999999999999999999999
Q ss_pred ceEEEEEeCCCCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCC---cEEEEeccCcc
Q 004935 495 NRGLIYEFMANGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKF---QAKIADFGLSR 561 (723)
Q Consensus 495 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~---~~kl~DfGla~ 561 (723)
..++||||+++|+|.+++.... .+++.... ..+|+...+||||||+|||++.++ .+||+|||+++
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 197 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCE
T ss_pred EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCE
Confidence 9999999999999999886532 24444333 333333449999999999998775 69999999998
Q ss_pred ccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccc
Q 004935 562 TFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 641 (723)
..... .......||+.|+|||.+. ..++.++||||+||+++||++|+.||...... +...... .+...
T Consensus 198 ~~~~~----~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~-~~~~~-- 265 (504)
T 3q5i_A 198 FFSKD----YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ----DIIKKVE-KGKYY-- 265 (504)
T ss_dssp ECCTT----SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH-HCCCC--
T ss_pred EcCCC----CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-cCCCC--
Confidence 76432 1233457999999999876 46999999999999999999999999765432 2222211 11110
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+...... ....+.+++.+|++.+|.+|||++|+++
T Consensus 266 ~~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 266 FDFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000011 1235789999999999999999999985
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=1.4e-31 Score=281.01 Aligned_cols=238 Identities=24% Similarity=0.324 Sum_probs=168.7
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEec-------------C
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE-------------G 493 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-------------~ 493 (723)
.+.+.||+|+||.||+|.. +++.||||++... ....+.+.+|++++++++||||+++++++.+ .
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence 3457899999999999997 5679999998643 3445779999999999999999999998865 3
Q ss_pred CceEEEEEeCCCCCHHHHhccCCCCCCCHHH----------HHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCcccc
Q 004935 494 TNRGLIYEFMANGNLQALLLGEEADILSWEG----------RLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTF 563 (723)
Q Consensus 494 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~ 563 (723)
...++||||+++|+|.+++.... ..+++.. .+..+|+...+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 166 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCT
T ss_pred CceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhc
Confidence 56789999999999999997542 2233333 233344444499999999999999999999999999875
Q ss_pred CCCCC-----------CceeeecccCCCccccccccccC-CCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHH
Q 004935 564 PVEGS-----------GTHVTTTIAGTPGYLDPEYYISN-RLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSF 631 (723)
Q Consensus 564 ~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~ 631 (723)
..... .........+++.|+|||.+.+. .++.++|||||||+++||++ |+...... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~---~~~~~~ 240 (303)
T 1zy4_A 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER---VNILKK 240 (303)
T ss_dssp TC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HHHHHH
T ss_pred ccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---HHHHHh
Confidence 42210 01122345689999999998764 68999999999999999998 44322111 111111
Q ss_pred HhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 632 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.. ... ..+...........+.+++.+|++.+|.+|||++++++
T Consensus 241 ~~-~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 241 LR-SVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH-STT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cc-ccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11 111 11112222333446789999999999999999999986
No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1e-31 Score=285.89 Aligned_cols=237 Identities=20% Similarity=0.276 Sum_probs=156.0
Q ss_pred hhhccccCcEEEEEEEEC--CceEEEEEecCCC-hhhHHHHHHHHH-HHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 431 ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS-AQGYKQFQAEVE-LLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~f~~Ei~-~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.||+|+||.||+|... ++.||||++.... .....++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 568999999999999984 7799999997653 334456666766 67778999999999999999999999999985
Q ss_pred CHHHHhcc---CCCCCCCHHHHH----------HHHHhc-cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCcee
Q 004935 507 NLQALLLG---EEADILSWEGRL----------RIAIEA-AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 507 sL~~~l~~---~~~~~l~~~~~l----------~i~~~~-a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
+|.+++.. .....+++.... ..+++. ..+||||||+|||++.++.+||+|||+++...... .
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----~ 181 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----A 181 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc----c
Confidence 88777653 123334444433 334443 45999999999999999999999999998753221 2
Q ss_pred eecccCCCcccccccc----ccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 573 TTTIAGTPGYLDPEYY----ISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~----~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
.....||+.|+|||.+ .+..++.++|||||||+++||++|+.||....... +.... +.....+.+..
T Consensus 182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~------~~~~~~~~~~~ 252 (327)
T 3aln_A 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF---DQLTQ------VVKGDPPQLSN 252 (327)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------CC------CCCSCCCCCCC
T ss_pred cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH---HHHHH------HhcCCCCCCCC
Confidence 2334689999999998 45678999999999999999999999997543211 00000 00001111211
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.........+.+++.+||+.+|.+|||+.++++
T Consensus 253 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111122346789999999999999999999976
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=1.3e-31 Score=283.29 Aligned_cols=236 Identities=18% Similarity=0.300 Sum_probs=171.5
Q ss_pred hhhhccccCcEEEEEEEE-CCceEEEEEecCC--ChhhHHHHHHHHHHHHhcc--CCceeeEEEEEecCCceEEEEEeCC
Q 004935 430 FERVLGNGGFGTVYHGYL-DGTEVAVKMLSPS--SAQGYKQFQAEVELLMRIH--HKNLTTLVGYCDEGTNRGLIYEFMA 504 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~lV~Ey~~ 504 (723)
+.+.||+|+||.||++.. +++.||||++... .....+.+.+|++++++++ |+||+++++++...+..++||| +.
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 110 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 110 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cC
Confidence 357899999999999988 4668999998654 3445678999999999997 5999999999999999999999 67
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHH----------HHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 505 NGNLQALLLGEEADILSWEGRLRI----------AIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i----------~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
+++|.+++.... .+++.....+ +|+...+||||||+|||+++ +.+||+|||+++....... .....
T Consensus 111 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~-~~~~~ 186 (313)
T 3cek_A 111 NIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT-SVVKD 186 (313)
T ss_dssp SEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC------------
T ss_pred CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccc-ccccc
Confidence 889999997643 3444444333 33344499999999999975 7999999999987643221 12223
Q ss_pred cccCCCcccccccccc-----------CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccC
Q 004935 575 TIAGTPGYLDPEYYIS-----------NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVD 643 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~-----------~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d 643 (723)
...|++.|+|||.+.+ ..++.++|||||||+++||++|+.||...... ............
T Consensus 187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~------ 257 (313)
T 3cek_A 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHAIIDPNH------ 257 (313)
T ss_dssp ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHHHCTTS------
T ss_pred CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH---HHHHHHHHhccc------
Confidence 4568999999999875 46888999999999999999999999754322 112222222111
Q ss_pred CcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 004935 644 PRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVME 682 (723)
Q Consensus 644 ~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~ 682 (723)
...........+.+++.+||+.+|.+||+++|+++.
T Consensus 258 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 ---EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ---CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111112367899999999999999999999863
No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=9.3e-32 Score=290.12 Aligned_cols=245 Identities=18% Similarity=0.249 Sum_probs=163.3
Q ss_pred hhhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCc-------eEEEEE
Q 004935 431 ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTN-------RGLIYE 501 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~-------~~lV~E 501 (723)
.+.||+|+||.||+|... +..||||++..... ....+.+|++.+++++||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 578999999999999984 67999999865432 22456788899999999999999999865433 789999
Q ss_pred eCCCCCHHHHhcc--CCCCCCCHHH----------HHHHHH--hccccccCCCCCCEEEcC-CCcEEEEeccCccccCCC
Q 004935 502 FMANGNLQALLLG--EEADILSWEG----------RLRIAI--EAAKVHRDVKSTNILLSG-KFQAKIADFGLSRTFPVE 566 (723)
Q Consensus 502 y~~~gsL~~~l~~--~~~~~l~~~~----------~l~i~~--~~a~vH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~ 566 (723)
|+++ +|.+.+.. .....+.+.. .+..+| +...+||||||+|||++. ++.+||+|||+++.....
T Consensus 107 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~ 185 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185 (360)
T ss_dssp CCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTT
T ss_pred cccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCC
Confidence 9997 44443332 1222233222 233344 444499999999999997 899999999999876432
Q ss_pred CCCceeeecccCCCccccccccccCC-CCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC---------
Q 004935 567 GSGTHVTTTIAGTPGYLDPEYYISNR-LTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG--------- 636 (723)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 636 (723)
. ......||+.|+|||.+.+.. ++.++|||||||+++||++|+.||........+...++......
T Consensus 186 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3e3p_A 186 E----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNP 261 (360)
T ss_dssp S----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCT
T ss_pred C----CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhccc
Confidence 2 223456899999999987654 89999999999999999999999987654433333333211110
Q ss_pred --CcccccCC------cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 637 --DIESIVDP------RLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 637 --~~~~i~d~------~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+. .............+.+++.+||+.+|.+|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 262 SHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp TCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred chhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000 0001111223557889999999999999999999986
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=9.7e-32 Score=289.17 Aligned_cols=247 Identities=21% Similarity=0.343 Sum_probs=176.2
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC-hhhHHHHHHHHHHHHhccCCceeeEEEEEecC-----CceEEEEE
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS-AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEG-----TNRGLIYE 501 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lV~E 501 (723)
+.+.||+|+||.||+|... ++.||||++.... ......+.+|++++++++||||+++++++... ...++|+|
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEe
Confidence 3578999999999999984 7799999997543 34456789999999999999999999998654 67899999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHH----------HHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCce
Q 004935 502 FMANGNLQALLLGEEADILSWEGRL----------RIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l----------~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
|++ |+|.+++... .+++.... ..+|+...+||||||+|||++.++.+||+|||+++..........
T Consensus 95 ~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 170 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170 (353)
T ss_dssp CCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred ccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc
Confidence 998 5999988753 24444333 333444449999999999999999999999999987643221110
Q ss_pred -------eeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCC----cc
Q 004935 572 -------VTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGD----IE 639 (723)
Q Consensus 572 -------~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~ 639 (723)
......||+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+..... ...... ..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (353)
T 2b9h_A 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG-IIGTPHSDNDLR 249 (353)
T ss_dssp ---------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-HHCCCCSTTTTT
T ss_pred CccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH-HhCCCchhcccc
Confidence 1223468999999998764 6789999999999999999999999976543322222221 111110 00
Q ss_pred cccCCc-------cc--CCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 640 SIVDPR-------LH--EDF-----DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 640 ~i~d~~-------l~--~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+..+. +. ... .......+.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 00 000 0112346789999999999999999999886
No 234
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=7.1e-32 Score=313.88 Aligned_cols=227 Identities=23% Similarity=0.302 Sum_probs=176.1
Q ss_pred hhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeC
Q 004935 430 FERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
+.+.||+|+||.||+|... ++.||||+++... ....+.+..|.+++..+ +|++|+.+++++.+.+..++||||+
T Consensus 345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~ 424 (674)
T 3pfq_A 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 424 (674)
T ss_dssp EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECC
T ss_pred EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCc
Confidence 4578999999999999984 5689999987532 22345688999999988 7999999999999999999999999
Q ss_pred CCCCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceee
Q 004935 504 ANGNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVT 573 (723)
Q Consensus 504 ~~gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 573 (723)
++|+|.+++.... .+++... +..+|+...|||||||+||||+.++++||+|||+++...... ...
T Consensus 425 ~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---~~~ 499 (674)
T 3pfq_A 425 NGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTT 499 (674)
T ss_dssp CSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT---CCB
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC---ccc
Confidence 9999999997542 2333333 333344444999999999999999999999999998643222 223
Q ss_pred ecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHH
Q 004935 574 TTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDIN 653 (723)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 653 (723)
....||+.|+|||.+.+..++.++|||||||+||||++|+.||...... +........ . ..+...
T Consensus 500 ~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~~-~------~~~p~~---- 564 (674)
T 3pfq_A 500 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQSIMEH-N------VAYPKS---- 564 (674)
T ss_dssp CCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHSS-C------CCCCTT----
T ss_pred ccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH----HHHHHHHhC-C------CCCCcc----
Confidence 4567999999999999999999999999999999999999999765432 222222211 1 111112
Q ss_pred HHHHHHHHHHhccCCCCCCCCCH
Q 004935 654 SVWKTVEIAMACVSQTSTKRPTM 676 (723)
Q Consensus 654 ~~~~l~~l~~~Cl~~~p~~RPsm 676 (723)
....+.+++.+||+.+|++||++
T Consensus 565 ~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 565 MSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp SCHHHHHHHHHHSCSSSTTCTTC
T ss_pred CCHHHHHHHHHHccCCHHHCCCC
Confidence 22357899999999999999997
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=1.2e-31 Score=286.88 Aligned_cols=239 Identities=19% Similarity=0.229 Sum_probs=152.8
Q ss_pred hhccccCcEEEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhccCCceeeEEEEEec----CCceEEEEEeCCC
Q 004935 432 RVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE----GTNRGLIYEFMAN 505 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~~~ 505 (723)
++||+|+||.||+|... ++.||||++.... +........++.++|+||+++++++.. ....++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence 46999999999999984 7799999986532 122223334566799999999999876 4457899999999
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcC---CCcEEEEeccCccccCCCCCCcee
Q 004935 506 GNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSG---KFQAKIADFGLSRTFPVEGSGTHV 572 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~---~~~~kl~DfGla~~~~~~~~~~~~ 572 (723)
|+|.+++.......+++.....++.+++ .+||||||+|||++. ++.+||+|||+++..... .
T Consensus 111 g~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----~ 185 (336)
T 3fhr_A 111 GELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----A 185 (336)
T ss_dssp EEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-----c
Confidence 9999999876555566665555554443 399999999999986 455999999999865321 2
Q ss_pred eecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCH
Q 004935 573 TTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDI 652 (723)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~ 652 (723)
.....+|+.|+|||.+.+..++.++|||||||+++||++|+.||.............. ....+.. .+......
T Consensus 186 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~ 258 (336)
T 3fhr_A 186 LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR-RIRLGQY------GFPNPEWS 258 (336)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTTTST
T ss_pred cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH-hhhcccc------ccCchhhc
Confidence 2345689999999999888899999999999999999999999975433211111111 0000000 00000011
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHHHh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVM--ELNES 686 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~--~L~~~ 686 (723)
.....+.+++.+|++.+|.+|||++|+++ .+++.
T Consensus 259 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 12346789999999999999999999997 44443
No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=4.1e-31 Score=284.02 Aligned_cols=244 Identities=20% Similarity=0.266 Sum_probs=180.5
Q ss_pred HhhhhccccCcEEEEEEEEC--C-ceEEEEEecCCChhhHHHHHHHHHHHHhccCCc------eeeEEEEEecCCceEEE
Q 004935 429 NFERVLGNGGFGTVYHGYLD--G-TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN------LTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~--~-~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~g~~~~~~~~~lV 499 (723)
.+.+.||+|+||.||+|... + ..||||+++.. ....+.+.+|++++++++|++ ++.+++++...+..++|
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv 100 (355)
T 2eu9_A 22 EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIA 100 (355)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEE
Confidence 44678999999999999983 3 58999999754 334567889999999998766 99999999999999999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEE-------------------cCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILL-------------------SGKF 550 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl-------------------~~~~ 550 (723)
|||+ +++|.+++.......+++.....++.+++ .+||||||+|||+ +.++
T Consensus 101 ~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 179 (355)
T 2eu9_A 101 FELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179 (355)
T ss_dssp EECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCC
T ss_pred Eecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCC
Confidence 9999 66777777665444566655555444443 3999999999999 6788
Q ss_pred cEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHH
Q 004935 551 QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVS 630 (723)
Q Consensus 551 ~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~ 630 (723)
.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||+++||++|+.||........+... .
T Consensus 180 ~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~ 252 (355)
T 2eu9_A 180 SIRVADFGSATFDHEH------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM-E 252 (355)
T ss_dssp CEEECCCTTCEETTSC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-H
T ss_pred cEEEeecCcccccccc------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H
Confidence 9999999999864322 23457899999999999999999999999999999999999999765443222221 1
Q ss_pred HHhcCCC--------cccc-cCC-------------------cc--cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 004935 631 FMLGKGD--------IESI-VDP-------------------RL--HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVV 680 (723)
Q Consensus 631 ~~~~~~~--------~~~i-~d~-------------------~l--~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl 680 (723)
.....-. .... ... .+ ...........+.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 1111100 0000 000 00 0011223455788999999999999999999997
Q ss_pred H
Q 004935 681 M 681 (723)
Q Consensus 681 ~ 681 (723)
+
T Consensus 333 ~ 333 (355)
T 2eu9_A 333 L 333 (355)
T ss_dssp T
T ss_pred c
Confidence 5
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=285.16 Aligned_cols=240 Identities=23% Similarity=0.277 Sum_probs=173.4
Q ss_pred hhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCc------eEEE
Q 004935 430 FERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTN------RGLI 499 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~------~~lV 499 (723)
+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|+.++++++||||+++++++..... .++|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence 357899999999999998 47799999997643 3345678999999999999999999999987654 4999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHH----------HHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLR----------IAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~----------i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||++ |+|.+++... +++..... .+|+...+||||||+|||++.++.+||+|||+++....
T Consensus 108 ~e~~~-~~l~~~~~~~----~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~---- 178 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGLK----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---- 178 (353)
T ss_dssp EECCS-EEGGGTTTSC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred ecccc-CCHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC----
Confidence 99998 5888877542 44444333 33444449999999999999999999999999986432
Q ss_pred ceeeecccCCCcccccccccc-CCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCC------------
Q 004935 570 THVTTTIAGTPGYLDPEYYIS-NRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKG------------ 636 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------ 636 (723)
......+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||........+....+..-...
T Consensus 179 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 179 --EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred --CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 1234568999999999877 6789999999999999999999999976543322222222110000
Q ss_pred -----CcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 637 -----DIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 637 -----~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.+.....+.+. .........+.+++.+|++.+|++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000110 011122346789999999999999999999886
No 238
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=2.6e-31 Score=294.20 Aligned_cols=237 Identities=24% Similarity=0.322 Sum_probs=169.1
Q ss_pred hhhccccCcEEEEE-EEECCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 431 ERVLGNGGFGTVYH-GYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~-~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.+.||+|+||+||. +..+++.||||++... ..+.+.+|+++|+++ +||||+++++++...+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 46899999999964 4457889999998643 235678999999987 89999999999999999999999996 699
Q ss_pred HHHhccCCCC--C---------CCHHHH----HHHHHhccccccCCCCCCEEEcCC-------------CcEEEEeccCc
Q 004935 509 QALLLGEEAD--I---------LSWEGR----LRIAIEAAKVHRDVKSTNILLSGK-------------FQAKIADFGLS 560 (723)
Q Consensus 509 ~~~l~~~~~~--~---------l~~~~~----l~i~~~~a~vH~Dlk~~NILl~~~-------------~~~kl~DfGla 560 (723)
.+++...... . +.+..+ +..+|+...+||||||+|||++.+ +.+||+|||++
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a 175 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccc
Confidence 9999764211 1 113333 334444444999999999999754 48999999999
Q ss_pred cccCCCCCCc-eeeecccCCCcccccccccc-------CCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHH
Q 004935 561 RTFPVEGSGT-HVTTTIAGTPGYLDPEYYIS-------NRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSF 631 (723)
Q Consensus 561 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~ 631 (723)
+......... .......||+.|+|||.+.+ ..++.++|||||||+++||+| |+.||....... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~ 253 (434)
T 2rio_A 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRG 253 (434)
T ss_dssp EECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHT
T ss_pred eecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcC
Confidence 8764332111 11234579999999999865 568999999999999999999 999996543211 111111
Q ss_pred HhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 632 MLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 632 ~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.. .. +.+...........+.+++.+|++.+|.+|||+.||++
T Consensus 254 ~~---~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 254 IF---SL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp CC---CC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC---Cc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 11 11111123345567889999999999999999999985
No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=3.7e-31 Score=286.75 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=182.1
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHHHhcc-----------CCceeeEEEEEecCC-
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-----------HKNLTTLVGYCDEGT- 494 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-----------H~nIv~l~g~~~~~~- 494 (723)
.+.+.||+|+||.||+|.. +++.||||++... ....+.+.+|++++++++ |+||+++++++...+
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 100 (373)
T 1q8y_A 22 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGP 100 (373)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEET
T ss_pred EEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCC
Confidence 3467899999999999997 5679999999754 334567899999999886 899999999987644
Q ss_pred ---ceEEEEEeCCCCCHHHHhccCCCCCCCHHH----------HHHHHHhc-cccccCCCCCCEEEc------CCCcEEE
Q 004935 495 ---NRGLIYEFMANGNLQALLLGEEADILSWEG----------RLRIAIEA-AKVHRDVKSTNILLS------GKFQAKI 554 (723)
Q Consensus 495 ---~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~----------~l~i~~~~-a~vH~Dlk~~NILl~------~~~~~kl 554 (723)
..++||||+ +++|.+++.......+++.. .+..+|+. ..+||||||+|||++ ..+.+||
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl 179 (373)
T 1q8y_A 101 NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKI 179 (373)
T ss_dssp TEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEE
Confidence 788999999 88999999765444344433 34445554 569999999999994 4458999
Q ss_pred EeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCccc------ccHHHH
Q 004935 555 ADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHER------IHITQW 628 (723)
Q Consensus 555 ~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~------~~~~~~ 628 (723)
+|||+++..... .....+|+.|+|||.+.+..++.++|||||||+++||+||+.||...... ..+.+.
T Consensus 180 ~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (373)
T 1q8y_A 180 ADLGNACWYDEH------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253 (373)
T ss_dssp CCCTTCEETTBC------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHH
T ss_pred cccccccccCCC------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHH
Confidence 999999875322 23346899999999999999999999999999999999999999754321 111111
Q ss_pred HHHHhcCC-------------------CcccccCCcc---------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 004935 629 VSFMLGKG-------------------DIESIVDPRL---------HEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVV 680 (723)
Q Consensus 629 ~~~~~~~~-------------------~~~~i~d~~l---------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl 680 (723)
.. ....- ....+..... ...........+.+++.+||+.||++|||++|++
T Consensus 254 ~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 332 (373)
T 1q8y_A 254 IE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332 (373)
T ss_dssp HH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HH-hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHh
Confidence 11 11110 0000000000 0123455677889999999999999999999998
Q ss_pred H--HHHHhhhhH
Q 004935 681 M--ELNESLAIE 690 (723)
Q Consensus 681 ~--~L~~~~~~~ 690 (723)
+ .+++....+
T Consensus 333 ~hp~f~~~~~~~ 344 (373)
T 1q8y_A 333 NHPWLKDTLGME 344 (373)
T ss_dssp TCGGGTTCTTCT
T ss_pred hChhhhcccCcc
Confidence 7 444444333
No 240
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=3e-31 Score=276.91 Aligned_cols=238 Identities=26% Similarity=0.333 Sum_probs=178.2
Q ss_pred HHHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEE
Q 004935 426 ITNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 426 ~t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
..+.+.+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 3445568999999999999998 46799999986532 2345789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEcCC---CcEEEEeccCccccCCCCC
Q 004935 502 FMANGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLSGK---FQAKIADFGLSRTFPVEGS 568 (723)
Q Consensus 502 y~~~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~~~---~~~kl~DfGla~~~~~~~~ 568 (723)
|+++++|.+++.... .+++...+.++.+ ...+||||||+||+++.+ +.+||+|||+++......
T Consensus 102 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~- 178 (287)
T 2wei_A 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT- 178 (287)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-
T ss_pred ccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-
Confidence 999999998886432 2444444444333 333999999999999754 479999999998754321
Q ss_pred CceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccC
Q 004935 569 GTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHE 648 (723)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~ 648 (723)
......+++.|+|||.+.+ .++.++||||||++++||++|+.||...... +...... .+..... .+.. .
T Consensus 179 ---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~~~-~~~~-~ 247 (287)
T 2wei_A 179 ---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----DILKRVE-TGKYAFD-LPQW-R 247 (287)
T ss_dssp ---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH-HCCCCCC-SGGG-T
T ss_pred ---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-cCCCCCC-chhh-h
Confidence 1223457889999998865 4899999999999999999999999765432 1122111 1111100 0100 1
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 649 DFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 649 ~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
. ....+.+++.+|++.+|++|||+.|+++
T Consensus 248 ~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 248 T----ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp T----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h----cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1 1235789999999999999999999987
No 241
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=5.8e-31 Score=290.80 Aligned_cols=235 Identities=27% Similarity=0.393 Sum_probs=168.0
Q ss_pred hhhccccCcEE-EEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 431 ERVLGNGGFGT-VYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 431 ~~~lG~G~~g~-Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.+.||+|+||+ ||++..+++.||||++..... ..+.+|+++|+++ +||||+++++++.+....++||||++ |+|
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 46899999998 566667889999999976443 2357899999999 89999999999999999999999997 599
Q ss_pred HHHhccCCC-----CCCCHHH----HHHHHHhccccccCCCCCCEEEcC-----CCcEEEEeccCccccCCCCCCceeee
Q 004935 509 QALLLGEEA-----DILSWEG----RLRIAIEAAKVHRDVKSTNILLSG-----KFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 509 ~~~l~~~~~-----~~l~~~~----~l~i~~~~a~vH~Dlk~~NILl~~-----~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
.+++..... ....+.. .+..+|+...+||||||+|||++. ...+||+|||+++.............
T Consensus 105 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~ 184 (432)
T 3p23_A 105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184 (432)
T ss_dssp HHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----------
T ss_pred HHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeecc
Confidence 999976532 1223333 344455555599999999999943 34688999999987653322222334
Q ss_pred cccCCCccccccccc---cCCCCChhhHHHHHHHHHHHHc-CCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 575 TIAGTPGYLDPEYYI---SNRLTEKSDVYNFGVVLLEIIT-SKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~---~~~~~~~~DV~SfGvvL~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
...||+.|+|||.+. ...++.++|||||||+++||+| |+.||...... ............ .+. .
T Consensus 185 ~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-----~~~~~~~~~~~~-----~~~--~ 252 (432)
T 3p23_A 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-----QANILLGACSLD-----CLH--P 252 (432)
T ss_dssp -CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-----HHHHHTTCCCCT-----TSC--T
T ss_pred ccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-----HHHHHhccCCcc-----ccC--c
Confidence 567999999999987 4567889999999999999999 88898543221 111111111111 011 1
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.......+.+++.+|++.+|.+|||++||++
T Consensus 253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1223445779999999999999999999984
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=281.70 Aligned_cols=227 Identities=23% Similarity=0.377 Sum_probs=170.3
Q ss_pred HHHhhhhccccCcEEEEEEEE--CCceEEEEEecCCChh------hHHHHHHHHHHHHhc----cCCceeeEEEEEecCC
Q 004935 427 TNNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQ------GYKQFQAEVELLMRI----HHKNLTTLVGYCDEGT 494 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~------~~~~f~~Ei~~l~~l----~H~nIv~l~g~~~~~~ 494 (723)
.+.+.+.||+|+||.||+|.. +++.||||++...... ....+.+|+.++.++ +|+||+++++++...+
T Consensus 32 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~ 111 (312)
T 2iwi_A 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE 111 (312)
T ss_dssp -CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred ceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence 345568999999999999988 5669999999765321 223467899999999 8999999999999999
Q ss_pred ceEEEEEe-CCCCCHHHHhccCCCCCCCHHHHHHHHHh----------ccccccCCCCCCEEEc-CCCcEEEEeccCccc
Q 004935 495 NRGLIYEF-MANGNLQALLLGEEADILSWEGRLRIAIE----------AAKVHRDVKSTNILLS-GKFQAKIADFGLSRT 562 (723)
Q Consensus 495 ~~~lV~Ey-~~~gsL~~~l~~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~NILl~-~~~~~kl~DfGla~~ 562 (723)
..++|+|| +++++|.+++.... .+++...+.++.+ ...+||||||+||+++ .++.+||+|||+++.
T Consensus 112 ~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~ 189 (312)
T 2iwi_A 112 GFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL 189 (312)
T ss_dssp -CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred eEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence 99999999 89999999987532 2454444444333 3339999999999999 889999999999987
Q ss_pred cCCCCCCceeeecccCCCccccccccccCCCC-ChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccc
Q 004935 563 FPVEGSGTHVTTTIAGTPGYLDPEYYISNRLT-EKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESI 641 (723)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i 641 (723)
.... ......++..|+|||.+.+..+. .++|||||||+++||++|+.||..... ... ..
T Consensus 190 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~---~~------ 249 (312)
T 2iwi_A 190 LHDE-----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILE---AE------ 249 (312)
T ss_dssp CCSS-----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH---TC------
T ss_pred cccC-----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhh---hc------
Confidence 6432 12345689999999998877764 589999999999999999999864321 111 00
Q ss_pred cCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 642 VDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 642 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
..+... ....+.+++.+|++.+|++|||++|+++
T Consensus 250 --~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 250 --LHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --CCCCTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --cCCccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011111 2235779999999999999999999986
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=273.92 Aligned_cols=234 Identities=22% Similarity=0.281 Sum_probs=156.1
Q ss_pred hhhccccCcEEEEEEEE--CCceEEEEEecCCCh-hhH-HHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeCCCC
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA-QGY-KQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFMANG 506 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~-~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g 506 (723)
.+.||+|+||.||+|.. +++.||||++..... ... +.+.++..+++.++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 56899999999999998 477999999976532 223 33455556788889999999999999999999999999 44
Q ss_pred CHHHHhccCCCCCCCHHH----------HHHHHHhc-cccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeec
Q 004935 507 NLQALLLGEEADILSWEG----------RLRIAIEA-AKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTT 575 (723)
Q Consensus 507 sL~~~l~~~~~~~l~~~~----------~l~i~~~~-a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 575 (723)
.+..+.... ...+++.. .+..+|+. ..+||||||+||+++.++.+||+|||+++...... ....
