BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004938
(722 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/729 (56%), Positives = 562/729 (77%), Gaps = 24/729 (3%)
Query: 11 LTLP---TSTA-------ISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLP 60
+TLP STA +S C SL H+KQ HA IL+ + +H NS L
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILR-TVINHKLNSFLFN------LSV 53
Query: 61 TTTPSSLYYALSIFSQIPAPP-SRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFS 119
+++ +L YAL++FS IP+PP S V N F+R +S S P+ + + ++ + G +D+FS
Sbjct: 54 SSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFS 113
Query: 120 FPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMS 179
F PILKA+++ L EGM++HG+ K+ DPFV+TG + MY +CG+I AR +FD+MS
Sbjct: 114 FLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS 173
Query: 180 YRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEA 239
+RD+V W+ MI+ Y + GL DE LFEEMK SNV PDEM+L I+SAC R GN+ Y A
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 233
Query: 240 VHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQ 299
++EF+I+N+V +D HL + L+TMYA GCMDMA+ F K+ ++NL VSTAMVSGYS+ G+
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR 293
Query: 300 VEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISA 359
++DA++IFDQ +KDL+CW+ MIS Y E+++PQEAL++F EM G+KPD V+M SVISA
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 360 CAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISW 419
CA+LG+LD+A+ +H I N +L +NNA+I+MYAKCG L++ R+VFE+M RRNV+SW
Sbjct: 354 CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSW 413
Query: 420 TSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTN 479
+SMINA ++HG+A +AL F +MK E+++PN VTF+GVLY CSH+GLV+EG++IFASMT+
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Query: 480 EYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAE 539
EYNI PK EHYGCMVDLFGRANLLREALE++E+MP A NVVIWGSLM+ACR+HGE+EL +
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGK 533
Query: 540 FAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEV 599
FAAK++L+L+PDHDGALVL+SNIYA+++RW+DV +R+ M+E+ + KE+ SRI+ N +
Sbjct: 534 FAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKS 593
Query: 600 YEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLA 659
+EFL D+ HKQ+++IY KL+EV+S+LK AGYVPD S LVD+E+EEK++++LWHSEKLA
Sbjct: 594 HEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLA 653
Query: 660 LCYGLIS----SKKDSC--IRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKD 713
LC+GL++ +KDSC IRIVKNLRVCEDCH F KLVSKVY REI++RDRTRFH YK+
Sbjct: 654 LCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKN 713
Query: 714 GVCSCKDYW 722
G+CSC+DYW
Sbjct: 714 GLCSCRDYW 722
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 296/729 (40%), Positives = 454/729 (62%), Gaps = 16/729 (2%)
Query: 3 TLSQPTKPLTLPTSTA----ISSCSSLTHMKQTHAQILKLS--HSHHSQNSLLLKLLLTS 56
S P +P T + I C SL +KQTH +++ +S + L L+S
Sbjct: 17 NFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76
Query: 57 FSLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTI- 115
F+ SL YA +F +IP P S N IRA + P ++ FL M++E
Sbjct: 77 FA-------SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 129
Query: 116 DRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMF 175
++++FP ++KA A L G +HG+ K GSD FV L+ Y +CG + A +F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 176 DKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLS 235
+ +D+V W+ MI+G+ Q G D+ L LF++M+ +V+ + + +LSAC++ NL
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 236 YGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYS 295
+G V +I +N V ++ L + ++ MY CG ++ AK LFD + K+ V T M+ GY+
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 296 RAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVC-GMKPDKVTML 354
+ E AR + + M +KD++ W+A+IS Y +N P EAL +F+E+Q+ MK +++T++
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 355 SVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRR 414
S +SACA +G L+ + IH YI K+ + V +A+I MY+KCG LE +REVF + +R
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 415 NVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIF 474
+V W++MI A+HG A+ F KM++ ++ PNGVTF V ACSH GLVDE +F
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489
Query: 475 ASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGE 534
M + Y I P+ +HY C+VD+ GR+ L +A++ +E MP P+ +WG+L+ AC++H
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Query: 535 IELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIE 594
+ LAE A +LL+L+P +DGA VLLSNIYAK +W++V ELRK M+ G+ KE CS IE
Sbjct: 550 LNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
Query: 595 MNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVIL-W 653
++ ++EFL+ D +H ++++Y KL+EV+ +LK GY P+I L +E+EE +E L
Sbjct: 610 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNL 669
Query: 654 HSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKD 713
HSEKLA+CYGLIS++ IR++KNLRVC DCH+ KL+S++Y REI++RDR RFHH+++
Sbjct: 670 HSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 729
Query: 714 GVCSCKDYW 722
G CSC D+W
Sbjct: 730 GQCSCNDFW 738
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 286/742 (38%), Positives = 437/742 (58%), Gaps = 68/742 (9%)
Query: 14 PTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSI 73
P+ + + +C +L ++ HAQ++K+ H+ N L KL+ F + + L YA+S+
Sbjct: 35 PSLSLLHNCKTLQSLRIIHAQMIKIGL--HNTNYALSKLI--EFCILSPHFEGLPYAISV 90
Query: 74 FSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGL 133
F I P + N R + S P ALK+++ M++ GL + ++FP +LK+ A+++
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 134 LEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVP-------- 185
EG Q+HG KLG D +V T L+ MY G++ DA +FDK +RD+V
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 186 -----------------------WSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLS 222
W+ MI GY + G + E L LF++M +NV PDE +
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 223 KILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLK 282
++SAC+++G++ G VH +I D+
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFG-------------------------------S 299
Query: 283 NLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQ 342
NL + A++ YS+ G++E A +F+++ KD+I W+ +I GY N +EAL LF EM
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 343 VCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFG--GDLRVNNAIIDMYAKCGS 400
G P+ VTMLS++ ACAHLG +D + IH+YIDK G + ++IDMYAKCG
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 401 LESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYA 460
+E+A +VF + +++ SW +MI FA+HG A + F++M+ I P+ +TF+G+L A
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 461 CSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVV 520
CSH+G++D GR IF +MT +Y + PK EHYGCM+DL G + L +EA E++ M P+ V
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 521 IWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMK 580
IW SL+ AC++HG +EL E A+ L++++P++ G+ VLLSNIYA RW +V + R +
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 581 ERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALV 640
++G+ K CS IE+++ V+EF+ D+ H + +IY L E+ L+ AG+VPD L
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659
Query: 641 DLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREI 700
++E+E K + HSEKLA+ +GLIS+K + + IVKNLRVC +CH KL+SK+Y REI
Sbjct: 660 EMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 719
Query: 701 VIRDRTRFHHYKDGVCSCKDYW 722
+ RDRTRFHH++DGVCSC DYW
Sbjct: 720 IARDRTRFHHFRDGVCSCNDYW 741
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/709 (37%), Positives = 420/709 (59%), Gaps = 41/709 (5%)
Query: 16 STAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFS 75
++ I S + +KQ HA++L L L+ KL+ S S T +A +F
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQF--SGFLITKLIHASSSFGDIT-----FARQVFD 77
Query: 76 QIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLE 135
+P P N IR S ++ + AL ++ M ++ D F+FP +LKA + L
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 136 GMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSY--RDIVPWSVMIDGY 193
G VH +LGF +D FVQ GL+ +Y C ++ AR +F+ + R IV W+ ++ Y
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 194 FQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDA 253
QNG E L +F +M+ +V+PD + L +L+A + +L G ++H ++ + ++
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 254 HLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEK 313
L +L TMYA CG QV A+++FD+M
Sbjct: 258 DLLISLNTMYAKCG-------------------------------QVATAKILFDKMKSP 286
Query: 314 DLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIH 373
+LI W+AMISGYA+N + +EA+ +F+EM ++PD +++ S ISACA +G L+QA+ ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 374 LYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDAR 433
Y+ ++ + D+ +++A+IDM+AKCGS+E AR VF+R R+V+ W++MI + +HG AR
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
Query: 434 NALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCM 493
A+ + M+ + PN VTF+G+L AC+H+G+V EG F M ++ I P+ +HY C+
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACV 465
Query: 494 VDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHD 553
+DL GRA L +A E+++ MP P V +WG+L++AC+ H +EL E+AA+QL +DP +
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNT 525
Query: 554 GALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTD 613
G V LSN+YA + W V E+R MKE+G+ K+ CS +E+ + F D+SH + +
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Query: 614 QIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCI 673
+I ++ + S LK G+V + ++L DL DEE E + HSE++A+ YGLIS+ + + +
Sbjct: 586 EIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPL 645
Query: 674 RIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
RI KNLR C +CH KL+SK+ REIV+RD RFHH+KDGVCSC DYW
Sbjct: 646 RITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 203/431 (47%), Gaps = 47/431 (10%)
Query: 110 NEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKIL 169
N G+ D F I A +A+ Q+H LG F+ T L+ + G I
Sbjct: 15 NSGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 170 DARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACS 229
AR +FD + I PW+ +I GY +N F + L ++ M+++ V PD +L ACS
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 230 RAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLL--KNLVVS 287
+L G VH + D +Q+ LI +YA C + A+ +F+ + L + +V
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 288 TAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMK 347
TA+VS Y++ G+ +A IF QM + D+ K
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDV-------------------------------K 219
Query: 348 PDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREV 407
PD V ++SV++A L L Q + IH + K + + ++ MYAKCG + +A+ +
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 279
Query: 408 FERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLV 467
F++M+ N+I W +MI+ +A +G AR A+ F++M ++ + P+ ++ + AC+ G +
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 468 DEGREIFASMTNEYNIPPKYEH----YGCMVDLFGRANLLREALELVETMPFAPNVVIWG 523
++ R ++ EY Y ++D+F + + E LV +VV+W
Sbjct: 340 EQARSMY-----EYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWS 393
Query: 524 SLMAACRVHGE 534
+++ +HG
Sbjct: 394 AMIVGYGLHGR 404
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/723 (36%), Positives = 412/723 (56%), Gaps = 39/723 (5%)
Query: 1 MSTLSQPTKPLTLP-TSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSL 59
MS ++ P+ + T IS ++ H+KQ H ++ H HH ++ L+ LLL
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLIN-HHLHH--DTFLVNLLLKRTLF 57
Query: 60 PTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFS 119
T Y+ +FS P + N I +H L +FL + GL + F+
Sbjct: 58 FRQTK----YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFT 113
Query: 120 FPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMS 179
FP +LKA RA G+ +H L K GF D T L+ +Y G++ DA +FD++
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 180 YRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEA 239
R +V W+ + GY +G E ++LF++M V+PD + ++LSAC G+L GE
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 240 VHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQ 299
+ +++ + M+M K F V T +V+ Y++ G+
Sbjct: 234 IVKYMEE----------------------MEMQKNSF---------VRTTLVNLYAKCGK 262
Query: 300 VEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISA 359
+E AR +FD MVEKD++ WS MI GYA N+ P+E ++LF +M +KPD+ +++ +S+
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 360 CAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISW 419
CA LG LD + ID++ F +L + NA+IDMYAKCG++ EVF+ M+ ++++
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 420 TSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTN 479
+ I+ A +G + + F + + I P+G TF+G+L C HAGL+ +G F +++
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 480 EYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAE 539
Y + EHYGCMVDL+GRA +L +A L+ MP PN ++WG+L++ CR+ + +LAE
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 540 FAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEV 599
K+L+ L+P + G V LSNIY+ RW + E+R M ++G+ K S IE+ +V
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKV 562
Query: 600 YEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLA 659
+EFL D+SH +D+IY KL ++ +E++ G+VP D+E+EEK V+ +HSEKLA
Sbjct: 563 HEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLA 622
Query: 660 LCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCK 719
+ GLIS+ IR+VKNLRVC DCH +KL+SK+ REIV+RD RFH + +G CSC
Sbjct: 623 VALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCN 682
Query: 720 DYW 722
DYW
Sbjct: 683 DYW 685
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/626 (40%), Positives = 389/626 (62%), Gaps = 2/626 (0%)
Query: 99 KHALKVFLKML-NEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTG 157
K A+ +F +M+ +E +T + + ++ A A+ E L G +V+ G + + +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 158 LVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPD 217
LV MY C I A+ +FD+ ++ + M Y + GL E L +F M S V PD
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 218 EMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFD 277
+ + +S+CS+ N+ +G++ H +++ N ++ + LI MY C D A +FD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 278 KVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKL 337
++ K +V ++V+GY G+V+ A F+ M EK+++ W+ +ISG + + +EA+++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 338 FNEMQVC-GMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYA 396
F MQ G+ D VTM+S+ SAC HLG LD A+ I+ YI+KN D+R+ ++DM++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 397 KCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIG 456
+CG ESA +F + R+V +WT+ I A A+ G+A A+ F+ M ++ + P+GV F+G
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 457 VLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFA 516
L ACSH GLV +G+EIF SM + + P+ HYGCMVDL GRA LL EA++L+E MP
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 517 PNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELR 576
PN VIW SL+AACRV G +E+A +AA+++ L P+ G+ VLLSN+YA RW D+ ++R
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 577 KSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIH 636
SMKE+G+ K S I++ + +EF + D SH + I L+EV G+VPD+
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 637 SALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVY 696
+ L+D++++EK ++ HSEKLA+ YGLISS K + IRIVKNLRVC DCH+F K SKVY
Sbjct: 757 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 816
Query: 697 AREIVIRDRTRFHHYKDGVCSCKDYW 722
REI++RD RFH+ + G CSC D+W
Sbjct: 817 NREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 250/488 (51%), Gaps = 45/488 (9%)
Query: 2 STLSQPT----KPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSF 57
+T ++P+ T T +++ +C ++ +K H + K + S + KL+ S
Sbjct: 18 TTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTK--QGLDNDVSTITKLVARSC 75
Query: 58 SLPTTTPSSLYYALSIFSQIPAPPS-RVSNKFIRAISWSHRPKHALKVFLKMLNEGLTID 116
L T SL +A +F + + + N IR + S A+ +FL+M+N G++ D
Sbjct: 76 ELGTR--ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPD 133
Query: 117 RFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFD 176
+++FP L A A++ G+Q+HGL K+G+ D FVQ LV Y CG++ AR +FD
Sbjct: 134 KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFD 193
Query: 177 KMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEM-KMSNVEPDEMVLSKILSACSRAGNLS 235
+MS R++V W+ MI GY + + ++LF M + V P+ + + ++SAC++ +L
Sbjct: 194 EMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Query: 236 YGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYS 295
GE V+ FI ++ + ++ + S L+ MY C +D+AK LFD+ NL + AM S Y
Sbjct: 254 TGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 296 RAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLS 355
R G +EAL +FN M G++PD+++MLS
Sbjct: 314 RQGLT-------------------------------REALGVFNLMMDSGVRPDRISMLS 342
Query: 356 VISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRN 415
IS+C+ L + + H Y+ +N F + NA+IDMY KC ++A +F+RM +
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 416 VISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFA 475
V++W S++ + +G+ A F M +++I V++ ++ L +E E+F
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFC 458
Query: 476 SMTNEYNI 483
SM ++ +
Sbjct: 459 SMQSQEGV 466
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/543 (43%), Positives = 348/543 (64%), Gaps = 33/543 (6%)
Query: 182 DIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSN-VEPDEMVLSKILSACSRAGNLSYGEAV 240
++ W+ +I GY + G +L+ EM++S VEPD ++ A + ++ GE +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 241 HEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQV 300
H +I + ++Q++L+ +YANCG V
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG-------------------------------DV 172
Query: 301 EDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISAC 360
A +FD+M EKDL+ W+++I+G+AEN P+EAL L+ EM G+KPD T++S++SAC
Sbjct: 173 ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSAC 232
Query: 361 AHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWT 420
A +G L +R+H+Y+ K +L +N ++D+YA+CG +E A+ +F+ M +N +SWT
Sbjct: 233 AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 421 SMINAFAIHGDARNALIFFNKMKD-ESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTN 479
S+I A++G + A+ F M+ E + P +TF+G+LYACSH G+V EG E F M
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 480 EYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAE 539
EY I P+ EH+GCMVDL RA +++A E +++MP PNVVIW +L+ AC VHG+ +LAE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 540 FAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEV 599
FA Q+LQL+P+H G VLLSN+YA ++RW DV ++RK M G+ K S +E+ N V
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRV 472
Query: 600 YEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLA 659
+EFL D+SH Q+D IY KL E+ L+ GYVP I + VD+E+EEK +++HSEK+A
Sbjct: 473 HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532
Query: 660 LCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCK 719
+ + LIS+ + S I +VKNLRVC DCH IKLVSKVY REIV+RDR+RFHH+K+G CSC+
Sbjct: 533 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQ 592
Query: 720 DYW 722
DYW
Sbjct: 593 DYW 595
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 223/435 (51%), Gaps = 45/435 (10%)
Query: 23 SSLTHMKQTHAQILKLSHSHHSQNSLLLK-LLLTSFSLPTTTPSSLYYALSIFSQIPAPP 81
SS+T ++Q HA + H ++ L K L+ SLP+ P S YA +FS+I P
Sbjct: 28 SSITKLRQIHA--FSIRHGVSISDAELGKHLIFYLVSLPSPPPMS--YAHKVFSKIEKPI 83
Query: 82 SR-VSNKFIRAISWSHRPKHALKVFLKMLNEGLT-IDRFSFPPILKAIARAEGLLEGMQV 139
+ + N IR + A ++ +M GL D ++P ++KA+ + G +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 140 HGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLF 199
H + + GFGS +VQ L+ +Y CG + A +FDKM +D+V W+ +I+G+ +NG
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 200 DEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTL 259
+E L L+ EM ++PD + +LSAC++ G L+ G+ VH ++I + + H + L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 260 ITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWS 319
+ +YA CG ++ AK LFD+++ KN V W+
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSV-------------------------------SWT 292
Query: 320 AMISGYAENNHPQEALKLFNEMQVC-GMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDK 378
++I G A N +EA++LF M+ G+ P ++T + ++ AC+H G++ + + +
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMR 351
Query: 379 NAFGGDLRVNN--AIIDMYAKCGSLESAREVFERM-RRRNVISWTSMINAFAIHGDARNA 435
+ + R+ + ++D+ A+ G ++ A E + M + NV+ W +++ A +HGD+
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD-- 409
Query: 436 LIFFNKMKDESIDPN 450
L F +++ ++PN
Sbjct: 410 LAEFARIQILQLEPN 424
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/684 (37%), Positives = 398/684 (58%), Gaps = 35/684 (5%)
Query: 74 FSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGL 133
F Q+P S I + A++V M+ EG+ +F+ +L ++A +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 134 LEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKM--------------- 178
G +VH KLG + V L+ MY CG + A+ +FD+M
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 179 ----------------SYRDIVPWSVMIDGYFQNGLFDEVLNLFEEM-KMSNVEPDEMVL 221
+ RDIV W+ MI G+ Q G L++F +M + S + PD L
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 222 SKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLL 281
+ +LSAC+ L G+ +H I+ + + + LI+MY+ CG ++ A+ L ++
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 282 KNLVVS--TAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFN 339
K+L + TA++ GY + G + A+ IF + ++D++ W+AMI GY ++ EA+ LF
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 340 EMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCG 399
M G +P+ T+ +++S + L L ++IH K+ + V+NA+I MYAK G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 400 SLESAREVFERMR-RRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVL 458
++ SA F+ +R R+ +SWTSMI A A HG A AL F M E + P+ +T++GV
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 459 YACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPN 518
AC+HAGLV++GR+ F M + I P HY CMVDLFGRA LL+EA E +E MP P+
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 519 VVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKS 578
VV WGSL++ACRVH I+L + AA++LL L+P++ GA L+N+Y+ +W++ ++RKS
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 579 MKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSA 638
MK+ + KE+ S IE+ ++V+ F D +H + ++IY + ++ E+K GYVPD S
Sbjct: 643 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 702
Query: 639 LVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAR 698
L DLE+E K +++ HSEKLA+ +GLIS+ + +RI+KNLRVC DCH IK +SK+ R
Sbjct: 703 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 762
Query: 699 EIVIRDRTRFHHYKDGVCSCKDYW 722
EI++RD TRFHH+KDG CSC+DYW
Sbjct: 763 EIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 226/495 (45%), Gaps = 68/495 (13%)
Query: 125 KAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSY---- 180
K++ ++ G VH K G ++ L+ +Y G L AR +FD+M
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 181 ---------------------------RDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSN 213
RD V W+ MI GY G + + + + +M
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 214 VEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAK 273
+EP + L+ +L++ + + G+ VH FI+ + + + ++L+ MYA CG MAK
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 274 GLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQE 333
