BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004937
(723 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 1 MPDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSL 60
MP L LD LQ+KD ++AEPV+ E+PDY + I PMDF+T+R+KL + Y +L
Sbjct: 592 MPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTL 651
Query: 61 DQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKELKPEKELN 120
++FE D LI TN M+YNA DT++H+ A +++L R E + PE+ +
Sbjct: 652 EEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYD--PERGTH 709
Query: 121 LEKELRLEKDLKSEPKTKSSILVKKQTKKHFSRTIQ 156
L + +LE + + +IL+ + + H S +Q
Sbjct: 710 LPESPKLEDFYRFSWEDVDNILI-PENRAHLSPEVQ 744
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 7 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
L +LD+LQ KD ++A+PV +E+PDY D I++PMDF T+RK+L Y +L +FE D
Sbjct: 571 LRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEED 630
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQE 93
LI N M+YNA DTV+++ A +++
Sbjct: 631 FDLIIDNCMKYNARDTVFYRAAVRLRD 657
>sp|Q3UQU0|BRD9_MOUSE Bromodomain-containing protein 9 OS=Mus musculus GN=Brd9 PE=2 SV=1
Length = 596
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P ++ LE L +LQ+KD +G +A PV P Y +I++PMDF T++ K+ Y S+
Sbjct: 140 PIQRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 199
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAI 91
+F++D L+C NAM YN PDTVY+K A+ I
Sbjct: 200 EFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
>sp|Q6NVM8|BRD9_XENTR Bromodomain-containing protein 9 OS=Xenopus tropicalis GN=brd9 PE=2
SV=1
Length = 596
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P ++ LE L +LQ+KD G +A PV + P Y +I+NPMDF+T+++K++ Y S+
Sbjct: 152 PLQQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQNEYKSVT 211
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFH 100
+F++D L+C NAM YN P+TVY+K LAKK H
Sbjct: 212 EFKADFKLMCDNAMTYNRPETVYYK-------LAKKLLH 243
>sp|Q6GLP7|BRD9_XENLA Bromodomain-containing protein 9 OS=Xenopus laevis GN=brd9 PE=2
SV=1
Length = 527
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P ++ LE L +LQ+KD G +A PV + P Y +I+NPMDF+T+++K++ Y S+
Sbjct: 82 PLQQLLEYFLRQLQRKDPNGFFAFPVTDQIAPGYFMIIKNPMDFSTMKEKISQDEYKSVT 141
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFH 100
+F++D L+C NAM YN P+TVY+K LAKK H
Sbjct: 142 EFKADFKLMCDNAMTYNRPETVYYK-------LAKKLLH 173
>sp|Q9H8M2|BRD9_HUMAN Bromodomain-containing protein 9 OS=Homo sapiens GN=BRD9 PE=1 SV=2
Length = 597
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P ++ LE L +LQ+KD +G +A PV P Y +I++PMDF T++ K+ Y S+
Sbjct: 140 PIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVT 199
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAI 91
+F++D L+C NAM YN PDTVY+K A+ I
Sbjct: 200 EFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
>sp|Q7ZUF2|BRD9_DANRE Bromodomain-containing protein 9 OS=Danio rerio GN=brd9 PE=2 SV=1
Length = 631
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 60/90 (66%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P ++ LE L LQ+KD +G +A PV P Y +I++PMDF+T++ K+A Y ++
Sbjct: 170 PHQQLLEHFLRLLQRKDAHGFFAFPVTDAIAPGYSMIIKHPMDFSTMKDKIAANEYKTIT 229
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAI 91
+F++D L+C NAM YN P+TVY+K A+ +
Sbjct: 230 EFKADFKLMCDNAMVYNRPETVYYKAAKKL 259
>sp|Q5ZKG2|BRD7_CHICK Bromodomain-containing protein 7 OS=Gallus gallus GN=BRD7 PE=2 SV=1
Length = 651
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P +++L ++ +LQ+KD ++ PV P Y +I+NPMDF+T+++K+ N Y S++
Sbjct: 135 PLQEALNQLMRQLQRKDPSSFFSFPVTDFIAPGYSMIIKNPMDFSTMKEKIKNNGYQSIE 194
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQAR-----AIQELAKKKFHRLRAGIE 107
+ + + L+CTNAM YN PDT+Y+K A+ ++ L++++ L+ IE
Sbjct: 195 ELKDNFKLMCTNAMTYNKPDTIYYKAAKKLLHSGMKILSQERIQSLKQSIE 245
>sp|O88665|BRD7_MOUSE Bromodomain-containing protein 7 OS=Mus musculus GN=Brd7 PE=1 SV=1
Length = 651
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P +++L ++ +LQ+KD ++ PV P Y +I++PMDF+T+++K+ N Y S++
Sbjct: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQAR-----AIQELAKKKFHRLRAGIE 107
+ + + L+CTNAM YN P+T+Y+K A+ ++ L++++ L+ I+
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|Q5R8B0|BRD7_PONAB Bromodomain-containing protein 7 OS=Pongo abelii GN=BRD7 PE=2 SV=1
Length = 651
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P +++L ++ +LQ+KD ++ PV P Y +I++PMDF+T+++K+ N Y S++