T Consensus 109 ~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~ 183 (318)
T 2dyl_A 109 CAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----AKDR 183 (318)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------------
T ss_pred cHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc----cccc
Confidence 555554421 12233333 34444543 45999999999999999999999999997653221 2234
Q ss_pred ccCCCccccccccc-----cCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCC
Q 004935 576 IAGTPGYLDPEYYI-----SNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDF 650 (723)
Q Consensus 576 ~~gt~~y~aPE~~~-----~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~ 650 (723)
..+++.|+|||.+. ...++.++|||||||+++||++|+.||...... .+.......... +.+...
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~------~~~~~~- 253 (318)
T 2dyl_A 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD---FEVLTKVLQEEP------PLLPGH- 253 (318)
T ss_dssp ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHHHHSCC------CCCCSS-
T ss_pred cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc---HHHHHHHhccCC------CCCCcc-
Confidence 56899999999984 456899999999999999999999999754322 122222222211 111110
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 651 DINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 651 ~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+.+++.+||+.+|.+||+++++++
T Consensus 254 -~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 254 -MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 011235779999999999999999999987
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=7.2e-31 Score=299.79 Aligned_cols=256 Identities=24% Similarity=0.284 Sum_probs=184.7
Q ss_pred HHhhhhccccCcEEEEEEEE--CCceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEec------CCceEE
Q 004935 428 NNFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDE------GTNRGL 498 (723)
Q Consensus 428 ~~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~~l 498 (723)
+.+.+.||+|+||.||+|.. +++.||||++... .....+.|.+|++++++++||||+++++++.. .+..++
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~L 95 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL 95 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEE
Confidence 44568999999999999987 4679999998765 44556789999999999999999999999765 677899
Q ss_pred EEEeCCCCCHHHHhccCCC-CCCCHH----------HHHHHHHhccccccCCCCCCEEEcCCCc---EEEEeccCccccC
Q 004935 499 IYEFMANGNLQALLLGEEA-DILSWE----------GRLRIAIEAAKVHRDVKSTNILLSGKFQ---AKIADFGLSRTFP 564 (723)
Q Consensus 499 V~Ey~~~gsL~~~l~~~~~-~~l~~~----------~~l~i~~~~a~vH~Dlk~~NILl~~~~~---~kl~DfGla~~~~ 564 (723)
||||+++|+|.+++..... ..+++. ..+..+|+...+||||||+||+++.++. +||+|||+++...
T Consensus 96 VmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~ 175 (676)
T 3qa8_A 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD 175 (676)
T ss_dssp EEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTT
T ss_pred EEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccc
Confidence 9999999999999976421 123322 2334444444499999999999997664 9999999998764
Q ss_pred CCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCc----cc
Q 004935 565 VEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDI----ES 640 (723)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~ 640 (723)
... ......||+.|+|||.+.+..++.++|||||||+++||++|+.||..... ...|.......... .+
T Consensus 176 ~~~----~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 176 QGE----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ---PVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp SCC----CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH---HHHSSTTCC------CCSCC
T ss_pred ccc----ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc---hhhhhhhhhcccchhhhhhh
Confidence 322 22446789999999999999999999999999999999999999965421 11111111000000 00
Q ss_pred ccC------Cc--ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHH-----HHHHHHHhhhhH
Q 004935 641 IVD------PR--LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQ-----VVMELNESLAIE 690 (723)
Q Consensus 641 i~d------~~--l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~e-----vl~~L~~~~~~~ 690 (723)
... .. ............+.+++.+|++.||++|||+++ +.+.++++++..
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 000 00 111223345677899999999999999999988 567777776544
No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=2.4e-31 Score=282.41 Aligned_cols=225 Identities=24% Similarity=0.384 Sum_probs=173.1
Q ss_pred HhhhhccccCcEEEEEEEE--CCceEEEEEecCCCh------hhHHHHHHHHHHHHhcc--CCceeeEEEEEecCCceEE
Q 004935 429 NFERVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA------QGYKQFQAEVELLMRIH--HKNLTTLVGYCDEGTNRGL 498 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~------~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~l 498 (723)
.+.+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.++++++ |+||+++++++...+..++
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~l 125 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 125 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEE
Confidence 3467899999999999987 567999999865421 12245778999999996 5999999999999999999
Q ss_pred EEEeCCC-CCHHHHhccCCCCCCCHHHH----------HHHHHhccccccCCCCCCEEEc-CCCcEEEEeccCccccCCC
Q 004935 499 IYEFMAN-GNLQALLLGEEADILSWEGR----------LRIAIEAAKVHRDVKSTNILLS-GKFQAKIADFGLSRTFPVE 566 (723)
Q Consensus 499 V~Ey~~~-gsL~~~l~~~~~~~l~~~~~----------l~i~~~~a~vH~Dlk~~NILl~-~~~~~kl~DfGla~~~~~~ 566 (723)
|+||+.. ++|.+++.... .+++... +..+++...+||||||+|||++ +++.+||+|||+++.....
T Consensus 126 v~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~ 203 (320)
T 3a99_A 126 ILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203 (320)
T ss_dssp EEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred EEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc
Confidence 9999986 89999987532 2343333 3333444449999999999999 7899999999999876422
Q ss_pred CCCceeeecccCCCccccccccccCCC-CChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCc
Q 004935 567 GSGTHVTTTIAGTPGYLDPEYYISNRL-TEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPR 645 (723)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~ 645 (723)
......||+.|+|||.+.+..+ +.++|||||||+++||++|+.||..... ... . .. .
T Consensus 204 -----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~----~-~~------~ 261 (320)
T 3a99_A 204 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIR----G-QV------F 261 (320)
T ss_dssp -----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH----C-CC------C
T ss_pred -----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhc----c-cc------c
Confidence 2234568999999999987766 6889999999999999999999864321 111 0 00 0
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 646 LHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 646 l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
+.... ...+.+++.+||+.+|++|||++|+++
T Consensus 262 ~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 262 FRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11112 235779999999999999999999987
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=4.2e-30 Score=300.56 Aligned_cols=227 Identities=19% Similarity=0.270 Sum_probs=174.1
Q ss_pred HhhhhccccCcEEEEEEEE---CCceEEEEEecCC-ChhhHHHHHHHHHHHHhccCCceeeEEEEEecCCc-----eEEE
Q 004935 429 NFERVLGNGGFGTVYHGYL---DGTEVAVKMLSPS-SAQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTN-----RGLI 499 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~---~~~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~-----~~lV 499 (723)
.+.+.||+|+||.||+|.+ +++.||||++... .......|.+|++++++++||||+++++++...+. .++|
T Consensus 83 ~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv 162 (681)
T 2pzi_A 83 EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIV 162 (681)
T ss_dssp EEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEE
Confidence 4467899999999999997 4679999998754 34455679999999999999999999999987665 6999
Q ss_pred EEeCCCCCHHHHhccCCCCCCCHHHHHHHHHhcc----------ccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 004935 500 YEFMANGNLQALLLGEEADILSWEGRLRIAIEAA----------KVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSG 569 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~~~l~~~~~l~i~~~~a----------~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 569 (723)
|||+++++|.+++.. .++|...+.++.+++ .|||||||+|||++.+ .+||+|||+++.....
T Consensus 163 ~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~--- 234 (681)
T 2pzi_A 163 MEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF--- 234 (681)
T ss_dssp EECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC---
T ss_pred EEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC---
Confidence 999999999987754 466666555554443 3999999999999986 8999999999875322
Q ss_pred ceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCC
Q 004935 570 THVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHED 649 (723)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~ 649 (723)
....||++|+|||.+.+. ++.++|||||||+|+||++|..|+....... +. ...
T Consensus 235 ----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------~~-------~~~ 288 (681)
T 2pzi_A 235 ----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------LP-------EDD 288 (681)
T ss_dssp ----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------CC-------TTC
T ss_pred ----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--------------cc-------ccc
Confidence 345699999999998765 4899999999999999999998876432110 00 000
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHhhhh
Q 004935 650 FDINSVWKTVEIAMACVSQTSTKRP-TMNQVVMELNESLAI 689 (723)
Q Consensus 650 ~~~~~~~~l~~l~~~Cl~~~p~~RP-sm~evl~~L~~~~~~ 689 (723)
........+.+++.+|++.+|.+|| +++++...|...+..
T Consensus 289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0011224678999999999999999 577777777776543
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=1.4e-30 Score=271.87 Aligned_cols=224 Identities=12% Similarity=0.121 Sum_probs=163.8
Q ss_pred HhhhhccccCcEEEEEEEEC--CceEEEEEecCCC---hhhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEeC
Q 004935 429 NFERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEFM 503 (723)
Q Consensus 429 ~f~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~ 503 (723)
.+.+.||+|+||.||+|... ++.||||++.... ....+.|.+|++++++++||||+++++++...+..++||||+
T Consensus 34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 113 (286)
T 3uqc_A 34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWI 113 (286)
T ss_dssp EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEec
Confidence 34678999999999999985 6799999997653 334578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccCCC--CCCCHH----HHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeeeccc
Q 004935 504 ANGNLQALLLGEEA--DILSWE----GRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIA 577 (723)
Q Consensus 504 ~~gsL~~~l~~~~~--~~l~~~----~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~ 577 (723)
++++|.+++..... +...+. ..+..+|+...+||||||+|||++.++.+||+++|
T Consensus 114 ~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~------------------- 174 (286)
T 3uqc_A 114 RGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA------------------- 174 (286)
T ss_dssp CEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-------------------
T ss_pred CCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-------------------
Confidence 99999999965321 111222 23344444444999999999999999999998543
Q ss_pred CCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHH
Q 004935 578 GTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWK 657 (723)
Q Consensus 578 gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~ 657 (723)
|++ .++.++|||||||++|||+||+.||........+.. ... .+... +.............
T Consensus 175 ----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~----~~~--~~~~~--~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 ----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP----AER--DTAGQ--PIEPADIDRDIPFQ 235 (286)
T ss_dssp ----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE----CCB--CTTSC--BCCHHHHCTTSCHH
T ss_pred ----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH----HHH--HhccC--CCChhhcccCCCHH
Confidence 222 368899999999999999999999976543211100 000 00000 00000001112345
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHHHHhhhhHh
Q 004935 658 TVEIAMACVSQTSTKRPTMNQVVMELNESLAIET 691 (723)
Q Consensus 658 l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~~~~ 691 (723)
+.+++.+||+.||.+| |+.|+++.|+++...+.
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 7899999999999999 99999999999876543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=2.4e-29 Score=276.55 Aligned_cols=224 Identities=17% Similarity=0.127 Sum_probs=156.3
Q ss_pred hhhccccCcEEEEEEEEC--CceEEEEEecCCCh---hhHHHHHHHHHHHHhccC-Cc----------eee---------
Q 004935 431 ERVLGNGGFGTVYHGYLD--GTEVAVKMLSPSSA---QGYKQFQAEVELLMRIHH-KN----------LTT--------- 485 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~--~~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H-~n----------Iv~--------- 485 (723)
.+.||+|+||.||+|.+. ++.||||++..... ...+.|.+|+.+++.++| +| ++.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 468999999999999984 77999999884332 235779999999999977 21 111
Q ss_pred --EEEEEec-----CCceEEEEEeCCCCCHHHHhc-----cCCCCCCCHHHHHHHHHh----------ccccccCCCCCC
Q 004935 486 --LVGYCDE-----GTNRGLIYEFMANGNLQALLL-----GEEADILSWEGRLRIAIE----------AAKVHRDVKSTN 543 (723)
Q Consensus 486 --l~g~~~~-----~~~~~lV~Ey~~~gsL~~~l~-----~~~~~~l~~~~~l~i~~~----------~a~vH~Dlk~~N 543 (723)
+..++.. ....+++|++ .+++|.+++. ......+.+..++.++.+ ...+||||||+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~N 241 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 241 (413)
T ss_dssp --------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred CccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccce
Confidence 1111111 1234556665 4679999884 222333444444444333 334999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCceeeecccCCCcccccccc----------ccCCCCChhhHHHHHHHHHHHHcCC
Q 004935 544 ILLSGKFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYY----------ISNRLTEKSDVYNFGVVLLEIITSK 613 (723)
Q Consensus 544 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DV~SfGvvL~elltg~ 613 (723)
||++.++.+||+|||+++... .......| +.|+|||.+ ....++.++|||||||++|||+||+
T Consensus 242 ILl~~~~~~kL~DFG~a~~~~------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~ 314 (413)
T 3dzo_A 242 IVLDQRGGVFLTGFEHLVRDG------ASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314 (413)
T ss_dssp EEECTTCCEEECCGGGCEETT------EEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred EEEecCCeEEEEeccceeecC------CccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence 999999999999999988642 12344567 999999999 5556889999999999999999999
Q ss_pred CccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 614 SVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 614 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
.||........ ...++... ... ...+.+++.+||+.+|++||++.++++
T Consensus 315 ~Pf~~~~~~~~-------------~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 315 LPNTDDAALGG-------------SEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCCTTGGGSC-------------SGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcchhhh-------------HHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99975432111 11111100 111 246789999999999999999888854
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=5.6e-29 Score=261.44 Aligned_cols=209 Identities=19% Similarity=0.265 Sum_probs=156.3
Q ss_pred hhccccCcEEEEEEEE--CCceEEEEEecCCChhhHHHHHHHHHHH-HhccCCceeeEEEEEec----CCceEEEEEeCC
Q 004935 432 RVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSAQGYKQFQAEVELL-MRIHHKNLTTLVGYCDE----GTNRGLIYEFMA 504 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~f~~Ei~~l-~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~~ 504 (723)
+.||+|+||.||++.. +++.||||++... ..+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 6799999999999998 5679999998642 4577899988 55599999999999876 677899999999
Q ss_pred CCCHHHHhccCCCCCCCHHHHHHHHHhc----------cccccCCCCCCEEEcC---CCcEEEEeccCccccCCCCCCce
Q 004935 505 NGNLQALLLGEEADILSWEGRLRIAIEA----------AKVHRDVKSTNILLSG---KFQAKIADFGLSRTFPVEGSGTH 571 (723)
Q Consensus 505 ~gsL~~~l~~~~~~~l~~~~~l~i~~~~----------a~vH~Dlk~~NILl~~---~~~~kl~DfGla~~~~~~~~~~~ 571 (723)
+|+|.+++.......+++.....++.++ ..+||||||+|||++. ++.+||+|||+++...
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------- 171 (299)
T 3m2w_A 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------- 171 (299)
T ss_dssp SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-------
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-------
Confidence 9999999987654456655554444443 3399999999999998 7899999999986532
Q ss_pred eeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCC
Q 004935 572 VTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFD 651 (723)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~ 651 (723)
+..++.++|||||||+++||++|+.||........ .......+..... ...
T Consensus 172 ------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~---------~~~~~~~~~~~~~--~~~ 222 (299)
T 3m2w_A 172 ------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---------SPGMKTRIRMGQY--EFP 222 (299)
T ss_dssp ------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCTTCC--SSC
T ss_pred ------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh---------hHHHHHHHhhccc--cCC
Confidence 23467899999999999999999999965432110 0000011100000 011
Q ss_pred ----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 004935 652 ----INSVWKTVEIAMACVSQTSTKRPTMNQVVM 681 (723)
Q Consensus 652 ----~~~~~~l~~l~~~Cl~~~p~~RPsm~evl~ 681 (723)
......+.+++.+|++.+|.+|||++|+++
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112346789999999999999999999987
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=1.1e-28 Score=263.69 Aligned_cols=233 Identities=15% Similarity=0.132 Sum_probs=164.5
Q ss_pred HHHhhhhccccCcEEEEEEEECCceEEEEEecCCC--------hhhHHHHHHHHHHHHhcc---------CCceeeEEEE
Q 004935 427 TNNFERVLGNGGFGTVYHGYLDGTEVAVKMLSPSS--------AQGYKQFQAEVELLMRIH---------HKNLTTLVGY 489 (723)
Q Consensus 427 t~~f~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~--------~~~~~~f~~Ei~~l~~l~---------H~nIv~l~g~ 489 (723)
.+.+.+.||+|+||.||+|+.+++.||||++.... ....+.+.+|++++++++ |+||+++.+.
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~ 100 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV 100 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred cchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence 45567899999999999999999999999997542 223477899999999886 8888888776
Q ss_pred Ee------------------------------cCCceEEEEEeCCCCCHHHHhccCCC---CC----CCHHHHHHHHH-h
Q 004935 490 CD------------------------------EGTNRGLIYEFMANGNLQALLLGEEA---DI----LSWEGRLRIAI-E 531 (723)
Q Consensus 490 ~~------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~---~~----l~~~~~l~i~~-~ 531 (723)
+. ..+..++||||+++|++.+.+.+... .+ .+....+..+| +
T Consensus 101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 180 (336)
T 2vuw_A 101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEAS 180 (336)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 42 26789999999999976665543211 11 12233445555 5
Q ss_pred ccccccCCCCCCEEEcCCC--------------------cEEEEeccCccccCCCCCCceeeecccCCCccccccccccC
Q 004935 532 AAKVHRDVKSTNILLSGKF--------------------QAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISN 591 (723)
Q Consensus 532 ~a~vH~Dlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 591 (723)
...+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|||.+.+.
T Consensus 181 ~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~~~~gt~~y~aPE~~~g~ 252 (336)
T 2vuw_A 181 LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------GIVVFCDVSMDEDLFTGD 252 (336)
T ss_dssp HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------TEEECCCCTTCSGGGCCC
T ss_pred CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------CcEEEeecccChhhhcCC
Confidence 5569999999999999887 899999999987532 134689999999999876
Q ss_pred CCCChhhHHHHHHH-HHHHHcCCCccccCcccccHHHHHHHHhcCCCcccccCCcccCCCCHHHHHHHHHHHHhccCCCC
Q 004935 592 RLTEKSDVYNFGVV-LLEIITSKSVIERTHERIHITQWVSFMLGKGDIESIVDPRLHEDFDINSVWKTVEIAMACVSQTS 670 (723)
Q Consensus 592 ~~~~~~DV~SfGvv-L~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~~p 670 (723)
. +.++||||+|++ ..++++|..||...... .............. ..............+.+++.+||+.+
T Consensus 253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~dli~~~L~~d- 323 (336)
T 2vuw_A 253 G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTDKMLKQMTFK----TKCNTPAMKQIKRKIQEFHRTMLNFS- 323 (336)
T ss_dssp S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHHHHHHTCCCS----SCCCSHHHHHHHHHHHHHHHHGGGSS-
T ss_pred C-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHHhhhhhhccC----cccchhhhhhcCHHHHHHHHHHhccC-
Confidence 6 899999998777 77788999998532100 00111111111100 11111112345667899999999966
Q ss_pred CCCCCHHHHH
Q 004935 671 TKRPTMNQVV 680 (723)
Q Consensus 671 ~~RPsm~evl 680 (723)
|++|++
T Consensus 324 ----sa~e~l 329 (336)
T 2vuw_A 324 ----SATDLL 329 (336)
T ss_dssp ----SHHHHH
T ss_pred ----CHHHHH
Confidence 888877
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.88 E-value=5.1e-24 Score=242.59 Aligned_cols=180 Identities=15% Similarity=0.091 Sum_probs=119.9
Q ss_pred hccccCcEEEEEEEE--CCceEEEEEecCCC----------hhhHHHHHHHHHHHHhc-cCCceeeEEEEEecCCceEEE
Q 004935 433 VLGNGGFGTVYHGYL--DGTEVAVKMLSPSS----------AQGYKQFQAEVELLMRI-HHKNLTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~----------~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~lV 499 (723)
..+.|+.|.+.++.. -|+.+++|.+.... ....++|.+|+++|+++ .|+||+++++++.+.+..+||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 355666766665443 57899999996542 12346799999999999 799999999999999999999
Q ss_pred EEeCCCCCHHHHhccCCC-C----CCCHHHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 500 YEFMANGNLQALLLGEEA-D----ILSWEGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 500 ~Ey~~~gsL~~~l~~~~~-~----~l~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
|||++||+|.+++..... . ..+....|..+|+...|||||||+||||++++++||+|||+|+...... ....
T Consensus 321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~---~~~~ 397 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC---SWPT 397 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC------CCSH
T ss_pred EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC---cccc
Confidence 999999999999986532 1 1233444555666666999999999999999999999999998764322 2234
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCcc
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVI 616 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~ 616 (723)
...||++|+|||.+.+ .+..++|+||+|++++++.++..++
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 5679999999999865 4677899999999988887765543
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.84 E-value=6e-22 Score=224.26 Aligned_cols=180 Identities=12% Similarity=0.145 Sum_probs=137.1
Q ss_pred hhhccccCcEEEEEEEECCceEEEEEecCCCh--------hhHHHHHHHHHHHHhccCCceeeEEEEEecCCceEEEEEe
Q 004935 431 ERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSA--------QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~lV~Ey 502 (723)
.+.||+|+||.||+|...+..+++|+...... ...++|.+|++++++++||||+++..++...+..++||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 46899999999999988899999998754321 1234689999999999999999766677678888999999
Q ss_pred CCCCCHHHHhccCCCCCCCHHHH----HHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCCCCc----eeee
Q 004935 503 MANGNLQALLLGEEADILSWEGR----LRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEGSGT----HVTT 574 (723)
Q Consensus 503 ~~~gsL~~~l~~~~~~~l~~~~~----l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~----~~~~ 574 (723)
+++|+|.+++.. .+.+..+ +..+|+...+||||||+|||++. ++||+|||+++......... ....
T Consensus 421 ~~ggsL~~~l~~----~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~ 494 (540)
T 3en9_A 421 INGKLAKDVIED----NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKK 494 (540)
T ss_dssp CCSEEHHHHSTT----CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHH----HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhh
Confidence 999999999976 3444444 45555555599999999999999 99999999999864221100 0123
Q ss_pred cccCCCcccccccccc--CCCCChhhHHHHHHHHHHHHcCCCcc
Q 004935 575 TIAGTPGYLDPEYYIS--NRLTEKSDVYNFGVVLLEIITSKSVI 616 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~--~~~~~~~DV~SfGvvL~elltg~~p~ 616 (723)
...||+.|+|||.+.. ..|+..+|+|+..+-.++-+.++.++
T Consensus 495 ~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 495 AVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred hhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 5679999999999976 66888899999999988888777655
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.70 E-value=1e-17 Score=173.77 Aligned_cols=135 Identities=16% Similarity=0.121 Sum_probs=101.3
Q ss_pred hhhccccCcEEEEEEEE-CCceEEEEEecCCCh------------------hhHHHHHHHHHHHHhccCCceeeEEEEEe
Q 004935 431 ERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSA------------------QGYKQFQAEVELLMRIHHKNLTTLVGYCD 491 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~------------------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 491 (723)
.+.||+|+||.||+|.. +++.||||+++.... .....+.+|+++|++++| +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCeEEe
Confidence 37899999999999999 467999999975322 134578999999999994 55555443
Q ss_pred cCCceEEEEEeCCCCCHHHHhccCCCCCCCH----HHHHHHHHhccccccCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 004935 492 EGTNRGLIYEFMANGNLQALLLGEEADILSW----EGRLRIAIEAAKVHRDVKSTNILLSGKFQAKIADFGLSRTFPVEG 567 (723)
Q Consensus 492 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~----~~~l~i~~~~a~vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 567 (723)
. +..++||||+++|+|.+ +.. .....+ ...+..+|+...+||||||+|||++ ++.+||+|||+++..
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~---- 242 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEV---- 242 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEET----
T ss_pred c-cceEEEEEecCCCcHHH-cch--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeEC----
Confidence 3 56799999999999998 432 222223 3344555555559999999999999 999999999998743
Q ss_pred CCceeeecccCCCccccccccc
Q 004935 568 SGTHVTTTIAGTPGYLDPEYYI 589 (723)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~ 589 (723)
..++|||++.
T Consensus 243 ------------~~~~a~e~l~ 252 (282)
T 1zar_A 243 ------------GEEGWREILE 252 (282)
T ss_dssp ------------TSTTHHHHHH
T ss_pred ------------CCCCHHHHHH
Confidence 2467888874
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.49 E-value=3.3e-14 Score=145.39 Aligned_cols=127 Identities=23% Similarity=0.267 Sum_probs=92.3
Q ss_pred hhhccccCcEEEEEEEE--CCce--EEEEEecCCChh------------------------hHHHHHHHHHHHHhccCCc
Q 004935 431 ERVLGNGGFGTVYHGYL--DGTE--VAVKMLSPSSAQ------------------------GYKQFQAEVELLMRIHHKN 482 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~--~~~~--vavK~~~~~~~~------------------------~~~~f~~Ei~~l~~l~H~n 482 (723)
.+.||+|+||.||+|.. +|+. ||||+++..... ....+.+|+++|.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999998 7888 999997643211 1136889999999998875
Q ss_pred e--eeEEEEEecCCceEEEEEeCCC-C----CHHHHhccC-CCCCC----CHHHHHHHHH-hccccccCCCCCCEEEcCC
Q 004935 483 L--TTLVGYCDEGTNRGLIYEFMAN-G----NLQALLLGE-EADIL----SWEGRLRIAI-EAAKVHRDVKSTNILLSGK 549 (723)
Q Consensus 483 I--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~-~~~~l----~~~~~l~i~~-~~a~vH~Dlk~~NILl~~~ 549 (723)
+ ...+++ +..+|||||+.+ | +|.++.... ..... +....+..+| ....+||||||+|||++.
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~- 206 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID- 206 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS-
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC-
Confidence 4 444443 367899999952 4 777765431 11222 2334455566 566699999999999998
Q ss_pred CcEEEEeccCcccc
Q 004935 550 FQAKIADFGLSRTF 563 (723)
Q Consensus 550 ~~~kl~DfGla~~~ 563 (723)
.++|+|||+|...
T Consensus 207 -~~~liDFG~a~~~ 219 (258)
T 1zth_A 207 -KVYFIDMGQAVTL 219 (258)
T ss_dssp -SEEECCCTTCEET
T ss_pred -cEEEEECcccccC
Confidence 9999999999764
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.36 E-value=2.3e-13 Score=161.08 Aligned_cols=124 Identities=25% Similarity=0.355 Sum_probs=95.1
Q ss_pred cchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcC
Q 004935 233 LPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTG 312 (723)
Q Consensus 233 lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g 312 (723)
+|+.+..+..++.+++..+...+..|..+.. .+.|+.|+|++|+|+|.||.+|++|++|+.|||++|+|+|
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~---------l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g 694 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS---------MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGG---------CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhc---------cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccC
Confidence 3444444455555555555444444432222 2578999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCcEEEccCCCCCCchhhc--ccCccccccCCCCCCCCCC--CCCCC
Q 004935 313 PVPDFLSQLPFLTELNLKGTIPNGLIEKQ--KNGLLSLSVEGNPDLCPEA--SCTAD 365 (723)
Q Consensus 313 ~iP~~l~~l~~L~~l~l~~n~~~g~~p~~--~~~~~~l~~~~n~~lc~~~--~c~~~ 365 (723)
.||..++++++|+.|+|++|.++|.||.. +..+...+|.||+++|+.+ .|...
T Consensus 695 ~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 695 RIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp CCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred cCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 99999999999999999999999999974 3355667899999999864 56543
No 256
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.32 E-value=1.6e-12 Score=123.96 Aligned_cols=147 Identities=13% Similarity=0.114 Sum_probs=93.4
Q ss_pred eEEEEEecCCCCCCCccCCCCCCCceEecCCCCC-Ccccc-CccccccCCCCCCchhhhhhceeccCCCCceEEeeC-CC
Q 004935 83 SLFRRWDIGSRSSETFRYPDDIYDRIWLPNSLPN-SEPIN-TTSDIISMNDYQGPSTVMQTAVIPTNGSNSLQLSWE-PN 159 (723)
Q Consensus 83 ~~~~r~~~g~~~~~~~rypdD~~dR~W~~~~~~~-~~~~~-t~~~i~~~~~~~~P~~v~~tA~~~~~~~~~~~~~w~-~~ 159 (723)
+...|.|||+.. +. |..+|.|.++.... ....+ ....+........|+.|||||..... +++|. |.
T Consensus 5 ~~~~~INcGg~~---~~---d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~-----~~tY~f~v 73 (174)
T 2jwp_A 5 KVIWAVNAGGES---HV---DVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED-----SFGYDIPI 73 (174)
T ss_dssp HEEEEEEETSSS---EE---ETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS-----CEEEEEEC
T ss_pred cEEEEEECCCCC---cc---CCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC-----CeEEEEEe
Confidence 357899999863 22 67899999885421 11111 11111112224458899999976432 56777 77
Q ss_pred CCccceEEEeeeecccccccCCcceEEEEEEcCccccCCccccee-----------eeE------EEEeeeeecccceEE
Q 004935 160 DPKFLYYAYLYFSEFENVQANNQTREIIIYINGIDWFGPFSPLHF-----------AAN------TIYSTWPILTAEKIE 222 (723)
Q Consensus 160 ~~~~~y~~~lhF~e~~~~~~~~~~R~f~i~ln~~~~~~~~~p~~l-----------~~~------~~~~~~p~~~~~~~~ 222 (723)
+++..|.|+|||||+.... ...|+|+|++||......+++... ..+ .+.+.++. ..+.++
T Consensus 74 ~~~G~Y~VrLhF~ei~~~~--~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~-~~g~L~ 150 (174)
T 2jwp_A 74 KEEGEYVLVLKFAEVYFAQ--SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVST-FTGKLS 150 (174)
T ss_dssp CSCEEEEEEEEEECCSCCC--SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEE-CCSEEE
T ss_pred CCCeEEEEEEEEeccccCC--CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecc-cCCeEE
Confidence 7778899999999998533 367999999999887665654311 011 00111122 456788
Q ss_pred EEEEcCCCCCcchhhhhhhhhhh
Q 004935 223 FSINTTESSTLPPILNAYEIYRA 245 (723)
Q Consensus 223 lsl~~~~~s~lPp~inale~~~~ 245 (723)
|++.+.. .-.|+|||+|+++.