+FD+++++++ AM++ + + GQ++ A F+QM E+D++ W++MISG+ + +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 334 ALKLFNEM-QVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAII 392
AL +F++M + + PD+ T+ SV+SACA+L L ++IH +I F V NA+I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 393 DMYAKCGSLESAREVFER---------------------------------MRRRNVISW 419
MY++CG +E+AR + E+ ++ R+V++W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 420 TSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTN 479
T+MI + HG A+ F M PN T +L S + G++I S
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 480 EYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELA- 538
I ++ ++ +A + A + + + V W S++ A HG E A
Sbjct: 442 SGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 539 EFAAKQLLQ-LDPDH 552
E L++ L PDH
Sbjct: 501 ELFETMLMEGLRPDH 515
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 164/337 (48%), Gaps = 43/337 (12%)
Query: 216 PDEMVLSKILSACS----RAGNLSYG----EAVHEFIIDNNVALDAHLQSTLITMYANCG 267
P + LS +L C+ ++ N S G + VH +I + + +L + L+ +Y+ G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 268 CMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAE 327
A+ LFD++ L+ ++S YS+ G ++ FDQ+ ++D + W+ MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 328 NNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRV 387
+A+++ +M G++P + T+ +V+++ A ++ +++H +I K G++ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 388 NNAIIDMYAKCGSLESAREVFER-------------------------------MRRRNV 416
+N++++MYAKCG A+ VF+R M R++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 417 ISWTSMINAFAIHGDARNALIFFNKM-KDESIDPNGVTFIGVLYACSHAGLVDEGREIFA 475
++W SMI+ F G AL F+KM +D + P+ T VL AC++ + G++I +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 476 SM-TNEYNIPPKYEHYGCMVDLFGRANLLREALELVE 511
+ T ++I ++ ++ R + A L+E
Sbjct: 304 HIVTTGFDISGIV--LNALISMYSRCGGVETARRLIE 338
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 95/255 (37%), Gaps = 66/255 (25%)
Query: 26 THMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIPAPPSRVS 85
+H KQ H +K + S L+T ++ S A F I VS
Sbjct: 430 SHGKQIHGSAVKSGEIYSVSVS---NALITMYAKAGNITS----ASRAFDLIRCERDTVS 482
Query: 86 -NKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGT 144
I A++ + AL++F ML EGL D ++
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITY------------------------ 518
Query: 145 KLGFGSDPFVQTGLVGMYGAC---GKILDARLMFDKMSYRD-IVP----WSVMIDGYFQN 196
VG++ AC G + R FD M D I+P ++ M+D + +
Sbjct: 519 --------------VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 197 GLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFII----DNNVALD 252
GL E E+M +EPD + +LSAC N+ G+ E ++ +N+ A
Sbjct: 565 GLLQEAQEFIEKMP---IEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYS 621
Query: 253 AHLQSTLITMYANCG 267
A L +Y+ CG
Sbjct: 622 A-----LANLYSACG 631
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/732 (34%), Positives = 408/732 (55%), Gaps = 46/732 (6%)
Query: 30 QTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIPAPPSRVSNKFI 89
Q HA+ILK S + + L+ S+S + A + IP P + I
Sbjct: 36 QAHARILK---SGAQNDGYISAKLIASYS----NYNCFNDADLVLQSIPDPTIYSFSSLI 88
Query: 90 RAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFG 149
A++ + ++ VF +M + GL D P + K A G Q+H + G
Sbjct: 89 YALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 150 SDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEM 209
D FVQ + MY CG++ DAR +FD+MS +D+V S ++ Y + G +EV+ + EM
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 210 KMSNVE-----------------------------------PDEMVLSKILSACSRAGNL 234
+ S +E PD++ +S +L + + L
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 235 SYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGY 294
+ G +H ++I + D + S +I MY G + LF++ + V A ++G
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 295 SRAGQVEDARLIFD----QMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDK 350
SR G V+ A +F+ Q +E +++ W+++I+G A+N EAL+LF EMQV G+KP+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 351 VTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFER 410
VT+ S++ AC ++ L + H + + ++ V +A+IDMYAKCG + ++ VF
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 411 MRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEG 470
M +N++ W S++N F++HG A+ + F + + P+ ++F +L AC GL DEG
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 471 REIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACR 530
+ F M+ EY I P+ EHY CMV+L GRA L+EA +L++ MPF P+ +WG+L+ +CR
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 531 VHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERAC 590
+ ++LAE AA++L L+P++ G VLLSNIYA W +V +R M+ G+ K C
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 591 SRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREV 650
S I++ N VY L D+SH Q DQI EK++E+ E++ +G+ P++ AL D+E++E+ ++
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQM 688
Query: 651 ILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHH 710
+ HSEKLA+ +GL+++ + ++++KNLR+C DCH IK +S REI IRD RFHH
Sbjct: 689 LWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHH 748
Query: 711 YKDGVCSCKDYW 722
+KDG+CSC D+W
Sbjct: 749 FKDGICSCGDFW 760
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/654 (38%), Positives = 379/654 (57%), Gaps = 35/654 (5%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLT-IDRFSFPPILKAIA 128
A +F ++P + + N I + +++VF ++NE T +D + IL A+A
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 129 RAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSV 188
+ L GMQ+H L TK G S +V TG + +Y CGKI +F + DIV ++
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 189 MIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNN 248
MI GY NG + L+LF+E+ +S + S ++S +G+L A+H + + +N
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGAR---LRSSTLVSLVPVSGHLMLIYAIHGYCLKSN 349
Query: 249 VALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFD 308
L + VSTA+ + YS+ ++E AR +FD
Sbjct: 350 -------------------------------FLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 309 QMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQ 368
+ EK L W+AMISGY +N ++A+ LF EMQ P+ VT+ ++SACA LG L
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 369 AQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAI 428
+ +H + F + V+ A+I MYAKCGS+ AR +F+ M ++N ++W +MI+ + +
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 429 HGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYE 488
HG + AL F +M + I P VTF+ VLYACSHAGLV EG EIF SM + Y P +
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 489 HYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQL 548
HY CMVD+ GRA L+ AL+ +E M P +W +L+ ACR+H + LA +++L +L
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 549 DPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRS 608
DPD+ G VLLSNI++ D+ + +R++ K+R + K + IE+ + F + D+S
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 678
Query: 609 HKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSK 668
H Q +IYEKL ++ +++ AGY P+ AL D+E+EE+ ++ HSE+LA+ +GLI+++
Sbjct: 679 HPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 738
Query: 669 KDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ IRI+KNLRVC DCH KL+SK+ R IV+RD RFHH+KDGVCSC DYW
Sbjct: 739 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 192/446 (43%), Gaps = 85/446 (19%)
Query: 138 QVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNG 197
Q H GF +D + T L G I AR +F + D+ ++V++ G+ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 198 LFDEVLNLFEEMKMS-NVEPDEMVLSKILSACS-----RAGNLSYGEAVHEFIIDNNVAL 251
L++F ++ S +++P+ + +SA S RAG + +G+AV +D
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV----VD----- 148
Query: 252 DAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMV 311
GC L++ + +V Y + +VEDAR +FD+M
Sbjct: 149 ---------------GCDS------------ELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 312 EKDLICWSAMISGYAENNHPQEALKLFNEM--QVCGMKPDKVTMLSVISACAHLGVLDQA 369
EKD I W+ MISGY +N E++++F ++ + C + D T+L ++ A A L L
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESC-TRLDTTTLLDILPAVAELQELRLG 240
Query: 370 QRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIH 429
+IH K V I +Y+KCG ++ +F R+ +++++ +MI+ + +
Sbjct: 241 MQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSN 300
Query: 430 GDARNALIFFNKMKDESIDPNGVTFIG---------VLYAC----------SHAGL---- 466
G+ +L F ++ T + ++YA SHA +
Sbjct: 301 GETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTAL 360
Query: 467 ---------VDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETM---P 514
++ R++F + E ++P + M+ + + L +A+ L M
Sbjct: 361 TTVYSKLNEIESARKLFDE-SPEKSLPS----WNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 515 FAPNVVIWGSLMAACRVHGEIELAEF 540
F+PN V +++AC G + L ++
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKW 441
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/603 (40%), Positives = 363/603 (60%), Gaps = 4/603 (0%)
Query: 124 LKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVG--MYGACGKILD-ARLMFDKMSY 180
+ + R E Q+H K G D + T + + L A+++FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 181 RDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAV 240
D W++MI G+ + + L L++ M S+ + +L ACS +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 241 HEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQV 300
H I D + ++LI YA G +A LFD++ + V +++ GY +AG++
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 301 EDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISAC 360
+ A +F +M EK+ I W+ MISGY + + +EAL+LF+EMQ ++PD V++ + +SAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 361 AHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWT 420
A LG L+Q + IH Y++K D + +IDMYAKCG +E A EVF+ +++++V +WT
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 421 SMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNE 480
++I+ +A HG R A+ F +M+ I PN +TF VL ACS+ GLV+EG+ IF SM +
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 481 YNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEF 540
YN+ P EHYGC+VDL GRA LL EA ++ MP PN VIWG+L+ ACR+H IEL E
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 541 AAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVY 600
+ L+ +DP H G V +NI+A DK+W E R+ MKE+G+ K CS I + +
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 601 EFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVIL-WHSEKLA 659
EFL DRSH + ++I K + +L+ GYVP++ L+DL D+++RE I+ HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 660 LCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCK 719
+ YGLI +K + IRI+KNLRVC+DCH KL+SK+Y R+IV+RDRTRFHH++DG CSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 720 DYW 722
DYW
Sbjct: 618 DYW 620
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 212/450 (47%), Gaps = 68/450 (15%)
Query: 15 TSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIF 74
T + + CS +KQ HA++LK + Q+S + L SF + +T+ L YA +F
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLK---TGLMQDSYAITKFL-SFCISSTSSDFLPYAQIVF 72
Query: 75 SQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLL 134
P + + N IR S S P+ +L ++ +ML + ++FP +LKA +
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 135 EGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFD------------------ 176
E Q+H TKLG+ +D + L+ Y G A L+FD
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 177 -------------KMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSK 223
KM+ ++ + W+ MI GY Q + E L LF EM+ S+VEPD + L+
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 224 ILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKN 283
LSAC++ G L G+ +H ++ + +D+ L LI MYA CG M+ A +F + K+
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 284 LVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQV 343
+ TA++SGY+ G H +EA+ F EMQ
Sbjct: 313 VQAWTALISGYAYHG-------------------------------HGREAISKFMEMQK 341
Query: 344 CGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKN-AFGGDLRVNNAIIDMYAKCGSLE 402
G+KP+ +T +V++AC++ G++++ + I ++++ + I+D+ + G L+
Sbjct: 342 MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 401
Query: 403 SAREVFERMR-RRNVISWTSMINAFAIHGD 431
A+ + M + N + W +++ A IH +
Sbjct: 402 EAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/614 (39%), Positives = 381/614 (62%), Gaps = 12/614 (1%)
Query: 117 RFSFPPILKA---IARAEGLLEGMQVHGLGTK---LGFGSDPFVQTGLVGMYGACGKILD 170
RF PP K I +++ + E +Q+H + L P + L Y + GKI
Sbjct: 23 RFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRH 82
Query: 171 ARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSR 230
+ +F + D+ ++ I+ NGL D+ L+ ++ S + P+E S +L +CS
Sbjct: 83 SLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST 142
Query: 231 AGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAM 290
G+ +H ++ + +D ++ + L+ +YA G + A+ +FD++ ++LV STAM
Sbjct: 143 KS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAM 198
Query: 291 VSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGM-KPD 349
++ Y++ G VE AR +FD M E+D++ W+ MI GYA++ P +AL LF ++ G KPD
Sbjct: 199 ITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPD 258
Query: 350 KVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFE 409
++T+++ +SAC+ +G L+ + IH+++ + +++V +IDMY+KCGSLE A VF
Sbjct: 259 EITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFN 318
Query: 410 RMRRRNVISWTSMINAFAIHGDARNALIFFNKMKD-ESIDPNGVTFIGVLYACSHAGLVD 468
R+++++W +MI +A+HG +++AL FN+M+ + P +TFIG L AC+HAGLV+
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVN 378
Query: 469 EGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAA 528
EG IF SM EY I PK EHYGC+V L GRA L+ A E ++ M + V+W S++ +
Sbjct: 379 EGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Query: 529 CRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKER 588
C++HG+ L + A+ L+ L+ + G VLLSNIYA ++ V ++R MKE+GI+KE
Sbjct: 439 CKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEP 498
Query: 589 ACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKR 648
S IE+ N+V+EF DR H ++ +IY L ++ +K GYVP+ ++ L DLE+ EK
Sbjct: 499 GISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKE 558
Query: 649 EVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRF 708
+ + HSE+LA+ YGLIS+K S ++I KNLRVC DCH KL+SK+ R+IV+RDR RF
Sbjct: 559 QSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRF 618
Query: 709 HHYKDGVCSCKDYW 722
HH+ DG CSC D+W
Sbjct: 619 HHFTDGSCSCGDFW 632
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 213/449 (47%), Gaps = 76/449 (16%)
Query: 19 ISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIP 78
I S+ + Q HA IL+ + H + +L L +++ + + ++L++F Q
Sbjct: 36 IDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYA----SHGKIRHSLALFHQTI 91
Query: 79 APPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQ 138
P + I S + A +++++L+ + + F+F +LK+ + G L
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL---- 147
Query: 139 VHGLGTKLGFGSDPFVQTGLVGMYGACG------KILD---------------------- 170
+H K G G DP+V TGLV +Y G K+ D
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 171 ---ARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEE-MKMSNVEPDEMVLSKILS 226
AR +FD M RDIV W+VMIDGY Q+G ++ L LF++ + +PDE+ + LS
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 227 ACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVV 286
ACS+ G L G +H F+ + + L+ + + LI MY+ CG ++ A +F+ K++V
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 287 STAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQ-VCG 345
AM++GY+ G + Q+AL+LFNEMQ + G
Sbjct: 328 WNAMIAGYAMHG-------------------------------YSQDALRLFNEMQGITG 356
Query: 346 MKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNN--AIIDMYAKCGSLES 403
++P +T + + ACAH G++++ RI + + +G ++ + ++ + + G L+
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE-YGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 404 AREVFERMRR-RNVISWTSMINAFAIHGD 431
A E + M + + W+S++ + +HGD
Sbjct: 416 AYETIKNMNMDADSVLWSSVLGSCKLHGD 444
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/693 (36%), Positives = 384/693 (55%), Gaps = 41/693 (5%)
Query: 70 ALSIFSQIPA--PPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAI 127
A +F + P + + N I S ++ A+ +F KM +EG D F+F +L +
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGL 158
Query: 128 AR-AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGK----ILDARLMFDKMSYRD 182
A A+ + +Q H K G G V LV +Y C + AR +FD++ +D
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 183 IVPWSVMIDGYFQNGLFD--------------------------------EVLNLFEEMK 210
W+ M+ GY +NG FD E L + M
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV 278
Query: 211 MSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMD 270
S +E DE ++ AC+ AG L G+ VH +++ H ++L+++Y CG D
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFD 337
Query: 271 MAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNH 330
A+ +F+K+ K+LV A++SGY +G + +A+LIF +M EK+++ W MISG AEN
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 331 PQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNA 390
+E LKLF+ M+ G +P I +CA LG Q+ H + K F L NA
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 391 IIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPN 450
+I MYAKCG +E AR+VF M + +SW ++I A HG A+ + +M + I P+
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 451 GVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELV 510
+T + VL ACSHAGLVD+GR+ F SM Y IPP +HY ++DL R+ +A ++
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 511 ETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQ 570
E++PF P IW +L++ CRVHG +EL AA +L L P+HDG +LLSN++A +W+
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWE 637
Query: 571 DVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAG 630
+V +RK M++RG+ KE ACS IEM +V+ FL D SH + + +Y L ++ E++ G
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Query: 631 YVPDIHSALVDLE-DEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFI 689
YVPD L D+E D K +++ HSEK+A+ +GL+ + IRI KNLR C DCHNF
Sbjct: 698 YVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFF 757
Query: 690 KLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ +S V R+I++RDR RFHH+++G CSC ++W
Sbjct: 758 RFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 207/451 (45%), Gaps = 44/451 (9%)
Query: 151 DPFVQTGLVGMYGACGKILDARLMFDK--MSYRDIVPWSVMIDGYFQNGLFDEVLNLFEE 208
D +T +V Y A G I AR +F+K + RD V ++ MI G+ N +NLF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 209 MKMSNVEPDEMVLSKILSACSR-AGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCG 267
MK +PD + +L+ + A + H + + + + L+++Y+ C
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 268 C----MDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEK-DLICWSAMI 322
+ A+ +FD++L K+ T M++GY + G + + + M + L+ ++AMI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 323 SGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFG 382
SGY QEAL++ M G++ D+ T SVI ACA G+L +++H Y+ +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-D 317
Query: 383 GDLRVNNAIIDMYAKCGSLESAREVFER-------------------------------M 411
+N+++ +Y KCG + AR +FE+ M
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 412 RRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGR 471
+ +N++SW MI+ A +G L F+ MK E +P F G + +C+ G G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 472 EIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRV 531
+ A + + ++ ++ + ++ EA ++ TMP + V W +L+AA
Sbjct: 438 QYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNALIAALGQ 495
Query: 532 HGEIELAEFAAKQLLQ--LDPDHDGALVLLS 560
HG A +++L+ + PD L +L+
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 175/356 (49%), Gaps = 44/356 (12%)
Query: 230 RAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTA 289
R +L AVH II AH+ + LI +Y ++ A+ LFD++ + + T
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 290 MVSGYSRAGQVEDARLIFDQ--MVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMK 347
MVSGY +G + AR +F++ + +D + ++AMI+G++ NN A+ LF +M+ G K
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 348 PDKVTMLSVISACAHLGVLDQAQ--RIHLYIDKNAFGGDLRVNNAIIDMYAKCGS----L 401
PD T SV++ A L D+ Q + H K+ G V+NA++ +Y+KC S L
Sbjct: 146 PDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 402 ESAREVFERMRRRNVISWTSMINAFAIHGD------------------ARNALI------ 437
SAR+VF+ + ++ SWT+M+ + +G A NA+I
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 438 -FFN-------KMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEH 489
F+ +M I+ + T+ V+ AC+ AGL+ G+++ A + + +++
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN 324
Query: 490 YGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQL 545
+V L+ + EA + E MP A ++V W +L++ G I A+ K++
Sbjct: 325 --SLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/735 (33%), Positives = 400/735 (54%), Gaps = 75/735 (10%)
Query: 24 SLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIPAPPSR 83
S + KQ HAQ ++ H+ S+++ + T L+ AL +F + +PP
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTSASIVISIY--------TNLKLLHEALLLFKTLKSPPVL 71
Query: 84 VSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLG 143
IR + AL F++M G D FP +LK+ L G VHG
Sbjct: 72 AWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131
Query: 144 TKLGFGSDPFVQTGLVGMYG---------ACGKILD------------------------ 170
+LG D + L+ MY + G + D
Sbjct: 132 VRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG 191
Query: 171 ---ARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSA 227
R +F+ M +D+V ++ +I GY Q+G++++ L + EM ++++PD LS +L
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 228 CSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVS 287
S ++ G+ +H ++I + D ++ S+L+ MYA
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA----------------------- 288
Query: 288 TAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMK 347
++ ++ED+ +F ++ +D I W+++++GY +N EAL+LF +M +K
Sbjct: 289 --------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 348 PDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREV 407
P V SVI ACAHL L +++H Y+ + FG ++ + +A++DMY+KCG++++AR++
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 408 FERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLV 467
F+RM + +SWT++I A+HG A+ F +MK + + PN V F+ VL ACSH GLV
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 468 DEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMA 527
DE F SMT Y + + EHY + DL GRA L EA + M P +W +L++
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Query: 528 ACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKE 587
+C VH +ELAE A+++ +D ++ GA VL+ N+YA + RW+++ +LR M+++G+ K+
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Query: 588 RACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEK 647
ACS IEM N+ + F++ DRSH D+I E L V+ +++ GYV D L D+++E K
Sbjct: 581 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHK 640
Query: 648 REVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTR 707
RE++ HSE+LA+ +G+I+++ + IR+ KN+R+C DCH IK +SK+ REI++RD +R
Sbjct: 641 RELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSR 700
Query: 708 FHHYKDGVCSCKDYW 722
FHH+ G CSC DYW
Sbjct: 701 FHHFNRGNCSCGDYW 715
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/711 (35%), Positives = 391/711 (54%), Gaps = 43/711 (6%)
Query: 15 TSTAISSCSSLTHMKQTHAQILKLSHSHHSQ--NSLLLKLLLTSFSLPTTTPSSLYYALS 72
S + SS S+ +Q H ILK + NSL+ +F L S A
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLV------AFYLKNQRVDS---ARK 251
Query: 73 IFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEG 132
+F ++ N I + + L VF++ML G+ ID + + A +