Sbjct: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQAR-----AIQELAKKKFHRLRAGIE 107
+ + + L+CTNAM YN P+T+Y+K A+ ++ L++++ L+ I+
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|Q9NPI1|BRD7_HUMAN Bromodomain-containing protein 7 OS=Homo sapiens GN=BRD7 PE=1 SV=1
Length = 651
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P +++L ++ +LQ+KD ++ PV P Y +I++PMDF+T+++K+ N Y S++
Sbjct: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQAR-----AIQELAKKKFHRLRAGIE 107
+ + + L+CTNAM YN P+T+Y+K A+ ++ L++++ L+ I+
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 45/236 (19%)
Query: 7 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
L L++LQ+KDT +++EPV E+PDY D I+ PMDF T+++ L Y + D FE D
Sbjct: 637 LRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEED 696
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIER------------------ 108
LI +N ++YNA DT++++ A ++E + R E+
Sbjct: 697 FNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMGIDFETGMHIPHSLAGD 756
Query: 109 ---------SEKE----LKPEKELNLEKELRL--------EKDLKSEPKTKSSILVKKQ- 146
+E+E L+ +K L +E++L+L +S +++ + ++KK+
Sbjct: 757 EATHHTEDAAEEERLVLLENQKHLPVEEQLKLLLERLDEVNASKQSVGRSRRAKMIKKEM 816
Query: 147 TKKHFSRTIQEPVGSDFSSGATLATTGDIQNGSVATQAGGCERPTNTDAIVDGNSS 202
T Q G D G GS+ C++ TD+ + +SS
Sbjct: 817 TALRRKLAHQRETGRDGPE-----RHGPSSRGSLTPHPAACDKDGQTDSAAEESSS 867
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 23 YAEPVDPE--ELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVDP + PDY DVI+ PMD +T++ KL YS+L++FESD+ L+ N YN P
Sbjct: 279 FYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPP 338
Query: 81 DTVYHKQARAIQELAKKKFH 100
T H R ++ + K+K+
Sbjct: 339 GTPVHVMGRQLENVFKEKWE 358
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDP--EELPDYHDVIENPMDFTTVRKKLANGSYSS 59
P +K I+ +L++ + PVDP + +PDY +++NPMD T+ KKL + YS
Sbjct: 88 PQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSV 147
Query: 60 LDQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRL 102
+F D+ L+ +N YN ++ +A+QE+ +++ +L
Sbjct: 148 PQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
PD E+IL +L+ + + EPV+P +P Y +I+NPMDF+T+R KL NG+YS +
Sbjct: 1589 PDLTFCEIILMELESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFSTMRHKLLNGNYSRCE 1648
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLR 103
+F D LI +N +N ++ K L KKF+ R
Sbjct: 1649 EFAEDAELIFSNCQLFNEDESDVGKAG-----LILKKFYDAR 1685
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 5 KSLELILDKLQKKDTYGV---YAEPVDPEELP--DYHDVIENPMDFTTVRKKLANGSYSS 59
KS IL +L K G + +PVD E L DYHD+I+ PMD TV++K+ N Y S
Sbjct: 482 KSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKS 541
Query: 60 LDQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRL 102
+F +DV LI TN +YN PD R +Q++ + ++ +
Sbjct: 542 APEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD ++L PDYH +I+ PMD T++K+L N Y S + D + N YN P
Sbjct: 59 FQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKP 118
Query: 81 DTVYHKQARAIQELAKKKFHRLRAGIERSEKELKP 115
A+ ++++ +K + + E EL+P
Sbjct: 119 GEDVVVMAQTLEKVFLQKIESM----PKEELELEP 149
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 23 YAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAPDT 82
++ PV+ EE+ DY+DVI+ PMD +T+ KL N Y S DQF D LI N YNA T
Sbjct: 367 FSTPVNKEEVGDYYDVIKEPMDLSTMESKLENDKYDSFDQFLYDARLIFNNCRSYNADST 426
Query: 83 VYHKQARAIQELAKKK 98
Y K A +++ K
Sbjct: 427 TYFKNATKLEKFMNNK 442
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 3 DKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
D E+IL +++ D + EPV+P + Y VI+NPMDF+T+R++L G Y+S ++
Sbjct: 1782 DLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRVIKNPMDFSTMRERLLRGGYTSSEE 1841
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAG 105
F +D L+ N +N D+ K ++ + ++ G
Sbjct: 1842 FAADALLVFDNCQTFNEDDSEVGKAGHVMRRFFESRWEEFYQG 1884
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 7 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
LE++ ++Q + + +PV E++PDY++VIE+PMD +T+ +L N Y S+++F D
Sbjct: 352 LEMLFTEMQNHPSSWPFMQPVSKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRD 411
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKF 99
I N YN +T Y+K A +++ +KK
Sbjct: 412 AKYIFDNCRSYNDSNTTYYKNADRLEKFFQKKL 444
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 10 ILDKLQKKDTYGVYAEPVDP--EELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDV 67
+++ + KK T + PVDP E +PDY DVI++PMD T++ KL N YS++ F +DV