T Consensus 151 I~f~p~~--~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 151 VEFVKGY--YDNPKVCALFIMKG 171 (174)
T ss_dssp EEEECSS--SCSSSEEEEEEESS
T ss_pred EEEeccC--CCCcEEEEEEEEeC
Confidence 9998742 23599999998763
No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.19 E-value=2.3e-12 Score=137.45 Aligned_cols=129 Identities=9% Similarity=0.088 Sum_probs=86.3
Q ss_pred hhhhccccCcEEEEEEEE-CCceEEEEEecCCCh--------------hhHH--------HHHHHHHHHHhccCCcee--
Q 004935 430 FERVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSA--------------QGYK--------QFQAEVELLMRIHHKNLT-- 484 (723)
Q Consensus 430 f~~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~--------------~~~~--------~f~~Ei~~l~~l~H~nIv-- 484 (723)
+.+.||+|++|.||+|.. +|+.||||+++.... .... ...+|...|.++.+.++.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 356899999999999997 577999999764210 0001 124567777777655442
Q ss_pred eEEEEEecCCceEEEEEeCCCCCHHHHhccCCCC--CCCHHHHHHHHHhccccccCCCCCCEEEcCCC----------cE
Q 004935 485 TLVGYCDEGTNRGLIYEFMANGNLQALLLGEEAD--ILSWEGRLRIAIEAAKVHRDVKSTNILLSGKF----------QA 552 (723)
Q Consensus 485 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~--~l~~~~~l~i~~~~a~vH~Dlk~~NILl~~~~----------~~ 552 (723)
..+++ ...+|||||+++++|.++....... ..+....+..+|+...|||||||.|||+++++ .+
T Consensus 179 ~p~~~----~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~ 254 (397)
T 4gyi_A 179 EPIAQ----SRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTP 254 (397)
T ss_dssp CEEEE----ETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred eeeec----cCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccce
Confidence 22222 2347999999999987764322111 11233445556666669999999999998876 38
Q ss_pred EEEeccCccc
Q 004935 553 KIADFGLSRT 562 (723)
Q Consensus 553 kl~DfGla~~ 562 (723)
.|+||+-+..
T Consensus 255 ~iID~~Q~V~ 264 (397)
T 4gyi_A 255 IIIXFPQMVS 264 (397)
T ss_dssp EECCCTTCEE
T ss_pred EEEEeCCccc
Confidence 9999997654
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.12 E-value=5.2e-11 Score=140.88 Aligned_cols=81 Identities=25% Similarity=0.400 Sum_probs=73.6
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCc---ccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGL---LSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~---~~l~~ 350 (723)
+.|+.|||++|+|+|.||.+|++|++|+.|+|++|+|+|.||..+++|++|+.|||++|.++|.+|..+..+ ..+.+
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 578999999999999999999999999999999999999999999999999999999999999999887654 34556
Q ss_pred CCCC
Q 004935 351 EGNP 354 (723)
Q Consensus 351 ~~n~ 354 (723)
++|.
T Consensus 712 s~N~ 715 (768)
T 3rgz_A 712 SNNN 715 (768)
T ss_dssp CSSE
T ss_pred cCCc
Confidence 6663
No 259
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.12 E-value=5.6e-11 Score=124.89 Aligned_cols=150 Identities=15% Similarity=0.232 Sum_probs=99.8
Q ss_pred ccccccCCc---ceEEEEEEcCccccC--CcccceeeeEEEEeeeeecccceEEEEEE--cCCCCCcchhhhhhhhhhhh
Q 004935 174 FENVQANNQ---TREIIIYINGIDWFG--PFSPLHFAANTIYSTWPILTAEKIEFSIN--TTESSTLPPILNAYEIYRAK 246 (723)
Q Consensus 174 ~~~~~~~~~---~R~f~i~ln~~~~~~--~~~p~~l~~~~~~~~~p~~~~~~~~lsl~--~~~~s~lPp~inale~~~~~ 246 (723)
|.++.|... .|+-.+.+.+..+.+ .+++. +.. ......+.+. ....+.+|+.+..+..++.+
T Consensus 38 w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~-l~~----------l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L 106 (313)
T 1ogq_A 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSS-LAN----------LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106 (313)
T ss_dssp STTEEECCSSSCCCEEEEEEECCCCSSCEECCGG-GGG----------CTTCSEEEEEEETTEESCCCGGGGGCTTCSEE
T ss_pred CcceEeCCCCCCceEEEEECCCCCccCCcccChh-HhC----------CCCCCeeeCCCCCcccccCChhHhcCCCCCEE
Confidence 899998643 688888888877665 33321 110 1223335554 34455677777777777777
Q ss_pred ccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCC-CCc
Q 004935 247 EFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLP-FLT 325 (723)
Q Consensus 247 ~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~-~L~ 325 (723)
.+..+...+..+..+. ..++|+.|+|++|+++|.+|..+++|++|++|+|++|+++|.+|..+++++ +|+
T Consensus 107 ~Ls~n~l~~~~p~~~~---------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~ 177 (313)
T 1ogq_A 107 YITHTNVSGAIPDFLS---------QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFT 177 (313)
T ss_dssp EEEEECCEEECCGGGG---------GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCC
T ss_pred ECcCCeeCCcCCHHHh---------CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCc
Confidence 7655544332222111 125678888888888888888888888888888888888888888888877 788
Q ss_pred EEEccCCCCCCchhhccc
Q 004935 326 ELNLKGTIPNGLIEKQKN 343 (723)
Q Consensus 326 ~l~l~~n~~~g~~p~~~~ 343 (723)
.|+|++|.++|.+|..+.
T Consensus 178 ~L~L~~N~l~~~~~~~~~ 195 (313)
T 1ogq_A 178 SMTISRNRLTGKIPPTFA 195 (313)
T ss_dssp EEECCSSEEEEECCGGGG
T ss_pred EEECcCCeeeccCChHHh
Confidence 888888888777776554
No 260
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.09 E-value=2.1e-11 Score=136.30 Aligned_cols=69 Identities=22% Similarity=0.294 Sum_probs=45.4
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCC-Cchhhccc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPN-GLIEKQKN 343 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~-g~~p~~~~ 343 (723)
.++|+.|+|++|.|+| +|+.++.+++|+.|+|++|+|++ +|..++.+++|+.|+|++|.+. +.+|..+.
T Consensus 190 l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 190 FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp CTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred CCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 3567777777777775 44457777777777777777774 6666677777777777777666 44554443
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.05 E-value=9.2e-11 Score=123.26 Aligned_cols=103 Identities=25% Similarity=0.398 Sum_probs=86.7
Q ss_pred cccccCCCcee--ecCccCCCCCCCCCceEEEEcCCCcccc--cCcccccCCCCCCeeeCcC-CcCcCCCCccCCCCCCC
Q 004935 250 QFLTNQQDAYL--WQGLNCSYPEYDPPRITSLNLSSSGIAG--DIAPYISTLTSIQILDLSN-NNLTGPVPDFLSQLPFL 324 (723)
Q Consensus 250 ~~~~~~~~~~~--w~g~~c~~~~~~~~~l~~l~ls~n~l~g--~ip~~~~~l~~L~~L~ls~-N~l~g~iP~~l~~l~~L 324 (723)
..|....++|. |.|+.|.... ...+++.|+|++|+++| .+|+.|+++++|++|+|++ |+++|.+|..++++++|
T Consensus 25 ~~W~~~~~~C~~~w~gv~C~~~~-~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L 103 (313)
T 1ogq_A 25 SSWLPTTDCCNRTWLGVLCDTDT-QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103 (313)
T ss_dssp TTCCTTSCTTTTCSTTEEECCSS-SCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTC
T ss_pred cCCCCCCCCCcCCCcceEeCCCC-CCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCC
Confidence 34556678898 9999997422 12589999999999999 9999999999999999995 99999999999999999
Q ss_pred cEEEccCCCCCCchhhcccC---ccccccCCC
Q 004935 325 TELNLKGTIPNGLIEKQKNG---LLSLSVEGN 353 (723)
Q Consensus 325 ~~l~l~~n~~~g~~p~~~~~---~~~l~~~~n 353 (723)
++|+|++|.+++.+|..+.. +..+.+.+|
T Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 135 (313)
T 1ogq_A 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135 (313)
T ss_dssp SEEEEEEECCEEECCGGGGGCTTCCEEECCSS
T ss_pred CEEECcCCeeCCcCCHHHhCCCCCCEEeCCCC
Confidence 99999999999999887654 334455555
No 262
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.02 E-value=1.7e-10 Score=133.48 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=26.8
Q ss_pred eecc---cccccCCcceEEEEEEcCccccCCcccc
Q 004935 171 FSEF---ENVQANNQTREIIIYINGIDWFGPFSPL 202 (723)
Q Consensus 171 F~e~---~~~~~~~~~R~f~i~ln~~~~~~~~~p~ 202 (723)
+|.| .++.|+...||..+.+.+..+.|.+++.
T Consensus 66 ~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~ 100 (636)
T 4eco_A 66 LDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDA 100 (636)
T ss_dssp GGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGG
T ss_pred cccccCCCCeEEcCCCCEEEEEecCcccCCcCChH
Confidence 4778 9999976689999999999888777664
No 263
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.01 E-value=6.6e-10 Score=105.59 Aligned_cols=100 Identities=24% Similarity=0.227 Sum_probs=83.5
Q ss_pred eeecCccCCCCC------CCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC
Q 004935 259 YLWQGLNCSYPE------YDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 259 ~~w~g~~c~~~~------~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n 332 (723)
|.|+.+.|+... ..++.++.|+|++|+|++..|..|++|++|+.|+|++|+|++..|..+..+++|+.|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 567777777532 23468999999999999988999999999999999999999777777899999999999999
Q ss_pred CCCCchhhccc---CccccccCCCCCCCC
Q 004935 333 IPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 333 ~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
.+++..+..+. .+..+.+.+|+..|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 99987775444 456678889987764
No 264
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.96 E-value=3.7e-10 Score=130.57 Aligned_cols=99 Identities=21% Similarity=0.318 Sum_probs=84.6
Q ss_pred ccccCCCceee---cCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCC-------------------
Q 004935 251 FLTNQQDAYLW---QGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNN------------------- 308 (723)
Q Consensus 251 ~~~~~~~~~~w---~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N------------------- 308 (723)
+|....++|.| .||.|+.. .+++.|+|++|+|+|.||++|++|++|++|+|++|
T Consensus 59 ~W~~~~~~c~w~~~~GV~C~~~----~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~ 134 (636)
T 4eco_A 59 NWNFNKELDMWGAQPGVSLNSN----GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMS 134 (636)
T ss_dssp CCCCSSCGGGTTCCTTEEECTT----CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCC
T ss_pred CCCCCCCcccccCCCCeEEcCC----CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCch
Confidence 45566889999 99999743 48999999999999999999999999999999988
Q ss_pred -----------------------------------------------------------cCcCCCCccCCCCCCCcEEEc
Q 004935 309 -----------------------------------------------------------NLTGPVPDFLSQLPFLTELNL 329 (723)
Q Consensus 309 -----------------------------------------------------------~l~g~iP~~l~~l~~L~~l~l 329 (723)
+|+| ||..++++++|++|+|
T Consensus 135 ~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~L 213 (636)
T 4eco_A 135 DEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYM 213 (636)
T ss_dssp HHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEE
T ss_pred HHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEEC
Confidence 5567 9999999999999999
Q ss_pred cCCCCCCc-----------------hhhccc--Cc---cccccCCCC
Q 004935 330 KGTIPNGL-----------------IEKQKN--GL---LSLSVEGNP 354 (723)
Q Consensus 330 ~~n~~~g~-----------------~p~~~~--~~---~~l~~~~n~ 354 (723)
++|.++|. +|..+. ++ ..+.+.+|.
T Consensus 214 s~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~ 260 (636)
T 4eco_A 214 GNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP 260 (636)
T ss_dssp ESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT
T ss_pred cCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc
Confidence 99999996 888766 44 345556654
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.95 E-value=1.1e-09 Score=106.26 Aligned_cols=84 Identities=24% Similarity=0.301 Sum_probs=57.8
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|+|++.+|..|+++++|+.|+|++|+|++..|..+..+++|+.|+|++|.+++.+|..+. .+..+.+
T Consensus 54 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 133 (192)
T 1w8a_A 54 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNL 133 (192)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEe
Confidence 4677777777777777777777777777777777777777776677777777777777777776665544 3344556
Q ss_pred CCCCCCC
Q 004935 351 EGNPDLC 357 (723)
Q Consensus 351 ~~n~~lc 357 (723)
.+|+-.|
T Consensus 134 ~~N~l~c 140 (192)
T 1w8a_A 134 ASNPFNC 140 (192)
T ss_dssp TTCCBCC
T ss_pred CCCCccC
Confidence 6666544
No 266
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.95 E-value=9.2e-10 Score=109.30 Aligned_cols=127 Identities=18% Similarity=0.185 Sum_probs=92.1
Q ss_pred EEEEcCCCCCcch--hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 223 FSINTTESSTLPP--ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 223 lsl~~~~~s~lPp--~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
+.+..+.-..+++ .+..+..++.+.+..+....-.+..+ ...++|+.|+|++|+|++..|..|+.|++|
T Consensus 37 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~---------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 107 (220)
T 2v70_A 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAF---------EGASGVNEILLTSNRLENVQHKMFKGLESL 107 (220)
T ss_dssp EECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTT---------TTCTTCCEEECCSSCCCCCCGGGGTTCSSC
T ss_pred EEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHh---------CCCCCCCEEECCCCccCccCHhHhcCCcCC
Confidence 4444433334432 35666666766655443322111111 123689999999999998888889999999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
+.|+|++|+|++..|..+..+++|+.|+|++|.+++..|..+. ++..+.+.+|+-.|.
T Consensus 108 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 108 KTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9999999999999999999999999999999999998887665 345567788876663
No 267
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=8.7e-10 Score=130.67 Aligned_cols=121 Identities=11% Similarity=0.080 Sum_probs=76.7
Q ss_pred cchhhhhhhhhhhhccccccccCC-CceeecCc--------cCCCCC-CCCCceEEEEcCCCcccccCcccccCCCCCCe
Q 004935 233 LPPILNAYEIYRAKEFLQFLTNQQ-DAYLWQGL--------NCSYPE-YDPPRITSLNLSSSGIAGDIAPYISTLTSIQI 302 (723)
Q Consensus 233 lPp~inale~~~~~~~~~~~~~~~-~~~~w~g~--------~c~~~~-~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~ 302 (723)
+|+.+..+..++.+.+..+...+. .+..|... ...... ...++|+.|+|++|++.|.+|..|++|++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 788888888888887776655541 11122110 011000 02356788888888888888888888888888
Q ss_pred eeCcCCc-CcC-CCCccCCCCC-------CCcEEEccCCCCCCchhh--ccc---CccccccCCCC
Q 004935 303 LDLSNNN-LTG-PVPDFLSQLP-------FLTELNLKGTIPNGLIEK--QKN---GLLSLSVEGNP 354 (723)
Q Consensus 303 L~ls~N~-l~g-~iP~~l~~l~-------~L~~l~l~~n~~~g~~p~--~~~---~~~~l~~~~n~ 354 (723)
|+|++|+ |+| .||..+++++ +|+.|+|++|.++ .+|. .+. ++..|.+.+|.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~ 584 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNK 584 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSC
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCC
Confidence 8888887 777 7777665554 7777788777777 6666 443 33344455553
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.91 E-value=3.3e-09 Score=112.12 Aligned_cols=116 Identities=14% Similarity=0.152 Sum_probs=77.9
Q ss_pred EEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCC
Q 004935 222 EFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQ 301 (723)
Q Consensus 222 ~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~ 301 (723)
.+.+..+.-..+|..+..+..++.+.+..+...+ .+..+ ...++|+.|+|++|++.|.+|..++.+++|+
T Consensus 187 ~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l---------~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 187 SLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAI---------HHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGG---------GGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred EEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-Cchhh---------ccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 3555554444677777777666666654443322 11111 1125678888888888888888888888888
Q ss_pred eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCccc
Q 004935 302 ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGLLS 347 (723)
Q Consensus 302 ~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~~~ 347 (723)
.|+|++|++.|.+|..++++++|+.|+|++|.+.|.+|..+..+..
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 8888888888888887888888888888888888888777665443
No 269
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.90 E-value=1.8e-09 Score=114.99 Aligned_cols=100 Identities=23% Similarity=0.254 Sum_probs=82.0
Q ss_pred eeecCccCCCC-C-------CCCCceEEEEcCC-CcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEc
Q 004935 259 YLWQGLNCSYP-E-------YDPPRITSLNLSS-SGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL 329 (723)
Q Consensus 259 ~~w~g~~c~~~-~-------~~~~~l~~l~ls~-n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l 329 (723)
|.|..+.|+.. . ....+|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|++|++|+.|+|
T Consensus 8 C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred ccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 66777777754 1 1224699999996 9999888889999999999999999999999999999999999999
Q ss_pred cCCCCCCchhhccc--CccccccCCCCCCCC
Q 004935 330 KGTIPNGLIEKQKN--GLLSLSVEGNPDLCP 358 (723)
Q Consensus 330 ~~n~~~g~~p~~~~--~~~~l~~~~n~~lc~ 358 (723)
++|.+++..+..+. .+..|.+.+|+-.|.
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 99999986655443 256677888887763
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.88 E-value=1.4e-09 Score=114.96 Aligned_cols=122 Identities=15% Similarity=0.125 Sum_probs=60.2
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeec----------------------CccCCCC-CCCCCce
Q 004935 220 KIEFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQ----------------------GLNCSYP-EYDPPRI 276 (723)
Q Consensus 220 ~~~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~----------------------g~~c~~~-~~~~~~l 276 (723)
...+.+..+.-..+|+.+..+..++.+.+..+...+..+..+. .+..-.. -...++|
T Consensus 129 L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L 208 (328)
T 4fcg_A 129 LETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNL 208 (328)
T ss_dssp CSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTC
T ss_pred CCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCC
Confidence 4456666655557777777777777776655433333321111 1100000 0012345
Q ss_pred EEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcc
Q 004935 277 TSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQK 342 (723)
Q Consensus 277 ~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~ 342 (723)
+.|+|++|++++ +|+.++++++|+.|+|++|++.|.+|..++++++|+.|+|++|.+.+.+|..+
T Consensus 209 ~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 209 KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTG
T ss_pred CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhh
Confidence 555555555553 44445555555555555555555555555555555555555555555555433
No 271
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=1.1e-09 Score=129.71 Aligned_cols=89 Identities=17% Similarity=0.290 Sum_probs=76.6
Q ss_pred cCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeC-cCCcCcCC---------------------------
Q 004935 262 QGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDL-SNNNLTGP--------------------------- 313 (723)
Q Consensus 262 ~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~l-s~N~l~g~--------------------------- 313 (723)
.|+.|+. ..+++.|+|++|+|+|.||++|++|++|+.|+| ++|+|+|.
T Consensus 315 ~GV~C~~----~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~ 390 (876)
T 4ecn_A 315 PGVDLDN----NGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKM 390 (876)
T ss_dssp TTEEECT----TSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHH
T ss_pred CceEecC----CCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhh
Confidence 9999974 258999999999999999999999999999999 88877776
Q ss_pred -------------------------------------------------CCccCCCCCCCcEEEccCCCCCC--------
Q 004935 314 -------------------------------------------------VPDFLSQLPFLTELNLKGTIPNG-------- 336 (723)
Q Consensus 314 -------------------------------------------------iP~~l~~l~~L~~l~l~~n~~~g-------- 336 (723)
||..+++|++|+.|+|++|.++|
T Consensus 391 ~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~ 470 (876)
T 4ecn_A 391 FLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWE 470 (876)
T ss_dssp HTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCS
T ss_pred hhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccc
Confidence 89999999999999999999999
Q ss_pred ---------chhhccc--C---ccccccCCCC
Q 004935 337 ---------LIEKQKN--G---LLSLSVEGNP 354 (723)
Q Consensus 337 ---------~~p~~~~--~---~~~l~~~~n~ 354 (723)
.+|..+. + +..|.+.+|.
T Consensus 471 ~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 471 DANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred ccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 4887764 3 3445555653
No 272
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.88 E-value=2.1e-09 Score=106.64 Aligned_cols=127 Identities=19% Similarity=0.272 Sum_probs=90.5
Q ss_pred EEEEEcCCCCCcch-hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcc-cccCCCC
Q 004935 222 EFSINTTESSTLPP-ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAP-YISTLTS 299 (723)
Q Consensus 222 ~lsl~~~~~s~lPp-~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~-~~~~l~~ 299 (723)
.+.+..+.-..+|+ .+..+..++.+.+..+....-.+..+. ..++|+.|+|++|+|++ ||+ .|..|++
T Consensus 36 ~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~---------~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~ 105 (220)
T 2v9t_B 36 EIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQ---------GLRSLNSLVLYGNKITE-LPKSLFEGLFS 105 (220)
T ss_dssp EEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTT---------TCSSCCEEECCSSCCCC-CCTTTTTTCTT
T ss_pred EEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhh---------CCcCCCEEECCCCcCCc-cCHhHccCCCC
Confidence 34554444444544 566667777776654433322221121 23689999999999994 554 4789999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
|+.|+|++|+|++..|..+..+++|+.|+|++|.+++..+..+. .+..+.+.+|+..|.
T Consensus 106 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 106 LQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999999999998899999999999999999999987776544 445677888887663
No 273
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.87 E-value=4.2e-09 Score=105.18 Aligned_cols=104 Identities=19% Similarity=0.093 Sum_probs=84.5
Q ss_pred ccccCCCceeecCccCCCCC------CCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCC
Q 004935 251 FLTNQQDAYLWQGLNCSYPE------YDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFL 324 (723)
Q Consensus 251 ~~~~~~~~~~w~g~~c~~~~------~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L 324 (723)
.+..+...|+|.++.|+... ..+++|+.|+|++|++++..|..|+++++|+.|+|++|+|++..+..+..+++|
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 90 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90 (229)
T ss_dssp CCCCTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred ccCCCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc
Confidence 34566778999999998642 245789999999999999889999999999999999999976555678999999
Q ss_pred cEEEccCCCCCCchhhccc---CccccccCCCC
Q 004935 325 TELNLKGTIPNGLIEKQKN---GLLSLSVEGNP 354 (723)
Q Consensus 325 ~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~ 354 (723)
+.|+|++|.+++..+..+. .+..|.+.+|.
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 123 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK 123 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCc
Confidence 9999999999987665443 44455566653
No 274
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.86 E-value=4.5e-09 Score=100.16 Aligned_cols=86 Identities=22% Similarity=0.252 Sum_probs=72.8
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Cccccc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLS 349 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~ 349 (723)
++.|+.|+|++|+|++.+|..|++|++|+.|+|++|+|++..|..+.++++|+.|+|++|.+++..+..+. ++..+.
T Consensus 32 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 32 PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 46899999999999998899999999999999999999986566678999999999999999987665444 455677
Q ss_pred cCCCCCCCC
Q 004935 350 VEGNPDLCP 358 (723)
Q Consensus 350 ~~~n~~lc~ 358 (723)
+.+|+-.|.
T Consensus 112 L~~N~~~c~ 120 (174)
T 2r9u_A 112 LYNNPWDCE 120 (174)
T ss_dssp CCSSCBCTT
T ss_pred eCCCCcccc
Confidence 888887663
No 275
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.86 E-value=3.2e-09 Score=102.97 Aligned_cols=111 Identities=18% Similarity=0.180 Sum_probs=87.9
Q ss_pred EEEEEcCCCCCcchh--hhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 222 EFSINTTESSTLPPI--LNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 222 ~lsl~~~~~s~lPp~--inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
.+.+..+.-+.+|+. +..+..++.+.+..+...+..+..+. ..++|+.|+|++|+|++..|..|+.+++
T Consensus 33 ~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 103 (192)
T 1w8a_A 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE---------GASHIQELQLGENKIKEISNKMFLGLHQ 103 (192)
T ss_dssp EEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT---------TCTTCCEEECCSCCCCEECSSSSTTCTT
T ss_pred EEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcC---------CcccCCEEECCCCcCCccCHHHhcCCCC
Confidence 455555555566653 77888888887765544333222111 2368999999999999999989999999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhc
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQ 341 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~ 341 (723)
|+.|+|++|+|++.+|..+..+++|+.|+|++|.+++..+..
T Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 145 (192)
T 1w8a_A 104 LKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145 (192)
T ss_dssp CCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH
T ss_pred CCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch
Confidence 999999999999999999999999999999999999887643
No 276
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.85 E-value=4.5e-09 Score=104.99 Aligned_cols=127 Identities=16% Similarity=0.168 Sum_probs=92.0
Q ss_pred EEEEEcCCCCC-cchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 222 EFSINTTESST-LPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 222 ~lsl~~~~~s~-lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
.+.|..+.-.. .|..+..+..++.+.+..+....-.+..+ ...++|+.|+|++|+|++..+..|+.|++|
T Consensus 44 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~---------~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 114 (229)
T 3e6j_A 44 ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF---------DSLTQLTVLDLGTNQLTVLPSAVFDRLVHL 114 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT---------TTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred EEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc---------ccCCCcCEEECCCCcCCccChhHhCcchhh
Confidence 35555533333 35567777777777765543322111101 124689999999999997666678999999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
+.|+|++|+|+ .||..+..+++|+.|+|++|.+++..+..+. .+..+.+.+|+..|.
T Consensus 115 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 115 KELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 99999999999 8999999999999999999999987665443 455677888887764
No 277
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.81 E-value=9e-09 Score=99.88 Aligned_cols=85 Identities=28% Similarity=0.290 Sum_probs=70.9
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|+|++..|..|++|++|+.|+|++|+|++..|..+..+++|+.|+|++|.+++..+..+. .+..+.+
T Consensus 54 ~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 133 (193)
T 2wfh_A 54 KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 133 (193)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEe
Confidence 4788999999999987778899999999999999999988888899999999999999999876654443 4556778
Q ss_pred CCCCCCCC
Q 004935 351 EGNPDLCP 358 (723)
Q Consensus 351 ~~n~~lc~ 358 (723)
.+|+..|.
T Consensus 134 ~~N~~~C~ 141 (193)
T 2wfh_A 134 GANPLYCD 141 (193)
T ss_dssp CSSCEECS
T ss_pred CCCCeecC
Confidence 88887663
No 278
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.78 E-value=4.6e-09 Score=107.02 Aligned_cols=81 Identities=7% Similarity=0.018 Sum_probs=66.3
Q ss_pred hhhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhcc-CCceeeEEEEEecCCceEEEEEeCCCCCHH
Q 004935 431 ERVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 509 (723)
...++.|+.+.||+....++.+++|+...........+.+|+++++.+. |..+.++++++...+..++||||+++.+|.
T Consensus 19 ~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 19 VKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp EECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred EeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 4567778889999998888899999987532122346889999999994 677888999999888999999999999998
Q ss_pred HH
Q 004935 510 AL 511 (723)
Q Consensus 510 ~~ 511 (723)
+.
T Consensus 99 ~~ 100 (263)
T 3tm0_A 99 EE 100 (263)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 279
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.76 E-value=1.5e-08 Score=102.61 Aligned_cols=86 Identities=19% Similarity=0.216 Sum_probs=66.4
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Cccccc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLS 349 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~ 349 (723)
.++|+.|+|++|+|++..|..++.+++|+.|+|++|+|++..|..++.+++|+.|+|++|.+++..+..+. .+..+.
T Consensus 106 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 185 (251)
T 3m19_A 106 LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTIT 185 (251)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEE
Confidence 35788888888888865555678888888888888888876666788888888888888888877665443 445667
Q ss_pred cCCCCCCCC
Q 004935 350 VEGNPDLCP 358 (723)
Q Consensus 350 ~~~n~~lc~ 358 (723)
+.+|+-.|.
T Consensus 186 l~~N~~~c~ 194 (251)
T 3m19_A 186 LFGNQFDCS 194 (251)
T ss_dssp CCSCCBCTT
T ss_pred eeCCceeCC
Confidence 778876663
No 280
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.73 E-value=1.5e-08 Score=100.39 Aligned_cols=112 Identities=15% Similarity=0.109 Sum_probs=87.6
Q ss_pred eEEEEEEcCCCCCcch-hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCC
Q 004935 220 KIEFSINTTESSTLPP-ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLT 298 (723)
Q Consensus 220 ~~~lsl~~~~~s~lPp-~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~ 298 (723)
...+.+..+.-..+|+ .+..+..++.+.+..+....-.+..+. ..++|+.|+|++|+|++..|..|+.|+
T Consensus 59 L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 129 (220)
T 2v70_A 59 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFK---------GLESLKTLMLRSNRITCVGNDSFIGLS 129 (220)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGT---------TCSSCCEEECTTSCCCCBCTTSSTTCT
T ss_pred CCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhc---------CCcCCCEEECCCCcCCeECHhHcCCCc
Confidence 3446665544445554 677777788777765544433322222 236899999999999999999999999
Q ss_pred CCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 299 SIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 299 ~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
+|+.|+|++|+|++..|..+..+++|+.|+|++|.+++..+.