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 133 LLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDG 192
+ G VH +G K F + L+ MY CG + A+ +F +MS R +V ++ MI G
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 193 YFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALD 252
Y + GL E + LFEEM+ + PD ++ +L+ C+R L G+ VHE+I +N++ D
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 253 AHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVE 312
+ + L+ MYA + G +++A L+F +M
Sbjct: 432 IFVSNALMDMYA-------------------------------KCGSMQEAELVFSEMRV 460
Query: 313 KDLICWSAMISGYAENNHPQEALKLFNEM-QVCGMKPDKVTMLSVISACAHLGVLDQAQR 371
KD+I W+ +I GY++N + EAL LFN + + PD+ T+ V+ ACA L D+ +
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 372 IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGD 431
IH YI +N + D V N+++DMYAKCG+L A +F+ + ++++SWT MI + +HG
Sbjct: 521 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 432 ARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYG 491
+ A+ FN+M+ I+ + ++F+ +LYACSH+GLVDEG F M +E I P EHY
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 492 CMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPD 551
C+VD+ R L +A +E MP P+ IWG+L+ CR+H +++LAE A+++ +L+P+
Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Query: 552 HDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQ 611
+ G VL++NIYA+ ++W+ V LRK + +RG+ K CS IE+ V F+ D S+ +
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPE 760
Query: 612 TDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDS 671
T+ I L +V + + GY P AL+D E+ EK E + HSEKLA+ G+ISS
Sbjct: 761 TENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGK 820
Query: 672 CIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
IR+ KNLRVC DCH K +SK+ REIV+RD RFH +KDG CSC+ +W
Sbjct: 821 IIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 208/414 (50%), Gaps = 33/414 (7%)
Query: 115 IDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLM 174
ID + +L+ A ++ L +G +V GF D + + L MY CG + +A +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 175 FDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNL 234
FD++ + W+++++ ++G F + LF++M S VE D S + + S ++
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 235 SYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGY 294
GE +H FI+ + + ++L+ Y LKN
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFY-----------------LKN----------- 243
Query: 295 SRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTML 354
+V+ AR +FD+M E+D+I W+++I+GY N ++ L +F +M V G++ D T++
Sbjct: 244 ---QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 355 SVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRR 414
SV + CA ++ + +H K F + R N ++DMY+KCG L+SA+ VF M R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 415 NVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIF 474
+V+S+TSMI +A G A A+ F +M++E I P+ T VL C+ L+DEG+ +
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 475 ASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAA 528
E ++ ++D++ + ++EA ELV + +++ W +++
Sbjct: 421 -EWIKENDLGFDIFVSNALMDMYAKCGSMQEA-ELVFSEMRVKDIISWNTIIGG 472
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/717 (36%), Positives = 405/717 (56%), Gaps = 42/717 (5%)
Query: 10 PLTLPTSTAISSCSSLTHMK---QTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS 66
P + +A+++C ++ K + HA +LK S HS + L+ ++ P
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLK--SSTHSSELYVCNALIAMYTRCGKMPQ- 338
Query: 67 LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126
A I Q+ N I+ + K AL+ F M+ G D S I+ A
Sbjct: 339 ---AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPW 186
R LL GM++H K G+ S+ V L+ MY C F +M +D++ W
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 187 SVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246
+ +I GY QN E L LF ++ +E DEM+L IL A S ++ + +H I+
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 247 NNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLI 306
+ LD +Q+ L+ +Y C M GY A +
Sbjct: 516 KGL-LDTVIQNELVDVYGKCRNM-----------------------GY--------ATRV 543
Query: 307 FDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVL 366
F+ + KD++ W++MIS A N + EA++LF M G+ D V +L ++SA A L L
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 367 DQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAF 426
++ + IH Y+ + F + + A++DMYA CG L+SA+ VF+R+ R+ ++ +TSMINA+
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 663
Query: 427 AIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPK 486
+HG + A+ F+KM+ E++ P+ ++F+ +LYACSHAGL+DEGR M +EY + P
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 487 YEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLL 546
EHY C+VD+ GRAN + EA E V+ M P +W +L+AACR H E E+ E AA++LL
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 547 QLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTAD 606
+L+P + G LVL+SN++A+ RW DV ++R MK G+ K CS IEM+ +V++F D
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD 843
Query: 607 RSHKQTDQIYEKLNEVISEL-KPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLI 665
+SH ++ +IYEKL+EV +L + GYV D L ++++ EK +++ HSE++A+ YGL+
Sbjct: 844 KSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLL 903
Query: 666 SSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ +C+RI KNLRVC DCH F KLVSK++ R+IV+RD RFHH++ G+CSC D W
Sbjct: 904 RTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 215/503 (42%), Gaps = 52/503 (10%)
Query: 77 IPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLT----------IDRFSFPPILKA 126
IP PS N F ++ P L F +L E ++ F++ +L+
Sbjct: 32 IPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAY--VLEL 89
Query: 127 IARAEGLLEGMQVHG--LGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIV 184
+ + +G Q+H T F D F+ LV MYG CG + DA +FD+M R
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAF 148
Query: 185 PWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFI 244
W+ MI Y NG L L+ M++ V +L AC++ ++ G +H +
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 245 IDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDAR 304
+ + + L++MYA + A+ LFD G+ G
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD---------------GFQEKG------ 247
Query: 305 LIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLG 364
D + W++++S Y+ + E L+LF EM + G P+ T++S ++AC
Sbjct: 248 ---------DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 365 VLDQAQRIHLYIDKNA-FGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMI 423
+ IH + K++ +L V NA+I MY +CG + A + +M +V++W S+I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 424 NAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNI 483
+ + + AL FF+ M + V+ ++ A + G E+ A + ++
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI-KHGW 417
Query: 484 PPKYEHYGCMVDLFGRANLL----REALELVETMPFAPNVVIWGSLMAACRVHGEIELAE 539
+ ++D++ + NL R L + + + VI G C V +EL
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA-LELFR 476
Query: 540 FAAKQLLQLDPDHDGALVLLSNI 562
AK+ +++D G+++ S++
Sbjct: 477 DVAKKRMEIDEMILGSILRASSV 499
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/573 (41%), Positives = 358/573 (62%), Gaps = 25/573 (4%)
Query: 171 ARLMFDKMSYRDIVPWSVMIDGYFQNGLFDE-----VLNLFEEMKMSN--VEPDEMVLSK 223
A +F++M R+ W+ +I G+ ++ DE + LF EM MS+ VEP+
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSES---DEDKALIAITLFYEM-MSDEFVEPNRFTFPS 133
Query: 224 ILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDK-VLLK 282
+L AC++ G + G+ +H + D + S L+ MY CG M A+ LF K ++ K
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 283 NLVVST-------------AMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENN 329
++VV T M+ GY R G + AR++FD+M ++ ++ W+ MISGY+ N
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 330 HPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNN 389
++A+++F EM+ ++P+ VT++SV+ A + LG L+ + +HLY + + D + +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 390 AIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDP 449
A+IDMY+KCG +E A VFER+ R NVI+W++MIN FAIHG A +A+ F KM+ + P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 450 NGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALEL 509
+ V +I +L ACSH GLV+EGR F+ M + + P+ EHYGCMVDL GR+ LL EA E
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 510 VETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRW 569
+ MP P+ VIW +L+ ACR+ G +E+ + A L+ + P GA V LSN+YA W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 570 QDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPA 629
+V E+R MKE+ I K+ CS I+++ ++EF+ D SH + +I L E+ +L+ A
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 630 GYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFI 689
GY P L++LE+E+K V+ +HSEK+A +GLIS+ IRIVKNLR+CEDCH+ I
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 690 KLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
KL+SKVY R+I +RDR RFHH++DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 216/464 (46%), Gaps = 84/464 (18%)
Query: 19 ISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIP 78
I++C ++ + Q HA +K S +++L +L + L YA IF+Q+P
Sbjct: 30 INNCRTIRDLSQIHAVFIK---SGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 79 APPSRVSNKFIRAISWSHRPKH--ALKVFLKML-NEGLTIDRFSFPPILKAIARAEGLLE 135
N IR S S K A+ +F +M+ +E + +RF+FP +LKA A+ + E
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 136 GMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILD------------------------- 170
G Q+HGL K GFG D FV + LV MY CG + D
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 171 --------------------ARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMK 210
AR++FDKM R +V W+ MI GY NG F + + +F EMK
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 211 MSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMD 270
++ P+ + L +L A SR G+L GE +H + D+ + +D L S LI MY+ CG ++
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 271 MAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNH 330
A +F+++ +N++ +AM++G++ GQ D
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGD---------------------------- 358
Query: 331 PQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQR-IHLYIDKNAFGGDLRVNN 389
A+ F +M+ G++P V +++++AC+H G++++ +R + + +
Sbjct: 359 ---AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG 415
Query: 390 AIIDMYAKCGSLESAREVFERMR-RRNVISWTSMINAFAIHGDA 432
++D+ + G L+ A E M + + + W +++ A + G+
Sbjct: 416 CMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Query: 401 LESAREVFERMRRRNVISWTSMINAFAIHGDARNALI----FFNKMKDESIDPNGVTFIG 456
L+ A ++F +M +RN SW ++I F+ D ALI F+ M DE ++PN TF
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFS-ESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 457 VLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLR 504
VL AC+ G + EG++I + + KY G D F +NL+R
Sbjct: 134 VLKACAKTGKIQEGKQI-------HGLALKYGFGG---DEFVMSNLVR 171
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/644 (39%), Positives = 369/644 (57%), Gaps = 36/644 (5%)
Query: 86 NKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTK 145
N I ++ S AL F M L R SFP +KA + + G Q H
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 146 LGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNL 205
G+ SD FV + L+ MY CGK+ DAR +FD++ R+IV W+ MI GY NG + ++L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 206 FEEMKMSNVEPDE------MVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTL 259
F+++ + + D+ M L ++SACSR E++H F+I + +TL
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 260 ITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWS 319
+ YA G G V AR IFDQ+V+KD + ++
Sbjct: 225 LDAYAKGG-----------------------------EGGVAVARKIFDQIVDKDRVSYN 255
Query: 320 AMISGYAENNHPQEALKLFNEM-QVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDK 378
+++S YA++ EA ++F + + + + +T+ +V+ A +H G L + IH + +
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
Query: 379 NAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIF 438
D+ V +IIDMY KCG +E+AR+ F+RM+ +NV SWT+MI + +HG A AL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 439 FNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFG 498
F M D + PN +TF+ VL ACSHAGL EG F +M + + P EHYGCMVDL G
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLG 435
Query: 499 RANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVL 558
RA L++A +L++ M P+ +IW SL+AACR+H +ELAE + +L +LD + G +L
Sbjct: 436 RAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYML 495
Query: 559 LSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEK 618
LS+IYA RW+DV +R MK RG++K S +E+N EV+ FL D H Q ++IYE
Sbjct: 496 LSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEF 555
Query: 619 LNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKN 678
L E+ +L AGYV + S D+++EEK + HSEKLA+ +G++++ S + +VKN
Sbjct: 556 LAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKN 615
Query: 679 LRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
LRVC DCHN IKL+SK+ RE V+RD RFHH+KDG CSC DYW
Sbjct: 616 LRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 282 KNLVVSTAMVSGYSRAGQVEDARLIFDQMVEK-DLICWSAMISGYAENNHPQEALKLFNE 340
K L S + + R + ++ +F++ V+K D+ W+++I+ A + EAL F+
Sbjct: 7 KALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSS 66
Query: 341 MQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGS 400
M+ + P + + I AC+ L + ++ H + D+ V++A+I MY+ CG
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 401 LESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKM------KDESIDPNGVTF 454
LE AR+VF+ + +RN++SWTSMI + ++G+A +A+ F + D+++ + +
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 455 IGVLYACS 462
+ V+ ACS
Sbjct: 187 VSVISACS 194
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 413 RRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGRE 472
+ +V SW S+I A GD+ AL+ F+ M+ S+ P +F + ACS + G++
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 473 IFASMTNEYNIPPKYEH----YGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAA 528
T++ Y+ ++ ++ L +A ++ + +P N+V W S++
Sbjct: 98 -----THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KRNIVSWTSMIRG 151
Query: 529 CRVHGEIELAEFAAKQLLQLDPDHDGALVLLS 560
++G A K LL + D D A+ L S
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDS 183
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/607 (38%), Positives = 360/607 (59%), Gaps = 42/607 (6%)
Query: 158 LVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPD 217
L+ Y + + AR +FD++ R+++ +VMI Y NG + E + +F M NV PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 218 EMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFD 277
+L ACS +G + G +H ++ + + L++MY CG + A+ + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 278 KVLLKNLVVSTAMVSGYSRAGQVEDA---------------------------------- 303
++ +++V ++V GY++ + +DA
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 304 ---RLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISAC 360
+ +F +M +K L+ W+ MI Y +N P EA++L++ M+ G +PD V++ SV+ AC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 361 AHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWT 420
L ++IH YI++ +L + NA+IDMYAKCG LE AR+VFE M+ R+V+SWT
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 421 SMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNE 480
+MI+A+ G +A+ F+K++D + P+ + F+ L ACSHAGL++EGR F MT+
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 481 YNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEF 540
Y I P+ EH CMVDL GRA ++EA ++ M PN +WG+L+ ACRVH + ++
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 541 AAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVY 600
AA +L QL P+ G VLLSNIYAK RW++V +R MK +G+ K S +E+N ++
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 601 EFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLAL 660
FL DRSH Q+D+IY +L+ ++ ++K GYVPD SAL D+E+E+K + HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 661 CYGLISSKKD-----SCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGV 715
+ L+++K++ + IRI KNLR+C DCH KL+S++ +REI+IRD RFH ++ GV
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 716 CSCKDYW 722
CSC DYW
Sbjct: 680 CSCGDYW 686
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 214/437 (48%), Gaps = 44/437 (10%)
Query: 45 QNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKV 104
+SL +KL+ SL A +F +IP + N IR+ + +KV
Sbjct: 73 NSSLGVKLMRAYASLKDVAS-----ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKV 127
Query: 105 FLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGA 164
F M + D ++FP +LKA + + ++ G ++HG TK+G S FV GLV MYG
Sbjct: 128 FGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK 187
Query: 165 CGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKI 224
CG + +ARL+ D+MS RD+V W+ ++ GY QN FD+ L + EM+ + D ++ +
Sbjct: 188 CGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 225 LSACSRAG--NLSYGEAV-----HEFIIDNNVALDAHLQSTL----ITMYAN-------- 265
L A S N+ Y + + + ++ NV + ++++ + + +Y+
Sbjct: 248 LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 266 -----------CG---CMDMAKGLFD----KVLLKNLVVSTAMVSGYSRAGQVEDARLIF 307
CG + + K + K L+ NL++ A++ Y++ G +E AR +F
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 308 DQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLD 367
+ M +D++ W+AMIS Y + +A+ LF+++Q G+ PD + ++ ++AC+H G+L+
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 368 QAQR-IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRR-NVISWTSMINA 425
+ + L D L ++D+ + G ++ A + M N W +++ A
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 426 FAIHGDARNALIFFNKM 442
+H D L+ +K+
Sbjct: 488 CRVHSDTDIGLLAADKL 504
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 166/367 (45%), Gaps = 45/367 (12%)
Query: 283 NLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQ 342
N + ++ Y+ V AR +FD++ E+++I + MI Y N E +K+F M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 343 VCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLE 402
C ++PD T V+ AC+ G + ++IH K L V N ++ MY KCG L
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 403 SAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACS 462
AR V + M RR+V+SW S++ +A + +AL +M+ I + T +L A S
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 463 HAGL--VDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMP---FAP 517
+ V +++F M + + + M+ ++ + + EA+EL M F P
Sbjct: 253 NTTTENVMYVKDMFFKMGKKSLVS-----WNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 518 NVVIWGSLMAAC----------RVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDK 567
+ V S++ AC ++HG IE + LL+ AL+ ++YAK
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE------NALI---DMYAKCG 358
Query: 568 RWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELK 627
+ ++ ++MK R ++ A Y F S + D + + S+L+
Sbjct: 359 CLEKARDVFENMKSRDVVSWTAMI------SAYGF-----SGRGCDAV-----ALFSKLQ 402
Query: 628 PAGYVPD 634
+G VPD
Sbjct: 403 DSGLVPD 409
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/634 (39%), Positives = 367/634 (57%), Gaps = 42/634 (6%)
Query: 98 PKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTG 157
P+ A++ FL M+ G D+F+ + A A E L G Q+H + G D V+
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECS 307
Query: 158 LVGMYGAC---GKILDARLMFDKMSYRDIVPWSVMIDGYFQN-GLFDEVLNLFEEM-KMS 212
LV MY C G + D R +FD+M ++ W+ +I GY +N L E +NLF EM
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 213 NVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMA 272
+VEP+ S AC GNLS D V Q+
Sbjct: 368 HVEPNHFTFSSAFKAC---GNLS----------DPRVGKQVLGQA--------------- 399
Query: 273 KGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQ 332
F + L N V+ +++S + ++ ++EDA+ F+ + EK+L+ ++ + G N + +
Sbjct: 400 ---FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 333 EALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAII 392
+A KL +E+ + T S++S A++G + + ++IH + K + V NA+I
Sbjct: 457 QAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALI 516
Query: 393 DMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGV 452
MY+KCGS+++A VF M RNVISWTSMI FA HG A L FN+M +E + PN V
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEV 576
Query: 453 TFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVET 512
T++ +L ACSH GLV EG F SM ++ I PK EHY CMVDL RA LL +A E + T
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 513 MPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDV 572
MPF +V++W + + ACRVH EL + AA+++L+LDP+ A + LSNIYA +W++
Sbjct: 637 MPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEES 696
Query: 573 GELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYV 632
E+R+ MKER ++KE CS IE+ +++++F D +H QIY++L+ +I+E+K GYV
Sbjct: 697 TEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYV 756
Query: 633 PD----IHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNF 688
PD +H + ++ EK ++ HSEK+A+ +GLIS+ K +R+ KNLRVC DCHN
Sbjct: 757 PDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNA 816
Query: 689 IKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+K +S V REIV+RD RFHH+KDG CSC DYW
Sbjct: 817 MKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 208/458 (45%), Gaps = 51/458 (11%)
Query: 92 ISWSH---------RPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGL 142
+SWS R A+KVF++ L GL + + + +++A + ++ + G G
Sbjct: 132 VSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGF 191
Query: 143 GTKLG-FGSDPFVQTGLVGMY-GACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFD 200
K G F SD V L+ M+ +A +FDKMS ++V W++MI Q G
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 201 EVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLI 260
E + F +M +S E D+ LS + SAC+ NLS G+ +H + I + + D ++ +L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLV 309
Query: 261 TMYANC---GCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLIC 317
MYA C G +D + +FD+ M + ++
Sbjct: 310 DMYAKCSADGSVDDCRKVFDR-------------------------------MEDHSVMS 338
Query: 318 WSAMISGYAEN-NHPQEALKLFNEMQVCG-MKPDKVTMLSVISACAHLGVLDQAQRIHLY 375
W+A+I+GY +N N EA+ LF+EM G ++P+ T S AC +L +++
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 376 IDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNA 435
K + V N++I M+ K +E A+ FE + +N++S+ + ++ + + A
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 436 LIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVD 495
+++ + + + TF +L ++ G + +G +I + + + + ++
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALIS 517
Query: 496 LFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHG 533
++ + + A + M NV+ W S++ HG
Sbjct: 518 MYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHG 554
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 222/491 (45%), Gaps = 52/491 (10%)
Query: 52 LLLTSFSLPTTTPSSLYYALSIFSQIPAPPSR--VSNKFIRAISWSHRPKHALKVFLKML 109
+ + SFS P+ L I SQ P+ +R V+++ I + + A+ M
Sbjct: 1 MAMISFSFPSPAK------LPIKSQ-PSVSNRINVADRLILRHLNAGDLRGAVSALDLMA 53
Query: 110 NEGLT-IDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKI 168
+G+ +D +F +LK+ RA G VH + D + L+ +Y G
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 169 LDARLMFDKM---SYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKIL 225
A +F+ M RD+V WS M+ Y NG + + +F E + P++ + ++
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 226 SACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLV 285
ACS + + G F++ H +S + C +DM
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKT-----GHFESDVCV---GCSLIDM-------------- 211
Query: 286 VSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCG 345
V G E+A +FD+M E +++ W+ MI+ + P+EA++ F +M + G
Sbjct: 212 ----FVKG---ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 346 MKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKC---GSLE 402