Sbjct: 528 LINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADV 587
Query: 68 FLICTNAMQYNAPDTVYHKQARAIQELAKKKF 99
L+ NA+ YNA + K A+ + +KF
Sbjct: 588 RLMFENALTYNADSSPVWKHAKTLLNAFDQKF 619
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%)
Query: 3 DKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
D E+IL +++ D + EPV+P + Y +I+NPMDF+T+R++L G Y+S ++
Sbjct: 1798 DLTFCEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEE 1857
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAG 105
F +D L+ N +N D+ K ++ + ++ G
Sbjct: 1858 FAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQG 1900
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 22 VYAEPVDP--EELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNA 79
++ EPVDP E+PDY +VI+ PMD TV+ KL YS+ D+F +DV L NAM YN
Sbjct: 88 LFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNP 147
Query: 80 PDTVYHKQARAIQE--------LAKKKFHRL-----RAGIER 108
H A+ I E L KKK RL R G +R
Sbjct: 148 LWNEVHTIAKEINEIFEVRWESLMKKKVLRLSWNEVREGYKR 189
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P +++ IL +LQ + PV+ EE+PDY++ I+ PMD +T+ KL N Y ++
Sbjct: 438 PHYAAIQNILVELQNHAAAWPFLRPVNKEEVPDYYEFIKEPMDLSTMELKLENNKYEKME 497
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRL 102
+F D L+C N YN +T Y+K A +++ K +
Sbjct: 498 EFIYDARLVCNNCRLYNGENTSYYKYANRLEKFFNNKVKEI 538
>sp|P21675|TAF1_HUMAN Transcription initiation factor TFIID subunit 1 OS=Homo sapiens
GN=TAF1 PE=1 SV=2
Length = 1872
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 3 DKKSLELILDKLQKKDTYGV-----YAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSY 57
D+ + ILD + + V + PV+ + +PDY+ VI NPMD T+RK ++ Y
Sbjct: 1503 DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKY 1562
Query: 58 SSLDQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
S + F DV LI N+++YN P++ Y K A+ I + + + + EK++
Sbjct: 1563 QSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDI 1618
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 7 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
LE I++ ++ + PV+ + + DY+ +I PMD T+R+ + Y S ++F
Sbjct: 1389 LESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREH 1448
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKELKP 115
+ LI N+ YN P + ++++ +L +K + R EK + P
Sbjct: 1449 LELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINP 1497
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPE--ELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD E EL DYHD+I++PMD +TV++K+ Y F +DV L+ +N +YN P
Sbjct: 334 FYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPP 393
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + +F ++
Sbjct: 394 DHEVVAMARKLQDVFEMRFAKM 415
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 9 LILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
+++ L K + +PVD +L PDYH +I+NPMD T++K+L N Y S + D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKELKP 115
+ TN YN P A+A++++ F + A + + E EL P
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKI----FLQKVAQMPQEEVELLP 149
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPE--ELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD E EL DYHD+I++PMD +TV++K+ + Y F +D+ L+ +N +YN P
Sbjct: 333 FYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPP 392
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + +F ++
Sbjct: 393 DHEVVAMARKLQDVFEMRFAKM 414
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 9 LILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
+++ L K + +PVD +L PDYH +I+NPMD T++K+L N Y S + D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKELKP 115
+ TN YN P A+A++++ F + A + + E EL P
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKI----FLQKVAQMPQEEVELLP 148
>sp|P54816|TBP7_CAEEL Tat-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3
Length = 1291
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 11 LDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLI 70
L +L + + + EPVDP+E DY+++IE P+ + +KL N Y+ D+F +D+ LI
Sbjct: 927 LTRLMRDRRFVEFVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILI 986
Query: 71 CTNAMQYNAPDTVYHKQARAIQELA 95
TNA++YN T K + I+++A
Sbjct: 987 QTNALEYNPSTT---KDGKLIRQMA 1008
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 3 DKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
D + L+ ++ ++Q + + EPVDP+E PDY+ VI+ PMD + KL + +Y+ L +