T Consensus 130 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 130 SVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred cCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 999999999999999999999999999999999999987654
No 281
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.72 E-value=2.5e-08 Score=95.10 Aligned_cols=95 Identities=22% Similarity=0.205 Sum_probs=72.8
Q ss_pred eeecCccCCCCC------CCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC
Q 004935 259 YLWQGLNCSYPE------YDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 259 ~~w~g~~c~~~~------~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n 332 (723)
|.|.++.|+..+ ..++.|+.|+|++|++++..+..++++++|+.|+|++|+|++..|..++.+++|+.|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 678888887532 23468899999999998655566789999999999999998766677788999999999999
Q ss_pred CCCCchhhccc---CccccccCCC
Q 004935 333 IPNGLIEKQKN---GLLSLSVEGN 353 (723)
Q Consensus 333 ~~~g~~p~~~~---~~~~l~~~~n 353 (723)
.+++..+..+. .+..+.+.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N 110 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTN 110 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CccccCHHHhhCCcccCEEECcCC
Confidence 98877665433 4445566666
No 282
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.72 E-value=3.2e-08 Score=97.01 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=85.9
Q ss_pred EEEEcCCCCCcch-hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCC
Q 004935 223 FSINTTESSTLPP-ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQ 301 (723)
Q Consensus 223 lsl~~~~~s~lPp-~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~ 301 (723)
+.+....-..+|+ .+..+..++.+.+..+....-.+.. -...++|+.|+|++|++++..+..++++++|+
T Consensus 33 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 103 (208)
T 2o6s_A 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV---------FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLK 103 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT---------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEcCCCccCcCChhhhcccccCcEEECCCCccCccChhh---------cCCCCCcCEEECCCCcCCccCHhHhcCccCCC
Confidence 4444433334444 4566777777766544222111100 01236899999999999965556689999999
Q ss_pred eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCC
Q 004935 302 ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLC 357 (723)
Q Consensus 302 ~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc 357 (723)
.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. ++..+.+.+|+..|
T Consensus 104 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 104 ELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred EEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 999999999977777788999999999999998876664433 45566777887655
No 283
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.71 E-value=3e-08 Score=96.18 Aligned_cols=95 Identities=24% Similarity=0.276 Sum_probs=78.5
Q ss_pred eeecCccCCCC------CCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC
Q 004935 259 YLWQGLNCSYP------EYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 259 ~~w~g~~c~~~------~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n 332 (723)
|.|..+.|+.. ...++.|+.|+|++|+|+ .||..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45566666643 224568999999999998 89999999999999999999999988889999999999999999
Q ss_pred CCCCchhhcccC---ccccccCCCC
Q 004935 333 IPNGLIEKQKNG---LLSLSVEGNP 354 (723)
Q Consensus 333 ~~~g~~p~~~~~---~~~l~~~~n~ 354 (723)
.+++..|..+.+ +..+.+.+|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~ 113 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGND 113 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCC
Confidence 999988766553 4455666664
No 284
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.71 E-value=3e-08 Score=101.64 Aligned_cols=129 Identities=17% Similarity=0.177 Sum_probs=88.9
Q ss_pred EEEEEEcCCCCCcch-hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 221 IEFSINTTESSTLPP-ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 221 ~~lsl~~~~~s~lPp-~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
..+.+..+.-..+|+ .+..+..++.+.+..+......+.. -...++|+.|+|++|++++..|..++.+++
T Consensus 88 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 158 (272)
T 3rfs_A 88 TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGV---------FDKLTNLTYLNLAHNQLQSLPKGVFDKLTN 158 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT---------TTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHH---------hccCCCCCEEECCCCccCccCHHHhccCcc
Confidence 345555533334444 3566777777666544322211100 012367999999999999766677899999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
|+.|+|++|++++..|..++.+++|+.|+|++|.+++..|..+. .+..+.+.+|+..|.
T Consensus 159 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 99999999999987777788999999999999999987775443 455667788876654
No 285
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.69 E-value=4.1e-08 Score=93.58 Aligned_cols=84 Identities=25% Similarity=0.282 Sum_probs=50.1
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|+|++..+..++.+++|+.|+|++|+|++..|..+.++++|+.|+|++|.+++..+..+. .+..+.+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 131 (177)
T 2o6r_A 52 TQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWL 131 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEe
Confidence 4566667777766644444466667777777777777665555566666777777776666654443222 3344455
Q ss_pred CCCCCCC
Q 004935 351 EGNPDLC 357 (723)
Q Consensus 351 ~~n~~lc 357 (723)
.+|+-.|
T Consensus 132 ~~N~~~~ 138 (177)
T 2o6r_A 132 HTNPWDC 138 (177)
T ss_dssp CSSCBCC
T ss_pred cCCCeec
Confidence 5555433
No 286
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.68 E-value=3.8e-08 Score=101.96 Aligned_cols=129 Identities=19% Similarity=0.128 Sum_probs=90.4
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 220 KIEFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 220 ~~~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
...+.+..+.-..+|..+..+..++.+.+..+....-.+..+. ..++|+.|+|++|+|++..|..|..+++
T Consensus 79 L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 149 (290)
T 1p9a_G 79 LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR---------GLGELQELYLKGNELKTLPPGLLTPTPK 149 (290)
T ss_dssp CCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTT---------TCTTCCEEECTTSCCCCCCTTTTTTCTT
T ss_pred CCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHc---------CCCCCCEEECCCCCCCccChhhcccccC
Confidence 3345555555557787777777777776655433322211111 2357999999999999766666889999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
|+.|+|++|+|++..+..+.++++|+.|+|++|.++. +|..+. .+..+.+.+|+..|.
T Consensus 150 L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 150 LEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCc
Confidence 9999999999996555567889999999999999884 555443 344567788888774
No 287
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.67 E-value=2.2e-08 Score=115.16 Aligned_cols=86 Identities=21% Similarity=0.158 Sum_probs=78.4
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc----Ccccc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN----GLLSL 348 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~----~~~~l 348 (723)
.++|+.|+|++|+|++.+|..|++|++|+.|+|++|+|++..|..+..+++|+.|+|++|.+++..|..+. .+..+
T Consensus 493 l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE
T ss_pred ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999888764 34567
Q ss_pred ccCCCCCCCC
Q 004935 349 SVEGNPDLCP 358 (723)
Q Consensus 349 ~~~~n~~lc~ 358 (723)
..++||..|.
T Consensus 573 ~L~~Np~~C~ 582 (635)
T 4g8a_A 573 NLTQNDFACT 582 (635)
T ss_dssp ECTTCCBCCS
T ss_pred EeeCCCCccc
Confidence 8899999884
No 288
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.64 E-value=3e-08 Score=109.42 Aligned_cols=129 Identities=19% Similarity=0.209 Sum_probs=92.1
Q ss_pred EEEEEEcCC-CCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 221 IEFSINTTE-SSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 221 ~~lsl~~~~-~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
..+.+..+. .+.+|..+..+..++.+.+..+...+..+..+. ..++|+.|+|++|++++..|..++++++
T Consensus 278 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~---------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 278 KTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFW---------GLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT---------TCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred eEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhc---------CcccCCEEECCCCccCCcChhHhcCccc
Confidence 345555422 233455666777777776654433322221111 2368999999999998888889999999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
|+.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. .+..+.+.+|+-.|.
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 99999999999998899999999999999999999886654433 456677888887664
No 289
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.64 E-value=3.6e-08 Score=101.69 Aligned_cols=128 Identities=18% Similarity=0.145 Sum_probs=88.8
Q ss_pred EEEEEcCCCCCc-chhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 222 EFSINTTESSTL-PPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 222 ~lsl~~~~~s~l-Pp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
.+.+..+.-..+ |..+..+..++.+.+..+....-.+.. -...++|+.|+|++|++++..+..++.+++|
T Consensus 109 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 179 (285)
T 1ozn_A 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT---------FRDLGNLTHLFLHGNRISSVPERAFRGLHSL 179 (285)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---------TTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred EEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhH---------hccCCCccEEECCCCcccccCHHHhcCcccc
Confidence 344444332333 445666666666665443222111100 1124689999999999997666679999999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCCCCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNPDLCP 358 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~~lc~ 358 (723)
+.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. .+..+.+.+|+..|.
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred CEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 9999999999999999999999999999999999987665444 445677788876663
No 290
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.63 E-value=5.9e-08 Score=95.05 Aligned_cols=96 Identities=23% Similarity=0.210 Sum_probs=73.7
Q ss_pred ceeecCccCCCCC------CCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccC
Q 004935 258 AYLWQGLNCSYPE------YDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKG 331 (723)
Q Consensus 258 ~~~w~g~~c~~~~------~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~ 331 (723)
.|.|.++.|+..+ ..+++|+.|+|++|++++..+..++.+++|+.|+|++|+|++..+..+..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 3789999997532 2346799999999999966556688999999999999999976666778899999999999
Q ss_pred CCCCCchhhccc---CccccccCCC
Q 004935 332 TIPNGLIEKQKN---GLLSLSVEGN 353 (723)
Q Consensus 332 n~~~g~~p~~~~---~~~~l~~~~n 353 (723)
|.+++..+..+. .+..+.+.+|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N 110 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTN 110 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcCCccCHhHhcCccCCCEEEcCCC
Confidence 998876654433 4445555555
No 291
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.63 E-value=4.8e-08 Score=92.58 Aligned_cols=66 Identities=21% Similarity=0.188 Sum_probs=59.5
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++|+.|+|++|+|++..|..|+.|++|++|+|++|+|++..|..+.++++|+.|+|++|.++...+
T Consensus 54 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 54 TQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 589999999999996666668999999999999999998777789999999999999999987654
No 292
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.62 E-value=3.1e-08 Score=115.89 Aligned_cols=112 Identities=11% Similarity=0.072 Sum_probs=91.3
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 220 KIEFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 220 ~~~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
...|.|..+.-..+|+.+..+..++.|.+..+... ..+..+.+ .++|+.|+|++|.|+ .||..|++|++
T Consensus 226 L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~---------l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 294 (727)
T 4b8c_D 226 WHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKN---------LSNLRVLDLSHNRLT-SLPAELGSCFQ 294 (727)
T ss_dssp CCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGG---------GTTCCEEECTTSCCS-SCCSSGGGGTT
T ss_pred CcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhC---------CCCCCEEeCcCCcCC-ccChhhcCCCC
Confidence 34466666666678888888888888887666444 33322211 257999999999999 89999999999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN 343 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~ 343 (723)
|+.|+|++|+|+ .||..|++|++|+.|+|++|.++|.+|..+.
T Consensus 295 L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 295 LKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp CSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred CCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 999999999997 8999999999999999999999999987764
No 293
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.61 E-value=6.3e-08 Score=95.91 Aligned_cols=81 Identities=23% Similarity=0.168 Sum_probs=65.6
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccC---cccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG---LLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~---~~~l~~ 350 (723)
++|+.|+|++|++++..|..|++|++|+.|+|++|+|++..+..+..+++|+.|+|++|.+++..|..+.. +..+.+
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 57899999999999888899999999999999999999555555788999999999999999887766543 444556
Q ss_pred CCCC
Q 004935 351 EGNP 354 (723)
Q Consensus 351 ~~n~ 354 (723)
.+|.
T Consensus 136 ~~N~ 139 (220)
T 2v9t_B 136 YDNK 139 (220)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 6664
No 294
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.60 E-value=8.9e-08 Score=96.83 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=88.0
Q ss_pred EEEEEcCCCCCcc-hhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 222 EFSINTTESSTLP-PILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 222 ~lsl~~~~~s~lP-p~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
.+.+..+.-..++ ..+..+..++.+.+..+......+..+ ...++|+.|+|++|+|++..|..|+.+++|
T Consensus 39 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 109 (251)
T 3m19_A 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF---------DDLTELGTLGLANNQLASLPLGVFDHLTQL 109 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT---------TTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred EEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh---------ccCCcCCEEECCCCcccccChhHhcccCCC
Confidence 3555553333343 457777777777765543333221111 123689999999999997777788999999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNP 354 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~ 354 (723)
+.|+|++|+|++..|..+..+++|+.|+|++|.+++..+..+. ++..+.+.+|.
T Consensus 110 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 110 DKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 9999999999977777789999999999999999987765544 44456666664
No 295
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.58 E-value=1.5e-08 Score=93.66 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=65.5
Q ss_pred CcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCc
Q 004935 232 TLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLT 311 (723)
Q Consensus 232 ~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~ 311 (723)
.+|+.+..+..++.+.+..+.... + ..-...++|+.|+|++|++++.+|..++.+++|+.|+|++|+++
T Consensus 33 ~~~~~~~~l~~L~~L~l~~n~l~~--------~---~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~ 101 (149)
T 2je0_A 33 KLEGLTDEFEELEFLSTINVGLTS--------I---ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101 (149)
T ss_dssp BCCSCCTTCTTCCEEECTTSCCCC--------C---TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCC
T ss_pred HHHHHHhhcCCCcEEECcCCCCCC--------c---hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCC
Confidence 566666666666666554332221 1 00112357888888888888778887788888888888888887
Q ss_pred C-CCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 312 G-PVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 312 g-~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
+ ..|..++.+++|+.|+|++|.+++..+
T Consensus 102 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 102 DLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp SHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred ChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 6 345777888888888888887776544
No 296
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.58 E-value=9.5e-08 Score=90.93 Aligned_cols=67 Identities=19% Similarity=0.167 Sum_probs=58.1
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
.++|+.|+|++|+|++-.+..|++|++|+.|+|++|+|++..|..+..+++|+.|+|++|.+....+
T Consensus 56 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 56 LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 3689999999999997444557999999999999999997666679999999999999999986543
No 297
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.55 E-value=5.4e-08 Score=110.41 Aligned_cols=78 Identities=27% Similarity=0.365 Sum_probs=60.1
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCch-hhcccC---ccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLI-EKQKNG---LLSLS 349 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~-p~~~~~---~~~l~ 349 (723)
++|+.|+|++|+|+ .||..|++|++|+.|+|++|+|++ || .+++|++|+.|+|++|.+++.+ |..+.. +..+.
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 46888888888888 788888888888888888888886 77 7888888888888888888876 666553 34455
Q ss_pred cCCCC
Q 004935 350 VEGNP 354 (723)
Q Consensus 350 ~~~n~ 354 (723)
+.+|+
T Consensus 540 L~~N~ 544 (567)
T 1dce_A 540 LQGNS 544 (567)
T ss_dssp CTTSG
T ss_pred ecCCc
Confidence 66664
No 298
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.55 E-value=9.7e-08 Score=97.70 Aligned_cols=62 Identities=24% Similarity=0.237 Sum_probs=26.6
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
+|+.|+|++|++++..+..|+.+++|+.|+|++|++++..|..+.++++|+.|+|++|.+++
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 44444444444443222234444444444444444444333334444444444444444443
No 299
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.55 E-value=1.6e-07 Score=96.06 Aligned_cols=123 Identities=17% Similarity=0.138 Sum_probs=82.2
Q ss_pred EEEEEcCCCCCcchh-hhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 222 EFSINTTESSTLPPI-LNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 222 ~lsl~~~~~s~lPp~-inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
.+.+..+.-..+|+. +..+..++.+.+..+....-.+.. -...++|+.|+|++|++++..|..|+.+++|
T Consensus 65 ~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 135 (270)
T 2o6q_A 65 LLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGV---------FDQLVNLAELRLDRNQLKSLPPRVFDSLTKL 135 (270)
T ss_dssp EEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTT---------TTTCSSCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred EEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhH---------cccccCCCEEECCCCccCeeCHHHhCcCcCC
Confidence 355544433445543 355666666655433222111100 0123579999999999998777788999999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGN 353 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n 353 (723)
+.|+|++|+|++..+..+..+++|+.|+|++|.+++..+..+. .+..+.+.+|
T Consensus 136 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 9999999999976666788999999999999988886665443 3445556666
No 300
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.54 E-value=1.6e-07 Score=91.26 Aligned_cols=121 Identities=19% Similarity=0.123 Sum_probs=73.2
Q ss_pred EEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCC
Q 004935 222 EFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQ 301 (723)
Q Consensus 222 ~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~ 301 (723)
.+.+..+.. +.++.+..+..++.+.+..+......+..+. ..++|+.|+|++|++++.+|..++.+++|+
T Consensus 70 ~L~l~~n~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~---------~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 70 DLTINNIHA-TNYNPISGLSNLERLRIMGKDVTSDKIPNLS---------GLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp EEEEESCCC-SCCGGGTTCTTCCEEEEECTTCBGGGSCCCT---------TCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred EEEccCCCC-CcchhhhcCCCCCEEEeECCccCcccChhhc---------CCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 355555422 2334555666666665544333221121111 235788888888888887888888888888
Q ss_pred eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhh-cccCccccccCCC
Q 004935 302 ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEK-QKNGLLSLSVEGN 353 (723)
Q Consensus 302 ~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~-~~~~~~~l~~~~n 353 (723)
.|+|++|++.+.+| .+..+++|+.|+|++|.+++..+. .+.++..+.+.+|
T Consensus 140 ~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 140 SIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC
T ss_pred EEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCc
Confidence 88888887555676 577888888888888887764321 1223444455555
No 301
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.54 E-value=5.8e-08 Score=91.62 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=76.2
Q ss_pred CCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcC
Q 004935 231 STLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNL 310 (723)
Q Consensus 231 s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l 310 (723)
+.+|..+..+..++.+.+..+..... ..-...++|+.|+|++|++++.+|..++++++|+.|+|++|++
T Consensus 39 ~~i~~~~~~l~~L~~L~l~~n~l~~~-----------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 107 (168)
T 2ell_A 39 GKIEGLTAEFVNLEFLSLINVGLISV-----------SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKL 107 (168)
T ss_dssp TBCSSCCGGGGGCCEEEEESSCCCCC-----------SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSC
T ss_pred hhHHHHHHhCCCCCEEeCcCCCCCCh-----------hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCcc
Confidence 36777777777777776654432221 0111346899999999999999999999999999999999999
Q ss_pred cCC-CCccCCCCCCCcEEEccCCCCCCchh
Q 004935 311 TGP-VPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 311 ~g~-iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++. .+..+..+++|+.|+|++|.+++..+
T Consensus 108 ~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 108 KDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred CcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 974 33789999999999999999987655
No 302
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.52 E-value=1.6e-07 Score=86.52 Aligned_cols=66 Identities=23% Similarity=0.266 Sum_probs=42.8
Q ss_pred CceEEEEcCCCccc-ccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhc
Q 004935 274 PRITSLNLSSSGIA-GDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQ 341 (723)
Q Consensus 274 ~~l~~l~ls~n~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~ 341 (723)
++++.|+|++|+++ |.+|..++.+++|+.|+|++|++++. ..++++++|+.|+|++|.+++.+|..
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~ 83 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVL 83 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHH
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHH
Confidence 45666666666666 66666666666666666666666654 55666666666666666666655544
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.50 E-value=8.1e-08 Score=110.17 Aligned_cols=84 Identities=23% Similarity=0.178 Sum_probs=59.3
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc----Cccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN----GLLSLS 349 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~----~~~~l~ 349 (723)
++|+.|+|++|++++.+|..+++|++|+.|+|++|++++.+|..++++++|+.|+|++|.++ .+|..+. .+..+.
T Consensus 473 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~ 551 (606)
T 3vq2_A 473 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFN 551 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEE
T ss_pred CCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEE
Confidence 56777777777777777777777777777777777777777777777777777777777777 3444332 244566
Q ss_pred cCCCCCCCC
Q 004935 350 VEGNPDLCP 358 (723)
Q Consensus 350 ~~~n~~lc~ 358 (723)
+.+|+..|.
T Consensus 552 l~~N~~~c~ 560 (606)
T 3vq2_A 552 LTNNSVACI 560 (606)
T ss_dssp CCSCCCCCS
T ss_pred ccCCCcccC
Confidence 777777664
No 304
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.50 E-value=9.4e-08 Score=96.77 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=56.3
Q ss_pred cccCcEEEEEEEEC-CceEEEEEecCCChhhHHHHHHHHHHHHhccCCce--eeEEEEEecCCceEEEEEeCCCCCHH
Q 004935 435 GNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL--TTLVGYCDEGTNRGLIYEFMANGNLQ 509 (723)
Q Consensus 435 G~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI--v~l~g~~~~~~~~~lV~Ey~~~gsL~ 509 (723)
+.|..+.||+.... +..+++|+..... ...+..|+++++.+++.++ .+++++....+..++||||+++.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 35566999999774 5679999976542 2457899999999965554 55888888888889999999998874
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.50 E-value=1e-07 Score=99.31 Aligned_cols=84 Identities=21% Similarity=0.163 Sum_probs=56.5
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccC----ccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG----LLSLS 349 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~----~~~l~ 349 (723)
++|+.|+|++|++++..|..++.+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++..|..+.. +..+.
T Consensus 175 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~ 254 (306)
T 2z66_A 175 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 254 (306)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEE
T ss_pred cCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEE
Confidence 46777777777777766777777777777777777777666666777777777777777777766654432 33455
Q ss_pred cCCCCCCC
Q 004935 350 VEGNPDLC 357 (723)
Q Consensus 350 ~~~n~~lc 357 (723)
+.+|+-.|
T Consensus 255 L~~N~~~~ 262 (306)
T 2z66_A 255 LTQNDFAC 262 (306)
T ss_dssp CTTCCEEC
T ss_pred ccCCCeec
Confidence 56665444
No 306
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.49 E-value=1.8e-07 Score=90.77 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=85.0
Q ss_pred EEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCC
Q 004935 222 EFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQ 301 (723)
Q Consensus 222 ~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~ 301 (723)
.+.+..+.-..+| .+..+..++.+.+..+ ...+...+ ...++|+.|+|++|++++..|..++.|++|+
T Consensus 48 ~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n--~~~~~~~l---------~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 48 YITLANINVTDLT-GIEYAHNIKDLTINNI--HATNYNPI---------SGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp EEEEESSCCSCCT-TGGGCTTCSEEEEESC--CCSCCGGG---------TTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred EEeccCCCccChH-HHhcCCCCCEEEccCC--CCCcchhh---------hcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 3455554444555 4666666676665544 11111111 1236899999999999999999999999999
Q ss_pred eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCC
Q 004935 302 ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGN 353 (723)
Q Consensus 302 ~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n 353 (723)
.|+|++|++++.+|..++++++|+.|+|++|...+.+| .+. .+..+.+.+|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFD 169 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTB
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCC
Confidence 99999999999999999999999999999998444444 232 3445555555
No 307
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.48 E-value=1.4e-07 Score=107.14 Aligned_cols=75 Identities=23% Similarity=0.310 Sum_probs=63.3
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccC
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVE 351 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~ 351 (723)
.|+.|+|++|+|++ ||. |++|++|+.|+|++|+|+ .||..+++|++|+.|+|++|.+++ +| .+. ++..|.++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999997 787 999999999999999999 899999999999999999999998 56 444 34455666
Q ss_pred CCC
Q 004935 352 GNP 354 (723)
Q Consensus 352 ~n~ 354 (723)
+|.
T Consensus 517 ~N~ 519 (567)
T 1dce_A 517 NNR 519 (567)
T ss_dssp SSC
T ss_pred CCC
Confidence 664
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.48 E-value=1.7e-07 Score=103.06 Aligned_cols=87 Identities=18% Similarity=0.144 Sum_probs=76.6
Q ss_pred CCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccc
Q 004935 272 DPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSL 348 (723)
Q Consensus 272 ~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l 348 (723)
..++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. .+..+
T Consensus 205 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 284 (440)
T 3zyj_A 205 PLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERI 284 (440)
T ss_dssp TCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEE
T ss_pred CCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEE
Confidence 346899999999999999899999999999999999999999999999999999999999999987665543 45667
Q ss_pred ccCCCCCCCC
Q 004935 349 SVEGNPDLCP 358 (723)
Q Consensus 349 ~~~~n~~lc~ 358 (723)
.+.+|+..|.
T Consensus 285 ~L~~Np~~Cd 294 (440)
T 3zyj_A 285 HLHHNPWNCN 294 (440)
T ss_dssp ECCSSCEECS
T ss_pred EcCCCCccCC
Confidence 8899998874
No 309
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.48 E-value=1.2e-07 Score=108.69 Aligned_cols=84 Identities=24% Similarity=0.237 Sum_probs=69.9
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|++++.+|..|+.+++|+.|+|++|++++.+|..+.++++| .|+|++|.+++..|..+. .+..+.+
T Consensus 476 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 554 (606)
T 3t6q_A 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINL 554 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEEC
T ss_pred CCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeC
Confidence 578889999999988888888999999999999999998888888888888 899999988887776543 5566778
Q ss_pred CCCCCCCC
Q 004935 351 EGNPDLCP 358 (723)
Q Consensus 351 ~~n~~lc~ 358 (723)
.+|+..|.
T Consensus 555 ~~N~~~c~ 562 (606)
T 3t6q_A 555 RQNPLDCT 562 (606)
T ss_dssp TTCCEECS
T ss_pred CCCCcccc
Confidence 88887663
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.47 E-value=1.8e-07 Score=103.20 Aligned_cols=87 Identities=21% Similarity=0.161 Sum_probs=76.5
Q ss_pred CCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccc
Q 004935 272 DPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSL 348 (723)
Q Consensus 272 ~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l 348 (723)
..++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+. ++..+
T Consensus 216 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 295 (452)
T 3zyi_A 216 PLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295 (452)
T ss_dssp TCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEE
T ss_pred ccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEE
Confidence 346899999999999999999999999999999999999999999999999999999999999977665443 45667
Q ss_pred ccCCCCCCCC
Q 004935 349 SVEGNPDLCP 358 (723)
Q Consensus 349 ~~~~n~~lc~ 358 (723)
.+.+|+..|.
T Consensus 296 ~L~~Np~~Cd 305 (452)
T 3zyi_A 296 HLHHNPWNCD 305 (452)
T ss_dssp ECCSSCEECS
T ss_pred EccCCCcCCC
Confidence 8899988774
No 311
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.47 E-value=4.7e-08 Score=116.76 Aligned_cols=84 Identities=20% Similarity=0.130 Sum_probs=76.0
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCccccccCC
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGLLSLSVEG 352 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~~~l~~~~ 352 (723)
.++|+.|+|++|+|++.+|..|+.|++|+.|+|++|+|++..|..+. ++|+.|+|++|.+++.+|..+.++..+.+.+
T Consensus 479 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~ 556 (844)
T 3j0a_A 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITH 556 (844)
T ss_dssp BCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEE
T ss_pred cccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecC
Confidence 47899999999999998888899999999999999999987776665 8999999999999999999888888889999
Q ss_pred CCCCCC
Q 004935 353 NPDLCP 358 (723)
Q Consensus 353 n~~lc~ 358 (723)
|+..|.
T Consensus 557 Np~~C~ 562 (844)
T 3j0a_A 557 NKFICE 562 (844)
T ss_dssp ECCCCS
T ss_pred CCcccc
Confidence 998883
No 312
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.47 E-value=1e-07 Score=101.97 Aligned_cols=127 Identities=19% Similarity=0.193 Sum_probs=80.2
Q ss_pred EEEEEcCCCCCcch-hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 222 EFSINTTESSTLPP-ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 222 ~lsl~~~~~s~lPp-~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
.|.|..+.-..+|+ .+..+..++.|.+..+....-.+..+ ...++|+.|+|++|+|++..|..|+.|++|
T Consensus 68 ~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---------~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 138 (361)
T 2xot_A 68 SLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLF---------SDLQALEVLLLYNNHIVVVDRNAFEDMAQL 138 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT---------TTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred EEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHh---------CCCcCCCEEECCCCcccEECHHHhCCcccC
Confidence 34554443344443 45666666666654443222111111 123578888888888888778888888888
Q ss_pred CeeeCcCCcCcCCCCcc-C---CCCCCCcEEEccCCCCCCchhhcccCc-----cccccCCCCCCCC
Q 004935 301 QILDLSNNNLTGPVPDF-L---SQLPFLTELNLKGTIPNGLIEKQKNGL-----LSLSVEGNPDLCP 358 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~-l---~~l~~L~~l~l~~n~~~g~~p~~~~~~-----~~l~~~~n~~lc~ 358 (723)
+.|+|++|+|++ +|.. + ..+++|+.|+|++|.+++..+..+..+ ..+.+.+|+..|.
T Consensus 139 ~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 139 QKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 888888888886 5544 3 568888888888888887554443332 3467778877663
No 313
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.47 E-value=3.3e-07 Score=93.77 Aligned_cols=111 Identities=19% Similarity=0.116 Sum_probs=79.5
Q ss_pred hhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCC
Q 004935 235 PILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPV 314 (723)
Q Consensus 235 p~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~i 314 (723)
+.+..+..++.+.+..+... ++.... -...++|+.|+|++|++++..|..++++++|+.|+|++|++++..
T Consensus 79 ~~l~~l~~L~~L~L~~n~l~--------~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 79 SALKELTNLTYLILTGNQLQ--------SLPNGV-FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLP 149 (272)
T ss_dssp GGGTTCTTCCEEECTTSCCC--------CCCTTT-TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred hhhcCCCCCCEEECCCCccC--------ccChhH-hcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccC
Confidence 35556666666665443222 221110 012368999999999999777777899999999999999999877
Q ss_pred CccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCC
Q 004935 315 PDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNP 354 (723)
Q Consensus 315 P~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~ 354 (723)
|..++.+++|+.|+|++|.+++..+..+. .+..+.+.+|.
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 77889999999999999999987765443 44555666664
No 314
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.46 E-value=1.2e-07 Score=107.80 Aligned_cols=86 Identities=19% Similarity=0.269 Sum_probs=63.0
Q ss_pred CCceEEEEcCCCccc-ccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccc
Q 004935 273 PPRITSLNLSSSGIA-GDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSL 348 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l 348 (723)
.++|+.|+|++|.++ |.+|..++.+++|+.|+|++|++++.+|..++++++|+.|+|++|.+++..|..+. .+..+
T Consensus 444 l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 523 (570)
T 2z63_A 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKI 523 (570)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEE
Confidence 357778888888877 67777788888888888888888877777788888888888888887776665443 34455
Q ss_pred ccCCCCCCCC
Q 004935 349 SVEGNPDLCP 358 (723)
Q Consensus 349 ~~~~n~~lc~ 358 (723)
.+.+|+-.|.