+ DK T+ SV SACA L L +++H + ++ D V +++DMYAKC GS++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 403 SAREVFERMRRRNVISWTSMINAFAIHGD-ARNALIFFNKMKDES-IDPNGVTFIGVLYA 460
R+VF+RM +V+SWT++I + + + A A+ F++M + ++PN TF A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 461 CSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVV 520
C + G+++ + ++ +F +++ + +A E++ N+V
Sbjct: 383 CGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLV 440
Query: 521 IWGSLM-AACR 530
+ + + CR
Sbjct: 441 SYNTFLDGTCR 451
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 29/292 (9%)
Query: 345 GMKP-DKVTMLSVISACAH-----LGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKC 398
G++P D VT S++ +C LG L A+ I I+ ++ + N++I +Y+K
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-----LYNSLISLYSKS 110
Query: 399 GSLESAREVFERMRR---RNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFI 455
G A +VFE MRR R+V+SW++M+ + +G +A+ F + + + PN +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 456 GVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGC-MVDLFGRA-NLLREALELVETM 513
V+ ACS++ V GR + + GC ++D+F + N A ++ + M
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 514 PFAPNVVIWGSLMAACRVHG-EIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDV 572
NVV W ++ C G E F +L + LS++++ +++
Sbjct: 230 S-ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS---GFESDKFTLSSVFSACAELENL 285
Query: 573 G---ELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNE 621
+L G++ + CS ++M Y +AD S ++++++ +
Sbjct: 286 SLGKQLHSWAIRSGLVDDVECSLVDM----YAKCSADGSVDDCRKVFDRMED 333
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/606 (39%), Positives = 366/606 (60%), Gaps = 39/606 (6%)
Query: 122 PILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQT--GLVGMYGACGKILDARLMFDKMS 179
PIL I++ L E MQ+ K FV + AR +F+ MS
Sbjct: 32 PIL-LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 180 YRDIVPWSVMIDGY--FQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYG 237
DIV ++ M GY F N L EV +LF E+ + PD +L AC+ A L G
Sbjct: 91 EPDIVIFNSMARGYSRFTNPL--EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 238 EAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRA 297
+H C+ M GL D N+ V +++ Y+
Sbjct: 149 RQLH--------------------------CLSMKLGLDD-----NVYVCPTLINMYTEC 177
Query: 298 GQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVI 357
V+ AR +FD++VE ++C++AMI+GYA N P EAL LF EMQ +KP+++T+LSV+
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 358 SACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVI 417
S+CA LG LD + IH Y K++F ++VN A+IDM+AKCGSL+ A +FE+MR ++
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ 297
Query: 418 SWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASM 477
+W++MI A+A HG A +++ F +M+ E++ P+ +TF+G+L ACSH G V+EGR+ F+ M
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 478 TNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIEL 537
+++ I P +HYG MVDL RA L +A E ++ +P +P ++W L+AAC H ++L
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 417
Query: 538 AEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNN 597
AE ++++ +LD H G V+LSN+YA++K+W+ V LRK MK+R +K CS IE+NN
Sbjct: 418 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Query: 598 EVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSAL-VDLEDEEKREVILWHSE 656
V+EF + D T +++ L+E++ ELK +GYVPD + ++ D+EK + +HSE
Sbjct: 478 VVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSE 537
Query: 657 KLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVC 716
KLA+ +GL+++ + IR+VKNLRVC DCHN KL+S ++ R++V+RD RFHH++DG C
Sbjct: 538 KLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKC 597
Query: 717 SCKDYW 722
SC D+W
Sbjct: 598 SCGDFW 603
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 212/413 (51%), Gaps = 40/413 (9%)
Query: 3 TLSQPTKPLTLPTSTAI---SSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSL 59
T ++ +K T+ T I S C+SL + Q A +K SH S + KL+ +F
Sbjct: 17 TFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIK---SHIEDVSFVAKLI--NFCT 71
Query: 60 PTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFS 119
+ T SS+ YA +F + P + N R S P +F+++L +G+ D ++
Sbjct: 72 ESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYT 131
Query: 120 FPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMS 179
FP +LKA A A+ L EG Q+H L KLG + +V L+ MY C + AR +FD++
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 180 YRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEA 239
+V ++ MI GY + +E L+LF EM+ ++P+E+ L +LS+C+ G+L G+
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 240 VHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQ 299
+H++ ++ + + LI M+A CG +D A +F+K+ K+ +AM+ Y+ G+
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 300 VEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISA 359
E + L+F++M +EN ++PD++T L +++A
Sbjct: 312 AEKSMLMFERM--------------RSEN-----------------VQPDEITFLGLLNA 340
Query: 360 CAHLGVLDQAQR-IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERM 411
C+H G +++ ++ + K ++ +++D+ ++ G+LE A E +++
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/565 (40%), Positives = 349/565 (61%), Gaps = 8/565 (1%)
Query: 158 LVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPD 217
L+G + KI++AR FD M+ RD+V W+ +I GY Q+G DE LF+E + +V
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 218 EMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFD 277
++S + N EA F D + + ++ Y M+MAK LFD
Sbjct: 285 TAMVSGYIQ------NRMVEEARELF--DKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 278 KVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKL 337
+ +N+ M++GY++ G++ +A+ +FD+M ++D + W+AMI+GY+++ H EAL+L
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 338 FNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAK 397
F +M+ G + ++ + S +S CA + L+ +++H + K + V NA++ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 398 CGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGV 457
CGS+E A ++F+ M ++++SW +MI ++ HG AL FF MK E + P+ T + V
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 458 LYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAP 517
L ACSH GLVD+GR+ F +MT +Y + P +HY CMVDL GRA LL +A L++ MPF P
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 518 NVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRK 577
+ IWG+L+ A RVHG ELAE AA ++ ++P++ G VLLSN+YA RW DVG+LR
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 578 SMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHS 637
M+++G+ K S IE+ N+ + F D H + D+I+ L E+ +K AGYV
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSV 696
Query: 638 ALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYA 697
L D+E+EEK ++ +HSE+LA+ YG++ IR++KNLRVCEDCHN IK ++++
Sbjct: 697 VLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITG 756
Query: 698 REIVIRDRTRFHHYKDGVCSCKDYW 722
R I++RD RFHH+KDG CSC DYW
Sbjct: 757 RLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 80/465 (17%)
Query: 159 VGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDE 218
+ Y G+ +A +F +M V ++ MI GY +NG F+ LF+EM E D
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDL 126
Query: 219 MVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDK 278
+ + ++ R NL + E + + +V +T+++ YA GC+D A+ +FD+
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVC----SWNTMLSGYAQNGCVDDARSVFDR 182
Query: 279 VLLKNLVVSTAMVSGYSRAGQVE-------------------------------DARLIF 307
+ KN V A++S Y + ++E +AR F
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 308 DQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKP------------------- 348
D M +D++ W+ +I+GYA++ EA +LF+E V +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 349 --DKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFG----GDLRVNNAIIDMYAKCGSLE 402
DK+ + +S A L Q +R+ + K F ++ N +I YA+CG +
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQGERMEM--AKELFDVMPCRNVSTWNTMITGYAQCGKIS 360
Query: 403 SAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACS 462
A+ +F++M +R+ +SW +MI ++ G + AL F +M+ E N +F L C+
Sbjct: 361 EAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 463 HAGLVDEGREIFASMTNEYNIPPKYEHYGCMVD-----LFGRANLLREALELVETMPFAP 517
++ G+++ + + YE GC V ++ + + EA +L + M
Sbjct: 421 DVVALELGKQLHGRL-----VKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEMA-GK 473
Query: 518 NVVIWGSLMAACRVH--GEIELAEFAAKQLLQLDPDHDGALVLLS 560
++V W +++A H GE+ L F + + L PD + +LS
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 123/290 (42%), Gaps = 33/290 (11%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIAR 129
A ++F ++P I S S AL++F++M EG ++R SF L A
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 130 AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVM 189
L G Q+HG K G+ + FV L+ MY CG I +A +F +M+ +DIV W+ M
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 190 IDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNV 249
I GY ++G + L FE MK ++PD+ + +LSACS G + G
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG------------ 529
Query: 250 ALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQ 309
+ TM + G M N MV RAG +EDA +
Sbjct: 530 ------RQYFYTMTQDYGVM------------PNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 310 M-VEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVIS 358
M E D W ++ A H L ++ M+P+ M ++S
Sbjct: 572 MPFEPDAAIWGTLLG--ASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 166/354 (46%), Gaps = 40/354 (11%)
Query: 182 DIVPWSVMIDGYFQNGLFDEVLNLFEEM-KMSNVEPDEMVLSKILSACSRAGNLSYGE-A 239
DI W+V I Y + G +E L +F+ M + S+V + M+ +G L GE
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI----------SGYLRNGEFE 112
Query: 240 VHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQ 299
+ + D D + +I Y + A+ LF+ + +++ M+SGY++ G
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 300 VEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISA 359
V+DAR +FD+M EK+ + W+A++S Y +N+ +EA LF + +++S
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE----------NWALVSW 222
Query: 360 CAHLGVLDQAQRIHLYIDKNAFGGDLRVN-----NAIIDMYAKCGSLESAREVFERMRRR 414
LG + ++I ++ F + V N II YA+ G ++ AR++F+ +
Sbjct: 223 NCLLGGFVKKKKI---VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 415 NVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIF 474
+V +WT+M++ + + A F+KM + N V++ +L ++ +E+F
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF 335
Query: 475 ASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAA 528
M N+ + M+ + + + EA L + MP + V W +++A
Sbjct: 336 DVMPCR-NVST----WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 135/300 (45%), Gaps = 30/300 (10%)
Query: 312 EKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQR 371
+ D+ W+ IS Y EAL++F M + V+ +IS G + A++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARK 116
Query: 372 IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGD 431
+ + + DL N +I Y + +L ARE+FE M R+V SW +M++ +A +G
Sbjct: 117 LFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 432 ARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYG 491
+A F++M ++ N V++ +L A ++E +F S N + +
Sbjct: 173 VDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----WN 223
Query: 492 CMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPD 551
C++ F + + EA + ++M +VV W +++ G+I+ A+QL P
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQSGKID----EARQLFDESPV 278
Query: 552 HD-GALVLLSNIYAKDKRWQDVGELRKSMKERGILKERAC-------SRIEMNNEVYEFL 603
D + + Y +++ ++ EL M ER + A R+EM E+++ +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/653 (36%), Positives = 373/653 (57%), Gaps = 32/653 (4%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIAR 129
A +F ++P N + S + + AL++ M E L + +L A++
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 130 AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVM 189
+ G ++HG + GF S + T LV MY CG + AR +FD M R++V W+ M
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 190 IDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNV 249
ID Y QN E + +F++M V+P ++ + L AC+ G+L G +H+ ++ +
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE--L 366
Query: 250 ALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQ 309
LD +N+ V +++S Y + +V+ A +F +
Sbjct: 367 GLD-----------------------------RNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 310 MVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQA 369
+ + L+ W+AMI G+A+N P +AL F++M+ +KPD T +SVI+A A L + A
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 370 QRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIH 429
+ IH + ++ ++ V A++DMYAKCG++ AR +F+ M R+V +W +MI+ + H
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTH 517
Query: 430 GDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEH 489
G + AL F +M+ +I PNGVTF+ V+ ACSH+GLV+ G + F M Y+I +H
Sbjct: 518 GFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH 577
Query: 490 YGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLD 549
YG MVDL GRA L EA + + MP P V ++G+++ AC++H + AE AA++L +L+
Sbjct: 578 YGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 637
Query: 550 PDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSH 609
PD G VLL+NIY W+ VG++R SM +G+ K CS +E+ NEV+ F + +H
Sbjct: 638 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 697
Query: 610 KQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKK 669
+ +IY L ++I +K AGYVPD + L +E++ K +++ HSEKLA+ +GL+++
Sbjct: 698 PDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTA 756
Query: 670 DSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ I + KNLRVC DCHN K +S V REIV+RD RFHH+K+G CSC DYW
Sbjct: 757 GTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/596 (25%), Positives = 271/596 (45%), Gaps = 90/596 (15%)
Query: 7 PTKPLTLPTSTAISSCSSLTHMKQTHAQILK--LSHSHHSQNSLLLKLLLTSFSLPTTTP 64
P P + + CSSL ++Q + K L H Q L+ L +
Sbjct: 32 PANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVS--LFCRYG------ 83
Query: 65 SSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPIL 124
S+ A +F I + + + + ++ + AL+ F++M + + ++F +L
Sbjct: 84 -SVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 125 KAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIV 184
K L G ++HGL K GF D F TGL MY C ++ +AR +FD+M RD+V
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV 202
Query: 185 PWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFI 244
W+ ++ GY QNG+ L + + M N++P + + +L A S +S G+ +H +
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 245 IDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDAR 304
+ + ++ + L+ MYA CG ++ A+ LFD +L +N+V +M+ Y
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY---------- 312
Query: 305 LIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLG 364
+N +P+EA+ +F +M G+KP V+++ + ACA LG
Sbjct: 313 ---------------------VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 365 VLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMIN 424
L++ + IH + ++ V N++I MY KC +++A +F +++ R ++SW +MI
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 425 AFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACS------HA-------------- 464
FA +G +AL +F++M+ ++ P+ T++ V+ A + HA
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 465 ------GLVDE---------GREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALEL 509
LVD R IF M+ + + M+D +G + ALEL
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERH-----VTTWNAMIDGYGTHGFGKAALEL 526
Query: 510 VETM---PFAPNVVIWGSLMAACRVHGEIELA-----EFAAKQLLQLDPDHDGALV 557
E M PN V + S+++AC G +E ++L DH GA+V
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 201/409 (49%), Gaps = 51/409 (12%)
Query: 65 SSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPIL 124
SS S QIP PPSR HR FL N + + + P L
Sbjct: 2 SSQLVQFSTVPQIPNPPSR------------HRH------FLSERNY-IPANVYEHPAAL 42
Query: 125 KAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIV 184
+ R L E Q+ L K G + F QT LV ++ G + +A +F+ + + V
Sbjct: 43 -LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 185 PWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFI 244
+ M+ G+ + D+ L F M+ +VEP + +L C L G+ +H +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 245 IDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDAR 304
+ + +LD + L MYA C QV +AR
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCR-------------------------------QVNEAR 190
Query: 305 LIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLG 364
+FD+M E+DL+ W+ +++GY++N + AL++ M +KP +T++SV+ A + L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 365 VLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMIN 424
++ + IH Y ++ F + ++ A++DMYAKCGSLE+AR++F+ M RNV+SW SMI+
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 425 AFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREI 473
A+ + + + A++ F KM DE + P V+ +G L+AC+ G ++ GR I
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/626 (39%), Positives = 364/626 (58%), Gaps = 38/626 (6%)
Query: 100 HALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLV 159
AL +F M + + SF ++K A + L Q+H K GF D ++T L+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 160 GMYGACGKILDARLMFDKMS-YRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDE 218
Y C +LDA +F ++ ++V W+ MI G+ QN +E ++LF EMK V P+E
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 219 MVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDK 278
S IL+A +S E VH ++ N
Sbjct: 398 FTYSVILTALPV---ISPSE-VHAQVVKTNYE---------------------------- 425
Query: 279 VLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLF 338
++ V TA++ Y + G+VE+A +F + +KD++ WSAM++GYA+ + A+K+F
Sbjct: 426 ---RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 339 NEMQVCGMKPDKVTMLSVISACAHLGV-LDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAK 397
E+ G+KP++ T S+++ CA + Q ++ H + K+ L V++A++ MYAK
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 398 CGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGV 457
G++ESA EVF+R R ++++SW SMI+ +A HG A AL F +MK + +GVTFIGV
Sbjct: 543 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 602
Query: 458 LYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAP 517
AC+HAGLV+EG + F M + I P EH CMVDL+ RA L +A++++E MP
Sbjct: 603 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 518 NVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRK 577
IW +++AACRVH + EL AA++++ + P+ A VLLSN+YA+ WQ+ ++RK
Sbjct: 663 GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRK 722
Query: 578 SMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHS 637
M ER + KE S IE+ N+ Y FL DRSH DQIY KL ++ + LK GY PD
Sbjct: 723 LMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 782
Query: 638 ALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYA 697
L D++DE K V+ HSE+LA+ +GLI++ K S + I+KNLRVC DCH IKL++K+
Sbjct: 783 VLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEE 842
Query: 698 REIVIRDRTRFHHY-KDGVCSCKDYW 722
REIV+RD RFHH+ DGVCSC D+W
Sbjct: 843 REIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 218/487 (44%), Gaps = 46/487 (9%)
Query: 57 FSLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTID 116
+ T + S LY A ++F + P + S R + A ++FL + G+ +D
Sbjct: 33 YCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMD 92
Query: 117 RFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFD 176
F +LK A L G Q+H K GF D V T LV Y D R +FD
Sbjct: 93 CSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 177 KMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSY 236
+M R++V W+ +I GY +N + DEVL LF M+ +P+ + L + G
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 237 GEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSR 296
G VH ++ N + + ++LI +Y CG + A+ LFDK +K++V +M+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI----- 267
Query: 297 AGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSV 356
SGYA N EAL +F M++ ++ + + SV
Sbjct: 268 --------------------------SGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 357 ISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMR-RRN 415
I CA+L L +++H + K F D + A++ Y+KC ++ A +F+ + N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 416 VISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFA 475
V+SWT+MI+ F + A+ F++MK + + PN T+ +L A V E+ A
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHA 417
Query: 476 SMTNEYNIPPKYEHYG----CMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRV 531
+ + YE ++D + + + EA ++ + ++V W +++A
Sbjct: 418 QV-----VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQ 471
Query: 532 HGEIELA 538
GE E A
Sbjct: 472 TGETEAA 478
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/652 (35%), Positives = 375/652 (57%), Gaps = 37/652 (5%)
Query: 73 IFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGL-TIDRFSFPPILKAIARAE 131
+F ++P N I S K AL L+ GL +D + +L A A
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAG 261
Query: 132 GLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMID 191
G+ +H K G S+ FV L+ +Y G++ D + +FD+M RD++ W+ +I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 192 GYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVAL 251
Y N ++LF+EM++S ++PD + L + S S+ G++ +V F
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT------- 374
Query: 252 DAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMV 311
+ KG F L+++ + A+V Y++ G V+ AR +F+ +
Sbjct: 375 -------------------LRKGWF----LEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 312 EKDLICWSAMISGYAENNHPQEALKLFNEMQVCG-MKPDKVTMLSVISACAHLGVLDQAQ 370
D+I W+ +ISGYA+N EA++++N M+ G + ++ T +SV+ AC+ G L Q
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 371 RIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHG 430
++H + KN D+ V ++ DMY KCG LE A +F ++ R N + W ++I HG
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 431 DARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHY 490
A++ F +M DE + P+ +TF+ +L ACSH+GLVDEG+ F M +Y I P +HY
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 491 GCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDP 550
GCMVD++GRA L AL+ +++M P+ IWG+L++ACRVHG ++L + A++ L +++P
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Query: 551 DHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHK 610
+H G VLLSN+YA +W+ V E+R +G+ K S +E++N+V F T +++H
Sbjct: 652 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHP 711
Query: 611 QTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKD 670
+++Y +L + ++LK GYVPD L D+ED+EK +++ HSE+LA+ + LI++
Sbjct: 712 MYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAK 771
Query: 671 SCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ IRI KNLRVC DCH+ K +SK+ REI++RD RFHH+K+GVCSC DYW
Sbjct: 772 TTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 234/459 (50%), Gaps = 44/459 (9%)
Query: 106 LKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGAC 165
L ML+ GLT D +FP +LKA +++G ++H L K GF D +V L+ +Y
Sbjct: 142 LFMLSSGLTPDYRTFPSVLKA---CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 166 GKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKIL 225
+ +AR++FD+M RD+ W+ MI GY Q+G E L L ++ D + + +L
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLL 254
Query: 226 SACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLV 285
SAC+ AG+ + G +H + I + + + + + LI +YA G + + +FD+
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR------- 307
Query: 286 VSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCG 345
M +DLI W+++I Y N P A+ LF EM++
Sbjct: 308 ------------------------MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 346 MKPDKVTMLSVISACAHLGVLDQAQRIHLY-IDKNAFGGDLRVNNAIIDMYAKCGSLESA 404