Sbjct: 2561 DVEELKNLIKQMQLHKSAWPFMEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSE 2620
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGI 106
F D+ I N YN ++ ++K A A++ +K R +
Sbjct: 2621 FIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRENV 2664
>sp|Q80UV9|TAF1_MOUSE Transcription initiation factor TFIID subunit 1 OS=Mus musculus
GN=Taf1 PE=2 SV=2
Length = 1891
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 3 DKKSLELILDKLQKKDTYGV-----YAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSY 57
D+ + ILD + + V + PV+ + +PDY+ VI +PMD T+RK ++ Y
Sbjct: 1524 DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKY 1583
Query: 58 SSLDQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
S + F DV LI N+++YN P++ Y K A+ I + + + + EK++
Sbjct: 1584 QSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCHQTLTEYDEHLTQLEKDI 1639
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 7 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
LE I++ ++ + PV+ + + DY+ +I PMD T+R+ + Y S ++F
Sbjct: 1410 LESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREH 1469
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKELKP 115
+ LI N+ YN P + ++++ +L +K + R EK + P
Sbjct: 1470 LELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINP 1518
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 5 KSLELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
K E +L++L + + PVDP L PDY +VI++PMD T+R +L G YSS
Sbjct: 163 KECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLD 222
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAI 91
F +DV L +N++ YN P +H A+ I
Sbjct: 223 FAADVRLTFSNSIAYNPPGNQFHTMAQGI 251
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 2 PDKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLD 61
P +++ IL +LQ + +PV+ EE+PDY+D I+ PMD +T+ KL + Y ++
Sbjct: 331 PHDAAIQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKME 390
Query: 62 QFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKK 98
F D L+ N YN +T Y+K A +++ K
Sbjct: 391 DFIYDARLVFNNCRMYNGENTSYYKYANRLEKFFNNK 427
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 5 KSLELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
K L + +KL K + + PVD + L PDYH++I+ PMD TV KKL G Y + Q
Sbjct: 871 KFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQ 930
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQEL 94
F D++L+ NA YN ++ +K + E+
Sbjct: 931 FCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEM 962
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 23 YAEPVDPEELPDYHDVIENPMDFTTVRKKL-ANGSYSSLDQFESDVFLICTNAMQYNAPD 81
+ EPVD ++PDY+D+I++P+D T+ K++ + Y +L+ F +D+ + +NA YN+PD
Sbjct: 423 FKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMKRMFSNAKTYNSPD 482
Query: 82 TVYHKQARAIQELAKKK 98
T+Y+K A ++ K
Sbjct: 483 TIYYKCASRLESFFSNK 499
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 23 YAEPVDPEELPDYHDVIENPMDFTTVRKKL-ANGSYSSLDQFESDVFLICTNAMQYNAPD 81
+ EPVD ++PDY+D+I++P+D + K++ + Y +LD F +D + N YN+PD
Sbjct: 480 FKEPVDSRDVPDYYDIIKDPIDLKVIAKRVESEQYYVTLDMFVADARRMFNNCRTYNSPD 539
Query: 82 TVYHKQARAIQELAKKKFH-RLRAGIERSEK 111
T+Y+K A ++ FH +++AG++ K
Sbjct: 540 TIYYKCATRLE----THFHSKVQAGLQSGAK 566
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 4 KKSLELILDKLQKKDTYGV-YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSL 60
+++L L+ L ++D + + +PVDP+ L PDY D+++NPMD +T+++KL G Y
Sbjct: 1092 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1151
Query: 61 DQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKF 99
Q+ DV+L+ NA YN + +K + E+ +++
Sbjct: 1152 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEI 1190
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD L DYHD+I++PMD +TV++K+ N Y +F +DV L+ +N +YN P
Sbjct: 371 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 430
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + ++ ++
Sbjct: 431 DHDVVAMARKLQDVFEFRYAKM 452
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 8 ELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFES 65
++++ L K + +PVD +L PDYH +I+ PMD T++++L N Y + +
Sbjct: 83 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 142
Query: 66 DVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
D + TN YN P A+ ++++ +K A + + E+EL
Sbjct: 143 DFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV----ASMPQEEQEL 186
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 4 KKSLELILDKLQKKDTYGV-YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSL 60