T Consensus 524 ~l~~N~~~~~ 533 (570)
T 2z63_A 524 WLHTNPWDCS 533 (570)
T ss_dssp ECCSSCBCCC
T ss_pred EecCCcccCC
Confidence 6677766553
No 315
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.45 E-value=1.6e-07 Score=99.67 Aligned_cols=97 Identities=18% Similarity=0.066 Sum_probs=72.3
Q ss_pred Ccchhhhhhhhhhhhcccc-ccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcC
Q 004935 232 TLPPILNAYEIYRAKEFLQ-FLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNL 310 (723)
Q Consensus 232 ~lPp~inale~~~~~~~~~-~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l 310 (723)
.+|+ |..+..++.|.+.. +...+-.+..+. ..++|+.|+|++|+|+|..|..|++|++|+.|+|++|+|
T Consensus 23 ~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~---------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 92 (347)
T 2ifg_A 23 SLHH-LPGAENLTELYIENQQHLQHLELRDLR---------GLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (347)
T ss_dssp TTTT-SCSCSCCSEEECCSCSSCCEECGGGSC---------SCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred ccCC-CCCCCCeeEEEccCCCCCCCcChhHhc---------cccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcc
Confidence 4676 77777677776653 333322221121 236899999999999999999999999999999999999
Q ss_pred cCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 311 TGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 311 ~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++..|..+..++ |+.|+|++|.+.....
T Consensus 93 ~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 93 ESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred ceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 975555555555 9999999999986543
No 316
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.45 E-value=8.2e-08 Score=112.35 Aligned_cols=109 Identities=21% Similarity=0.234 Sum_probs=80.4
Q ss_pred cchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcC
Q 004935 233 LPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTG 312 (723)
Q Consensus 233 lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g 312 (723)
.|..+..+..++.|.+..+... ..+..+. ..++|+.|+|++|.|+ .||+.|++|++|++|+|++|+|+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---------~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIF---------KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGG---------GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhc---------CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 4556666777777776554333 2221111 2357999999999999 99999999999999999999999
Q ss_pred CCCccCCCCCCCcEEEccCCCCCCchhhcccC---ccccccCCCC
Q 004935 313 PVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG---LLSLSVEGNP 354 (723)
Q Consensus 313 ~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~---~~~l~~~~n~ 354 (723)
.||..+++|++|+.|+|++|.++ .+|..+.. +..|.+.+|.
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 89999999999999999999997 67776654 4455666665
No 317
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.41 E-value=2.7e-07 Score=98.67 Aligned_cols=122 Identities=16% Similarity=0.117 Sum_probs=78.8
Q ss_pred EEEEcCCCCCcchh-hh-hhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 223 FSINTTESSTLPPI-LN-AYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 223 lsl~~~~~s~lPp~-in-ale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
|.|..+.-..+|+. +. .+..++.+.+..+....-.+..+ ...++|+.|+|++|+|++..+..|..|++|
T Consensus 44 L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~---------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 114 (361)
T 2xot_A 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF---------VPVPNLRYLDLSSNHLHTLDEFLFSDLQAL 114 (361)
T ss_dssp EECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT---------TTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred EECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc---------cCCCCCCEEECCCCcCCcCCHHHhCCCcCC
Confidence 44444333444443 22 55666666654443222111111 123578899999999887666778889999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcc------cCccccccCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQK------NGLLSLSVEGN 353 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~------~~~~~l~~~~n 353 (723)
+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+ ..+..|.+.+|
T Consensus 115 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 115 EVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 999999999988888888889999999999988887544332 23444555555
No 318
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.41 E-value=2.2e-07 Score=87.59 Aligned_cols=80 Identities=25% Similarity=0.361 Sum_probs=57.1
Q ss_pred CCCceEEEEcCCCccc-ccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Cccc
Q 004935 272 DPPRITSLNLSSSGIA-GDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLS 347 (723)
Q Consensus 272 ~~~~l~~l~ls~n~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~ 347 (723)
.+++|+.|+|++|+++ |.||..++.+++|+.|+|++|++++. ..++.+++|+.|+|++|.+++.+|..+. .+..
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3457788888888887 77877778888888888888887765 6677778888888888887776555432 4444
Q ss_pred cccCCC
Q 004935 348 LSVEGN 353 (723)
Q Consensus 348 l~~~~n 353 (723)
+.+.+|
T Consensus 100 L~Ls~N 105 (168)
T 2ell_A 100 LNLSGN 105 (168)
T ss_dssp EECBSS
T ss_pred EeccCC
Confidence 555555
No 319
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.39 E-value=3e-07 Score=103.97 Aligned_cols=96 Identities=22% Similarity=0.178 Sum_probs=68.3
Q ss_pred ceeecCccCCCC--------CCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEc
Q 004935 258 AYLWQGLNCSYP--------EYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNL 329 (723)
Q Consensus 258 ~~~w~g~~c~~~--------~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l 329 (723)
.|.|.|+ |.-. ...+++|+.|+|++|++++..|..|++|++|++|+|++|++++..|..++++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4667776 5421 112357888888888888777778888888888888888888877778888888888888
Q ss_pred cCCCCCCchhhccc---CccccccCCCC
Q 004935 330 KGTIPNGLIEKQKN---GLLSLSVEGNP 354 (723)
Q Consensus 330 ~~n~~~g~~p~~~~---~~~~l~~~~n~ 354 (723)
++|.+++..|..+. .+..+...+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCc
Confidence 88888877766444 33444555553
No 320
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.38 E-value=4.6e-07 Score=93.74 Aligned_cols=80 Identities=26% Similarity=0.274 Sum_probs=47.9
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|+|++..|..|+.|++|+.|+|++|+|++..|..+..+++|+.|+|++|.+++..+..+. ++..+.+
T Consensus 100 ~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 179 (290)
T 1p9a_G 100 PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179 (290)
T ss_dssp TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEEC
Confidence 4566666666666655555666666666666666666655555566666666677666666654433222 3334444
Q ss_pred CCC
Q 004935 351 EGN 353 (723)
Q Consensus 351 ~~n 353 (723)
.+|
T Consensus 180 ~~N 182 (290)
T 1p9a_G 180 QEN 182 (290)
T ss_dssp CSS
T ss_pred CCC
Confidence 444
No 321
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.38 E-value=1.9e-07 Score=97.66 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=71.7
Q ss_pred EEEEEEc-CCCCCcchhh--hhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCC
Q 004935 221 IEFSINT-TESSTLPPIL--NAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTL 297 (723)
Q Consensus 221 ~~lsl~~-~~~s~lPp~i--nale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l 297 (723)
..+.+.. ...+.+|..+ ..+..++.+.+..+...+. +..+.++.- ..+++|+.|+|++|++++..|..|+++
T Consensus 98 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~----~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 98 QELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQ----WLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp CEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT----TCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHH----hhcCCCcEEEeeCCCCccchHHHhccC
Confidence 3455555 3334556554 5666666666554443332 211111100 012467777777777776666777777
Q ss_pred CCCCeeeCcCCcCcCC--CCccC--CCCCCCcEEEccCCCCCC--chhhcc----cCccccccCCCC
Q 004935 298 TSIQILDLSNNNLTGP--VPDFL--SQLPFLTELNLKGTIPNG--LIEKQK----NGLLSLSVEGNP 354 (723)
Q Consensus 298 ~~L~~L~ls~N~l~g~--iP~~l--~~l~~L~~l~l~~n~~~g--~~p~~~----~~~~~l~~~~n~ 354 (723)
++|+.|+|++|+++|. +|..+ +++++|+.|+|++|.+++ .++..+ ..+..+.+++|.
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 7777777777777665 33344 677777777777777764 222221 244555555553
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.37 E-value=4.9e-07 Score=92.59 Aligned_cols=63 Identities=24% Similarity=0.210 Sum_probs=35.7
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
++|+.|+|++|++++..|..|+++++|+.|+|++|++++..+..++++++|+.|+|++|.+++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce
Confidence 355555555555555555555555555555555555555444455555555555555555554
No 323
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.37 E-value=2.5e-07 Score=96.28 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=68.0
Q ss_pred CCceEEEEcCCCcccc-cCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccc
Q 004935 273 PPRITSLNLSSSGIAG-DIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSL 348 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g-~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l 348 (723)
.++|+.|+|++|.+++ .+|..++.+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+. .+..+
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 3689999999999988 6788899999999999999999998899999999999999999999886654443 44556
Q ss_pred ccCCCC
Q 004935 349 SVEGNP 354 (723)
Q Consensus 349 ~~~~n~ 354 (723)
.+.+|.
T Consensus 229 ~L~~N~ 234 (306)
T 2z66_A 229 DYSLNH 234 (306)
T ss_dssp ECTTSC
T ss_pred ECCCCC
Confidence 666664
No 324
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.37 E-value=5.6e-07 Score=92.64 Aligned_cols=123 Identities=12% Similarity=0.085 Sum_probs=74.8
Q ss_pred EEEEEcCC-CCCc-chhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 222 EFSINTTE-SSTL-PPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 222 ~lsl~~~~-~s~l-Pp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
.+.+..+. -..+ |..+..+..++.+.+..+......+.. -...++|+.|+|++|++++..+..++.+++
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 154 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL---------FRGLAALQYLYLQDNALQALPDDTFRDLGN 154 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT---------TTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhH---------hhCCcCCCEEECCCCcccccCHhHhccCCC
Confidence 34444432 2333 455666666666655443222211100 012357888888888887655566788888
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccC---ccccccCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG---LLSLSVEGN 353 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~---~~~l~~~~n 353 (723)
|+.|+|++|++++..+..+..+++|+.|+|++|.+++..|..+.. +..+.+.+|
T Consensus 155 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 155 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 888888888888665666777888888888888887776665543 334445555
No 325
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.36 E-value=4.7e-07 Score=103.98 Aligned_cols=63 Identities=24% Similarity=0.210 Sum_probs=32.8
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
++|+.|+|++|+|++-.|..|++|++|++|+|++|+|++..|..+++|++|+.|+|++|.+++
T Consensus 100 ~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~ 162 (635)
T 4g8a_A 100 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 162 (635)
T ss_dssp TTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcccc
Confidence 345555555555554333445555555555555555554444445555555555555555543
No 326
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.35 E-value=1.2e-07 Score=105.78 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHHHhccCCceeeEEEEEecCC
Q 004935 463 QGYKQFQAEVELLMRIHHKNLTTLVGYCDEGT 494 (723)
Q Consensus 463 ~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~ 494 (723)
.+.++|..|++.+++++|+|+|+++|||....
T Consensus 321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 321 QGSETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ccHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 34578999999999999999999999997654
No 327
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.35 E-value=5.5e-07 Score=103.11 Aligned_cols=80 Identities=21% Similarity=0.176 Sum_probs=54.8
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCccccccCCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGLLSLSVEGN 353 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~~~l~~~~n 353 (723)
++|+.|+|++|.|++..|..|++|++|+.|+|++|+|++..|..++++++|+.|+|++|.+++..+..+..+..+.+.+|
T Consensus 123 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 123 PLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 56777888888777433333577788888888888887777777777788888888877777654444444444444444
No 328
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.34 E-value=8e-07 Score=93.59 Aligned_cols=62 Identities=21% Similarity=0.291 Sum_probs=30.7
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCc
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ 337 (723)
+|+.|+|++|.+++..|..++.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+++.
T Consensus 217 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred CCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCcc
Confidence 4445555555555444444555555555555555554 4444444555555555555544443
No 329
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.34 E-value=3.8e-07 Score=100.52 Aligned_cols=113 Identities=13% Similarity=0.132 Sum_probs=87.3
Q ss_pred ceEEEEEEcCCCCCc-chhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCC
Q 004935 219 EKIEFSINTTESSTL-PPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTL 297 (723)
Q Consensus 219 ~~~~lsl~~~~~s~l-Pp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l 297 (723)
....+.+..+.-..+ |..+..+..++.+.+..+......+..+. ..++|+.|+|++|++++.+|..|+.+
T Consensus 300 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---------~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 300 DLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFE---------NLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGT---------TCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhc---------CcccCCEEECCCCcccccChhhcccc
Confidence 344566666444444 45777788888887765544332222221 23689999999999999999999999
Q ss_pred CCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 298 TSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 298 ~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
++|+.|+|++|+|++..|..+..+++|+.|+|++|.+++.+|.
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 9999999999999986667789999999999999999998884
No 330
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.33 E-value=5.5e-07 Score=103.17 Aligned_cols=114 Identities=11% Similarity=0.103 Sum_probs=73.2
Q ss_pred EEEEEEcCCCCCc-chhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 221 IEFSINTTESSTL-PPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 221 ~~lsl~~~~~s~l-Pp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
..+.+..+.-..+ |..+..+..++.+.+..+......+..+. ..++|+.|+|++|++++..|..+++|++
T Consensus 59 ~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~---------~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 129 (606)
T 3vq2_A 59 QWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFS---------GLTSLENLVAVETKLASLESFPIGQLIT 129 (606)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSST---------TCTTCCEEECTTSCCCCSSSSCCTTCTT
T ss_pred cEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcC---------CcccCCEEEccCCccccccccccCCCCC
Confidence 3355544333333 34556666666666544433322222111 2356888888888888766677888888
Q ss_pred CCeeeCcCCcCcC-CCCccCCCCCCCcEEEccCCCCCCchhhccc
Q 004935 300 IQILDLSNNNLTG-PVPDFLSQLPFLTELNLKGTIPNGLIEKQKN 343 (723)
Q Consensus 300 L~~L~ls~N~l~g-~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~ 343 (723)
|++|+|++|++++ .+|..++++++|+.|+|++|.+++..|..+.
T Consensus 130 L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 130 LKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp CCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred CCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhh
Confidence 8888888888875 6788888888888888888888776665443
No 331
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.32 E-value=4.8e-07 Score=103.62 Aligned_cols=123 Identities=15% Similarity=0.225 Sum_probs=87.9
Q ss_pred EEEEcCCCCCcchh-hhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCC
Q 004935 223 FSINTTESSTLPPI-LNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQ 301 (723)
Q Consensus 223 lsl~~~~~s~lPp~-inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~ 301 (723)
+.+....-+.+|+. +..+..++.+.+..+......+..+ ...++|+.|+|++|.+++..|..|++|++|+
T Consensus 56 l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~---------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 126 (597)
T 3oja_B 56 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAF---------AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 126 (597)
T ss_dssp EEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTT---------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHh---------cCCCCCCEEECCCCcCCCCCHHHHcCCCCCC
Confidence 44444334445554 5667777777665443322111111 1246899999999999998888899999999
Q ss_pred eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccC---ccccccCCCC
Q 004935 302 ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG---LLSLSVEGNP 354 (723)
Q Consensus 302 ~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~---~~~l~~~~n~ 354 (723)
+|+|++|+|++..|..++++++|+.|+|++|.+++..|..+.. +..|.+.+|.
T Consensus 127 ~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 127 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSC
T ss_pred EEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCC
Confidence 9999999999655556799999999999999999988876653 4445566663
No 332
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.31 E-value=4.3e-07 Score=93.01 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=41.4
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcC-CCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTG-PVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g-~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
++|+.|+|++|++++..+..++++++|+.|+|++|++++ .+|..++++++|+.|+|++|.+++..+.
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 456666666666665555456666666666666666665 3566666666666666666666654443
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.31 E-value=1e-06 Score=92.72 Aligned_cols=95 Identities=22% Similarity=0.240 Sum_probs=75.5
Q ss_pred ceeecCccCCCC------CCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccC
Q 004935 258 AYLWQGLNCSYP------EYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKG 331 (723)
Q Consensus 258 ~~~w~g~~c~~~------~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~ 331 (723)
.|.|..+.|+.. ...++.++.|+|++|++++..+..|+++++|++|+|++|++++..|..++++++|+.|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 356777777642 22456899999999999987777899999999999999999998899999999999999999
Q ss_pred CCCCCchhhcc-cCccccccCCC
Q 004935 332 TIPNGLIEKQK-NGLLSLSVEGN 353 (723)
Q Consensus 332 n~~~g~~p~~~-~~~~~l~~~~n 353 (723)
|.++. +|..+ ..+..+.+.+|
T Consensus 110 n~l~~-l~~~~~~~L~~L~l~~n 131 (330)
T 1xku_A 110 NQLKE-LPEKMPKTLQELRVHEN 131 (330)
T ss_dssp SCCSB-CCSSCCTTCCEEECCSS
T ss_pred CcCCc-cChhhcccccEEECCCC
Confidence 99874 44333 34555555555
No 334
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.29 E-value=8.2e-07 Score=98.59 Aligned_cols=85 Identities=26% Similarity=0.289 Sum_probs=71.7
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. .+..+.+
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 327 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLIL 327 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEc
Confidence 5799999999999987778899999999999999999998899999999999999999999887665543 4556778
Q ss_pred CCCCCCCC
Q 004935 351 EGNPDLCP 358 (723)
Q Consensus 351 ~~n~~lc~ 358 (723)
.+|+-.|.
T Consensus 328 ~~N~l~c~ 335 (477)
T 2id5_A 328 DSNPLACD 335 (477)
T ss_dssp CSSCEECS
T ss_pred cCCCccCc
Confidence 88887664
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.29 E-value=1e-06 Score=99.00 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=45.4
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcC--CCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTG--PVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g--~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
++|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..++++++|+.|+|++|.+++.+|.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 466677777777776667667777777777777777765 5666666667777777777766665554
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.29 E-value=6e-07 Score=93.74 Aligned_cols=76 Identities=25% Similarity=0.319 Sum_probs=36.5
Q ss_pred ceEEEEcCCCcccccCcccccCC---CCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC-chhhcccCcccccc
Q 004935 275 RITSLNLSSSGIAGDIAPYISTL---TSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG-LIEKQKNGLLSLSV 350 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l---~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g-~~p~~~~~~~~l~~ 350 (723)
+|+.|+|++|+|++.+|+.++.+ ++|+.|+|++|+|+ .||..+. ++|+.|+|++|.+++ +.+..+..+..+.+
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L 301 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDNLTL 301 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSCEEC
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccEEEC
Confidence 44555555555555555544444 35555555555555 4454443 455555555555554 23333333344444
Q ss_pred CCC
Q 004935 351 EGN 353 (723)
Q Consensus 351 ~~n 353 (723)
.+|
T Consensus 302 ~~N 304 (310)
T 4glp_A 302 DGN 304 (310)
T ss_dssp SST
T ss_pred cCC
Confidence 444
No 337
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.29 E-value=3.1e-06 Score=96.09 Aligned_cols=67 Identities=22% Similarity=0.193 Sum_probs=42.1
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcC--CCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTG--PVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g--~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
++|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..++++++|+.|+|++|.+++.+|.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 421 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh
Confidence 456666666666666666666666666666666666665 3445566666666666666666654443
No 338
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.28 E-value=1e-06 Score=92.89 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=75.2
Q ss_pred eeecCccCCCCC------CCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC
Q 004935 259 YLWQGLNCSYPE------YDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 259 ~~w~g~~c~~~~------~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n 332 (723)
|.|..+.|+... ..++.++.|+|++|++++..|..|+++++|+.|+|++|++++..|..++++++|+.|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 567777776432 23468999999999999877889999999999999999999988999999999999999999
Q ss_pred CCCCchhhcc-cCccccccCCCC
Q 004935 333 IPNGLIEKQK-NGLLSLSVEGNP 354 (723)
Q Consensus 333 ~~~g~~p~~~-~~~~~l~~~~n~ 354 (723)
.++. +|..+ ..+..+.+.+|.
T Consensus 113 ~l~~-l~~~~~~~L~~L~l~~n~ 134 (332)
T 2ft3_A 113 HLVE-IPPNLPSSLVELRIHDNR 134 (332)
T ss_dssp CCCS-CCSSCCTTCCEEECCSSC
T ss_pred cCCc-cCccccccCCEEECCCCc
Confidence 9884 44333 345556666653
No 339
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.28 E-value=7e-07 Score=95.34 Aligned_cols=78 Identities=12% Similarity=0.188 Sum_probs=58.3
Q ss_pred hhccccCcEEEEEEEECCceEEEEEec--CCC-hhhHHHHHHHHHHHHhcc--CCceeeEEEEEecC---CceEEEEEeC
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLS--PSS-AQGYKQFQAEVELLMRIH--HKNLTTLVGYCDEG---TNRGLIYEFM 503 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~--~~~-~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~---~~~~lV~Ey~ 503 (723)
+.|+.|.++.||+....++.+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++||||+
T Consensus 44 ~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v 123 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV 123 (359)
T ss_dssp EECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC
T ss_pred EEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec
Confidence 468899999999999888899999876 432 123457889999999997 45678899998776 4589999999
Q ss_pred CCCCHH
Q 004935 504 ANGNLQ 509 (723)
Q Consensus 504 ~~gsL~ 509 (723)
++..+.
T Consensus 124 ~G~~l~ 129 (359)
T 3dxp_A 124 SGRVLW 129 (359)
T ss_dssp CCBCCC
T ss_pred CCeecC
Confidence 988773
No 340
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.27 E-value=4.8e-07 Score=94.57 Aligned_cols=62 Identities=26% Similarity=0.261 Sum_probs=30.4
Q ss_pred CceEEEEcCCCcccc--cCccc-ccCCCCCCeeeCcCCcCcCCCC-ccCCCCCCCcEEEccCCCCC
Q 004935 274 PRITSLNLSSSGIAG--DIAPY-ISTLTSIQILDLSNNNLTGPVP-DFLSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g--~ip~~-~~~l~~L~~L~ls~N~l~g~iP-~~l~~l~~L~~l~l~~n~~~ 335 (723)
++|+.|+|++|++++ .+|.. +.++++|+.|+|++|++++.+| ..+..+++|+.|+|++|.++
T Consensus 201 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 201 PTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred CCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 345555555555552 23322 2445555555555555555544 23334555555555555554
No 341
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.26 E-value=8e-07 Score=106.10 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=87.9
Q ss_pred eEEEEEEcC-CCCCc-chhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCccc--cc
Q 004935 220 KIEFSINTT-ESSTL-PPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPY--IS 295 (723)
Q Consensus 220 ~~~lsl~~~-~~s~l-Pp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~--~~ 295 (723)
...+.+..+ ..+.+ |..+..+..++.+.+..+......+..+. ..++|+.|+|++|++++.+|.. |+
T Consensus 50 L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~---------~l~~L~~L~Ls~n~l~~~~~~~~~~~ 120 (844)
T 3j0a_A 50 LQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ---------GLFHLFELRLYFCGLSDAVLKDGYFR 120 (844)
T ss_dssp CSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC---------SCSSCCCEECTTCCCSSCCSTTCCCS
T ss_pred CeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc---------CCcccCEeeCcCCCCCcccccCcccc
Confidence 344666554 34455 55677777777777665544333332222 2357899999999999888876 89
Q ss_pred CCCCCCeeeCcCCcCcCCCC-ccCCCCCCCcEEEccCCCCCCchhhccc-----CccccccCCC
Q 004935 296 TLTSIQILDLSNNNLTGPVP-DFLSQLPFLTELNLKGTIPNGLIEKQKN-----GLLSLSVEGN 353 (723)
Q Consensus 296 ~l~~L~~L~ls~N~l~g~iP-~~l~~l~~L~~l~l~~n~~~g~~p~~~~-----~~~~l~~~~n 353 (723)
+|++|+.|+|++|++++..| ..+++|++|+.|+|++|.+++..|..+. .+..+.+.+|
T Consensus 121 ~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n 184 (844)
T 3j0a_A 121 NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184 (844)
T ss_dssp SCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCS
T ss_pred ccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCC
Confidence 99999999999999988765 5788999999999999998887776543 3444555555
No 342
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.26 E-value=1.2e-06 Score=93.19 Aligned_cols=99 Identities=23% Similarity=0.210 Sum_probs=78.2
Q ss_pred CCCceeecCccCCCC--------CCCCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcE
Q 004935 255 QQDAYLWQGLNCSYP--------EYDPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTE 326 (723)
Q Consensus 255 ~~~~~~w~g~~c~~~--------~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~ 326 (723)
....|.|.|+ |.-. ...+++|+.|+|++|++++..+..++++++|+.|+|++|++++..|..++++++|++
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp -CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 3456888887 4321 123458999999999999766668999999999999999999988999999999999
Q ss_pred EEccCCCCCCchhhccc---CccccccCCCC
Q 004935 327 LNLKGTIPNGLIEKQKN---GLLSLSVEGNP 354 (723)
Q Consensus 327 l~l~~n~~~g~~p~~~~---~~~~l~~~~n~ 354 (723)
|+|++|.+++..+..+. ++..+.+.+|.
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 135 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNP 135 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCC
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCC
Confidence 99999999986655343 45566667764
No 343
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.25 E-value=2.1e-06 Score=99.79 Aligned_cols=85 Identities=27% Similarity=0.345 Sum_probs=74.1
Q ss_pred CCceEEEEcCCCcccccCcc-cccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhc----ccCccc
Q 004935 273 PPRITSLNLSSSGIAGDIAP-YISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQ----KNGLLS 347 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~----~~~~~~ 347 (723)
.++|+.|+|++|+++ .||+ .|++|++|+.|+|++|+|++..|..+.++++|+.|+|++|.+++..|.. +..+..
T Consensus 535 l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~ 613 (680)
T 1ziw_A 535 LSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE 613 (680)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSE
T ss_pred CCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCE
Confidence 468999999999999 6776 5899999999999999999766667789999999999999999988763 446777
Q ss_pred cccCCCCCCCC
Q 004935 348 LSVEGNPDLCP 358 (723)
Q Consensus 348 l~~~~n~~lc~ 358 (723)
+.+.+|+..|.
T Consensus 614 l~l~~N~~~c~ 624 (680)
T 1ziw_A 614 LDMRFNPFDCT 624 (680)
T ss_dssp EECTTCCCCBC
T ss_pred EEccCCCcccC
Confidence 88999999986
No 344
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.24 E-value=1.3e-06 Score=96.42 Aligned_cols=83 Identities=22% Similarity=0.189 Sum_probs=67.4
Q ss_pred CCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccc
Q 004935 272 DPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSL 348 (723)
Q Consensus 272 ~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l 348 (723)
.++.++.|+|++|++++..|..|++|++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. ++..|
T Consensus 73 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 152 (452)
T 3zyi_A 73 IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLREL 152 (452)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEE
T ss_pred CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEE
Confidence 456889999999999988888899999999999999999988888899999999999999988876655443 34455
Q ss_pred ccCCCC
Q 004935 349 SVEGNP 354 (723)
Q Consensus 349 ~~~~n~ 354 (723)
.+.+|.
T Consensus 153 ~L~~N~ 158 (452)
T 3zyi_A 153 WLRNNP 158 (452)
T ss_dssp ECCSCC
T ss_pred ECCCCC
Confidence 566654
No 345
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.23 E-value=1.3e-06 Score=94.19 Aligned_cols=66 Identities=18% Similarity=0.263 Sum_probs=34.9
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCc-cCCCCCCCcEEEccCCCCCCchhh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPD-FLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~-~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
++|+.|+|++|++++..|..|+++++|+.|+|++|+++ .+|. .++++++|+.|+|++|.+++..|.
T Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~ 159 (390)
T 3o6n_A 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD 159 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChh
Confidence 34555555555555544455555555555555555555 2333 235555555555555555554443
No 346
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.22 E-value=8.3e-07 Score=84.36 Aligned_cols=60 Identities=22% Similarity=0.192 Sum_probs=38.9
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
+|+.|+|++|+|++. +.++.+++|+.|+|++|+|++..|..++.+++|+.|+|++|.++.
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 102 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE 102 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc
Confidence 566777777777653 566677777777777777764333334667777777777776643
No 347
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.22 E-value=1e-06 Score=88.17 Aligned_cols=64 Identities=14% Similarity=0.212 Sum_probs=35.6
Q ss_pred CceEEEEcCC-CcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCc---EEEccCC-CCCCchh
Q 004935 274 PRITSLNLSS-SGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLT---ELNLKGT-IPNGLIE 339 (723)
Q Consensus 274 ~~l~~l~ls~-n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~---~l~l~~n-~~~g~~p 339 (723)
++|+.|+|++ |++++..|..|+++++|+.|+|++|++++ +|. ++.+++|+ .|+|++| .+++..+
T Consensus 80 ~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~ 148 (239)
T 2xwt_C 80 SKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPV 148 (239)
T ss_dssp TTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECT
T ss_pred cCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCc
Confidence 3556666665 56654444455566666666666666654 554 55555555 5666655 5544333
No 348
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.20 E-value=9.1e-07 Score=93.25 Aligned_cols=66 Identities=24% Similarity=0.238 Sum_probs=43.5
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
++|+.|+|++|++++..|..++.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|.+++..+.