++PD +T++S+ S + LG + + + + + K F D+ + NA++ MYAK G ++SA
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 405 REVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDES-IDPNGVTFIGVLYACSH 463
R VF + +VISW ++I+ +A +G A A+ +N M++E I N T++ VL ACS
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 464 AGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWG 523
AG + +G ++ + + + D++G+ L +AL L +P N V W
Sbjct: 464 AGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-NSVPWN 521
Query: 524 SLMAACRVHGEIELAEFAAKQLLQ--LDPDHDGALVLLS 560
+L+A HG E A K++L + PDH + LLS
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 156/298 (52%), Gaps = 16/298 (5%)
Query: 261 TMYANCGCMDMAKGLFDKVL----LKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLI 316
T++ C + AK L +++ ++N+ +S +V+ Y G V AR FD + +D+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 317 CWSAMISGYAENNHPQEALKLFNE-MQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLY 375
W+ MISGY + E ++ F+ M G+ PD T SV+ AC V+D +IH
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVID-GNKIHCL 175
Query: 376 IDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNA 435
K F D+ V ++I +Y++ ++ +AR +F+ M R++ SW +MI+ + G+A+ A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 436 LIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVD 495
L N ++ ++D VT + +L AC+ AG + G I S + ++ + + ++D
Sbjct: 236 LTLSNGLR--AMDS--VTVVSLLSACTEAGDFNRGVTIH-SYSIKHGLESELFVSNKLID 290
Query: 496 LFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEI--ELAEFAAKQLLQLDPD 551
L+ LR+ ++ + M + +++ W S++ A ++ + ++ F +L ++ PD
Sbjct: 291 LYAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 173/444 (38%), Gaps = 110/444 (24%)
Query: 233 NLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVS 292
NL + +H ++ + + + + L+ +Y G + +A+ FD + +++ M+S
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 293 GYSRAGQ---------------------------VEDARLIFDQ-----MVEKDLICW-- 318
GY RAG ++ R + D + K W
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDV 185
Query: 319 ---SAMISGYAENNHPQEALKLFNEMQVCGMKP--------------------------- 348
+++I Y+ A LF+EM V M
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 349 DKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVF 408
D VT++S++SAC G ++ IH Y K+ +L V+N +ID+YA+ G L ++VF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 409 ERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFI---------GVLY 459
+RM R++ISW S+I A+ ++ A+ F +M+ I P+ +T I G +
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 460 AC---------------------------SHAGLVDEGREIFASMTNEYNIPPKYEHYGC 492
AC + GLVD R +F + N I +
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS-----WNT 420
Query: 493 MVDLFGRANLLREALELVETM----PFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQL 548
++ + + EA+E+ M A N W S++ AC G + +LL+
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 549 DPDHDGALVL-LSNIYAKDKRWQD 571
D +V L+++Y K R +D
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLED 504
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/559 (40%), Positives = 345/559 (61%), Gaps = 3/559 (0%)
Query: 167 KILD-ARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMS--NVEPDEMVLSK 223
K LD A + D+ + + MI + ++ + ++ + + + S +++PD ++
Sbjct: 54 KYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNF 113
Query: 224 ILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKN 283
++ AC+ G VH I D H+Q+ LI++YA GC+D +F+ + +
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 284 LVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQV 343
V TAMV+ +R G V AR +F+ M E+D I W+AMISGYA+ +EAL +F+ MQ+
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 344 CGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLES 403
G+K + V M+SV+SAC LG LDQ + H YI++N +R+ ++D+YAKCG +E
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 404 AREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSH 463
A EVF M +NV +W+S +N A++G L F+ MK + + PN VTF+ VL CS
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 464 AGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWG 523
G VDEG+ F SM NE+ I P+ EHYGC+VDL+ RA L +A+ +++ MP P+ +W
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 524 SLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERG 583
SL+ A R++ +EL A+K++L+L+ + GA VLLSNIYA W +V +R+SMK +G
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 584 ILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLE 643
+ K+ CS +E+N EV+EF D+SH + QI ++ L+ AGY D + D++
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Query: 644 DEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIR 703
+EEK + + HSEK A+ +G++S K+D IRIVKNLRVC DCH ++SK++ REI++R
Sbjct: 534 EEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVR 593
Query: 704 DRTRFHHYKDGVCSCKDYW 722
DR RFHH+KDG CSC +W
Sbjct: 594 DRNRFHHFKDGHCSCNGFW 612
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 205/434 (47%), Gaps = 69/434 (15%)
Query: 67 LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEG--LTIDRFSFPPIL 124
L YA I + P N IRA S P+ + + ++L+ G L D ++ ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 125 KAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGA-------------------- 164
+A G+QVHG+ + GF +DP VQTGL+ +Y
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 165 -----------CGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSN 213
CG ++ AR +F+ M RD + W+ MI GY Q G E LN+F M++
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 214 VEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAK 273
V+ + + + +LSAC++ G L G H +I N + + L +TL+ +YA CG M
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM---- 291
Query: 274 GLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQE 333
E A +F M EK++ WS+ ++G A N ++
Sbjct: 292 ---------------------------EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEK 324
Query: 334 ALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNN--AI 391
L+LF+ M+ G+ P+ VT +SV+ C+ +G +D+ QR H +N FG + ++ + +
Sbjct: 325 CLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCL 383
Query: 392 IDMYAKCGSLESAREVFERM-RRRNVISWTSMINAFAIHGDARNALIFFNKMKD-ESIDP 449
+D+YA+ G LE A + ++M + + W+S+++A ++ + ++ KM + E+ +
Sbjct: 384 VDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANH 443
Query: 450 NGVTFIGVLYACSH 463
+ +YA S+
Sbjct: 444 GAYVLLSNIYADSN 457
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 360/591 (60%), Gaps = 6/591 (1%)
Query: 138 QVHGLGTKLGFGSDPFVQTGLVGMYGACGKILD--ARLMFDKMSYRDIVPWSVMIDGYFQ 195
Q+HG + G ++ T L+ G +D AR + + + +R+ W+ +I GY
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 196 NGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHL 255
G FDE + ++ M+ + P S +L AC +L+ G H ++
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 256 QSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDL 315
+T+I MY C +D A+ +FD++ ++++ T +++ Y+R G +E A +F+ + KD+
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 316 ICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLY 375
+ W+AM++G+A+N PQEAL+ F+ M+ G++ D+VT+ ISACA LG A R
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 376 IDKNAFGGD--LRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDAR 433
K+ + + + +A+IDMY+KCG++E A VF M +NV +++SMI A HG A+
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 434 NALIFFNKMKDES-IDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGC 492
AL F+ M ++ I PN VTF+G L ACSH+GLVD+GR++F SM + + P +HY C
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 493 MVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDH 552
MVDL GR L+EALEL++TM P+ +WG+L+ ACR+H E+AE AA+ L +L+PD
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 553 DGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACS-RIEMNNEVYEFLTADRSHKQ 611
G +LLSN+YA W V +RK +KE+G+ K A S ++ N ++++F + +H
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPM 546
Query: 612 TDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDS 671
+++I +KL E++ L GY PD+ S D+ D KR +++ H+EKLAL + L+++ +DS
Sbjct: 547 SNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDS 606
Query: 672 CIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
I I+KNLR+C DCH F++L S+V + I++RD RFHH++ G CSC D+W
Sbjct: 607 TITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 199/480 (41%), Gaps = 87/480 (18%)
Query: 3 TLSQPTKPLTLPTSTAISS---CSSLTHMKQTHAQILK--LSHSHHSQNSLLLKLL--LT 55
T S+ + L S+ IS C +L +KQ H +L+ L S + +L KL+ LT
Sbjct: 37 TFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCY----ILTKLIRTLT 92
Query: 56 SFSLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTI 115
+P YA + + + IR + + A+ ++ M E +T
Sbjct: 93 KLGVPMDP-----YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITP 147
Query: 116 DRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMF 175
F+F +LKA + L G Q H +L +V ++ MY C I AR +F
Sbjct: 148 VSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVF 207
Query: 176 DKMSYRDI-------------------------------VPWSVMIDGYFQNGLFDEVLN 204
D+M RD+ V W+ M+ G+ QN E L
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 205 LFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAH--LQSTLITM 262
F+ M+ S + DE+ ++ +SAC++ G Y + + + + H + S LI M
Sbjct: 268 YFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 327
Query: 263 YANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMI 322
Y+ CG ++ A +F + KN+ ++M+ G + G+ ++A +F MV + I
Sbjct: 328 YSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEI------ 381
Query: 323 SGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRI--HLYIDKNA 380
KP+ VT + + AC+H G++DQ +++ +Y
Sbjct: 382 ------------------------KPNTVTFVGALMACSHSGLVDQGRQVFDSMY---QT 414
Query: 381 FGGDLRVNN--AIIDMYAKCGSLESAREVFERMR-RRNVISWTSMINAFAIHGDARNALI 437
FG ++ ++D+ + G L+ A E+ + M + W +++ A IH + A I
Sbjct: 415 FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEI 474
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/739 (34%), Positives = 404/739 (54%), Gaps = 59/739 (7%)
Query: 4 LSQPTKPLTLPTSTAISSCSSL------THMKQTHAQILKLSHSHHSQNSLLLKLLLTSF 57
L + +P + + +++CS+L KQ HA L+ NS ++ L+ +
Sbjct: 191 LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR----KGELNSFIINTLVAMY 246
Query: 58 SLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDR 117
SS + N + ++ + + AL+ +M+ EG+ D
Sbjct: 247 GKLGKLASSKV----LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 118 FSFPPILKAIARAEGLLEGMQVHGLGTKLG-FGSDPFVQTGLVGMYGACGKILDARLMFD 176
F+ +L A + E L G ++H K G + FV + LV MY C ++L R +FD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 177 KMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMS-NVEPDEMVLSKILSACSRAGNLS 235
M R I W+ MI GY QN E L LF M+ S + + ++ ++ AC R+G S
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 236 YGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYS 295
EA+H F++ + D +Q+TL MDM YS
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTL---------MDM----------------------YS 451
Query: 296 RAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQ-----------VC 344
R G+++ A IF +M ++DL+ W+ MI+GY + H ++AL L ++MQ
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 345 GMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESA 404
+KP+ +T+++++ +CA L L + + IH Y KN D+ V +A++DMYAKCG L+ +
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 405 REVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHA 464
R+VF+++ ++NVI+W +I A+ +HG+ + A+ M + + PN VTFI V ACSH+
Sbjct: 572 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 631
Query: 465 GLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVV-IWG 523
G+VDEG IF M +Y + P +HY C+VDL GRA ++EA +L+ MP N W
Sbjct: 632 GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS 691
Query: 524 SLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERG 583
SL+ A R+H +E+ E AA+ L+QL+P+ VLL+NIY+ W E+R++MKE+G
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 584 ILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLE 643
+ KE CS IE +EV++F+ D SH Q++++ L + ++ GYVPD L ++E
Sbjct: 752 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVE 811
Query: 644 DEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIR 703
++EK ++ HSEKLA+ +G++++ + IR+ KNLRVC DCH K +SK+ REI++R
Sbjct: 812 EDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILR 871
Query: 704 DRTRFHHYKDGVCSCKDYW 722
D RFH +K+G CSC DYW
Sbjct: 872 DVRRFHRFKNGTCSCGDYW 890
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 211/445 (47%), Gaps = 56/445 (12%)
Query: 33 AQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIF-SQIPAPPSRVSNKFIRA 91
+Q+L S H LL+ TS + S++ A SIF SQ +P + +R+
Sbjct: 19 SQLLPFSRHKHP---YLLRATPTSAT--EDVASAVSGAPSIFISQSRSPEWWID--LLRS 71
Query: 92 ISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSD 151
S+ + A+ ++ M+ G+ D ++FP +LKA+A + + G Q+H K G+G D
Sbjct: 72 KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 131
Query: 152 PF-VQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMK 210
V LV +Y CG +FD++S R+ V W+ +I ++ L F M
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 211 MSNVEPDEMVLSKILSACSR---AGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCG 267
NVEP L +++ACS L G+ VH +
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY------------------------ 227
Query: 268 CMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAE 327
+ KG + ++ LV AM Y + G++ ++++ +DL+ W+ ++S +
Sbjct: 228 --GLRKGELNSFIINTLV---AM---YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 328 NNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLY------IDKNAF 381
N EAL+ EM + G++PD+ T+ SV+ AC+HL +L + +H Y +D+N+F
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 382 GGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNK 441
V +A++DMY C + S R VF+ M R + W +MI ++ + + AL+ F
Sbjct: 340 -----VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 442 MKDES-IDPNGVTFIGVLYACSHAG 465
M++ + + N T GV+ AC +G
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSG 419
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/348 (19%), Positives = 154/348 (44%), Gaps = 39/348 (11%)
Query: 186 WSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFII 245
W ++ ++ L E + + +M + ++PD +L A + ++ G+ +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 246 DNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARL 305
+D+ + V+ +V+ Y + G
Sbjct: 125 KFGYGVDS------------------------------VTVANTLVNLYRKCGDFGAVYK 154
Query: 306 IFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGV 365
+FD++ E++ + W+++IS + AL+ F M ++P T++SV++AC++L +
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
Query: 366 ---LDQAQRIHLYIDKNAFGGDLR--VNNAIIDMYAKCGSLESAREVFERMRRRNVISWT 420
L +++H Y + G+L + N ++ MY K G L S++ + R++++W
Sbjct: 215 PEGLMMGKQVHAYGLRK---GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 421 SMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNE 480
+++++ + AL + +M E ++P+ T VL ACSH ++ G+E+ A
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 481 YNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAA 528
++ +VD++ + + + M F + +W +++A
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 127/245 (51%), Gaps = 19/245 (7%)
Query: 318 WSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYID 377
W ++ +N +EA+ + +M V G+KPD +++ A A L ++ ++IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 378 KNAFGGD-LRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNAL 436
K +G D + V N ++++Y KCG + +VF+R+ RN +SW S+I++ AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 437 IFFNKMKDESIDPNGVTFIGVLYACSHAGLVDE---GREIFA-----SMTNEYNIPPKYE 488
F M DE+++P+ T + V+ ACS+ + + G+++ A N + I
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII----- 239
Query: 489 HYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAA-CRVHGEIELAEFAAKQLLQ 547
+V ++G+ L + L+ + ++V W +++++ C+ +E E+ + +L+
Sbjct: 240 --NTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 548 -LDPD 551
++PD
Sbjct: 297 GVEPD 301
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/645 (37%), Positives = 373/645 (57%), Gaps = 6/645 (0%)
Query: 1 MSTLSQPTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLP 60
MST+++ + + C + KQ H+Q + + N K L +
Sbjct: 23 MSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVA---PNPTFQKKLFVFWC-- 77
Query: 61 TTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSF 120
+ + YA +F +IP P V N I+ S ++++L ML EG+T D +F
Sbjct: 78 SRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTF 137
Query: 121 PPILKAIARAEGLLE-GMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMS 179
P +L + R G L G ++H K G GS+ +VQ LV MY CG + AR +FD+
Sbjct: 138 PFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRC 197
Query: 180 YRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEA 239
D+ W++MI GY + ++E + L EM+ + V P + L +LSACS+ + +
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 240 VHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQ 299
VHE++ + L++ L+ YA CG MD+A +F + ++++ T++V GY G
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 300 VEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISA 359
++ AR FDQM +D I W+ MI GY E+L++F EMQ GM PD+ TM+SV++A
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Query: 360 CAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISW 419
CAHLG L+ + I YIDKN D+ V NA+IDMY KCG E A++VF M +R+ +W
Sbjct: 378 CAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTW 437
Query: 420 TSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTN 479
T+M+ A +G + A+ F +M+D SI P+ +T++GVL AC+H+G+VD+ R+ FA M +
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS 497
Query: 480 EYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAE 539
++ I P HYGCMVD+ GRA L++EA E++ MP PN ++WG+L+ A R+H + +AE
Sbjct: 498 DHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAE 557
Query: 540 FAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEV 599
AAK++L+L+PD+ LL NIYA KRW+D+ E+R+ + + I K S IE+N
Sbjct: 558 LAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFA 617
Query: 600 YEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLED 644
+EF+ D+SH Q+++IY KL E+ E A Y+PD L + D
Sbjct: 618 HEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/607 (39%), Positives = 376/607 (61%), Gaps = 19/607 (3%)
Query: 122 PILKAIARA--EGLLEG-MQV-HGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDK 177
P+ K IAR G ++G ++V HG+ K + L+G+ ++++A +FD+
Sbjct: 63 PLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSL----LIGISKDPSRMMEAHQLFDE 118
Query: 178 MSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYG 237
+ D +++M+ Y +N F++ + F+ M D + +++ +R G +
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKA 174
Query: 238 -EAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSR 296
E + + N V+ +A +I+ Y CG ++ A F ++ +V TAM++GY +
Sbjct: 175 RELFYSMMEKNEVSWNA-----MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 297 AGQVEDARLIF-DQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLS 355
A +VE A +F D V K+L+ W+AMISGY EN+ P++ LKLF M G++P+ + S
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 356 VISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRN 415
+ C+ L L ++IH + K+ D+ ++I MY KCG L A ++FE M++++
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 416 VISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFA 475
V++W +MI+ +A HG+A AL F +M D I P+ +TF+ VL AC+HAGLV+ G F
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 476 SMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEI 535
SM +Y + P+ +HY CMVDL GRA L EAL+L+ +MPF P+ ++G+L+ ACRVH +
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNV 469
Query: 536 ELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEM 595
ELAEFAA++LLQL+ + V L+NIYA RW+DV +RK MKE ++K S IE+
Sbjct: 470 ELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529
Query: 596 NNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHS 655
N+V+ F ++DR H + D I++KL E+ ++K AGY P++ AL ++E+E+K +++LWHS
Sbjct: 530 RNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHS 589
Query: 656 EKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGV 715
EKLA+ +G I + S I++ KNLR+C DCH IK +S++ REI++RD TRFHH+KDG
Sbjct: 590 EKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGS 649
Query: 716 CSCKDYW 722
CSC DYW
Sbjct: 650 CSCGDYW 656
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%)
Query: 86 NKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTK 145
N I + RP+ LK+F ML EG+ + L + L G Q+H + +K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 146 LGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNL 205
+D T L+ MY CG++ DA +F+ M +D+V W+ MI GY Q+G D+ L L
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 206 FEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFII 245
F EM + + PD + +L AC+ AG ++ G A E ++
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 380/698 (54%), Gaps = 65/698 (9%)
Query: 66 SLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNE-GLTIDRFSFPPIL 124
SL A +F ++ N I + + +PK AL++F +M NE G D + +L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 125 KAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIV 184
A G Q+H + FV LV MY CG + +A +F MS +D+V
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 185 PWSVMIDGYFQNGLFDEVLNLFEEMK---------------------------------- 210
W+ M+ GY Q G F++ + LFE+M+
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 211 -MSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCM 269
S ++P+E+ L +LS C+ G L +G+ +H + I + L +
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD----------- 405
Query: 270 DMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMV--EKDLICWSAMISGYAE 327
+N+V++ ++ Y++ +V+ AR +FD + E+D++ W+ MI GY++
Sbjct: 406 ------------ENMVINQ-LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 328 NNHPQEALKLFNEM--QVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGG-D 384
+ +AL+L +EM + C +P+ T+ + ACA L L ++IH Y +N
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 385 LRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKD 444
L V+N +IDMYAKCGS+ AR VF+ M +N ++WTS++ + +HG AL F++M+
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 445 ESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLR 504
+GVT + VLYACSH+G++D+G E F M + + P EHY C+VDL GRA L
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 505 EALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYA 564
AL L+E MP P V+W + ++ CR+HG++EL E+AA+++ +L +HDG+ LLSN+YA
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692
Query: 565 KDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVIS 624
RW+DV +R M+ +G+ K CS +E F D++H +IY+ L + +
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQ 752
Query: 625 ELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCED 684
+K GYVP+ AL D++DEEK +++ HSEKLAL YG++++ + + IRI KNLRVC D
Sbjct: 753 RIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGD 812
Query: 685 CHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
CH +S++ +I++RD +RFHH+K+G CSCK YW
Sbjct: 813 CHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 294/570 (51%), Gaps = 32/570 (5%)
Query: 15 TSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPT-TTPSSLYYALSI 73
T I C +++ +K H ++L +L L LTS + T + L +A+S+
Sbjct: 31 TPPFIHKCKTISQVKLIHQKLLSFG---------ILTLNLTSHLISTYISVGCLSHAVSL 81
Query: 74 FSQIPAPPSRVS--NKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAE 131
+ P + V N IR+ + L +F M + T D ++FP + KA
Sbjct: 82 LRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS 141
Query: 132 GLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMID 191
+ G H L GF S+ FV LV MY C + DAR +FD+MS D+V W+ +I+
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 192 GYFQNGLFDEVLNLFEEMKMS-NVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVA 250