+++L L+ L ++D + + +PVDP+ L PDY D+++NPMD +T+++KL G Y
Sbjct: 1091 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1150
Query: 61 DQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKF 99
Q+ DV+L+ NA YN + +K + E+ +++
Sbjct: 1151 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEI 1189
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD L DYHD+I++PMD +TV++K+ N Y +F +DV L+ +N +YN P
Sbjct: 371 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 430
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + ++ ++
Sbjct: 431 DHDVVAMARKLQDVFEFRYAKM 452
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 8 ELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFES 65
++++ L K + +PVD +L PDYH +I+ PMD T++++L N Y + +
Sbjct: 83 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 142
Query: 66 DVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
D + TN YN P A+ ++++ +K A + + E+EL
Sbjct: 143 DFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV----ASMPQEEQEL 186
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 4 KKSLELILDKLQKKDTYGV-YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSL 60
+++L L+ L ++D + + +PVDP+ L PDY D+++NPMD +T+++KL G Y
Sbjct: 1092 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEP 1151
Query: 61 DQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKF 99
Q+ DV+L+ NA YN + +K + E+ +++
Sbjct: 1152 WQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEI 1190
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD L DYHD+I++PMD +TV++K+ N Y +F +DV L+ +N +YN P
Sbjct: 372 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 431
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + ++ ++
Sbjct: 432 DHDVVAMARKLQDVFEFRYAKM 453
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 8 ELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFES 65
++++ L K + +PVD +L PDYH +I+ PMD T++++L N Y + +
Sbjct: 84 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 143
Query: 66 DVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
D + TN YN P A+ ++++ +K A + + E+EL
Sbjct: 144 DFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV----ASMPQEEQEL 187
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD L DYHD+I++PMD +TV++K+ N Y +F +DV L+ +N +YN P
Sbjct: 372 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 431
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + ++ ++
Sbjct: 432 DHDVVAMARKLQDVFEFRYAKM 453
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 8 ELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFES 65
++++ L K + +PVD +L PDYH +I+ PMD T++++L N Y + +
Sbjct: 84 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 143
Query: 66 DVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
D + TN YN P A+ ++++ +K A + + E+EL
Sbjct: 144 DFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV----ASMPQEEQEL 187
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVD L DYHD+I++PMD +TV++K+ N Y +F +DV L+ +N +YN P
Sbjct: 372 FYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPP 431
Query: 81 DTVYHKQARAIQELAKKKFHRL 102
D AR +Q++ + ++ ++
Sbjct: 432 DHDVVAMARKLQDVFEFRYAKM 453
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 8 ELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFES 65
++++ L K + +PVD +L PDYH +I+ PMD T++++L N Y + +
Sbjct: 84 KVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQ 143
Query: 66 DVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
D + TN YN P A+ ++++ +K A + + E+EL
Sbjct: 144 DFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKV----ASMPQEEQEL 187
>sp|Q8IZX4|TAF1L_HUMAN Transcription initiation factor TFIID subunit 1-like OS=Homo sapiens
GN=TAF1L PE=1 SV=1
Length = 1826
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 3 DKKSLELILDKLQKKDTYGV-----YAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSY 57
D+ + ILD + + V + PV+ + +PDY+ +I NP+D T+RK ++ Y
Sbjct: 1522 DQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKY 1581
Query: 58 SSLDQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKEL 113
S + F DV LI N+++YN P++ Y K A+ I + + + + EK++
Sbjct: 1582 QSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQTITEYDEHLTQLEKDI 1637
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 7 LELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESD 66
LE I++ ++ + PV+ + + DY+ +I PMD T+R+ + Y S ++F