T Consensus 217 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~ 282 (332)
T 2ft3_A 217 SKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVN 282 (332)
T ss_dssp TTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChh
Confidence 45666677777666655556666677777777777666 6666666666777777776666654433
No 349
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.20 E-value=1.4e-06 Score=96.05 Aligned_cols=77 Identities=22% Similarity=0.352 Sum_probs=51.4
Q ss_pred CCceEEEEcCCCcccccCcccccCC-----------------CCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCC
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTL-----------------TSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l-----------------~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~ 335 (723)
+++|+.|+|++|+++| ||+.+.+| ++|++|+|++|++++ +| .++++++|+.|+|++|.++
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~ 166 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK 166 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc
Confidence 3456666666666665 55433221 467788888888876 77 4788888888888888887
Q ss_pred CchhhcccCccccccCCC
Q 004935 336 GLIEKQKNGLLSLSVEGN 353 (723)
Q Consensus 336 g~~p~~~~~~~~l~~~~n 353 (723)
+ +|.....+..+.+.+|
T Consensus 167 ~-lp~~~~~L~~L~L~~n 183 (454)
T 1jl5_A 167 K-LPDLPPSLEFIAAGNN 183 (454)
T ss_dssp C-CCCCCTTCCEEECCSS
T ss_pred c-cCCCcccccEEECcCC
Confidence 6 5555555556666655
No 350
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.19 E-value=2.5e-06 Score=92.04 Aligned_cols=122 Identities=15% Similarity=0.104 Sum_probs=83.3
Q ss_pred EEEEEcCCCCCcch-hhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCccc-ccCCCC
Q 004935 222 EFSINTTESSTLPP-ILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPY-ISTLTS 299 (723)
Q Consensus 222 ~lsl~~~~~s~lPp-~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~-~~~l~~ 299 (723)
.+.+..+.-..+|+ .+..+..++.+.+..+......+..+ ...++|+.|+|++|+++ .+|+. ++++++
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---------~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~ 142 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVF---------QNVPLLTVLVLERNDLS-SLPRGIFHNTPK 142 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTT---------TTCTTCCEEECCSSCCC-CCCTTTTTTCTT
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHh---------cCCCCCCEEECCCCccC-cCCHHHhcCCCC
Confidence 34554433334443 56666666666654332222111101 12468999999999999 56665 699999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCccccccCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGLLSLSVEGN 353 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~~~l~~~~n 353 (723)
|+.|+|++|++++..|..+.++++|+.|+|++|.+++.-...+..+..+.+.+|
T Consensus 143 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 143 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 999999999999888888999999999999999998764444545555555555
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.17 E-value=1.3e-06 Score=97.98 Aligned_cols=123 Identities=16% Similarity=0.072 Sum_probs=85.7
Q ss_pred eEEEEEEcCCCCCcc-hhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCC
Q 004935 220 KIEFSINTTESSTLP-PILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLT 298 (723)
Q Consensus 220 ~~~lsl~~~~~s~lP-p~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~ 298 (723)
...+.+..+.-..+| ..+..+..++.+.+..+...+..+..+. ..++|+.|+|++|+++ .||.. .++
T Consensus 23 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~---------~l~~L~~L~Ls~N~l~-~lp~~--~l~ 90 (520)
T 2z7x_B 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFK---------FNQELEYLDLSHNKLV-KISCH--PTV 90 (520)
T ss_dssp CSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGT---------TCTTCCEEECCSSCCC-EEECC--CCC
T ss_pred ccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhh---------cccCCCEEecCCCcee-ecCcc--ccC
Confidence 344666664444444 5777788888777665543332222221 2357899999999998 68887 899
Q ss_pred CCCeeeCcCCcCcC-CCCccCCCCCCCcEEEccCCCCCCchhhcccCc--cccccCCCC
Q 004935 299 SIQILDLSNNNLTG-PVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGL--LSLSVEGNP 354 (723)
Q Consensus 299 ~L~~L~ls~N~l~g-~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~--~~l~~~~n~ 354 (723)
+|++|+|++|++++ .+|..++++++|+.|+|++|.+++.....+..+ ..+...+|.
T Consensus 91 ~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~ 149 (520)
T 2z7x_B 91 NLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGE 149 (520)
T ss_dssp CCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECT
T ss_pred CccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccc
Confidence 99999999999988 688999999999999999998887443444444 555555553
No 352
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.16 E-value=1.3e-06 Score=98.67 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=72.6
Q ss_pred EEEEEEcCCCCCc-chhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 221 IEFSINTTESSTL-PPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 221 ~~lsl~~~~~s~l-Pp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
..+.+..+.-..+ |..+..+..++.+.+..+...+..+..+ ...++|+.|+|++|++++..|..|++|++
T Consensus 29 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~---------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 99 (549)
T 2z81_A 29 KSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF---------YSLGSLEHLDLSDNHLSSLSSSWFGPLSS 99 (549)
T ss_dssp CEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT---------TTCTTCCEEECTTSCCCSCCHHHHTTCTT
T ss_pred cEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc---------cccccCCEEECCCCccCccCHHHhccCCC
Confidence 3455555333333 4556677777777665443322211111 12357888888888888777777888888
Q ss_pred CCeeeCcCCcCcC-CCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 300 IQILDLSNNNLTG-PVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 300 L~~L~ls~N~l~g-~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
|++|+|++|++++ .+|..++++++|+.|+|++|.+.+.+|
T Consensus 100 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 100 LKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR 140 (549)
T ss_dssp CCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CcEEECCCCcccccchhhhhhccCCccEEECCCCccccccC
Confidence 8888888888887 567778888888888888887555555
No 353
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.15 E-value=2.5e-06 Score=94.63 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=42.8
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++.++.|+|++|++++..|..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 97 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPL 97 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCT
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCc
Confidence 3456666666666666656666666666666666666666666666666666666666666655433
No 354
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.15 E-value=1.7e-06 Score=98.20 Aligned_cols=68 Identities=19% Similarity=0.234 Sum_probs=64.7
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhh
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~ 340 (723)
.++|+.|+|++|++++.+|..++++++|+.|+|++|+|++..|..+.++++|+.|+|++|.+++.+|.
T Consensus 469 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 46899999999999999999999999999999999999999888999999999999999999998875
No 355
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.12 E-value=2.4e-06 Score=97.86 Aligned_cols=81 Identities=21% Similarity=0.033 Sum_probs=65.0
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~ 350 (723)
++|+.|+|++|++++..|..|++|++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+. ++..+.+
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 5788899999998888888889999999999999999888888888899999999998888886555554 3344555
Q ss_pred CCCC
Q 004935 351 EGNP 354 (723)
Q Consensus 351 ~~n~ 354 (723)
.+|.
T Consensus 137 ~~n~ 140 (606)
T 3t6q_A 137 GSNH 140 (606)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 5553
No 356
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.12 E-value=2.3e-06 Score=81.21 Aligned_cols=63 Identities=24% Similarity=0.177 Sum_probs=54.6
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCc--cCCCCCCCcEEEccCCCCCC
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPD--FLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~--~l~~l~~L~~l~l~~n~~~g 336 (723)
.++|+.|+|++|+|++..|..++.+++|+.|+|++|+++ .+|. .+..+++|+.|+|++|.++.
T Consensus 63 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 63 LRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp CSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred CCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC
Confidence 468999999999999643344599999999999999994 6887 89999999999999999874
No 357
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.10 E-value=2.6e-06 Score=89.23 Aligned_cols=58 Identities=21% Similarity=0.131 Sum_probs=23.8
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCC
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~ 335 (723)
+|+.|+|++|++++. | ....+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++
T Consensus 170 ~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 170 TLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp TCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC
T ss_pred cCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc
Confidence 344444444444432 1 12224444444444444442 2223444444444444444444
No 358
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.10 E-value=4.2e-06 Score=97.27 Aligned_cols=125 Identities=19% Similarity=0.145 Sum_probs=88.6
Q ss_pred eEEEEEEcC-CCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCC
Q 004935 220 KIEFSINTT-ESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLT 298 (723)
Q Consensus 220 ~~~lsl~~~-~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~ 298 (723)
...+.+..+ ..+..|..+..+..++.+.+..+....-.+..+ ...++|+.|+|++|++++..|..|++|+
T Consensus 51 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~---------~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 121 (680)
T 1ziw_A 51 LTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTF---------AFCTNLTELHLMSNSIQKIKNNPFVKQK 121 (680)
T ss_dssp CSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTT---------TTCTTCSEEECCSSCCCCCCSCTTTTCT
T ss_pred CcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhh---------ccCCCCCEEECCCCccCccChhHccccC
Confidence 334555543 333445667777777777665432221111001 1236899999999999877778899999
Q ss_pred CCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcc-----cCccccccCCC
Q 004935 299 SIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQK-----NGLLSLSVEGN 353 (723)
Q Consensus 299 ~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~-----~~~~~l~~~~n 353 (723)
+|++|+|++|++++..|..++++++|+.|+|++|.+++..+..+ ..+..+.+.+|
T Consensus 122 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp TCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 99999999999999999999999999999999999998877643 23455666666
No 359
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.09 E-value=3e-06 Score=84.73 Aligned_cols=78 Identities=22% Similarity=0.173 Sum_probs=49.2
Q ss_pred CceE-EEEcCCCcccccCcccccCCCCCCeeeCcCCc-CcCCCCccCCCC-CCCcEEEccCCCCCCchhhcccCcccccc
Q 004935 274 PRIT-SLNLSSSGIAGDIAPYISTLTSIQILDLSNNN-LTGPVPDFLSQL-PFLTELNLKGTIPNGLIEKQKNGLLSLSV 350 (723)
Q Consensus 274 ~~l~-~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~-l~g~iP~~l~~l-~~L~~l~l~~n~~~g~~p~~~~~~~~l~~ 350 (723)
++|+ .|+|++|+++ .||+.....++|+.|+|++|+ +++..|..+..+ ++|+.|+|++|.+++..+..+..+..+..
T Consensus 155 ~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L~~L~l 233 (239)
T 2xwt_C 155 CNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIA 233 (239)
T ss_dssp BSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTCSEEEC
T ss_pred hcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccCceeec
Confidence 4667 7777777777 666655444677777777773 775445566677 77777777777776544333444444444
Q ss_pred CC
Q 004935 351 EG 352 (723)
Q Consensus 351 ~~ 352 (723)
.+
T Consensus 234 ~~ 235 (239)
T 2xwt_C 234 RN 235 (239)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 360
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.09 E-value=3.4e-06 Score=95.76 Aligned_cols=77 Identities=19% Similarity=0.128 Sum_probs=54.0
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC-chhhccc---Cccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG-LIEKQKN---GLLSLS 349 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g-~~p~~~~---~~~~l~ 349 (723)
++|+.|+|++|++++..|..|++|++|++|+|++|+|+ .||.. .+++|+.|+|++|.+++ .+|..+. ++..+.
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~ 152 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG 152 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEe
Confidence 56778888888888777777888888888888888877 57766 77788888888887776 3444444 333444
Q ss_pred cCCC
Q 004935 350 VEGN 353 (723)
Q Consensus 350 ~~~n 353 (723)
..+|
T Consensus 153 L~~n 156 (562)
T 3a79_B 153 LSAA 156 (562)
T ss_dssp EECS
T ss_pred cCCC
Confidence 4444
No 361
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.08 E-value=1.8e-06 Score=87.54 Aligned_cols=64 Identities=30% Similarity=0.426 Sum_probs=55.6
Q ss_pred CceEEEEcCCCcccc--cCcccccCCCCCCeeeCcCCcCcCCCCccCCCCC--CCcEEEccCCCCCCchh
Q 004935 274 PRITSLNLSSSGIAG--DIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLP--FLTELNLKGTIPNGLIE 339 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g--~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~--~L~~l~l~~n~~~g~~p 339 (723)
++|+.|+|++|+|++ .||..++.|++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 689999999999999 7888899999999999999999975 3455555 99999999999988665
No 362
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.07 E-value=4.7e-06 Score=88.16 Aligned_cols=80 Identities=20% Similarity=0.188 Sum_probs=55.1
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhh-cccCccccccC
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEK-QKNGLLSLSVE 351 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~-~~~~~~~l~~~ 351 (723)
.++|+.|+|++|++++. +.+..+++|+.|+|++|++++..|..++++++|+.|+|++|.+++..|. .+..+..+.+.
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~ 341 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 341 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSS
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehh
Confidence 35677778887777763 4577777788888888887777777777777888888888777776662 22244455555
Q ss_pred CCC
Q 004935 352 GNP 354 (723)
Q Consensus 352 ~n~ 354 (723)
+|+
T Consensus 342 ~N~ 344 (347)
T 4fmz_A 342 NQV 344 (347)
T ss_dssp CC-
T ss_pred hhc
Confidence 553
No 363
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.07 E-value=4.6e-06 Score=91.57 Aligned_cols=82 Identities=21% Similarity=0.119 Sum_probs=55.9
Q ss_pred CCCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Ccccc
Q 004935 272 DPPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSL 348 (723)
Q Consensus 272 ~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l 348 (723)
.++.++.|+|++|++++..|..|++|++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..+..+. ++..|
T Consensus 62 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 141 (440)
T 3zyj_A 62 ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKEL 141 (440)
T ss_dssp CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEE
T ss_pred CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCcee
Confidence 345677777777777777777777777777777777777776667777777777777777777765544333 33344
Q ss_pred ccCCC
Q 004935 349 SVEGN 353 (723)
Q Consensus 349 ~~~~n 353 (723)
.+.+|
T Consensus 142 ~L~~N 146 (440)
T 3zyj_A 142 WLRNN 146 (440)
T ss_dssp ECCSC
T ss_pred eCCCC
Confidence 45555
No 364
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.03 E-value=5e-06 Score=95.11 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=59.7
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGL 345 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~ 345 (723)
.++|+.|+|++|+|+ .||. .+++|+.|+|++|+|+ .||..+.++++|+.|+|++|.+++.+|..+..+
T Consensus 240 l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 240 PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 468999999999998 6887 6788999999999999 889999999999999999999999888766543
No 365
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.02 E-value=7.4e-06 Score=84.44 Aligned_cols=73 Identities=22% Similarity=0.209 Sum_probs=58.4
Q ss_pred hhccccCcEEEEEEEEC-CceEEEEEecCCChhhHHHHHHHHHHHHhccCC---ceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 432 RVLGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK---NLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.|+.|.++.||++... |+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 46899999999999874 668999997544333346789999999999875 577888764 4689999999987
Q ss_pred H
Q 004935 508 L 508 (723)
Q Consensus 508 L 508 (723)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 366
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.01 E-value=8e-06 Score=92.27 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=73.3
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 220 KIEFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 220 ~~~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
...+.+..+.-..+| ..+..++.+.+..+...+ .+ . ...+|+.|+|++|+|++ ||. .+++
T Consensus 82 L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~-ip-------~-----l~~~L~~L~Ls~N~l~~-lp~---~l~~ 141 (571)
T 3cvr_A 82 ITVLEITQNALISLP---ELPASLEYLDACDNRLST-LP-------E-----LPASLKHLDVDNNQLTM-LPE---LPAL 141 (571)
T ss_dssp CSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CC-------C-----CCTTCCEEECCSSCCSC-CCC---CCTT
T ss_pred CCEEECcCCCCcccc---cccCCCCEEEccCCCCCC-cc-------h-----hhcCCCEEECCCCcCCC-CCC---cCcc
Confidence 344666665555677 334555555554432222 11 1 11278999999999998 887 6889
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccCccccccCCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNGLLSLSVEGNP 354 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~~~~l~~~~n~ 354 (723)
|+.|+|++|+|++ ||. .+++|+.|+|++|.+++ +|.-..++..|.+++|.
T Consensus 142 L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 142 LEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNL 191 (571)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred ccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCC
Confidence 9999999999987 886 57889999999999888 55521245556666663
No 367
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.00 E-value=4.6e-06 Score=94.28 Aligned_cols=66 Identities=12% Similarity=0.200 Sum_probs=49.4
Q ss_pred CceEEEEcCCCcccccCcccccCCCCC-------CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSI-------QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG 344 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L-------~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~ 344 (723)
++|+.|+|++|+|+ .||. |.. +| +.|+|++|+|+ .||..+.++++|+.|+|++|.+++.+|..+..
T Consensus 180 ~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 180 ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 56788888888887 7777 554 66 88888888888 58887878888888888888888887776554
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=97.99 E-value=1.4e-05 Score=91.13 Aligned_cols=60 Identities=32% Similarity=0.448 Sum_probs=43.5
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ 337 (723)
++|+.|+|++|+|++. +.|+.|++|+.|+|++|+|++..| +..|++|+.|+|++|.+++.
T Consensus 131 ~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 131 PQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 5677777777777764 567777777777777777776655 77777777777777777764
No 369
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=97.99 E-value=1.5e-05 Score=82.28 Aligned_cols=58 Identities=29% Similarity=0.397 Sum_probs=29.7
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
+|+.|+|++|++++. +.++.+++|+.|+|++|++++..| +..+++|+.|+|++|.+++
T Consensus 135 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 135 QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 455555555555542 345555555555555555554333 4555555555555555544
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=97.97 E-value=1.5e-05 Score=80.97 Aligned_cols=116 Identities=17% Similarity=0.213 Sum_probs=80.7
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCC
Q 004935 220 KIEFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTS 299 (723)
Q Consensus 220 ~~~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~ 299 (723)
...+.+..+.-+.+|+ +..+..++.+.+..+....-.. . .. ++|+.|+|++|++++ + +.++.+++
T Consensus 65 L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~l~~-----~------~~-~~L~~L~L~~N~l~~-~-~~l~~l~~ 129 (263)
T 1xeu_A 65 LKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKNLNG-----I------PS-ACLSRLFLDNNELRD-T-DSLIHLKN 129 (263)
T ss_dssp CCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSCCTT-----C------CC-SSCCEEECCSSCCSB-S-GGGTTCTT
T ss_pred CCEEECCCCccCCChh-hccCCCCCEEECCCCccCCcCc-----c------cc-CcccEEEccCCccCC-C-hhhcCccc
Confidence 3446666655566777 7777777777665443322111 0 11 589999999999997 4 46999999
Q ss_pred CCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---CccccccCCCC
Q 004935 300 IQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLSVEGNP 354 (723)
Q Consensus 300 L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~~~~n~ 354 (723)
|+.|+|++|++++. | .++.+++|+.|+|++|.+++. ..+. .+..+.+.+|+
T Consensus 130 L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 130 LEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred ccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 99999999999974 5 688999999999999999886 2222 33344555554
No 371
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.97 E-value=5.9e-06 Score=85.89 Aligned_cols=174 Identities=18% Similarity=0.178 Sum_probs=103.2
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhcc-CCc--eeeEEEEEecCC---ceEEEEEeCCC
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKN--LTTLVGYCDEGT---NRGLIYEFMAN 505 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~n--Iv~l~g~~~~~~---~~~lV~Ey~~~ 505 (723)
+.++.|....||+.. ..+++|+.... .....+.+|+++|+.+. +.. +...+..+...+ ..++|||++++
T Consensus 26 ~~~~~G~~n~v~~v~---~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN---RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST---TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC---CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 357899999999863 67899986532 34567899999999884 332 345555544433 34789999999
Q ss_pred CCHHHHhc-----------------------cCCC---C---CCC-HHHH------HH----------------H----H
Q 004935 506 GNLQALLL-----------------------GEEA---D---ILS-WEGR------LR----------------I----A 529 (723)
Q Consensus 506 gsL~~~l~-----------------------~~~~---~---~l~-~~~~------l~----------------i----~ 529 (723)
.+|.+... .... . ... |... +. - +
T Consensus 101 ~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 180 (304)
T 3sg8_A 101 VPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDI 180 (304)
T ss_dssp EECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred eECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHH
Confidence 87754211 0000 0 111 2110 00 0 0
Q ss_pred Hhc--------cccccCCCCCCEEEcC--CCcEEEEeccCccccCCCCCCceeeecccCCCcc---cccccccc-----C
Q 004935 530 IEA--------AKVHRDVKSTNILLSG--KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGY---LDPEYYIS-----N 591 (723)
Q Consensus 530 ~~~--------a~vH~Dlk~~NILl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y---~aPE~~~~-----~ 591 (723)
+.. ..+|+|+++.||++++ ...+.|.||+.+....... ........ ..|+.... +
T Consensus 181 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 181 LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-------DFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-------HHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-------HHHHHHhhccccCHHHHHHHHHHcC
Confidence 111 1299999999999998 4567899999887532110 00000011 12221110 1
Q ss_pred C---------CCChhhHHHHHHHHHHHHcCCCccc
Q 004935 592 R---------LTEKSDVYNFGVVLLEIITSKSVIE 617 (723)
Q Consensus 592 ~---------~~~~~DV~SfGvvL~elltg~~p~~ 617 (723)
. .....+.|+++.+++++.+|+.++.
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 1123689999999999999998764
No 372
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=97.94 E-value=5.2e-06 Score=86.52 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=40.7
Q ss_pred CceEEEEcCCCcccccCc----ccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 274 PRITSLNLSSSGIAGDIA----PYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip----~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
++|+.|+|++|.+++.+| ..+..+++|+.|+|++|++++..|..++.+++|+.|+|++|.+.+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 183 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLG 183 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCH
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCcc
Confidence 456666666666666555 334556666666666666666666666666667777776666554
No 373
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=97.93 E-value=6.2e-06 Score=87.60 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=31.1
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCc--cCCCCCCCcEEEccCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPD--FLSQLPFLTELNLKGT 332 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~--~l~~l~~L~~l~l~~n 332 (723)
++|+.|+|++|++++..+..++++++|++|+|++|++++ +|. .+.++++|+.|+|++|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEES
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCC
Confidence 355556666665553222235555566666666665552 333 4555556666665555
No 374
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=97.92 E-value=2.2e-05 Score=81.77 Aligned_cols=77 Identities=21% Similarity=0.323 Sum_probs=50.0
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhc-ccCccccccCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQ-KNGLLSLSVEG 352 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~-~~~~~~l~~~~ 352 (723)
++|+.|+|++|++++. |+ ++.+++|+.|+|++|++++ +|. +..+++|+.|+|++|.+++..+.. +..+..+.+.+
T Consensus 129 ~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~ 204 (308)
T 1h6u_A 129 SNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKN 204 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTT
T ss_pred CCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccC
Confidence 5677777777777753 33 7777777777777777775 333 777777777777777777654421 22344455555
Q ss_pred CC
Q 004935 353 NP 354 (723)
Q Consensus 353 n~ 354 (723)
|.
T Consensus 205 N~ 206 (308)
T 1h6u_A 205 NQ 206 (308)
T ss_dssp SC
T ss_pred Cc
Confidence 53
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=97.88 E-value=2.2e-05 Score=86.46 Aligned_cols=18 Identities=33% Similarity=0.525 Sum_probs=7.2
Q ss_pred CCCCCCCcEEEccCCCCC
Q 004935 318 LSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 318 l~~l~~L~~l~l~~n~~~ 335 (723)
++++++|+.|+|++|.++
T Consensus 191 ~~~l~~L~~L~l~~N~l~ 208 (454)
T 1jl5_A 191 LQNLPFLTAIYADNNSLK 208 (454)
T ss_dssp CTTCTTCCEEECCSSCCS
T ss_pred ccCCCCCCEEECCCCcCC
Confidence 333444444444444333
No 376
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=97.88 E-value=1.7e-05 Score=90.40 Aligned_cols=62 Identities=29% Similarity=0.422 Sum_probs=37.8
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++|+.|+|++|+|++ + +.++.|++|+.|+|++|+|++. ..++.|++|+.|+|++|.+++..|
T Consensus 109 ~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 109 KKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp TTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 456666666666664 2 3466666666666666666653 445666666666666666666555
No 377
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=97.87 E-value=1.4e-05 Score=83.34 Aligned_cols=117 Identities=15% Similarity=0.298 Sum_probs=75.3
Q ss_pred EEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCCC
Q 004935 222 EFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSIQ 301 (723)
Q Consensus 222 ~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L~ 301 (723)
.+.+..+.-..+|+ +..+..++.+.+..+....-.+ . ...++|+.|+|++|++++ +|+ ++.+++|+
T Consensus 111 ~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-----l------~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~ 176 (308)
T 1h6u_A 111 TLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP-----L------AGLTNLQYLSIGNAQVSD-LTP-LANLSKLT 176 (308)
T ss_dssp EEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG-----G------GGCTTCCEEECCSSCCCC-CGG-GTTCTTCC
T ss_pred EEECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc-----c------cCCCCccEEEccCCcCCC-Chh-hcCCCCCC
Confidence 34444444444544 5555656655554332222111 1 123579999999999986 555 89999999
Q ss_pred eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhc-ccCccccccCCCC
Q 004935 302 ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQ-KNGLLSLSVEGNP 354 (723)
Q Consensus 302 ~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~-~~~~~~l~~~~n~ 354 (723)
.|+|++|++++..| +..+++|+.|+|++|.+++..|.. +..+..+.+.+|+
T Consensus 177 ~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~ 228 (308)
T 1h6u_A 177 TLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQT 228 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEE
T ss_pred EEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCe
Confidence 99999999986544 788999999999999998866521 1133444555554
No 378
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=97.87 E-value=3.9e-06 Score=87.85 Aligned_cols=63 Identities=25% Similarity=0.359 Sum_probs=44.5
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCch
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLI 338 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~ 338 (723)
++|+.|+|++|++++..|..|+++++|+.|+|++|++++..| +..+++|+.|+|++|.+++..
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~ 96 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL 96 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc
Confidence 357777777777777666677777777777777777776554 677777777777777766543
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.86 E-value=4.5e-05 Score=87.18 Aligned_cols=72 Identities=19% Similarity=0.232 Sum_probs=42.1
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcccC---cccccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKNG---LLSLSV 350 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~~---~~~l~~ 350 (723)
++|+.|+|++|+|++ || ..+++|+.|+|++|+|+ .||. .+++|+.|+|++|.++ .+|..+.. +..+.+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 456666666666664 55 44566666666666666 4555 4566667777777666 44544432 233445
Q ss_pred CCCC
Q 004935 351 EGNP 354 (723)
Q Consensus 351 ~~n~ 354 (723)
.+|+
T Consensus 292 ~~N~ 295 (622)
T 3g06_A 292 EGNP 295 (622)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 5554
No 380
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=97.85 E-value=2.1e-05 Score=81.12 Aligned_cols=118 Identities=21% Similarity=0.235 Sum_probs=80.7
Q ss_pred EEEEEEcCCCCCcchhhhhhhhhhhhccccccccCCCceeecCccCCCCCCCCCceEEEEcCCCcccccCcccccCCCCC
Q 004935 221 IEFSINTTESSTLPPILNAYEIYRAKEFLQFLTNQQDAYLWQGLNCSYPEYDPPRITSLNLSSSGIAGDIAPYISTLTSI 300 (723)
Q Consensus 221 ~~lsl~~~~~s~lPp~inale~~~~~~~~~~~~~~~~~~~w~g~~c~~~~~~~~~l~~l~ls~n~l~g~ip~~~~~l~~L 300 (723)
..+.+..+.-..+++ +..+..++.+.+..+....-. + -...++|+.|+|++|++++ + +.++.|++|
T Consensus 71 ~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~-----~------l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L 136 (291)
T 1h6t_A 71 TKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLS-----S------LKDLKKLKSLSLEHNGISD-I-NGLVHLPQL 136 (291)
T ss_dssp CEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGG-----G------GTTCTTCCEEECTTSCCCC-C-GGGGGCTTC
T ss_pred CEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCCh-----h------hccCCCCCEEECCCCcCCC-C-hhhcCCCCC
Confidence 345555544455666 667777776665544322210 1 1123689999999999987 3 578999999
Q ss_pred CeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhc-ccCccccccCCCC
Q 004935 301 QILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQ-KNGLLSLSVEGNP 354 (723)
Q Consensus 301 ~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~-~~~~~~l~~~~n~ 354 (723)
+.|+|++|++++. ..++.+++|+.|+|++|.+++..|.. +..+..+...+|.
T Consensus 137 ~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 137 ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred CEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCc
Confidence 9999999999975 57889999999999999998876621 1234445566663
No 381
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.84 E-value=4.2e-05 Score=77.74 Aligned_cols=75 Identities=17% Similarity=0.122 Sum_probs=55.7
Q ss_pred ccccCcE-EEEEEEEC--CceEEEEEecCCChhhHHHHHHHHHHHHhcc-CCceeeEEEEEecCCceEEEEEeCCCCCHH
Q 004935 434 LGNGGFG-TVYHGYLD--GTEVAVKMLSPSSAQGYKQFQAEVELLMRIH-HKNLTTLVGYCDEGTNRGLIYEFMANGNLQ 509 (723)
Q Consensus 434 lG~G~~g-~Vy~~~~~--~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~ 509 (723)
+..|..| .||+.... +..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||++++.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 4445444 68987663 457899986533 3457889999999884 334678899999999999999999998775
Q ss_pred HH
Q 004935 510 AL 511 (723)
Q Consensus 510 ~~ 511 (723)
+.
T Consensus 109 ~~ 110 (272)
T 4gkh_A 109 QV 110 (272)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=97.83 E-value=3.6e-07 Score=88.76 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=36.3
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
++|+.|+|++|+++ .||..++.+++|+.|+|++|++++ +| .++.+++|+.|+|++|.+++
T Consensus 70 ~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp TTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 35666666666665 566656666666666666666664 44 45556666666666666654
No 383
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=97.82 E-value=3.9e-05 Score=84.60 Aligned_cols=59 Identities=22% Similarity=0.258 Sum_probs=33.8
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCch
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLI 338 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~ 338 (723)
++|+.|+|++|++++ +| ++++++|+.|+|++|+|++ +| ++++++|+.|+|++|...+.+
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~ 164 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL 164 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc
Confidence 456666666666665 33 5666666666666666665 33 556666666666666444433
No 384
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=97.81 E-value=2.4e-05 Score=79.48 Aligned_cols=59 Identities=24% Similarity=0.376 Sum_probs=38.7
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ 337 (723)
++|+.|+|++|++++ +|+ +++|++|+.|+|++|++++ +|.... ++|+.|+|++|.+++.
T Consensus 63 ~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~ 121 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRDT 121 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSBS
T ss_pred CCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCCC
Confidence 467777777777765 333 7777777777777777765 444322 6777777777777663
No 385
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=97.81 E-value=3e-05 Score=85.69 Aligned_cols=62 Identities=24% Similarity=0.210 Sum_probs=41.1
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++|+.|+|++|++++..| ++.+++|+.|+|++|++++. ..+.++++|+.|+|++|.+++..|
T Consensus 309 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 309 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 466666677666666544 66666777777777766654 356667777777777777776665
No 386
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=97.81 E-value=3e-05 Score=85.50 Aligned_cols=78 Identities=27% Similarity=0.267 Sum_probs=45.5
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCC-------CCcEEEccCCCCCCchhhcc-cCc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLP-------FLTELNLKGTIPNGLIEKQK-NGL 345 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~-------~L~~l~l~~n~~~g~~p~~~-~~~ 345 (723)
++|+.|+|++|+|+| || ++.+++|+.|+|++|+|+|..+..+.+|. +|+.|++++|.+.|.+|... ..+
T Consensus 212 ~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L 288 (457)
T 3bz5_A 212 IQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKI 288 (457)
T ss_dssp TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTC
T ss_pred CCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccC
Confidence 567777777777776 55 67777777777777777765444444443 34455555555555555321 233
Q ss_pred cccccCCCC
Q 004935 346 LSLSVEGNP 354 (723)
Q Consensus 346 ~~l~~~~n~ 354 (723)
..+...+|.