Y + G L +F M PD + L +L C+ G S G+ +H F + + +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 251 LDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQM 310
+ + + L+ MYA CG MD A +F + +K++V AMV+GYS+ G+ EDA +F++M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 311 VEK----DLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVL 366
E+ D++ WSA ISGYA+ EAL + +M G+KP++VT++SV+S CA +G L
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 367 DQAQRIHLY-------IDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERM--RRRNVI 417
+ IH Y + KN G + V N +IDMYAKC +++AR +F+ + + R+V+
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 418 SWTSMINAFAIHGDARNALIFFNKMKDESID--PNGVTFIGVLYACSHAGLVDEGREIFA 475
+WT MI ++ HGDA AL ++M +E PN T L AC+ + G++I A
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 476 -SMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGE 534
++ N+ N P + C++D++ + + +A + + M A N V W SLM +HG
Sbjct: 502 YALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGY 559
Query: 535 IELAEFAAKQLLQLDPDHDGALVLLSNIYA 564
E A ++ ++ DG + LL +YA
Sbjct: 560 GEEALGIFDEMRRIGFKLDG-VTLLVVLYA 588
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/706 (34%), Positives = 381/706 (53%), Gaps = 40/706 (5%)
Query: 18 AISSCSSLTHMKQTHAQILKLSHSHHSQ-NSLLLKLLLTSFSLPTTTPSSLYYALSIFSQ 76
A S+ +L +Q HA KL + +++ LL L + T AL F +
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET--------ALDYFLE 449
Query: 77 IPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEG 136
+ N + A +++ ++F +M E + +++++P ILK R L G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 137 MQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQN 196
Q+H K F + +V + L+ MY GK+ A + + + +D+V W+ MI GY Q
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 197 GLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQ 256
D+ L F +M + DE+ L+ +SAC+ L G+ +H + + D Q
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 257 STLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLI 316
+ L+T+Y SR G++E++ L F+Q D I
Sbjct: 630 NALVTLY-------------------------------SRCGKIEESYLAFEQTEAGDNI 658
Query: 317 CWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYI 376
W+A++SG+ ++ + +EAL++F M G+ + T S + A + + Q +++H I
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 377 DKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNAL 436
K + + V NA+I MYAKCGS+ A + F + +N +SW ++INA++ HG AL
Sbjct: 719 TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEAL 778
Query: 437 IFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDL 496
F++M ++ PN VT +GVL ACSH GLVD+G F SM +EY + PK EHY C+VD+
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 497 FGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGAL 556
RA LL A E ++ MP P+ ++W +L++AC VH +E+ EFAA LL+L+P+
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 557 VLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIY 616
VLLSN+YA K+W R+ MKE+G+ KE S IE+ N ++ F D++H D+I+
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIH 958
Query: 617 EKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIV 676
E ++ GYV D S L +L+ E+K +I HSEKLA+ +GL+S I ++
Sbjct: 959 EYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVM 1018
Query: 677 KNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
KNLRVC DCH +IK VSKV REI++RD RFHH++ G CSCKDYW
Sbjct: 1019 KNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 247/531 (46%), Gaps = 51/531 (9%)
Query: 10 PLTLPTSTAISSCSSLTHMK---QTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS 66
P S+ +S+C + ++ Q H +LKL S S + L+ F L +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS--SDTYVCNALVSLYFHL-----GN 338
Query: 67 LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126
L A IFS + + N I +S + A+++F +M +GL D + ++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPW 186
+ L G Q+H TKLGF S+ ++ L+ +Y C I A F + ++V W
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 187 SVMIDGYFQNGLFDEVLN---LFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEF 243
+VM+ Y GL D++ N +F +M++ + P++ IL C R G+L GE +H
Sbjct: 459 NVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 244 IIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDA 303
II N L+A++ S LI MYA G +D A + + K++V T M++GY+
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT-------- 567
Query: 304 RLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHL 363
+ N +AL F +M G++ D+V + + +SACA L
Sbjct: 568 -----------------------QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 364 GVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMI 423
L + Q+IH + F DL NA++ +Y++CG +E + FE+ + I+W +++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 424 NAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNI 483
+ F G+ AL F +M E ID N TF + A S + +G+++ A +T +
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGY 723
Query: 484 PPKYEHYGCMVDLFGRANLLREA-LELVETMPFAPNVVIWGSLMAACRVHG 533
+ E ++ ++ + + +A + +E N V W +++ A HG
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVS--TKNEVSWNAIINAYSKHG 772
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 240/509 (47%), Gaps = 47/509 (9%)
Query: 24 SLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIPAPPSR 83
SL ++ H+QILKL N L + L + LY A +F ++P
Sbjct: 100 SLDEGRKLHSQILKLGLD---SNGCLSEKLFDFYLFK----GDLYGAFKVFDEMPERTIF 152
Query: 84 VSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGM-QVHGL 142
NK I+ ++ + +F++M++E +T + +F +L+A + + Q+H
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 143 GTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEV 202
G V L+ +Y G + AR +FD + +D W MI G +N E
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 203 LNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITM 262
+ LF +M + + P S +LSAC + +L GE +H ++ + D ++ + L+++
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 263 YANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMI 322
Y + G NL+ A IF M ++D + ++ +I
Sbjct: 333 YFHLG---------------NLI----------------SAEHIFSNMSQRDAVTYNTLI 361
Query: 323 SGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFG 382
+G ++ + ++A++LF M + G++PD T+ S++ AC+ G L + Q++H Y K F
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 383 GDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKM 442
+ ++ A++++YAKC +E+A + F NV+ W M+ A+ + D RN+ F +M
Sbjct: 422 SNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Query: 443 KDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGC--MVDLFGRA 500
+ E I PN T+ +L C G ++ G +I + + + Y C ++D++ +
Sbjct: 482 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII---KTNFQLNAYVCSVLIDMYAKL 538
Query: 501 NLLREALELVETMPFA-PNVVIWGSLMAA 528
L A +++ + FA +VV W +++A
Sbjct: 539 GKLDTAWDIL--IRFAGKDVVSWTTMIAG 565
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 161/409 (39%), Gaps = 88/409 (21%)
Query: 206 FEEMKMSNVE-----PDEMVLSKILSACSRA-GNLSYGEAVHEFIIDNNVALDAHLQSTL 259
F+E ++ +VE P+ L +L C + G+L G +H I+ + LD++
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQIL--KLGLDSN----- 119
Query: 260 ITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWS 319
GC+ ++ LFD L K G + A +FD+M E+ + W+
Sbjct: 120 -------GCL--SEKLFDFYLFK---------------GDLYGAFKVFDEMPERTIFTWN 155
Query: 320 AMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGV-LDQAQRIHLYIDK 378
MI A N E LF M + P++ T V+ AC V D ++IH I
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY 215
Query: 379 NAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIF 438
V N +ID+Y++ G ++ AR VF+ +R ++ SW +MI+ + + A+
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 439 FNKMKDESIDPNGVTFIGVLYACS-----------------------------------H 463
F M I P F VL AC H
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 464 AGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETM---PFAPNVV 520
G + IF++M+ + Y +++ + +A+EL + M P+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVT-----YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 521 IWGSLMAACRVHGEI----ELAEFAAKQLLQLDPDHDGALVLLSNIYAK 565
SL+ AC G + +L + K + +GAL+ N+YAK
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL---NLYAK 436
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 320 AMISGY-AENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHL-GVLDQAQRIHLYID 377
A IS Y +E+ QE K + ++ G++P+ T+ ++ C G LD+ +++H I
Sbjct: 55 AAISVYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQIL 112
Query: 378 KNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALI 437
K + ++ + D Y G L A +VF+ M R + +W MI A
Sbjct: 113 KLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG 172
Query: 438 FFNKMKDESIDPNGVTFIGVLYAC 461
F +M E++ PN TF GVL AC
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEAC 196
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 370/650 (56%), Gaps = 39/650 (6%)
Query: 75 SQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLL 134
S + A S N +R +++ ++ ++ ML G + D FSFP ILK+ A +
Sbjct: 11 SAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV 70
Query: 135 EGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDK--MSYRDIVPWSVMIDG 192
G Q+H TK G ++PFV T L+ MY CG + DAR +F++ S + V ++ +I G
Sbjct: 71 SGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISG 130
Query: 193 YFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALD 252
Y N + +F MK + V D + + ++ C+ L G ++H + + +
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 253 AHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVE 312
+ ++ ITMY CG VE R +FD+M
Sbjct: 191 VAVLNSFITMYMKCG-------------------------------SVEAGRRLFDEMPV 219
Query: 313 KDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRI 372
K LI W+A+ISGY++N + L+L+ +M+ G+ PD T++SV+S+CAHLG +
Sbjct: 220 KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279
Query: 373 HLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDA 432
++ N F ++ V+NA I MYA+CG+L AR VF+ M ++++SWT+MI + +HG
Sbjct: 280 GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMG 339
Query: 433 RNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGC 492
L+ F+ M I P+G F+ VL ACSH+GL D+G E+F +M EY + P EHY C
Sbjct: 340 EIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC 399
Query: 493 MVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDH 552
+VDL GRA L EA+E +E+MP P+ +WG+L+ AC++H +++AE A ++++ +P++
Sbjct: 400 LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNN 459
Query: 553 DGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQT 612
G VL+SNIY+ K + + +R M+ER K+ S +E V+ FL DRSH+QT
Sbjct: 460 IGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQT 519
Query: 613 DQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSC 672
++++ L+E+ + V ++ + EE HSE+LA+ +G+++S +
Sbjct: 520 EEVHRMLDELETS------VMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTE 573
Query: 673 IRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
I ++KNLRVCEDCH F+K VSK+ R+ V+RD +RFH++KDGVCSCKDYW
Sbjct: 574 ILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%)
Query: 53 LLTSFSLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEG 112
+L SF S+ +F ++P N I S + L+++ +M + G
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 113 LTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDAR 172
+ D F+ +L + A G +V L GF + FV + MY CG + AR
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKAR 312
Query: 173 LMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAG 232
+FD M + +V W+ MI Y +G+ + L LF++M + PD V +LSACS +G
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/640 (38%), Positives = 366/640 (57%), Gaps = 43/640 (6%)
Query: 86 NKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTK 145
++F R P+ A+K + + GL D ++ ++K + EG + +
Sbjct: 31 SEFTRLCYQRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEG---NLICRH 86
Query: 146 LGF-GSDP--FVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEV 202
L F G P F+ L+ MY + DA +FD+M R+++ W+ MI Y + + +
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 203 LNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITM 262
L L M NV P+ S +L +C+ +S +H II + D ++S LI +
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 263 YANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMI 322
+A + G+ EDA +FD+MV D I W+++I
Sbjct: 204 FA-------------------------------KLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 323 SGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFG 382
G+A+N+ AL+LF M+ G ++ T+ SV+ AC L +L+ + H++I K +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YD 290
Query: 383 GDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKM 442
DL +NNA++DMY KCGSLE A VF +M+ R+VI+W++MI+ A +G ++ AL F +M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 443 KDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANL 502
K PN +T +GVL+ACSHAGL+++G F SM Y I P EHYGCM+DL G+A
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 503 LREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNI 562
L +A++L+ M P+ V W +L+ ACRV + LAE+AAK+++ LDP+ G LLSNI
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNI 470
Query: 563 YAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEV 622
YA ++W V E+R M++RGI KE CS IE+N +++ F+ D SH Q ++ +KLN++
Sbjct: 471 YANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Query: 623 ISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVC 682
I L GYVP+ + L DLE E+ + + HSEKLAL +GL++ + IRI KNLR+C
Sbjct: 531 IHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRIC 590
Query: 683 EDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
DCH F KL SK+ R IVIRD R+HH++DG CSC DYW
Sbjct: 591 GDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 4 LSQPTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTT 63
L +P S+ + SC+ ++ ++ H I+K ++ + ++ L
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIK----EGLESDVFVRSALIDVFAKLGE 209
Query: 64 PSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPI 123
P ALS+F ++ + V N I + + R AL++F +M G ++ + +
Sbjct: 210 PED---ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 124 LKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDI 183
L+A L GMQ H K + D + LV MY CG + DA +F++M RD+
Sbjct: 267 LRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
Query: 184 VPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYG 237
+ WS MI G QNG E L LFE MK S +P+ + + +L ACS AG L G
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 46/253 (18%)
Query: 16 STAISSCSSLTHMK---QTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALS 72
++ + +C+ L ++ Q H I+K + Q+ +L L+ + SL AL
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVK-----YDQDLILNNALVDMY----CKCGSLEDALR 314
Query: 73 IFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEG 132
+F+Q+ + I ++ + + ALK+F +M + G + + +L A + A G
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA-G 373
Query: 133 LLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDG 192
LLE + K +G DP + YG MID
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREH-----YGC------------------------MIDL 404
Query: 193 YFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALD 252
+ G D+ + L EM+ EPD + +L AC N+ E + +I + D
Sbjct: 405 LGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE-D 460
Query: 253 AHLQSTLITMYAN 265
A + L +YAN
Sbjct: 461 AGTYTLLSNIYAN 473
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/612 (37%), Positives = 350/612 (57%), Gaps = 42/612 (6%)
Query: 116 DRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMF 175
DR + +LK + L++G VH + F D + L+ MY CG + +AR +F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 176 DKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLS 235
+KM RD V W+ +I GY Q+ + L F +M P+E LS ++ A +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 236 YGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYS 295
G +H F + CG FD N+ V +A++ Y+
Sbjct: 179 CGHQLHGFCV-------------------KCG--------FDS----NVHVGSALLDLYT 207
Query: 296 RAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLS 355
R G ++DA+L+FD + ++ + W+A+I+G+A + ++AL+LF M G +P + S
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 356 VISACAHLGVLDQAQRIHLYIDKN-----AFGGDLRVNNAIIDMYAKCGSLESAREVFER 410
+ AC+ G L+Q + +H Y+ K+ AF G N ++DMYAK GS+ AR++F+R
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-----NTLLDMYAKSGSIHDARKIFDR 322
Query: 411 MRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEG 470
+ +R+V+SW S++ A+A HG + A+ +F +M+ I PN ++F+ VL ACSH+GL+DEG
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 471 REIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACR 530
+ M + I P+ HY +VDL GRA L AL +E MP P IW +L+ ACR
Sbjct: 383 WHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 531 VHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERAC 590
+H EL +AA+ + +LDPD G V+L NIYA RW D +RK MKE G+ KE AC
Sbjct: 442 MHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPAC 501
Query: 591 SRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREV 650
S +E+ N ++ F+ D H Q ++I K EV++++K GYVPD +V ++ +E+
Sbjct: 502 SWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVN 561
Query: 651 ILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHH 710
+ +HSEK+AL + L+++ S I I KN+RVC DCH IKL SKV REI++RD RFHH
Sbjct: 562 LQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHH 621
Query: 711 YKDGVCSCKDYW 722
+KDG CSCKDYW
Sbjct: 622 FKDGNCSCKDYW 633
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 32/365 (8%)
Query: 66 SLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILK 125
SL A +F ++P I S RP AL F +ML G + + F+ ++K
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 126 AIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVP 185
A A G Q+HG K GF S+ V + L+ +Y G + DA+L+FD + R+ V
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 186 WSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFII 245
W+ +I G+ + ++ L LF+ M P + + ACS G L G+ VH ++I
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 246 DNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARL 305
+ L A +TL+ MYA G + A+ +FD++ +++V ++++ Y
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY----------- 338
Query: 306 IFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGV 365
A++ +EA+ F EM+ G++P++++ LSV++AC+H G+
Sbjct: 339 --------------------AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 366 LDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVIS-WTSMIN 424
LD+ + + K+ + ++D+ + G L A E M + W +++N
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 425 AFAIH 429
A +H
Sbjct: 439 ACRMH 443
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 151/326 (46%), Gaps = 33/326 (10%)
Query: 208 EMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCG 267
+++ S + D + +L C+ L G VH I+ + D + +TL+ MYA CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 268 CMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAE 327
++ A+ +F+K+ ++ V T ++SGYS+ + DA L F+QM+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR--------------- 154
Query: 328 NNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRV 387
G P++ T+ SVI A A ++H + K F ++ V
Sbjct: 155 ----------------FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 388 NNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESI 447
+A++D+Y + G ++ A+ VF+ + RN +SW ++I A AL F M +
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 448 DPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREAL 507
P+ ++ + ACS G +++G+ + A M + ++D++ ++ + +A
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIHDAR 317
Query: 508 ELVETMPFAPNVVIWGSLMAACRVHG 533
++ + + +VV W SL+ A HG
Sbjct: 318 KIFDRLA-KRDVVSWNSLLTAYAQHG 342
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 118/247 (47%), Gaps = 43/247 (17%)
Query: 339 NEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKC 398
N+++ + D+ +++ C +L Q + +H +I ++ F D+ + N +++MYAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 399 GSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVL 458
GSLE AR+VFE+M +R+ ++WT++I+ ++ H +AL+FFN+M PN T V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 459 YA--------CSHA---------------------------GLVDEGREIFASMTNEYNI 483
A C H GL+D+ + +F ++ + ++
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 484 PPKYEHYGCMVDLFGRANLLREALELVETM---PFAPNVVIWGSLMAACRVHGEIELAEF 540
+ ++ R + +ALEL + M F P+ + SL AC G +E ++
Sbjct: 229 S-----WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 541 AAKQLLQ 547
+++
Sbjct: 284 VHAYMIK 290
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/606 (37%), Positives = 359/606 (59%), Gaps = 10/606 (1%)
Query: 124 LKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDI 183
L+ AR L +H KLG + LV +YG CG A +FD+M +RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 184 VPWSVMIDGYFQNGLFDEVLNLFEEMKMSN-VEPDEMVLSKILSACSRAGNLSYGEAVHE 242
+ W+ ++ Q L + L++F + S+ + PD+ V S ++ AC+ G++ +G VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 243 FIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVED 302
I + A D ++S+L+ MYA CG ++ AK +FD + +KN + TAMVSGY+++G+ E+
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 303 ARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKP-DKVTMLSVISACA 361
A +F + K+L W+A+ISG+ ++ EA +F EM+ + D + + S++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 362 HLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTS 421
+L +++H + F + ++NA+IDMYAKC + +A+++F RMR R+V+SWTS
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 422 MINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEY 481
+I A HG A AL ++ M + PN VTF+G++YACSH G V++GRE+F SMT +Y
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 482 NIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGE----IEL 537
I P +HY C++DL GR+ LL EA L+ TMPF P+ W +L++AC+ G I +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 538 AEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNN 597
A+ DP +LLSNIYA W V E R+ + E + K+ S +E+
Sbjct: 430 ADHLVSSFKLKDPS---TYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRK 486
Query: 598 EVYEFLTADRSHKQTDQIYEKLNEVISELK-PAGYVPDIHSALVDLEDEEKREVILWHSE 656
E F + SH + I+ L ++ E++ GYVPD L D++++EK +++ WHSE
Sbjct: 487 ETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSE 546
Query: 657 KLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVC 716
+ A+ YGL+ + + IRIVKNLRVC DCH +K +S++ REI++RD TR+HH+K G C
Sbjct: 547 RSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKC 606
Query: 717 SCKDYW 722
SC D+W
Sbjct: 607 SCNDFW 612
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 10/284 (3%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTI-DRFSFPPILKAIA 128
AL +F +P I S + A VF +M E + I D I+ A A
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 129 RAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSV 188
+ G QVHGL LGF S F+ L+ MY C ++ A+ +F +M +RD+V W+
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 189 MIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYG-EAVHEFIIDN 247
+I G Q+G ++ L L+++M V+P+E+ ++ ACS G + G E D
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 248 NVALDAHLQSTLITMYANCGCMDMAKGLFDKV-LLKNLVVSTAMVSGYSRAGQVEDARLI 306
+ + L+ + G +D A+ L + + A++S R G+ + I
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 307 FDQMVE----KDLICWSAMISGYAENN---HPQEALKLFNEMQV 343
D +V KD + + + YA + EA + EM+V
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEV 473
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Query: 354 LSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRR 413
L + CA L A+ +H +I K + N ++++Y KCG+ A +VF+ M
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 414 RNVISWTSMINAF-AIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGRE 472