Sbjct: 1408 LESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREH 1467
Query: 67 VFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRAGIERSEKELKP 115
+ LI N+ YN P + ++++ +L +K + R EK + P
Sbjct: 1468 LELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINP 1516
>sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2
Length = 813
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 5 KSLELILDKLQKKDTYGVYAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
K + +L KL V+ PVD +L PDY I++PMD TV+K LA+G YSS +
Sbjct: 178 KQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHE 237
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLR 103
F +DV L TNAM YN P H + +L + ++ ++
Sbjct: 238 FAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIK 278
>sp|Q8LRK9|TAF1A_ARATH Transcription initiation factor TFIID subunit 1-A OS=Arabidopsis
thaliana GN=HAF1 PE=2 SV=1
Length = 1919
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 7 LELILDKLQ-KKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFES 65
LE I+D L+ K++ ++ +PV +E PDY D++ENPMD +T+R K+ Y + +QF
Sbjct: 1807 LERIVDTLRLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQFRH 1866
Query: 66 DVFLICTNAMQYN 78
DV+ I NA YN
Sbjct: 1867 DVWQIKYNAHLYN 1879
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 5 KSLELILDKLQKK----DTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSL 60
+ L L L + K+ + ++++PVD EE+ DY +VI+ PMD +TV K+ +Y +
Sbjct: 961 RELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLEVIKEPMDLSTVITKIDKHNYLTA 1020
Query: 61 DQFESDVFLICTNAMQYNAPD 81
F D+ LIC+NA++YN PD
Sbjct: 1021 KDFLKDIDLICSNALEYN-PD 1040
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 5 KSLELILDKLQKKDTYGVYAEPVDP--EELPDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
K L++++ K + D + +PVDP LP+Y DV++NPMD T+ L N Y ++DQ
Sbjct: 328 KILKVLMSK-KNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQ 386
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRL 102
F D+ L+ N Q+N H + ++EL FH L
Sbjct: 387 FVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELF--NFHWL 424
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 23 YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNAP 80
+ +PVDP L P Y + ++ PMD + + KL Y S++Q SD + N + +N P
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 81 DTVYHKQARAIQELAKKKF 99
++ A+ IQ+ +KK
Sbjct: 218 ESSISSMAKRIQKYFEKKL 236
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 3 DKKSLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQ 62
D + L+ +L LQ + EPVDP + PDY+ VI+ PMD T+ +++ Y L +
Sbjct: 2932 DYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTE 2991
Query: 63 FESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKFHRLRA 104
F +D+ I N YN D+ +++ A ++ +K +A
Sbjct: 2992 FVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGFKA 3033
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 20 YGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNA 79
+ V+ +PVDP+E+PDY VI+ PMD ++V K+ Y ++ + D+ LIC+NA++YN
Sbjct: 1006 FRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYN- 1064
Query: 80 PD 81
PD
Sbjct: 1065 PD 1066
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 20 YGVYAEPVDPEELPDYHDVIENPMDFTTVRKKLANGSYSSLDQFESDVFLICTNAMQYNA 79
+ V+ +PVDP+E+PDY VI+ PMD ++V K+ Y ++ + D+ LIC+NA++YN
Sbjct: 655 FRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNALEYN- 713
Query: 80 PD 81
PD
Sbjct: 714 PD 715
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 4 KKSLELILDKLQKKDTYGV-YAEPVDPEEL--PDYHDVIENPMDFTTVRKKLANGSYSSL 60
+++L L+ L ++D + + +PVDP+ L PDY D++++PMD +T+++KL G Y
Sbjct: 1055 RQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEP 1114
Query: 61 DQFESDVFLICTNAMQYNAPDTVYHKQARAIQELAKKKF 99
Q+ D++L+ NA YN + +K + E+ +++
Sbjct: 1115 WQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEI 1153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 274,769,022
Number of Sequences: 539616
Number of extensions: 12105820
Number of successful extensions: 35301
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 34526
Number of HSP's gapped (non-prelim): 877
length of query: 723
length of database: 191,569,459
effective HSP length: 125
effective length of query: 598
effective length of database: 124,117,459
effective search space: 74222240482
effective search space used: 74222240482
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)