T Consensus 289 ~~L~Ls~n~ 297 (457)
T 3bz5_A 289 KELDVTHNT 297 (457)
T ss_dssp CCCCCTTCT
T ss_pred CEEECCCCc
Confidence 444455553
No 387
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=97.69 E-value=6.3e-05 Score=83.08 Aligned_cols=62 Identities=29% Similarity=0.388 Sum_probs=32.0
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchh
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIE 339 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p 339 (723)
++|+.|+|++|++++. |+ ++.+++|+.|+|++|++++..| ++.+++|+.|+|++|.+++..|
T Consensus 265 ~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 265 TKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp TTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred CCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 3455555555555542 22 5555555555555555554333 4555555555555555555443
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.68 E-value=2.3e-05 Score=83.13 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=70.8
Q ss_pred eeecCccCCCC------CCCCCceEEEEcCCCcccccCcc-cccCCCCCCeeeCcCCcCcCCCCc-cCCCCCCCcE-EEc
Q 004935 259 YLWQGLNCSYP------EYDPPRITSLNLSSSGIAGDIAP-YISTLTSIQILDLSNNNLTGPVPD-FLSQLPFLTE-LNL 329 (723)
Q Consensus 259 ~~w~g~~c~~~------~~~~~~l~~l~ls~n~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~iP~-~l~~l~~L~~-l~l 329 (723)
|.|..+.|+.. ...++.++.|+|++|+|+ .||+ .|++|++|+.|+|++|++.+.||. .+.+|++|+. +.+
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 56777888743 224468999999999999 5665 699999999999999999988885 5688888776 566
Q ss_pred cCCCCCCchhhcccCc---cccccCCC
Q 004935 330 KGTIPNGLIEKQKNGL---LSLSVEGN 353 (723)
Q Consensus 330 ~~n~~~g~~p~~~~~~---~~l~~~~n 353 (723)
++|.+++..|..+..+ ..+...+|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n 114 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNT 114 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEE
T ss_pred cCCcccccCchhhhhcccccccccccc
Confidence 7888888777665533 33444444
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.67 E-value=9.3e-06 Score=87.38 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=62.9
Q ss_pred CceEEEEcCCCccc----ccCcccccCCCCCCeeeCcCCcCcCC----CCccC--CCCCCCcEEEccCCCCCC----chh
Q 004935 274 PRITSLNLSSSGIA----GDIAPYISTLTSIQILDLSNNNLTGP----VPDFL--SQLPFLTELNLKGTIPNG----LIE 339 (723)
Q Consensus 274 ~~l~~l~ls~n~l~----g~ip~~~~~l~~L~~L~ls~N~l~g~----iP~~l--~~l~~L~~l~l~~n~~~g----~~p 339 (723)
++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++. +|..+ +++++|+.|+|++|.+++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 57888999999987 77888888889999999999988876 67766 448889999999998887 466
Q ss_pred hcc----cCccccccCCCC
Q 004935 340 KQK----NGLLSLSVEGNP 354 (723)
Q Consensus 340 ~~~----~~~~~l~~~~n~ 354 (723)
..+ ..+..+.+.+|.
T Consensus 296 ~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHHHHHCTTCCEEECTTSB
T ss_pred HHHHhcCCCceEEEccCCc
Confidence 544 345556666653
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.65 E-value=7.7e-06 Score=87.30 Aligned_cols=66 Identities=24% Similarity=0.179 Sum_probs=46.6
Q ss_pred ceEEEEcCCCcccccCcccccCC-----CCCCeeeCcCCcCcCCCCccCCCC-----CCCcEEEccCCCCCCchhh
Q 004935 275 RITSLNLSSSGIAGDIAPYISTL-----TSIQILDLSNNNLTGPVPDFLSQL-----PFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l-----~~L~~L~ls~N~l~g~iP~~l~~l-----~~L~~l~l~~n~~~g~~p~ 340 (723)
+|+.|+|++|++++..+..++.+ ++|+.|+|++|++++..+..++.+ ++|+.|+|++|.+++..+.
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 127 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSS 127 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHH
Confidence 57777777777777777776665 777777777777777766644433 6777777777777665543
No 391
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=97.64 E-value=9.3e-05 Score=78.05 Aligned_cols=78 Identities=21% Similarity=0.276 Sum_probs=54.0
Q ss_pred CCceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhccc---Cccccc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQKN---GLLSLS 349 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~---~~~~l~ 349 (723)
.++|+.|+|++|.+++ + +.+..+++|+.|+|++|++++. | .+..+++|+.|+|++|.+++..|..+. .+..+.
T Consensus 242 l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 3577788888887775 3 4677778888888888887763 3 467778888888888887777665543 334455
Q ss_pred cCCCC
Q 004935 350 VEGNP 354 (723)
Q Consensus 350 ~~~n~ 354 (723)
..+|+
T Consensus 318 L~~n~ 322 (347)
T 4fmz_A 318 LSQNH 322 (347)
T ss_dssp CCSSS
T ss_pred ccCCc
Confidence 55654
No 392
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.57 E-value=1.5e-05 Score=83.80 Aligned_cols=63 Identities=27% Similarity=0.316 Sum_probs=48.0
Q ss_pred CceEEEEcCCCccccc-CcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC-CCCC
Q 004935 274 PRITSLNLSSSGIAGD-IAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT-IPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~-ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n-~~~g 336 (723)
++|+.|+|++|.+++. +|..+..+++|+.|+|++|++++.+|..++++++|+.|+|++| .+++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~ 157 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE 157 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCH
Confidence 5677778887777766 7777777778888888877777777777777777888888777 5665
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=97.55 E-value=3.9e-06 Score=81.29 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=54.3
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
++|+.|+|++|++++ +| .++++++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~ 107 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS 107 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc
Confidence 478999999999997 88 9999999999999999998 789888888999999999999987
No 394
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.53 E-value=2.4e-05 Score=84.09 Aligned_cols=64 Identities=22% Similarity=0.360 Sum_probs=49.5
Q ss_pred CceEEEEcCCCccc--c---cCcccccCCCCCCeeeCcCCcCc----CCCCccCCCCCCCcEEEccCCCCCCc
Q 004935 274 PRITSLNLSSSGIA--G---DIAPYISTLTSIQILDLSNNNLT----GPVPDFLSQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 274 ~~l~~l~ls~n~l~--g---~ip~~~~~l~~L~~L~ls~N~l~----g~iP~~l~~l~~L~~l~l~~n~~~g~ 337 (723)
++|+.|+|++|+++ | .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 46788888888887 3 34457788888888888888886 67787788888888888888887765
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.46 E-value=2.9e-05 Score=78.57 Aligned_cols=78 Identities=26% Similarity=0.373 Sum_probs=58.6
Q ss_pred EEcCCCc---ccccCcccccCCCCCCeeeCcCCcCcC--CCCccCCCCCCCcEEEccCCCCCCchh-hccc--Ccccccc
Q 004935 279 LNLSSSG---IAGDIAPYISTLTSIQILDLSNNNLTG--PVPDFLSQLPFLTELNLKGTIPNGLIE-KQKN--GLLSLSV 350 (723)
Q Consensus 279 l~ls~n~---l~g~ip~~~~~l~~L~~L~ls~N~l~g--~iP~~l~~l~~L~~l~l~~n~~~g~~p-~~~~--~~~~l~~ 350 (723)
++++.|. +.+.++-...+|++|+.|+||+|+|++ .+|..+..+++|+.|+|++|.+++.-. ..+. .+..|.+
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L 227 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 227 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEEC
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEc
Confidence 5667773 444444444689999999999999999 788888899999999999999998621 1122 5566778
Q ss_pred CCCCCCC
Q 004935 351 EGNPDLC 357 (723)
Q Consensus 351 ~~n~~lc 357 (723)
.+|+ +|
T Consensus 228 ~~Np-l~ 233 (267)
T 3rw6_A 228 DGNS-LC 233 (267)
T ss_dssp TTST-TG
T ss_pred cCCc-Cc
Confidence 8887 44
No 396
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.45 E-value=0.00021 Score=75.72 Aligned_cols=81 Identities=21% Similarity=0.160 Sum_probs=65.6
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCc-cCCCCCCCcEEEccCCCCCCchhhcccCccccccCC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPD-FLSQLPFLTELNLKGTIPNGLIEKQKNGLLSLSVEG 352 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~-~l~~l~~L~~l~l~~n~~~g~~p~~~~~~~~l~~~~ 352 (723)
..++.|+|++|+|+ .||+.+...++|+.|+|++|+.-+.||. .+..+++|+.|+|++|.++...+..+.++..|...+
T Consensus 154 ~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~ 232 (350)
T 4ay9_X 154 FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 232 (350)
T ss_dssp SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTT
T ss_pred hhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhcc
Confidence 46899999999998 6888888889999999997666668886 578999999999999999976555566666666555
Q ss_pred CCC
Q 004935 353 NPD 355 (723)
Q Consensus 353 n~~ 355 (723)
+..
T Consensus 233 ~~~ 235 (350)
T 4ay9_X 233 TYN 235 (350)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 397
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.43 E-value=0.00031 Score=73.34 Aligned_cols=69 Identities=16% Similarity=0.195 Sum_probs=52.2
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccC----CceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH----KNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H----~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.++.|....||+. ++.+++|+.... .....+.+|.++|+.+.+ ..+.+++++ +..++||||+++.+
T Consensus 43 ~~l~~G~~n~vy~v---g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC---NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE---CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 46889999999998 778899987432 223568999999999976 223455554 56789999999988
Q ss_pred HH
Q 004935 508 LQ 509 (723)
Q Consensus 508 L~ 509 (723)
+.
T Consensus 114 l~ 115 (320)
T 3r70_A 114 IT 115 (320)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 398
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.36 E-value=0.0012 Score=70.27 Aligned_cols=73 Identities=11% Similarity=0.057 Sum_probs=57.2
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCc--eeeEEEEEecC-CceEEEEEeCCCCCH
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN--LTTLVGYCDEG-TNRGLIYEFMANGNL 508 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~~~~~-~~~~lV~Ey~~~gsL 508 (723)
+.++.|....+|+...+++.+++|+.... ..+..|+.++..+.... +.++++++... +..++||||+++.++
T Consensus 47 ~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDVGGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEECCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 45788999999999888889999988543 25889999999986543 45677777654 568999999997655
Q ss_pred H
Q 004935 509 Q 509 (723)
Q Consensus 509 ~ 509 (723)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 3
No 399
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.36 E-value=4.6e-05 Score=80.01 Aligned_cols=69 Identities=22% Similarity=0.186 Sum_probs=56.0
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCC-CCccCCCCCCCcEEEccCCCCCCchhhccc
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGP-VPDFLSQLPFLTELNLKGTIPNGLIEKQKN 343 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~-iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~ 343 (723)
+.++.|+|++|.+++.+|. +.++++|+.|+|++|++++. +|..+.++++|+.|+|++|.+++.++..+.
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~ 139 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLA 139 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHT
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHh
Confidence 5678888888888876655 56788899999999888876 888888888999999988888877776554
No 400
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.33 E-value=6.8e-05 Score=79.84 Aligned_cols=67 Identities=28% Similarity=0.255 Sum_probs=59.5
Q ss_pred CceEEEEcCCCcccccCc----ccccCCC-CCCeeeCcCCcCcCCCCccCCCC-----CCCcEEEccCCCCCCchhh
Q 004935 274 PRITSLNLSSSGIAGDIA----PYISTLT-SIQILDLSNNNLTGPVPDFLSQL-----PFLTELNLKGTIPNGLIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip----~~~~~l~-~L~~L~ls~N~l~g~iP~~l~~l-----~~L~~l~l~~n~~~g~~p~ 340 (723)
..|+.|+|++|++++.-+ ..+.+++ +|+.|+|++|++++..+..++.+ ++|+.|+|++|.+++..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~ 98 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSD 98 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHH
Confidence 469999999999998777 7788999 89999999999999988888775 9999999999999877665
No 401
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.17 E-value=0.0019 Score=66.87 Aligned_cols=74 Identities=19% Similarity=0.135 Sum_probs=56.0
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCC---ceeeEEEEEe-cCCceEEEEEeCCCCC
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK---NLTTLVGYCD-EGTNRGLIYEFMANGN 507 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~-~~~~~~lV~Ey~~~gs 507 (723)
+.++.|....||+. ++.+++|+-. .......+.+|+++|+.+.+. .+...+.++. ..+..++||||+++.+
T Consensus 25 ~~l~~G~~n~v~~v---g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV---NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE---CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 35788888899988 6788999853 233456789999999999753 3566777774 4556789999999988
Q ss_pred HHH
Q 004935 508 LQA 510 (723)
Q Consensus 508 L~~ 510 (723)
+.+
T Consensus 100 l~~ 102 (306)
T 3tdw_A 100 LGE 102 (306)
T ss_dssp CHH
T ss_pred Cch
Confidence 765
No 402
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=96.93 E-value=0.00016 Score=79.36 Aligned_cols=81 Identities=20% Similarity=0.142 Sum_probs=57.1
Q ss_pred CceEEEEcCCCccccc----CcccccCCCCCCeeeCcCCcCcCCCCccCCC-----CCCCcEEEccCCCCCC----chhh
Q 004935 274 PRITSLNLSSSGIAGD----IAPYISTLTSIQILDLSNNNLTGPVPDFLSQ-----LPFLTELNLKGTIPNG----LIEK 340 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~----ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~-----l~~L~~l~l~~n~~~g----~~p~ 340 (723)
++|+.|+|++|.+++. +|..+..+++|+.|+|++|++++..+..+++ .++|+.|+|++|.+++ .+|.
T Consensus 313 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 313 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred ccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 4788888888888875 6777777888888888888887765554443 6788888888888875 5555
Q ss_pred cc---cCccccccCCCC
Q 004935 341 QK---NGLLSLSVEGNP 354 (723)
Q Consensus 341 ~~---~~~~~l~~~~n~ 354 (723)
.+ ..+..+.+.+|.
T Consensus 393 ~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 393 TLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHCCCCCEEECCSSS
T ss_pred HHHhCCCccEEECCCCC
Confidence 43 244555666663
No 403
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.93 E-value=0.0019 Score=69.53 Aligned_cols=73 Identities=15% Similarity=0.209 Sum_probs=49.3
Q ss_pred hhccccCcEEEEEEEE--CCceEEEEEecCCCh-------hhHHHHHHHHHHHHhccC--Cc-eeeEEEEEecCCceEEE
Q 004935 432 RVLGNGGFGTVYHGYL--DGTEVAVKMLSPSSA-------QGYKQFQAEVELLMRIHH--KN-LTTLVGYCDEGTNRGLI 499 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~--~~~~vavK~~~~~~~-------~~~~~f~~Ei~~l~~l~H--~n-Iv~l~g~~~~~~~~~lV 499 (723)
+.||.|..+.||++.. .++.++||....... ....++..|.++|+.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 4689999999999965 457899998654321 122456789999988743 33 3455544 34456899
Q ss_pred EEeCCCC
Q 004935 500 YEFMANG 506 (723)
Q Consensus 500 ~Ey~~~g 506 (723)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999864
No 404
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.88 E-value=0.0023 Score=65.57 Aligned_cols=73 Identities=23% Similarity=0.231 Sum_probs=53.5
Q ss_pred hhccccCcEEEEEEEE-CCceEEEEEecCCChhhHHHHHHHHHHHHhccC---CceeeEEEEEecCCceEEEEEeCCCCC
Q 004935 432 RVLGNGGFGTVYHGYL-DGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH---KNLTTLVGYCDEGTNRGLIYEFMANGN 507 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H---~nIv~l~g~~~~~~~~~lV~Ey~~~gs 507 (723)
+.+|.|..+.||+..+ +|+.|.+|+...........|..|++.|+.+.. -.+.+.+++. ..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 4589999999999998 567999998765544434568899999998842 2344555542 3478999998765
Q ss_pred H
Q 004935 508 L 508 (723)
Q Consensus 508 L 508 (723)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=96.88 E-value=0.00017 Score=79.21 Aligned_cols=80 Identities=16% Similarity=0.169 Sum_probs=58.4
Q ss_pred CceEEEEcCCCcccccCcccccCC-----CCCCeeeCcCCcCcCC----CCccCCCCCCCcEEEccCCCCCCchhhccc-
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTL-----TSIQILDLSNNNLTGP----VPDFLSQLPFLTELNLKGTIPNGLIEKQKN- 343 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l-----~~L~~L~ls~N~l~g~----iP~~l~~l~~L~~l~l~~n~~~g~~p~~~~- 343 (723)
++|+.|+|++|.+++..+..++.. ++|+.|+|++|++++. +|..+..+++|+.|+|++|.+++..+..+.
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 578889999998887666555443 6889999999988876 677777888899999988888765444322
Q ss_pred -------CccccccCCC
Q 004935 344 -------GLLSLSVEGN 353 (723)
Q Consensus 344 -------~~~~l~~~~n 353 (723)
.+..+...+|
T Consensus 364 ~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHTSTTCCCCEEECTTS
T ss_pred HHcCCCCceEEEECCCC
Confidence 4455566665
No 406
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.88 E-value=0.0038 Score=64.72 Aligned_cols=74 Identities=19% Similarity=0.161 Sum_probs=61.0
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhcc---CCceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIH---HKNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.|+.|....+|+...+++.+++|+.... ....|..|.+.|+.+. ...+.+.++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 35788999999999888889999987643 3467899999999884 35688899998888889999999998765
No 407
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=96.76 E-value=0.00036 Score=74.54 Aligned_cols=81 Identities=22% Similarity=0.147 Sum_probs=55.2
Q ss_pred CceEEEEcCCCcccc----cCcccccCCCCCCeeeCcCCcCcCC----CCccCCCCCCCcEEEccCCCCCCchhhc----
Q 004935 274 PRITSLNLSSSGIAG----DIAPYISTLTSIQILDLSNNNLTGP----VPDFLSQLPFLTELNLKGTIPNGLIEKQ---- 341 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~----iP~~l~~l~~L~~l~l~~n~~~g~~p~~---- 341 (723)
+.|+.|+|++|+|+. .++..+..+++|++|+|++|+|+.. ++..+...++|+.|+|++|.++......
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 468888888888865 3556667788888888888888742 4556667778888888888887532221
Q ss_pred c---cCccccccCCCC
Q 004935 342 K---NGLLSLSVEGNP 354 (723)
Q Consensus 342 ~---~~~~~l~~~~n~ 354 (723)
+ ..+..+.+++|.
T Consensus 235 L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 235 AREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHCSSCCEEECTTSS
T ss_pred HHhCCCCCEEeccCCC
Confidence 1 244555666653
No 408
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.67 E-value=0.004 Score=65.12 Aligned_cols=72 Identities=15% Similarity=0.232 Sum_probs=43.2
Q ss_pred hccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCC--ceeeEEE------EEecCCceEEEEEeCC
Q 004935 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHK--NLTTLVG------YCDEGTNRGLIYEFMA 504 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~--nIv~l~g------~~~~~~~~~lV~Ey~~ 504 (723)
.|+.|..+.||+...+++.+++|+.... ..++..|+.+++.+... .+.+++. +....+..++++||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 4556778899999888778999998752 13344556666655311 2233332 1123566789999999
Q ss_pred CCCH
Q 004935 505 NGNL 508 (723)
Q Consensus 505 ~gsL 508 (723)
+..+
T Consensus 115 G~~~ 118 (346)
T 2q83_A 115 GRPF 118 (346)
T ss_dssp CBCC
T ss_pred CccC
Confidence 8654
No 409
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.56 E-value=0.0015 Score=69.04 Aligned_cols=78 Identities=4% Similarity=-0.008 Sum_probs=55.6
Q ss_pred hhc-cccCcEEEEEEEEC--------CceEEEEEecCCC---hhhHHHHHHHHHHHHhccC---CceeeEEEEEecC---
Q 004935 432 RVL-GNGGFGTVYHGYLD--------GTEVAVKMLSPSS---AQGYKQFQAEVELLMRIHH---KNLTTLVGYCDEG--- 493 (723)
Q Consensus 432 ~~l-G~G~~g~Vy~~~~~--------~~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H---~nIv~l~g~~~~~--- 493 (723)
+.| +.|....+|+.... ++.+++|+..... ......+.+|+.+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 356 78888999998765 6689999865432 1012457889999988843 3567788888665
Q ss_pred CceEEEEEeCCCCCHH
Q 004935 494 TNRGLIYEFMANGNLQ 509 (723)
Q Consensus 494 ~~~~lV~Ey~~~gsL~ 509 (723)
+..++||||+++..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 410
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.36 E-value=0.0046 Score=55.10 Aligned_cols=56 Identities=23% Similarity=0.312 Sum_probs=44.6
Q ss_pred EEEcCCCccc-ccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCC
Q 004935 278 SLNLSSSGIA-GDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 278 ~l~ls~n~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~ 335 (723)
.++.++++|+ -.||..|- ++|+.|+|++|+|+.--+..+..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6788899997 57776532 46899999999999655556788999999999988764
No 411
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=96.29 E-value=0.00084 Score=71.64 Aligned_cols=69 Identities=17% Similarity=0.145 Sum_probs=56.9
Q ss_pred CceEEEEcCCCcccc----cCcccccCCCCCCeeeCcCCcCcC----CCCccCCCCCCCcEEEccCCCCCCchhhcc
Q 004935 274 PRITSLNLSSSGIAG----DIAPYISTLTSIQILDLSNNNLTG----PVPDFLSQLPFLTELNLKGTIPNGLIEKQK 342 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g----~ip~~~~~l~~L~~L~ls~N~l~g----~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~ 342 (723)
+.|+.|+|++|+|+. .|+..+..+++|+.|+|++|+++. .++..+...++|+.|+|++|.++......+
T Consensus 183 ~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 183 TSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 579999999999986 357778889999999999999985 355556678999999999999886554443
No 412
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.15 E-value=0.00078 Score=76.45 Aligned_cols=61 Identities=15% Similarity=0.237 Sum_probs=27.5
Q ss_pred ceEEEEcCCC--cccccCcccccC-CCCCCeeeCcCCcCcC-CCCccCCCCCCCcEEEccCCCCC
Q 004935 275 RITSLNLSSS--GIAGDIAPYIST-LTSIQILDLSNNNLTG-PVPDFLSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 275 ~l~~l~ls~n--~l~g~ip~~~~~-l~~L~~L~ls~N~l~g-~iP~~l~~l~~L~~l~l~~n~~~ 335 (723)
+|+.|+|+.+ .+++..+..++. +++|+.|+|++|++++ .+|..+..+++|+.|+|++|.++
T Consensus 437 ~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 437 KLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp TCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred CCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 4455555422 244444444332 4445555555555444 23333444455555555555443
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=95.97 E-value=0.0018 Score=61.56 Aligned_cols=64 Identities=13% Similarity=0.225 Sum_probs=41.8
Q ss_pred CceEEEEcCCCcccc----cCcccccCCCCCCeeeCcCCcCcCC----CCccCCCCCCCcEEEc--cCCCCCCc
Q 004935 274 PRITSLNLSSSGIAG----DIAPYISTLTSIQILDLSNNNLTGP----VPDFLSQLPFLTELNL--KGTIPNGL 337 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~----iP~~l~~l~~L~~l~l--~~n~~~g~ 337 (723)
+.|+.|+|++|++.. .|...+...++|+.|+|++|+++.. |...+...++|+.|+| ++|.+...
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 357777777777754 2444555567777777777777643 4555666677777777 66776643
No 414
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=95.89 E-value=0.016 Score=62.80 Aligned_cols=72 Identities=11% Similarity=0.134 Sum_probs=46.3
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCC----h-----hhHHHHHHHHHHHHh-ccCCceeeEEEEEecCCceEEEEE
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSS----A-----QGYKQFQAEVELLMR-IHHKNLTTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~----~-----~~~~~f~~Ei~~l~~-l~H~nIv~l~g~~~~~~~~~lV~E 501 (723)
+.||.|..+.||+...+++.++||...+.. . .....+..|+..+.. ..+..+.+++.+. .+..++|||
T Consensus 40 ~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~e 117 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGMR 117 (420)
T ss_dssp EECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEEC
T ss_pred EEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEEe
Confidence 458889999999998777799999533210 0 122344444443322 2334566777665 466789999
Q ss_pred eC-CC
Q 004935 502 FM-AN 505 (723)
Q Consensus 502 y~-~~ 505 (723)
|+ ++
T Consensus 118 ~l~~g 122 (420)
T 2pyw_A 118 YLEPP 122 (420)
T ss_dssp CCCTT
T ss_pred ecCCc
Confidence 99 76
No 415
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.82 E-value=0.015 Score=60.24 Aligned_cols=74 Identities=8% Similarity=0.041 Sum_probs=44.8
Q ss_pred hccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCce--eeEEEE------EecCCceEEEEEeCC
Q 004935 433 VLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL--TTLVGY------CDEGTNRGLIYEFMA 504 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI--v~l~g~------~~~~~~~~lV~Ey~~ 504 (723)
.|+.|....+|+...+++.+++|+..... ...++..|+.++..+....+ .+++.. ....+..+++++|++
T Consensus 29 ~i~~G~~n~~~~v~~~~g~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~ 106 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE 106 (322)
T ss_dssp EECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred ccCCCcccceEEEEeCCccEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCC
Confidence 46678888999998877789999987631 12345678888877743222 233321 112345689999999
Q ss_pred CCCH
Q 004935 505 NGNL 508 (723)
Q Consensus 505 ~gsL 508 (723)
+..+
T Consensus 107 G~~~ 110 (322)
T 2ppq_A 107 GMWL 110 (322)
T ss_dssp CBCC
T ss_pred CcCC
Confidence 8653
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.49 E-value=0.0017 Score=68.85 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=52.0
Q ss_pred CCceEEEEcCCCcccccCccccc---CCCCCCeeeCcCCcCcCC----CCccCCCCCCCcEEEccCCCCCCc
Q 004935 273 PPRITSLNLSSSGIAGDIAPYIS---TLTSIQILDLSNNNLTGP----VPDFLSQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~ip~~~~---~l~~L~~L~ls~N~l~g~----iP~~l~~l~~L~~l~l~~n~~~g~ 337 (723)
.|+|+.|+|++|.++...+..+. .+++|++|+|+.|+|++. ++..+..+++|+.|+|++|.++..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 47899999999999876665554 578999999999999874 555556789999999998887654
No 417
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.32 E-value=0.002 Score=73.06 Aligned_cols=63 Identities=11% Similarity=0.134 Sum_probs=36.3
Q ss_pred CceEEEEcCCCccccc----CcccccCCCCCCeeeCcCCcCc----CCCCccCCCCCCCcEEEccCCCCCC
Q 004935 274 PRITSLNLSSSGIAGD----IAPYISTLTSIQILDLSNNNLT----GPVPDFLSQLPFLTELNLKGTIPNG 336 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~----ip~~~~~l~~L~~L~ls~N~l~----g~iP~~l~~l~~L~~l~l~~n~~~g 336 (723)
++|+.|+|++|.+++. ++..+.++++|+.|+|++|+++ +.++..+.++++|+.|+|++|.+.+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 3566666666666554 4444555666666666666665 3344444556666666666655554
No 418
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.31 E-value=0.012 Score=62.54 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=44.4
Q ss_pred hccccCcEEEEEEEEC---------CceEEEEEecCCChhhHHHHHHHHHHHHhccCCc-eeeEEEEEecCCceEEEEEe
Q 004935 433 VLGNGGFGTVYHGYLD---------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN-LTTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n-Iv~l~g~~~~~~~~~lV~Ey 502 (723)
.|..|-...+|+.... ++.+++|+.... ......+.+|.++++.+...+ ..++++++.+ .+|+||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 4556777788998764 368999986432 223456779999998884333 3566776654 399999
Q ss_pred CCCCCH
Q 004935 503 MANGNL 508 (723)
Q Consensus 503 ~~~gsL 508 (723)
+++.+|
T Consensus 132 i~G~~l 137 (379)
T 3feg_A 132 IPSRPL 137 (379)
T ss_dssp CSEEEC
T ss_pred ecCccC
Confidence 997655
No 419
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.24 E-value=0.012 Score=64.04 Aligned_cols=71 Identities=15% Similarity=0.253 Sum_probs=49.4
Q ss_pred hhccccCcEEEEEEEEC---------CceEEEEEecCCChhhHHHHHHHHHHHHhccCCce-eeEEEEEecCCceEEEEE
Q 004935 432 RVLGNGGFGTVYHGYLD---------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL-TTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~lV~E 501 (723)
+.|+.|....+|+.... ++.+++|+...... ...+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 35778888999999874 36899999854211 2455689999998854444 567776543 38999
Q ss_pred eCCCCCH
Q 004935 502 FMANGNL 508 (723)
Q Consensus 502 y~~~gsL 508 (723)
|+++.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 420
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.08 E-value=0.011 Score=60.81 Aligned_cols=70 Identities=6% Similarity=0.096 Sum_probs=45.0
Q ss_pred hhccccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccCCce-eeEEEEEecCCceEEEEEeC-CCCCH
Q 004935 432 RVLGNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL-TTLVGYCDEGTNRGLIYEFM-ANGNL 508 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~-~~gsL 508 (723)
+.|+.|....+|+. +.+++|+....... ......|+.+++.+....+ .++++++ .+..++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 45788989999998 67889988754221 1223568888887753333 3555543 33457899999 55444
No 421
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=94.82 E-value=0.0037 Score=70.84 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=38.6
Q ss_pred CceEEEEcCCCcccccCcccccC-CCCCCeeeCcCCcCcCCCCccC-CCCCCCcEEEccCCCCCCc
Q 004935 274 PRITSLNLSSSGIAGDIAPYIST-LTSIQILDLSNNNLTGPVPDFL-SQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~-l~~L~~L~ls~N~l~g~iP~~l-~~l~~L~~l~l~~n~~~g~ 337 (723)
++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.