R+ I+W S++ A + + +F + + P+ F ++ AC++ G +D GR+
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 473 IFAS-MTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRV 531
+ + +EY + +VD++ + LL A + +++ N + W ++++
Sbjct: 127 VHCHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIR-VKNTISWTAMVSGYAK 183
Query: 532 HGEIELA 538
G E A
Sbjct: 184 SGRKEEA 190
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/527 (40%), Positives = 347/527 (65%), Gaps = 7/527 (1%)
Query: 203 LNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITM 262
++++ M+ V PD +L + +L G+ H I+ + D ++++L+ M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 263 YANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMI 322
Y++CG + A+ +FD K+L ++V+ Y++AG ++DAR +FD+M E+++I WS +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 323 SGYAENNHPQEALKLFNEMQV-----CGMKPDKVTMLSVISACAHLGVLDQAQRIHLYID 377
+GY +EAL LF EMQ+ ++P++ TM +V+SAC LG L+Q + +H YID
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 378 KNAFGGDLRVNNAIIDMYAKCGSLESAREVFERM-RRRNVISWTSMINAFAIHGDARNAL 436
K D+ + A+IDMYAKCGSLE A+ VF + +++V ++++MI A++G
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 437 IFFNKMK-DESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVD 495
F++M ++I+PN VTF+G+L AC H GL++EG+ F M E+ I P +HYGCMVD
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 496 LFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGA 555
L+GR+ L++EA + +MP P+V+IWGSL++ R+ G+I+ E A K+L++LDP + GA
Sbjct: 347 LYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA 406
Query: 556 LVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQI 615
VLLSN+YAK RW +V +R M+ +GI K CS +E+ V+EF+ D S +++++I
Sbjct: 407 YVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERI 466
Query: 616 YEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRI 675
Y L+E++ L+ AGYV D L+DL +++K + +HSEKLA+ + L+ ++ + +RI
Sbjct: 467 YAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRI 526
Query: 676 VKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+KNLR+C DCH +K++SK+++REIV+RD RFHH++DG CSC+D+W
Sbjct: 527 IKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 72/391 (18%)
Query: 86 NKFIRAI--SWSHRPKHA-LKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGL 142
N IRAI + S +H+ + V+L+M N ++ D +FP +L + L G + H
Sbjct: 28 NIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQ 87
Query: 143 GTKLGFGSDPFVQTGLVGMYGACGK-------------------------------ILDA 171
G DPFV+T L+ MY +CG I DA
Sbjct: 88 ILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDA 147
Query: 172 RLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSN-----VEPDEMVLSKILS 226
R +FD+M R+++ WS +I+GY G + E L+LF EM++ V P+E +S +LS
Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 227 ACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVV 286
AC R G L G+ VH +I +V +D L + LI MYA CG ++ AK +F+ + K
Sbjct: 208 ACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK---- 263
Query: 287 STAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVC-G 345
KD+ +SAMI A E +LF+EM
Sbjct: 264 --------------------------KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 346 MKPDKVTMLSVISACAHLGVLDQAQR-IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESA 404
+ P+ VT + ++ AC H G++++ + + I++ ++ ++D+Y + G ++ A
Sbjct: 298 INPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Query: 405 REVFERM-RRRNVISWTSMINAFAIHGDARN 434
M +V+ W S+++ + GD +
Sbjct: 358 ESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 388
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/622 (35%), Positives = 360/622 (57%), Gaps = 33/622 (5%)
Query: 103 KVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMY 162
+ L+M G + + +L A L +G +VH K + +++T L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 163 GACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLS 222
G C + DAR + D+M +++V W+ MI Y Q G E L +F EM S+ +P+E +
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 223 KILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLK 282
+L++C RA L G+ +H I+ N D+H+
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNY--DSHI--------------------------- 188
Query: 283 NLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQ 342
V ++++ Y++AGQ+++AR IF+ + E+D++ +A+I+GYA+ +EAL++F+ +
Sbjct: 189 --FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 343 VCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLE 402
GM P+ VT S+++A + L +LD ++ H ++ + + N++IDMY+KCG+L
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLS 306
Query: 403 SAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDES-IDPNGVTFIGVLYAC 461
AR +F+ M R ISW +M+ ++ HG R L F M+DE + P+ VT + VL C
Sbjct: 307 YARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGC 366
Query: 462 SHAGLVDEGREIFASMT-NEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVV 520
SH + D G IF M EY P EHYGC+VD+ GRA + EA E ++ MP P
Sbjct: 367 SHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG 426
Query: 521 IWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMK 580
+ GSL+ ACRVH +++ E ++L++++P++ G V+LSN+YA RW DV +R M
Sbjct: 427 VLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMM 486
Query: 581 ERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALV 640
++ + KE S I+ ++ F DR+H + +++ K+ E+ ++K AGYVPD+ L
Sbjct: 487 QKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLY 546
Query: 641 DLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREI 700
D+++E+K +++L HSEKLAL +GLI++ + IR+ KNLR+C DCHNF K+ SKV+ RE+
Sbjct: 547 DVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREV 606
Query: 701 VIRDRTRFHHYKDGVCSCKDYW 722
+RD+ RFH DG+CSC DYW
Sbjct: 607 SLRDKNRFHQIVDGICSCGDYW 628
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 32/344 (9%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIAR 129
A + ++P I S + AL VF +M+ + F+F +L + R
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 130 AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVM 189
A GL G Q+HGL K + S FV + L+ MY G+I +AR +F+ + RD+V + +
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 190 IDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNV 249
I GY Q GL +E L +F + + P+ + + +L+A S L +G+ H ++ +
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 250 ALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQ 309
A LQ++LI MY+ CG + A+ LFD + + + AM+ GYS+ G + +F
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRL 345
Query: 310 MVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQA 369
M ++ + KPD VT+L+V+S C+H + D
Sbjct: 346 MRDEKRV------------------------------KPDAVTLLAVLSGCSHGRMEDTG 375
Query: 370 QRIHLYIDKNAFGGDLRVNN--AIIDMYAKCGSLESAREVFERM 411
I + +G + I+DM + G ++ A E +RM
Sbjct: 376 LNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 252/721 (34%), Positives = 392/721 (54%), Gaps = 49/721 (6%)
Query: 6 QPTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPS 65
Q T L L T+ + S L +Q H LKL L L+LT +
Sbjct: 315 QVTFILMLATAVKVDS---LALGQQVHCMALKLG----------LDLMLTVSNSLINMYC 361
Query: 66 SLY---YALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPP 122
L +A ++F + N I I+ + A+ +F+++L GL D+++
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 123 ILKAIAR-AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYR 181
+LKA + EGL QVH K+ SD FV T L+ Y + +A ++F++ ++
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF- 480
Query: 182 DIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVH 241
D+V W+ M+ GY Q+ + L LF M D+ L+ + C ++ G+ VH
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 242 EFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVE 301
+ I + LD + S ++ MY CG DM+
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCG--DMSA---------------------------- 570
Query: 302 DARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACA 361
A+ FD + D + W+ MISG EN + A +F++M++ G+ PD+ T+ ++ A +
Sbjct: 571 -AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 362 HLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTS 421
L L+Q ++IH K D V +++DMYAKCGS++ A +F+R+ N+ +W +
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 689
Query: 422 MINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEY 481
M+ A HG+ + L F +MK I P+ VTFIGVL ACSH+GLV E + SM +Y
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 482 NIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFA 541
I P+ EHY C+ D GRA L+++A L+E+M + ++ +L+AACRV G+ E +
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Query: 542 AKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYE 601
A +LL+L+P A VLLSN+YA +W ++ R MK + K+ S IE+ N+++
Sbjct: 810 ATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHI 869
Query: 602 FLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALC 661
F+ DRS++QT+ IY K+ ++I ++K GYVP+ LVD+E+EEK + +HSEKLA+
Sbjct: 870 FVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVA 929
Query: 662 YGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDY 721
+GL+S+ + IR++KNLRVC DCHN +K ++KVY REIV+RD RFH +KDG+CSC DY
Sbjct: 930 FGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDY 989
Query: 722 W 722
W
Sbjct: 990 W 990
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 47/458 (10%)
Query: 102 LKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGM 161
LK F M+ + D+ +F +L + + L G QVH + KLG V L+ M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 162 YGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVL 221
Y K AR +FD MS RD++ W+ +I G QNGL E + LF ++ ++PD+ +
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 222 SKILSACSR-AGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVL 280
+ +L A S LS + VH I N D+ + + LI Y+ CM A+ LF++
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-- 477
Query: 281 LKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNE 340
N DL+ W+AM++GY +++ + LKLF
Sbjct: 478 -HNF-----------------------------DLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Query: 341 MQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGS 400
M G + D T+ +V C L ++Q +++H Y K+ + DL V++ I+DMY KCG
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 401 LESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYA 460
+ +A+ F+ + + ++WT+MI+ +G+ A F++M+ + P+ T + A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 461 CSHAGLVDEGREIFASM-----TNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPF 515
S +++GR+I A+ TN+ + +VD++ + + +A L + +
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTS------LVDMYAKCGSIDDAYCLFKRIEM 681
Query: 516 APNVVIWGSLMAACRVHGEIE--LAEFAAKQLLQLDPD 551
N+ W +++ HGE + L F + L + PD
Sbjct: 682 M-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 271/590 (45%), Gaps = 77/590 (13%)
Query: 18 AISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQI 77
AI+S S L K THA+IL + L+ L++ +S SL YA +F ++
Sbjct: 49 AITS-SDLMLGKCTHARILTF---EENPERFLINNLISMYS----KCGSLTYARRVFDKM 100
Query: 78 PAPPSRVSNKFIRAISWS-----HRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEG 132
P N + A + S + A +F + + + R + P+LK +
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 133 LLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDG 192
+ HG K+G D FV LV +Y GK+ + +++F++M YRD+V W++M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 193 YFQNGLFDEVLNLFEEMKMSNVEPDEM---VLSKILSACSRAG------NLSYGEAVHEF 243
Y + G +E ++L S + P+E+ +L++I S AG N + +V E
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE- 279
Query: 244 IIDNNVALDAHLQS-----------------------TLITMYANC------------GC 268
II N L +L S T I M A C
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 269 MDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAEN 328
M + GL D + L VS ++++ Y + + AR +FD M E+DLI W+++I+G A+N
Sbjct: 340 MALKLGL-DLM----LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 329 NHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGV-LDQAQRIHLYIDKNAFGGDLRV 387
EA+ LF ++ CG+KPD+ TM SV+ A + L L ++++H++ K D V
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 388 NNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESI 447
+ A+ID Y++ ++ A +FER ++++W +M+ + D L F M +
Sbjct: 455 STALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 448 DPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEH----YGCMVDLFGRANLL 503
+ T V C +++G+++ A Y I Y+ ++D++ + +
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHA-----YAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 504 REALELVETMPFAPNVVIWGSLMAACRVHGEIELA--EFAAKQLLQLDPD 551
A +++P P+ V W ++++ C +GE E A F+ +L+ + PD
Sbjct: 569 SAAQFAFDSIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/623 (38%), Positives = 364/623 (58%), Gaps = 40/623 (6%)
Query: 138 QVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDA----RLMFDKMSYRDIVPWSVMIDGY 193
Q+HGL K G +D + TG + ++ A I DA R + D ++ ++ GY
Sbjct: 23 QIHGLFIKYGVDTDSYF-TGKLILHCAI-SISDALPYARRLLLCFPEPDAFMFNTLVRGY 80
Query: 194 FQNGLFDEVLNLF-EEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALD 252
++ + +F E M+ V PD + ++ A +L G +H + + +
Sbjct: 81 SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESH 140
Query: 253 AHLQSTLITMYANCGCMDMAKG-------------------------------LFDKVLL 281
+ +TLI MY CGC++ A+ +FDK+L+
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 282 KNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEM 341
+N M++GY +AG++E A+ IF +M +D + WS MI G A N E+ F E+
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 342 QVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSL 401
Q GM P++V++ V+SAC+ G + + +H +++K + + VNNA+IDMY++CG++
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 402 ESAREVFERMR-RRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYA 460
AR VFE M+ +R ++SWTSMI A+HG A+ FN+M + P+G++FI +L+A
Sbjct: 321 PMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHA 380
Query: 461 CSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVV 520
CSHAGL++EG + F+ M Y+I P+ EHYGCMVDL+GR+ L++A + + MP P +
Sbjct: 381 CSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAI 440
Query: 521 IWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMK 580
+W +L+ AC HG IELAE ++L +LDP++ G LVLLSN YA +W+DV +RKSM
Sbjct: 441 VWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMI 500
Query: 581 ERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELK-PAGYVPDIHSAL 639
+ I K A S +E+ +Y+F ++ + +EKL E+I LK AGY P++ SAL
Sbjct: 501 VQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASAL 560
Query: 640 VDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYARE 699
D+E+EEK + + HSEKLAL + L K + IRIVKNLR+C DCH +KL SKVY E
Sbjct: 561 YDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVE 620
Query: 700 IVIRDRTRFHHYKDGVCSCKDYW 722
I++RDR RFH +KDG CSC+DYW
Sbjct: 621 ILVRDRNRFHSFKDGSCSCRDYW 643
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 226/505 (44%), Gaps = 118/505 (23%)
Query: 19 ISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIP 78
++SC +L + Q H +K + + + KL+L + +L YA + P
Sbjct: 12 LNSCKNLRALTQIHGLFIK--YGVDTDSYFTGKLIL---HCAISISDALPYARRLLLCFP 66
Query: 79 APPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTI-DRFSFPPILKAIARAEGLLEGM 137
P + + N +R S S P +++ VF++M+ +G D FSF ++KA+ L G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 138 QVHGLGTKLGFGSDPFVQTGLVGMYGACG------KILD--------------------- 170
Q+H K G S FV T L+GMYG CG K+ D
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 171 ----ARLMFDKMSYRDIVPWSVMIDGYFQ------------------------------- 195
AR +FDKM R+ W+VM+ GY +
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 196 NGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHL 255
NG F+E F E++ + + P+E+ L+ +LSACS++G+ +G+ +H F+ + +
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 256 QSTLITMYANCGCMDMAKGLFDKVLLKNLVVS-TAMVSGYSRAGQVEDARLIFDQMVEKD 314
+ LI MY+ CG + MA+ +F+ + K +VS T+M++G + GQ E
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE------------- 353
Query: 315 LICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQ---- 370
EA++LFNEM G+ PD ++ +S++ AC+H G++++ +
Sbjct: 354 ------------------EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS 395
Query: 371 ---RI-HLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMR-RRNVISWTSMINA 425
R+ H+ + +G ++D+Y + G L+ A + +M I W +++ A
Sbjct: 396 EMKRVYHIEPEIEHYG-------CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGA 448
Query: 426 FAIHGDARNALIFFNKMKDESIDPN 450
+ HG+ A ++ + +DPN
Sbjct: 449 CSSHGNIELAEQVKQRLNE--LDPN 471
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/666 (35%), Positives = 372/666 (55%), Gaps = 42/666 (6%)
Query: 64 PSSLYYALSIFSQIPAPPSRVSN-KFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPP 122
P S AL+ S +++SN + I+++ + K A++V L++ + + ++
Sbjct: 27 PPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYEL 82
Query: 123 ILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRD 182
++ L + ++VH G DPF+ T L+GMY G + AR +FDK R
Sbjct: 83 LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142
Query: 183 IVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSAC----SRAGNLSYGE 238
I W+ + G +EVL L+ +M VE D + +L AC +L G+
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202
Query: 239 AVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAG 298
+H + + ++ +TL+ MYA GC+D A +F + ++N+V +AM++ Y
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY---- 258
Query: 299 QVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEM--QVCGMKPDKVTMLSV 356
A+N EAL+ F EM + P+ VTM+SV
Sbjct: 259 ---------------------------AKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 357 ISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNV 416
+ ACA L L+Q + IH YI + L V +A++ MY +CG LE + VF+RM R+V
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351
Query: 417 ISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFAS 476
+SW S+I+++ +HG + A+ F +M P VTF+ VL ACSH GLV+EG+ +F +
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFET 411
Query: 477 MTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIE 536
M ++ I P+ EHY CMVDL GRAN L EA ++V+ M P +WGSL+ +CR+HG +E
Sbjct: 412 MWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVE 471
Query: 537 LAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMN 596
LAE A+++L L+P + G VLL++IYA+ + W +V ++K ++ RG+ K +E+
Sbjct: 472 LAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVR 531
Query: 597 NEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSE 656
++Y F++ D + +QI+ L ++ ++K GY+P L +LE EEK ++L HSE
Sbjct: 532 RKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSE 591
Query: 657 KLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVC 716
KLAL +GLI++ K IRI KNLR+CEDCH F K +SK +EI++RD RFH +K+GVC
Sbjct: 592 KLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVC 651
Query: 717 SCKDYW 722
SC DYW
Sbjct: 652 SCGDYW 657
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 204/442 (46%), Gaps = 49/442 (11%)
Query: 1 MSTLSQPTKPLTLPTSTAISSC---SSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSF 57
+ LSQ + P I C SSL+ + H IL + Q+ L L+ +
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD---NGSDQDPFLATKLIGMY 122
Query: 58 SLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDR 117
S S+ YA +F + V N RA++ + + L ++ KM G+ DR
Sbjct: 123 S----DLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178
Query: 118 FSFPPILKAIARAE----GLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARL 173
F++ +LKA +E L++G ++H T+ G+ S ++ T LV MY G + A
Sbjct: 179 FTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASY 238
Query: 174 MFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEM--KMSNVEPDEMVLSKILSACSRA 231
+F M R++V WS MI Y +NG E L F EM + + P+ + + +L AC+
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 232 GNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMV 291
L G+ +H +I+ + + S L+TMY CG +++ + +FD++ +++V +++
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLI 358
Query: 292 SGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKV 351
S Y + GY ++A+++F EM G P V
Sbjct: 359 SSYG--------------------------VHGYG-----KKAIQIFEEMLANGASPTPV 387
Query: 352 TMLSVISACAHLGVLDQAQRIHLYIDKN-AFGGDLRVNNAIIDMYAKCGSLESAREVFER 410
T +SV+ AC+H G++++ +R+ + ++ + ++D+ + L+ A ++ +
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 411 MRRR-NVISWTSMINAFAIHGD 431
MR W S++ + IHG+
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGN 469
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/683 (34%), Positives = 358/683 (52%), Gaps = 64/683 (9%)
Query: 72 SIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNE-GLTIDRFSFPPILKAIARA 130
S F ++P N I S S A+K + M+ + + R + +LK +
Sbjct: 93 STFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSN 152
Query: 131 EGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYG--------------------------- 163
+ G Q+HG KLGF S V + L+ MY
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212
Query: 164 ----ACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEM 219
ACG I DA +F M +D V W+ MI G QNGL E + F EMK+ ++ D+
Sbjct: 213 GGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 220 VLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKV 279
+L AC G ++ G+ +H II N ++ S LI MY C C+ AK
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK------ 325
Query: 280 LLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFN 339
+FD+M +K+++ W+AM+ GY + +EA+K+F
Sbjct: 326 -------------------------TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 340 EMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCG 399
+MQ G+ PD T+ ISACA++ L++ + H + + V+N+++ +Y KCG
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 400 SLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLY 459
++ + +F M R+ +SWT+M++A+A G A + F+KM + P+GVT GV+
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 460 ACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNV 519
ACS AGLV++G+ F MT+EY I P HY CM+DLF R+ L EA+ + MPF P+
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA 540
Query: 520 VIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSM 579
+ W +L++ACR G +E+ ++AA+ L++LDP H LLS+IYA +W V +LR+ M
Sbjct: 541 IGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Query: 580 KERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSAL 639
+E+ + KE S I+ +++ F D S DQIY KL E+ +++ GY PD
Sbjct: 601 REKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVH 660
Query: 640 VDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYARE 699
D+E+ K +++ +HSE+LA+ +GLI IR+ KNLRVC DCHN K +S V RE
Sbjct: 661 HDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGRE 720
Query: 700 IVIRDRTRFHHYKDGVCSCKDYW 722
I++RD RFH +KDG CSC D+W
Sbjct: 721 ILVRDAVRFHRFKDGTCSCGDFW 743
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 212/409 (51%), Gaps = 20/409 (4%)
Query: 153 FVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMS 212
F L+ Y G I + F+K+ RD V W+V+I+GY +GL + + M M
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MR 131
Query: 213 NVEPD--EMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHL--QSTLITMYANCGC 268
+ + + L +L S G++S G+ +H +I + +++L S L+ MYAN GC
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI--KLGFESYLLVGSPLLYMYANVGC 189
Query: 269 MDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAEN 328
+ AK +F + +N V+ +++ G G +EDA +F M EKD + W+AMI G A+N
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQN 248
Query: 329 NHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVN 388
+EA++ F EM+V G+K D+ SV+ AC LG +++ ++IH I + F + V
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 389 NAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESID 448
+A+IDMY KC L A+ VF+RM+++NV+SWT+M+ + G A A+ F M+ ID