T Consensus 432 ~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 432 KDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp TTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred CCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 3566666655 566555555555 6667777777776665544444 4566777777777666443
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=94.73 E-value=0.0059 Score=57.98 Aligned_cols=62 Identities=21% Similarity=0.263 Sum_probs=51.4
Q ss_pred CceEEEEcCCCccccc----CcccccCCCCCCeeeC--cCCcCcCC----CCccCCCCCCCcEEEccCCCCC
Q 004935 274 PRITSLNLSSSGIAGD----IAPYISTLTSIQILDL--SNNNLTGP----VPDFLSQLPFLTELNLKGTIPN 335 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~----ip~~~~~l~~L~~L~l--s~N~l~g~----iP~~l~~l~~L~~l~l~~n~~~ 335 (723)
+.|+.|+|++|+++.. |...+...++|+.|+| ++|.++.. +-..+...++|+.|+|++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4699999999999874 6778888999999999 88999855 3445566789999999998764
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=94.57 E-value=0.035 Score=49.24 Aligned_cols=39 Identities=21% Similarity=0.384 Sum_probs=33.8
Q ss_pred CCCceEEEEcCCCcccccCcc-cccCCCCCCeeeCcCCcCc
Q 004935 272 DPPRITSLNLSSSGIAGDIAP-YISTLTSIQILDLSNNNLT 311 (723)
Q Consensus 272 ~~~~l~~l~ls~n~l~g~ip~-~~~~l~~L~~L~ls~N~l~ 311 (723)
.+++++.|+|++|+|+. ||+ .|..|++|+.|+|++|.+.
T Consensus 29 lp~~l~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 29 FPVDTTELVLTGNNLTA-LPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CCTTCSEEECTTSCCSS-CCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCcCCCEEECCCCcCCc-cChhhhhhccccCEEEecCCCee
Confidence 45689999999999995 654 5899999999999999875
No 424
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=94.31 E-value=0.005 Score=69.68 Aligned_cols=60 Identities=27% Similarity=0.352 Sum_probs=43.6
Q ss_pred CceEEEEcCCC-ccccc-CcccccCCCCCCeeeCcCCcCcCCCCccCC----CCCCCcEEEccCCC
Q 004935 274 PRITSLNLSSS-GIAGD-IAPYISTLTSIQILDLSNNNLTGPVPDFLS----QLPFLTELNLKGTI 333 (723)
Q Consensus 274 ~~l~~l~ls~n-~l~g~-ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~----~l~~L~~l~l~~n~ 333 (723)
++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+. .+++|+.|+|++|.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA 195 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC
Confidence 47888888888 55543 455556788888888888888776554443 56688888888775
No 425
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=93.80 E-value=0.053 Score=59.23 Aligned_cols=72 Identities=15% Similarity=0.228 Sum_probs=48.3
Q ss_pred hhccccCcEEEEEEEECC--ceEEEEEecCCChhhHHHHHHHHHHHHhccCCce-eeEEEEEecCCceEEEEEeCCCCCH
Q 004935 432 RVLGNGGFGTVYHGYLDG--TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL-TTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 432 ~~lG~G~~g~Vy~~~~~~--~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
+.|+.|-...+|+....+ ..+++|+....... ..+...|..+++.+...++ .++++++.. .+|+||+++.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 457788889999999876 78999987543211 1122689999999965555 467777632 369999987544
No 426
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=93.33 E-value=0.14 Score=53.03 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=40.3
Q ss_pred hccccCcEE-EEEEEEC-CceEEEEEecCCChhhHHHHHHHHHHHHhccC--CceeeEEEEEecCCceEEEEEeCCCCCH
Q 004935 433 VLGNGGFGT-VYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH--KNLTTLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 433 ~lG~G~~g~-Vy~~~~~-~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H--~nIv~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
.|+.|.... +|+.... ++.+++|....... ..+..|+.+++.+.. -.+.+++.++... .+++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 354454444 6677664 67788877554321 234567777777642 2345677665433 3789999987666
Q ss_pred HHH
Q 004935 509 QAL 511 (723)
Q Consensus 509 ~~~ 511 (723)
.+.
T Consensus 100 ~~~ 102 (333)
T 3csv_A 100 TEV 102 (333)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.28 E-value=0.07 Score=55.23 Aligned_cols=72 Identities=13% Similarity=0.133 Sum_probs=46.2
Q ss_pred ccccCcEEEEEEEEC-CceEEEEEecCCChhhHHHHHHHHHHHHhccCCc--eeeEEEE-----EecCCceEEEEEeCCC
Q 004935 434 LGNGGFGTVYHGYLD-GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKN--LTTLVGY-----CDEGTNRGLIYEFMAN 505 (723)
Q Consensus 434 lG~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~-----~~~~~~~~lV~Ey~~~ 505 (723)
++ |....||+...+ |+.+++|+...... ....+..|..++..+.... +++++.. ....+..++++||+++
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 55 777889988764 45799999874321 2356777888888874322 3334432 1123455789999987
Q ss_pred CC
Q 004935 506 GN 507 (723)
Q Consensus 506 gs 507 (723)
..
T Consensus 112 ~~ 113 (328)
T 1zyl_A 112 RQ 113 (328)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 428
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=92.95 E-value=0.071 Score=56.34 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=44.4
Q ss_pred hccccCcEEEEEEEECC----------ceEEEEEecCCChhhHHHHHHHHHHHHhccCCce-eeEEEEEecCCceEEEEE
Q 004935 433 VLGNGGFGTVYHGYLDG----------TEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL-TTLVGYCDEGTNRGLIYE 501 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~~----------~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~lV~E 501 (723)
.|+.|....+|+....+ +.+++|+...... ...+...|.++++.+...++ .++++.. ..++|||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~e 114 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIEE 114 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEEE
Confidence 56778788999988754 6888988765322 11234678888888854443 4566544 2378999
Q ss_pred eCCCCCH
Q 004935 502 FMANGNL 508 (723)
Q Consensus 502 y~~~gsL 508 (723)
|+++..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 429
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=92.50 E-value=0.17 Score=47.18 Aligned_cols=61 Identities=15% Similarity=0.093 Sum_probs=41.5
Q ss_pred CCCcEEEEEcCeEE-EEEec---CCCCccEEEEEEEe-------------cCCCcEEEEEEecCCCCcceeeeeeeeC
Q 004935 10 KPPSFDIILEADVW-DSIEF---EDESTIVTKEIIHI-------------PQKNFVYVCLVNKGSGTPFISAIELRPL 70 (723)
Q Consensus 10 ~~p~Fd~~~~~~~w-~~v~~---~~~~~~~~~e~i~~-------------~~~~~~~vCl~~~~~~~Pfis~lel~~l 70 (723)
...+||+++++..- .-.++ .....+++.++.+. ..++.+.|.|.+...+.||||+||+.+-
T Consensus 94 ~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~~~ 171 (174)
T 2jwp_A 94 QQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMKG 171 (174)
T ss_dssp SSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEESS
T ss_pred CCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEEeC
Confidence 45689999999653 33343 12234566666554 3566788999864466799999999874
No 430
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.28 E-value=0.13 Score=54.99 Aligned_cols=72 Identities=14% Similarity=0.227 Sum_probs=44.7
Q ss_pred hccccCcEEEEEEEECC---------ceEEEEEecCCChh-----------hH-------HHHHHHHHHHHhccCCc-ee
Q 004935 433 VLGNGGFGTVYHGYLDG---------TEVAVKMLSPSSAQ-----------GY-------KQFQAEVELLMRIHHKN-LT 484 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~~---------~~vavK~~~~~~~~-----------~~-------~~f~~Ei~~l~~l~H~n-Iv 484 (723)
.|..|-...+|+....+ ..|.+++.-..... .. .....|.++++.+...+ ..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45567778899887742 57888887543211 01 12235888988885444 45
Q ss_pred eEEEEEecCCceEEEEEeCCCCCH
Q 004935 485 TLVGYCDEGTNRGLIYEFMANGNL 508 (723)
Q Consensus 485 ~l~g~~~~~~~~~lV~Ey~~~gsL 508 (723)
++++++.+ .+|+||+++-+|
T Consensus 139 kl~~~~~~----G~i~efI~G~~L 158 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRL 158 (401)
T ss_dssp CEEEEETT----EEEEECCCEEEC
T ss_pred eEEEEeCC----CeEEEecCCccC
Confidence 67776643 289999996554
No 431
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=91.92 E-value=0.17 Score=52.49 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=45.6
Q ss_pred CceEEEEcCCCcccccCcc-cccCCCCCCeeeCcCCcCcCCCCccCCCCCCCc-EEEccC
Q 004935 274 PRITSLNLSSSGIAGDIAP-YISTLTSIQILDLSNNNLTGPVPDFLSQLPFLT-ELNLKG 331 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~-~l~l~~ 331 (723)
++|+.|+|++|+++ .||+ .|.+|++|+.|+|++| ++---+..+.++++|+ .|+|++
T Consensus 226 ~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 226 PNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp TTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred CCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 47999999999988 5665 5899999999999998 6643345688899999 999887
No 432
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=91.58 E-value=0.47 Score=49.40 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=43.5
Q ss_pred cccCcEEEEEEEECCceEEEEEecCCChhhHHHHHHHHHHHHhccC---CceeeEEEE------EecCCceEEEEEeCCC
Q 004935 435 GNGGFGTVYHGYLDGTEVAVKMLSPSSAQGYKQFQAEVELLMRIHH---KNLTTLVGY------CDEGTNRGLIYEFMAN 505 (723)
Q Consensus 435 G~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H---~nIv~l~g~------~~~~~~~~lV~Ey~~~ 505 (723)
|.|....||+...+++.+++|+...... ..|+.++..+.. +.+.+.+.. ....+..++||+|+++
T Consensus 32 G~g~~N~vy~v~~~~g~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESKSYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSCEEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCCCEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444689999987666999998765442 356666666532 223444432 2234667899999998
Q ss_pred CCH
Q 004935 506 GNL 508 (723)
Q Consensus 506 gsL 508 (723)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 433
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=90.47 E-value=0.25 Score=51.07 Aligned_cols=66 Identities=14% Similarity=0.076 Sum_probs=53.2
Q ss_pred CceEEEEcCCCcccccCc-ccccCCCCCC-eeeCcCCcCcCCCCccCCCCCCCcEEEccCCCCCCchhhcc
Q 004935 274 PRITSLNLSSSGIAGDIA-PYISTLTSIQ-ILDLSNNNLTGPVPDFLSQLPFLTELNLKGTIPNGLIEKQK 342 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip-~~~~~l~~L~-~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~~p~~~ 342 (723)
.+|+.|+|++| ++ .|+ ..|.+|++|+ .|+|.+ +++-.-+..+.++++|+.|+|++|.++..-+..+
T Consensus 250 ~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF 317 (329)
T 3sb4_A 250 KYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELF 317 (329)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTT
T ss_pred CCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhh
Confidence 47999999998 66 466 4599999999 999998 7774445789999999999999988876544433
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=90.40 E-value=0.059 Score=50.37 Aligned_cols=62 Identities=16% Similarity=0.140 Sum_probs=45.4
Q ss_pred CceEEEEcCCCcccccCcccccCCCCCCeeeCcCCc-CcCCCCccCCCC----CCCcEEEccCCC-CC
Q 004935 274 PRITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNN-LTGPVPDFLSQL----PFLTELNLKGTI-PN 335 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~-l~g~iP~~l~~l----~~L~~l~l~~n~-~~ 335 (723)
.+|+.||||++.++-.=-..+..|++|+.|+|+++. ++..-=..|+++ ++|+.|+|+++. ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 479999999998876545567889999999999984 664333345554 479999998863 54
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=86.48 E-value=0.27 Score=46.77 Aligned_cols=64 Identities=13% Similarity=0.258 Sum_probs=41.4
Q ss_pred CceEEEEcCCC-cccc----cCcccccCCCCCCeeeCcCCcCcCC----CCccCCCCCCCcEEEccCCCCCCc
Q 004935 274 PRITSLNLSSS-GIAG----DIAPYISTLTSIQILDLSNNNLTGP----VPDFLSQLPFLTELNLKGTIPNGL 337 (723)
Q Consensus 274 ~~l~~l~ls~n-~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~----iP~~l~~l~~L~~l~l~~n~~~g~ 337 (723)
+.|+.|+|++| ++.. .|-..+..-+.|+.|+|++|++... |-..|..-+.|+.|+|++|.+...
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 46778888875 6542 2445566667788888888887622 223333456788888888877654
No 436
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=82.80 E-value=0.8 Score=49.21 Aligned_cols=71 Identities=11% Similarity=0.225 Sum_probs=47.4
Q ss_pred hccccCcEEEEEEEEC---------CceEEEEEecCCChhhHHHHHHHHHHHHhccCCce-eeEEEEEecCCceEEEEEe
Q 004935 433 VLGNGGFGTVYHGYLD---------GTEVAVKMLSPSSAQGYKQFQAEVELLMRIHHKNL-TTLVGYCDEGTNRGLIYEF 502 (723)
Q Consensus 433 ~lG~G~~g~Vy~~~~~---------~~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~lV~Ey 502 (723)
.+..|-...+|+.... +..+++|+....... ..+..+|.++++.+...++ .++++.+. .++|+||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEE
Confidence 4666777889998876 578999997554321 1234678888888853333 45555432 3789999
Q ss_pred CCCCCH
Q 004935 503 MANGNL 508 (723)
Q Consensus 503 ~~~gsL 508 (723)
+++.+|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998654
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=81.37 E-value=0.52 Score=44.77 Aligned_cols=59 Identities=19% Similarity=0.265 Sum_probs=45.3
Q ss_pred CceEEEEcCCCccccc----CcccccCCCCCCeeeCcCCcCcCC----CCccCCCCCCCcEEEccCC
Q 004935 274 PRITSLNLSSSGIAGD----IAPYISTLTSIQILDLSNNNLTGP----VPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 274 ~~l~~l~ls~n~l~g~----ip~~~~~l~~L~~L~ls~N~l~g~----iP~~l~~l~~L~~l~l~~n 332 (723)
..|+.|+|++|++... |...+..=+.|+.|+|++|+++.. |=..|..-+.|+.|+|++|
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 4699999999999843 344555678999999999999844 2334555677999999865
No 438
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=80.00 E-value=0.47 Score=49.93 Aligned_cols=59 Identities=10% Similarity=0.352 Sum_probs=43.8
Q ss_pred CCceEEEEcCCCccccc----CcccccCCCCCCeeeCcCCcCcCCCCccCCC-CCCCcEEEccCCC
Q 004935 273 PPRITSLNLSSSGIAGD----IAPYISTLTSIQILDLSNNNLTGPVPDFLSQ-LPFLTELNLKGTI 333 (723)
Q Consensus 273 ~~~l~~l~ls~n~l~g~----ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~-l~~L~~l~l~~n~ 333 (723)
.++|+.|+|+.|.|++. |+..+.++++|+.|+|++|.++...=..|.+ + ...++++++.
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 36899999999999884 6666778999999999999987543222322 2 3457777665
No 439
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=79.13 E-value=0.24 Score=46.26 Aligned_cols=60 Identities=17% Similarity=0.111 Sum_probs=44.9
Q ss_pred CceEEEEcCCCc-ccccCcccccCC----CCCCeeeCcCCc-CcCCCCccCCCCCCCcEEEccCCC
Q 004935 274 PRITSLNLSSSG-IAGDIAPYISTL----TSIQILDLSNNN-LTGPVPDFLSQLPFLTELNLKGTI 333 (723)
Q Consensus 274 ~~l~~l~ls~n~-l~g~ip~~~~~l----~~L~~L~ls~N~-l~g~iP~~l~~l~~L~~l~l~~n~ 333 (723)
++|+.|+|+++. ++..-=..|+.+ ++|+.|+|+++. +|..==..|.++++|+.|+|++..
T Consensus 85 ~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 85 QYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp SCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 589999999985 765444456665 479999999974 764333457789999999998753
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=76.72 E-value=5.7 Score=38.13 Aligned_cols=156 Identities=10% Similarity=0.067 Sum_probs=74.5
Q ss_pred CCHHHHhccCCCCCCCHHHHHHHHHhccc----------cccC-CCCCCEEEcCCCcEEEEeccCccccCCCCCCceeee
Q 004935 506 GNLQALLLGEEADILSWEGRLRIAIEAAK----------VHRD-VKSTNILLSGKFQAKIADFGLSRTFPVEGSGTHVTT 574 (723)
Q Consensus 506 gsL~~~l~~~~~~~l~~~~~l~i~~~~a~----------vH~D-lk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 574 (723)
-||.+.|..... .++-.+...++.+.+. -|.. +.|..|+|..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~-PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ-PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHHcCC-CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 378888875433 3443333333333322 1233 445788899998887764 1110
Q ss_pred cccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCccccC-cccccHHHHHHHHhcCCCcccccCCcccCCC-CH
Q 004935 575 TIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIERT-HERIHITQWVSFMLGKGDIESIVDPRLHEDF-DI 652 (723)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~i~d~~l~~~~-~~ 652 (723)
.....+.|||... ...+.+.=|||+|++||..+--..|-+.. .-...+.+.+..|.....-....|..+...- ..
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~ 174 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGL 174 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTCCC----------------
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhccccccccccccccccccc
Confidence 1122356788763 45678899999999999988755443322 2222344445555433211112233332100 00
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHhhh
Q 004935 653 NSVWKTVEIAMACVSQTSTKRPTMNQVVMELNESLA 688 (723)
Q Consensus 653 ~~~~~l~~l~~~Cl~~~p~~RPsm~evl~~L~~~~~ 688 (723)
++-. + ...+..|++.++|++.=..-+.
T Consensus 175 ~d~~---~------~~~~~~~~sl~~Vi~~C~~hl~ 201 (229)
T 2yle_A 175 GDED---E------KRKISAIRSYRDVMKLCAAHLP 201 (229)
T ss_dssp -------C------CSCCCCCCSHHHHHHHHHTTSS
T ss_pred cccc---c------cccccCcCCHHHHHHHHHhhcc
Confidence 0000 0 2467889999999876655443
No 441
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=75.24 E-value=2.8 Score=44.58 Aligned_cols=28 Identities=39% Similarity=0.493 Sum_probs=24.0
Q ss_pred cccCCCCCCEEE------cCCCcEEEEeccCccc
Q 004935 535 VHRDVKSTNILL------SGKFQAKIADFGLSRT 562 (723)
Q Consensus 535 vH~Dlk~~NILl------~~~~~~kl~DfGla~~ 562 (723)
+|+|+.+.|||+ +++..++++||.+|..
T Consensus 247 cHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 247 CHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp ECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred EEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 799999999999 3456799999998764
No 442
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.67 E-value=0.45 Score=51.85 Aligned_cols=58 Identities=7% Similarity=-0.001 Sum_probs=16.7
Q ss_pred hhhccccCcEEEEEEEECC--ceEEE------EEecCCC--hhhHHHHHHHHHHHHhccCCceeeEEEEEe
Q 004935 431 ERVLGNGGFGTVYHGYLDG--TEVAV------KMLSPSS--AQGYKQFQAEVELLMRIHHKNLTTLVGYCD 491 (723)
Q Consensus 431 ~~~lG~G~~g~Vy~~~~~~--~~vav------K~~~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 491 (723)
.+.|| ||.||+|.+.+ .+||| |..+... ......|.+|..++++.+|+|+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 35666 99999999965 48888 7665432 223356889999999999999999888754
No 443
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=64.83 E-value=27 Score=33.21 Aligned_cols=108 Identities=9% Similarity=0.147 Sum_probs=71.1
Q ss_pred cCCceeeEEEEEecCCceEEEEEeCCCC-CHHHHhccCCCCCCCHHHHHHHHHhccc--------cccCCCCCCEEEcCC
Q 004935 479 HHKNLTTLVGYCDEGTNRGLIYEFMANG-NLQALLLGEEADILSWEGRLRIAIEAAK--------VHRDVKSTNILLSGK 549 (723)
Q Consensus 479 ~H~nIv~l~g~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~~l~~~~~l~i~~~~a~--------vH~Dlk~~NILl~~~ 549 (723)
.||++++. ..-...+...+.|+.-+.+ ++.. + ..+....++++++.++. +|--|.|+||+++.+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~r~tf~L~P~NL~f~~~ 115 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDELFFTRD 115 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGSSEECCCSGGGEEECTT
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcCceEEEEecceEEEcCC
Confidence 68888866 3445555544445443321 2222 2 23567788888888776 667899999999999
Q ss_pred CcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhHHHHHHHHHHHHcCCCcccc
Q 004935 550 FQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDVYNFGVVLLEIITSKSVIER 618 (723)
Q Consensus 550 ~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV~SfGvvL~elltg~~p~~~ 618 (723)
+.+++.-.|+-..++ |. ..++..=.-.+=+++..+++++..|+.
T Consensus 116 ~~p~i~~RGik~~l~--------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 116 GLPIAKTRGLQNVVD--------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp SCEEESCCEETTTBS--------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred CCEEEEEccCccCCC--------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999998888654332 21 112222234688999999999988753
No 444
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=61.64 E-value=7.4 Score=41.21 Aligned_cols=58 Identities=10% Similarity=0.145 Sum_probs=36.2
Q ss_pred CceEEEEcCCCccc----ccCc-ccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC
Q 004935 274 PRITSLNLSSSGIA----GDIA-PYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 274 ~~l~~l~ls~n~l~----g~ip-~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n 332 (723)
++|+.|+|.+|.+. ..|+ ..|.+|++|+.|+|.+ +++--=...+.++++|+.+.|..|
T Consensus 271 ~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 271 PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT
T ss_pred CCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc
Confidence 46777777776664 1244 3477777777777773 455222345667777777777554
No 445
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=60.55 E-value=8.4 Score=40.78 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=34.2
Q ss_pred ceEEEEcCCCcccccCcccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccCC
Q 004935 275 RITSLNLSSSGIAGDIAPYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKGT 332 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~n 332 (723)
+|+.+.|.+ .++---+..|.+|++|+.++|++|+++ .||.......+|+.+.|..+
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~ 213 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT 213 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc
Confidence 466677664 454222345777777777777777776 45544444567777776543
No 446
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=38.38 E-value=62 Score=30.82 Aligned_cols=105 Identities=9% Similarity=0.100 Sum_probs=67.6
Q ss_pred cCCceeeEEEEEecCCceEEEEEeCCCC-CHHHHhccCCCCCCCHHHHHHHHHhccc---------cccCCCCCCEEEcC
Q 004935 479 HHKNLTTLVGYCDEGTNRGLIYEFMANG-NLQALLLGEEADILSWEGRLRIAIEAAK---------VHRDVKSTNILLSG 548 (723)
Q Consensus 479 ~H~nIv~l~g~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~~l~~~~~l~i~~~~a~---------vH~Dlk~~NILl~~ 548 (723)
.||.+ + ...-.+.+...+.|+.-+++ ++. .++ .++...+++.++.++. +|--|+|+||++|.
T Consensus 48 ~~~~f-~-~~I~~~eD~~~i~y~~~~~~~~f~-~i~-----~~~~~eKlrll~nl~~L~~~~~~~r~tf~l~P~NL~f~~ 119 (219)
T 4ano_A 48 VDPCI-V-RDIDVSEDEVKVVIKPPSSFLTFA-AIR-----KTTLLSRIRAAIHLVSKVKHHSARRLIFIVCPENLMFNR 119 (219)
T ss_dssp SCSSS-E-EEEEECSSEEEEEEECCTTCEEHH-HHH-----TSCHHHHHHHHHHHHHHHSSCCSSSEECCCCGGGEEECT
T ss_pred cCCCC-C-eEEEEeCCEEEEEEEcCcccCcHH-HHH-----hcCHHHHHHHHHHHHHHHHHhhhCceeEEEeCceEEEeC
Confidence 67877 2 22335566666666655433 333 232 2456667777766654 66689999999999
Q ss_pred CCcEEEEeccCccccCCCCCCceeeecccCCCccccccccccCCCCChhhH-HHHHHHHHHHHcCCCccc
Q 004935 549 KFQAKIADFGLSRTFPVEGSGTHVTTTIAGTPGYLDPEYYISNRLTEKSDV-YNFGVVLLEIITSKSVIE 617 (723)
Q Consensus 549 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DV-~SfGvvL~elltg~~p~~ 617 (723)
++.++|.-.|+-..+ +|.- .+ ..|. -.+=+++..++.++..|+
T Consensus 120 ~~~p~i~hRGi~~~l--------------------pP~e-----~~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 120 ALEPFFLHVGVKESL--------------------PPDE-----WD-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp TCCEEESCCEETTTB--------------------SSCS-----CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CCcEEEEEcCCcccC--------------------CCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999888875433 2221 11 2333 368888999999988764
No 447
>2k3u_B C5AR(P7-28S) peptide, chemotaxis inhibitory protein; chemotaxis inhibitory protein (chips), sulfated tyrosine; HET: TYS; NMR {Staphylococcus aureus subsp}
Probab=35.18 E-value=9.3 Score=21.88 Aligned_cols=9 Identities=44% Similarity=1.106 Sum_probs=7.1
Q ss_pred CCCCCCCCC
Q 004935 2 YGNYDGQGK 10 (723)
Q Consensus 2 ygnyd~~~~ 10 (723)
||.||.|+.
T Consensus 6 yghyddkdt 14 (26)
T 2k3u_B 6 YGHYDDKDT 14 (26)
T ss_dssp CCEECSSSC
T ss_pred ccccCCccc
Confidence 888888764
No 448
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=33.23 E-value=32 Score=35.47 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=29.9
Q ss_pred ceEEEEcCCCcccccCc-ccccCCCCCCeeeCcCCcCcCCCCccCCCCCCCcEEEccC
Q 004935 275 RITSLNLSSSGIAGDIA-PYISTLTSIQILDLSNNNLTGPVPDFLSQLPFLTELNLKG 331 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~iP~~l~~l~~L~~l~l~~ 331 (723)
.|+.+.+..+ ++ .|+ ..|.++++|+.+.|.+|.++--=...+.++.+|+.+.|..
T Consensus 264 ~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 264 ALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred hhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 4555555433 33 233 3456666666666666666522234556666666666643
No 449
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=31.46 E-value=32 Score=35.84 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=27.7
Q ss_pred ceEEEEcCCCcccccCc-ccccCCCCCCeeeCcCCcCcCCCC-ccCCCCCCCcEEEccCC
Q 004935 275 RITSLNLSSSGIAGDIA-PYISTLTSIQILDLSNNNLTGPVP-DFLSQLPFLTELNLKGT 332 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~iP-~~l~~l~~L~~l~l~~n 332 (723)
.|+.+.+..+ ++ .|+ ..|.++++|+.++|.++ ++ .|+ .++.++.+|+.++|..|
T Consensus 298 ~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 298 SLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 4555555443 33 333 33566666666666533 33 232 34555666666665443
No 450
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=30.29 E-value=55 Score=34.02 Aligned_cols=53 Identities=15% Similarity=0.335 Sum_probs=26.2
Q ss_pred ceEEEEcCCCcccccCcc-cccCCCCCCeeeCcCCcCcCCC-CccCCCCCCCcEEEccC
Q 004935 275 RITSLNLSSSGIAGDIAP-YISTLTSIQILDLSNNNLTGPV-PDFLSQLPFLTELNLKG 331 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip~-~~~~l~~L~~L~ls~N~l~g~i-P~~l~~l~~L~~l~l~~ 331 (723)
.|+.+.+. +.++ .|+. .|.++++|+.++|..| ++ .| ...+.++.+|+.+.|..
T Consensus 289 ~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 289 ALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp TCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECT
T ss_pred ccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECc
Confidence 45555554 2333 3332 3556666666666543 33 22 23455566666666543
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=26.50 E-value=8 Score=26.69 Aligned_cols=7 Identities=43% Similarity=0.577 Sum_probs=2.9
Q ss_pred hhhhhcc
Q 004935 397 WSLRRRM 403 (723)
Q Consensus 397 ~~~rrr~ 403 (723)
+++|||+
T Consensus 33 ~~~RRr~ 39 (44)
T 2ks1_B 33 LFMRRRH 39 (44)
T ss_dssp HHHHTTT
T ss_pred HHhhhhH
Confidence 3444443
No 452
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=25.26 E-value=70 Score=32.83 Aligned_cols=53 Identities=11% Similarity=0.201 Sum_probs=25.8
Q ss_pred ceEEEEcCCCcccccCc-ccccCCCCCCeeeCcCCcCcCCCC-ccCCCCCCCcEEEcc
Q 004935 275 RITSLNLSSSGIAGDIA-PYISTLTSIQILDLSNNNLTGPVP-DFLSQLPFLTELNLK 330 (723)
Q Consensus 275 ~l~~l~ls~n~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~iP-~~l~~l~~L~~l~l~ 330 (723)
+|+.+.|.++.++ .|+ ..|.++++|+.+.|.++ ++ .|+ .++.++++|+.+.|.
T Consensus 287 ~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 287 NLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred ccccccccccccc-eehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 4555555555554 233 33555555555555433 32 232 234455555555543
No 453
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=25.25 E-value=79 Score=32.76 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=18.2
Q ss_pred ccCCCCCCeeeCcCCcCcCCCC-ccCCCCCCCcEEEcc
Q 004935 294 ISTLTSIQILDLSNNNLTGPVP-DFLSQLPFLTELNLK 330 (723)
Q Consensus 294 ~~~l~~L~~L~ls~N~l~g~iP-~~l~~l~~L~~l~l~ 330 (723)
+..+++|+.+.+.+| ++ .|+ ..+.++.+|+.++|.
T Consensus 293 F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp TTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCC
T ss_pred ccccccccccccccc-cc-eechhhhcCCCCCCEEEeC
Confidence 555566666665543 33 232 345555666666654
No 454
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=22.67 E-value=26 Score=20.04 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=13.6
Q ss_pred CCccCCCCCCCceEec
Q 004935 96 ETFRYPDDIYDRIWLP 111 (723)
Q Consensus 96 ~~~rypdD~~dR~W~~ 111 (723)
...|-|+|.|.-+|..
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 4679999999999974
Done!