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 449 PNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHY----GCMVDLFGRANLLR 504
P+ T + AC++ ++EG + I HY +V L+G+ +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKA-----ITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 505 EALELVETMPFAPNVVIWGSLMAACRVHGE-IELAEFAAKQLLQ-LDPD 551
++ L M + V W ++++A G +E + K + L PD
Sbjct: 424 DSTRLFNEMN-VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPD 471
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 157/353 (44%), Gaps = 41/353 (11%)
Query: 236 YGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYS 295
Y + +H II + L + ++ YA A+ +FD++ NL ++ YS
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 296 RAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNE-MQVCGMKPDKVTML 354
+AG + + F+++ ++D + W+ +I GY+ + A+K +N M+ +VT++
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 355 SVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRR 414
+++ + G + ++IH + K F L V + ++ MYA G + A++VF + R
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 415 NV------------------------------ISWTSMINAFAIHGDARNALIFFNKMKD 444
N +SW +MI A +G A+ A+ F +MK
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 445 ESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLR 504
+ + + F VL AC G ++EG++I A + N ++D++ + L
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLH 322
Query: 505 EALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQL-----DPDH 552
A + + M NVV W +++ +G+ AE A K L + DPDH
Sbjct: 323 YAKTVFDRMK-QKNVVSWTAMVVG---YGQTGRAEEAVKIFLDMQRSGIDPDH 371
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/615 (37%), Positives = 365/615 (59%), Gaps = 18/615 (2%)
Query: 123 ILKAIARAEGLLEGMQVHGLGTKLGFGSDP--FVQTGLVGMYGACGKILDARLMFDK--M 178
+L+ A L G ++H + T G P ++ L Y + G+++ A+ +FD+ +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 179 SYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGE 238
S +D V W+ ++ + + GL + LF EM+ VE D++ + + C++ +L + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 239 AVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAG 298
H + V + + L+ MY CG + K +F+++ K++V T ++ +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 299 QVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQV-CGMKPDKVTMLSVI 357
+E R +F +M E++ + W+ M++GY +E L+L EM CG + VT+ S++
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 358 SACAHLGVLDQAQRIHLY-------IDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFER 410
SACA G L + +H+Y + + A D+ V A++DMYAKCG+++S+ VF
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 411 MRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEG 470
MR+RNV++W ++ + A+HG R + F +M E + P+ +TF VL ACSH+G+VDEG
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 471 REIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACR 530
F S+ Y + PK +HY CMVDL GRA L+ EA L+ MP PN V+ GSL+ +C
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 531 VHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERAC 590
VHG++E+AE ++L+Q+ P + +L+SN+Y + R LR S+++RGI K
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 591 SRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLED---EEK 647
S I +N+ V+ F + DRSH +T +IY KLNEVI ++ AGYVPD+ S LV + EEK
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDV-SGLVSHSEGDLEEK 548
Query: 648 REVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTR 707
+ + HSEKLA+C+GL+ +K + + + KNLR+C DCH+ +K+VSKVY REI+IRDR R
Sbjct: 549 EQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNR 608
Query: 708 FHHYKDGVCSCKDYW 722
FH +K G CSC DYW
Sbjct: 609 FHQFKGGSCSCSDYW 623
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 76/378 (20%)
Query: 100 HALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLV 159
+++K+F++M + + ID S + A+ E L Q HG+ K+G + V L+
Sbjct: 94 NSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALM 153
Query: 160 GMYGACG---------------------KILD----------ARLMFDKMSYRDIVPWSV 188
MYG CG +LD R +F +M R+ V W+V
Sbjct: 154 DMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTV 213
Query: 189 MIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMV-LSKILSACSRAGNLSYGEAVHEFIIDN 247
M+ GY G EVL L EM V L +LSAC+++GNL G VH + +
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKK 273
Query: 248 NVAL-------DAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQV 300
+ + D + + L+ MYA CG +D + +F + +N+V A+ SG + G+
Sbjct: 274 EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKG 333
Query: 301 EDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISAC 360
+F QM+ + +KPD +T +V+SAC
Sbjct: 334 RMVIDMFPQMIRE--------------------------------VKPDDLTFTAVLSAC 361
Query: 361 AHLGVLDQAQRIHLYIDKNAFGGDLRVNN--AIIDMYAKCGSLESAREVFERMR-RRNVI 417
+H G++D+ R + +G + +V++ ++D+ + G +E A + M N +
Sbjct: 362 SHSGIVDEGWRC--FHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 418 SWTSMINAFAIHGDARNA 435
S++ + ++HG A
Sbjct: 420 VLGSLLGSCSVHGKVEIA 437
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 356/592 (60%), Gaps = 8/592 (1%)
Query: 139 VHGLGTKLGFGSDPFVQTGLVGM------YGACGKILD-ARLMFDKMSYRDIVPWSVMID 191
+HG + SD FV + L+ + + +L A +F ++ ++ ++++I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 192 GYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVAL 251
+ + + +M S + PD + ++ A S + GE H I+
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 252 DAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMV 311
D +++++L+ MYANCG + A +F ++ +++V T+MV+GY + G VE+AR +FD+M
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 312 EKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQR 371
++L WS MI+GYA+NN ++A+ LF M+ G+ ++ M+SVIS+CAHLG L+ +R
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 372 IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGD 431
+ Y+ K+ +L + A++DM+ +CG +E A VFE + + +SW+S+I A+HG
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 432 ARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYG 491
A A+ +F++M P VTF VL ACSH GLV++G EI+ +M ++ I P+ EHYG
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 492 CMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPD 551
C+VD+ GRA L EA + M PN I G+L+ AC+++ E+AE L+++ P+
Sbjct: 391 CIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPE 450
Query: 552 HDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEF-LTADRSHK 610
H G VLLSNIYA +W + LR MKE+ + K S IE++ ++ +F + D+ H
Sbjct: 451 HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHP 510
Query: 611 QTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKD 670
+ +I K E++ +++ GY + A D+++EEK I HSEKLA+ YG++ +K
Sbjct: 511 EMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPG 570
Query: 671 SCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ IRIVKNLRVCEDCH KL+S+VY RE+++RDR RFHH+++GVCSC+DYW
Sbjct: 571 TTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 207/447 (46%), Gaps = 71/447 (15%)
Query: 1 MSTLSQPTKPLTLPTSTAISSCSSLTHMKQTHAQILK---LSHSHHSQNSLLLKLLLTSF 57
MS + T P + SCSS + +K H +L+ +S + L L + ++F
Sbjct: 1 MSNIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTF 60
Query: 58 SLPTTTPSSLYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDR 117
+ PT L YA IFSQI P V N IR S P A + +ML + D
Sbjct: 61 NKPTNL---LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 118 FSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDK 177
+FP ++KA + E +L G Q H + GF +D +V+ LV MY CG I A +F +
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 178 MSYRDIV-------------------------------PWSVMIDGYFQNGLFDEVLNLF 206
M +RD+V WS+MI+GY +N F++ ++LF
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 207 EEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANC 266
E MK V +E V+ ++S+C+ G L +GE +E+++ +++ ++ L + L+ M+ C
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 267 GCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYA 326
G +E A +F+ + E D + WS++I G A
Sbjct: 298 -------------------------------GDIEKAIHVFEGLPETDSLSWSSIIKGLA 326
Query: 327 ENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLR 386
+ H +A+ F++M G P VT +V+SAC+H G++++ I+ + K+ G + R
Sbjct: 327 VHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD-HGIEPR 385
Query: 387 VNN--AIIDMYAKCGSLESAREVFERM 411
+ + I+DM + G L A +M
Sbjct: 386 LEHYGCIVDMLGRAGKLAEAENFILKM 412
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/654 (34%), Positives = 361/654 (55%), Gaps = 32/654 (4%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIAR 129
A +F +IP S N I ++ +FLKM G F+F +LKA+
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 130 AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVM 189
G Q+H L GF D V ++ Y ++L+ R++FD+M D V ++V+
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 190 IDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNV 249
I Y Q ++ L+ F EM+ + + +LS + +L G +H +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 250 ALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQ 309
H+ ++L+ MYA C E+A LIF
Sbjct: 383 DSILHVGNSLVDMYAKCE-------------------------------MFEEAELIFKS 411
Query: 310 MVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQA 369
+ ++ + W+A+ISGY + LKLF +M+ ++ D+ T +V+ A A L
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 370 QRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIH 429
+++H +I ++ ++ + ++DMYAKCGS++ A +VFE M RN +SW ++I+A A +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 430 GDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEH 489
GD A+ F KM + + P+ V+ +GVL ACSH G V++G E F +M+ Y I PK +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 490 YGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLD 549
Y CM+DL GR EA +L++ MPF P+ ++W S++ ACR+H LAE AA++L ++
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 550 PDHD-GALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRS 608
D A V +SNIYA W+ V +++K+M+ERGI K A S +E+N++++ F + D++
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT 711
Query: 609 HKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSK 668
H D+I K+NE+ +E++ GY PD S + D++++ K E + +HSE+LA+ + LIS+
Sbjct: 712 HPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTP 771
Query: 669 KDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+ I ++KNLR C DCH IKL+SK+ REI +RD +RFHH+ +GVCSC DYW
Sbjct: 772 EGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 224/491 (45%), Gaps = 42/491 (8%)
Query: 79 APPSRVSNKFIRAISWSHRPKH---ALKVFLKMLNEGLTI--DRFSFPPILKAIARAEGL 133
A P R + + W R H A K+F +M D +F +L A
Sbjct: 104 AMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQ 163
Query: 134 LEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACG-KILD-ARLMFDKMSYRDIVPWSVMID 191
QVH KLGF ++PF+ V + C + LD A ++F+++ +D V ++ +I
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 192 GYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVAL 251
GY ++GL+ E ++LF +M+ S +P + S +L A + + G+ +H + +
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 252 DAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMV 311
DA + + ++ Y+ + + LFD++ + V ++S YS+A Q E
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYE---------- 333
Query: 312 EKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQR 371
+L F EMQ G +++S A+L L ++
Sbjct: 334 ---------------------ASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 372 IHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGD 431
+H L V N+++DMYAKC E A +F+ + +R +SWT++I+ + G
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 432 ARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYG 491
L F KM+ ++ + TF VL A + + G+++ A + N+ + G
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 492 CMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQ--LD 549
+VD++ + +++A+++ E MP N V W +L++A +G+ E A A ++++ L
Sbjct: 493 -LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 550 PDHDGALVLLS 560
PD L +L+
Sbjct: 551 PDSVSILGVLT 561
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 35/366 (9%)
Query: 166 GKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSN--VEPDEMVLSK 223
G + AR +FD M R +V W++++ Y +N FDE LF +M S+ PD + +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 224 ILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKN 283
+L C+ A + VH F + K FD
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAV---------------------------KLGFDTNPF-- 183
Query: 284 LVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQV 343
L VS ++ Y +++ A ++F+++ EKD + ++ +I+GY ++ E++ LF +M+
Sbjct: 184 LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ 243
Query: 344 CGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLES 403
G +P T V+ A L Q++H F D V N I+D Y+K +
Sbjct: 244 SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE 303
Query: 404 AREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSH 463
R +F+ M + +S+ +I++++ +L FF +M+ D F +L ++
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 464 AGLVDEGREIFASMTNEYNIPPKYEHYG-CMVDLFGRANLLREALELVETMPFAPNVVIW 522
+ GR++ H G +VD++ + + EA + +++P V W
Sbjct: 364 LSSLQMGRQLHCQAL--LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSW 420
Query: 523 GSLMAA 528
+L++
Sbjct: 421 TALISG 426
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/587 (38%), Positives = 346/587 (58%), Gaps = 33/587 (5%)
Query: 138 QVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNG 197
++H + + GF + T L+ G + AR +FD+M I W+ + GY +N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 198 LFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQS 257
L E L L+++M+ V PDE ++ A S+ G+ S G A+H ++
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF-------- 140
Query: 258 TLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLIC 317
GC+ +V+T +V Y + G++ A +F+ M KDL+
Sbjct: 141 ---------GCLG--------------IVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 318 WSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYID 377
W+A ++ + + AL+ FN+M ++ D T++S++SAC LG L+ + I+
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 378 KNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALI 437
K ++ V NA +DM+ KCG+ E+AR +FE M++RNV+SW++MI +A++GD+R AL
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297
Query: 438 FFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASM--TNEYNIPPKYEHYGCMVD 495
F M++E + PN VTF+GVL ACSHAGLV+EG+ F+ M +N+ N+ P+ EHY CMVD
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 496 LFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGA 555
L GR+ LL EA E ++ MP P+ IWG+L+ AC VH ++ L + A L++ PD
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417
Query: 556 LVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQI 615
VLLSNIYA +W V ++R M++ G K A S +E +++ F D+SH Q+ I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Query: 616 YEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRI 675
YEKL+E++ +++ GYVPD S D+E EEK + HSEKLA+ +GLI + IR+
Sbjct: 478 YEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRV 537
Query: 676 VKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
+KNLR C+DCH F K VS + + EI++RD+ RFHH+++GVCSCK++W
Sbjct: 538 MKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 194/416 (46%), Gaps = 42/416 (10%)
Query: 20 SSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQIPA 79
+S S +K+ HA +L+ S +NSLL +LL + YA +F ++
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSE--KNSLLTQLLEN-----LVVIGDMCYARQVFDEMHK 71
Query: 80 PPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQV 139
P + N + + P +L ++ KM + G+ D F++P ++KAI++ G +
Sbjct: 72 PRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL 131
Query: 140 HGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLF 199
H K GFG V T LV MY G++ A +F+ M +D+V W+ + Q G
Sbjct: 132 HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS 191
Query: 200 DEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTL 259
L F +M V+ D + +LSAC + G+L GE +++ + + +++
Sbjct: 192 AIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENAR 251
Query: 260 ITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWS 319
+ M+ CG + A+ LF+++ +N+V + M+ GY
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGY------------------------- 286
Query: 320 AMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQR-IHLYIDK 378
A N +EAL LF MQ G++P+ VT L V+SAC+H G++++ +R L +
Sbjct: 287 ------AMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 379 NAFGGDLRVNN--AIIDMYAKCGSLESAREVFERMR-RRNVISWTSMINAFAIHGD 431
N + R + ++D+ + G LE A E ++M + W +++ A A+H D
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRD 396
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 368 QAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFA 427
Q ++IH + + F + +++ G + AR+VF+ M + + W ++ +
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 428 IHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKY 487
+ +L+ + KM+D + P+ T+ V+ A S G G + A + KY
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV-------KY 138
Query: 488 EHYGC-------MVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELA 538
+GC +V ++ + L A L E+M ++V W + +A C G +A
Sbjct: 139 -GFGCLGIVATELVMMYMKFGELSSAEFLFESMQ-VKDLVAWNAFLAVCVQTGNSAIA 194
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 350/600 (58%), Gaps = 31/600 (5%)
Query: 123 ILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRD 182
IL+ AR ++E HG ++ D + L+ Y CG + AR +FD M R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 183 IVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHE 242
+V W+ MI Y +N + E L++F EM+ + E +S +LSAC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG------------- 173
Query: 243 FIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVED 302
V DA L+ + + C+D+ NL V TA++ Y++ G ++D
Sbjct: 174 ------VNCDA-LECKKLHCLSVKTCIDL-----------NLYVGTALLDLYAKCGMIKD 215
Query: 303 ARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAH 362
A +F+ M +K + WS+M++GY +N + +EAL L+ Q ++ ++ T+ SVI AC++
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 363 LGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSM 422
L L + +++H I K+ FG ++ V ++ +DMYAKCGSL + +F ++ +N+ W ++
Sbjct: 276 LAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 423 INAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYN 482
I+ FA H + +I F KM+ + + PN VTF +L C H GLV+EGR F M Y
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 395
Query: 483 IPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAA 542
+ P HY CMVD+ GRA LL EA EL++++PF P IWGSL+A+CRV+ +ELAE AA
Sbjct: 396 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAA 455
Query: 543 KQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEF 602
++L +L+P++ G VLLSNIYA +K+W+++ + RK +++ + K R S I++ ++V+ F
Sbjct: 456 EKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTF 515
Query: 603 LTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCY 662
+ H + +I L+ ++ + + GY P + L D+E +K E+++ HSEKLAL +
Sbjct: 516 SVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 575
Query: 663 GLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
GL+ + S +RI+KNLR+C DCH F+K S R I++RD RFHH+ DG CSC D+W
Sbjct: 576 GLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 154/328 (46%), Gaps = 34/328 (10%)
Query: 86 NKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTK 145
N I + + AL +FL+M NEG F+ +L A LE ++H L K
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 146 LGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNL 205
+ +V T L+ +Y CG I DA +F+ M + V WS M+ GY QN ++E L L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 206 FEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYAN 265
+ + ++E ++ LS ++ ACS L G+ +H I + + + S+ + MYA
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 266 CGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGY 325
CG + + +F +V KNL + ++SG +
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISG-------------------------------F 339
Query: 326 AENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDL 385
A++ P+E + LF +MQ GM P++VT S++S C H G++++ +R + + +G
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF-FKLMRTTYGLSP 398
Query: 386 RV--NNAIIDMYAKCGSLESAREVFERM 411
V + ++D+ + G L A E+ + +
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSI 426
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 87/168 (51%)
Query: 70 ALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIAR 129
A+ +F + S + + + + AL ++ + L ++F+ ++ A +
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 130 AEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVM 189
L+EG Q+H + K GFGS+ FV + V MY CG + ++ ++F ++ +++ W+ +
Sbjct: 276 LAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 190 IDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYG 237
I G+ ++ EV+ LFE+M+ + P+E+ S +LS C G + G
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 383
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 88/234 (37%), Gaps = 43/234 (18%)
Query: 16 STAISSCSSLTHM---KQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALS 72
S+ I +CS+L + KQ HA I K S N + + ++ SL +
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICK---SGFGSNVFVASSAVDMYA----KCGSLRESYI 319
Query: 73 IFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEG 132
IFS++ + N I + RPK + +F KM +G+ + +F +L
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 133 LLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDG 192
+ EG + L + +G P ++V +S M+D
Sbjct: 380 VEEGRRFFKL-MRTTYGLSP-----------------------------NVVHYSCMVDI 409
Query: 193 YFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246
+ GL E +E +K +P + +L++C NL E E + +
Sbjct: 410 LGRAGLLSEA---YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 460
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/636 (35%), Positives = 368/636 (57%), Gaps = 22/636 (3%)
Query: 18 AISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSSLYYALSIFSQI 77
A S C SL +Q ++ + + ++ NS++ L F L A S+F +
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQ--RNIYTWNSVVTGLTKLGF---------LDEADSLFRSM 112
Query: 78 PAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGM 137
P N + + R + AL F M EG ++ +SF +L A + + +G+
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 138 QVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNG 197
QVH L K F SD ++ + LV MY CG + DA+ +FD+M R++V W+ +I + QNG
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 198 LFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNN-VALDAHLQ 256
E L++F+ M S VEPDE+ L+ ++SAC+ + G+ VH ++ N+ + D L
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 257 STLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLI 316
+ + MYA C + A+ +FD + ++N++ T+M+SGY+ A + ARL+F +M E++++
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 317 CWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYI 376
W+A+I+GY +N +EAL LF ++ + P + +++ ACA L L + H+++
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 377 DKNAFG------GDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHG 430
K+ F D+ V N++IDMY KCG +E VF +M R+ +SW +MI FA +G
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 431 DARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHY 490
AL F +M + P+ +T IGVL AC HAG V+EGR F+SMT ++ + P +HY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 491 GCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDP 550
CMVDL GRA L EA ++E MP P+ VIWGSL+AAC+VH I L ++ A++LL+++P
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 551 DHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHK 610
+ G VLLSN+YA+ +W+DV +RKSM++ G+ K+ CS I++ + F+ D+SH
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHP 652
Query: 611 QTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEE 646
+ QI+ L+ +I+E++P H+ + L EE
Sbjct: 653 RKKQIHSLLDILIAEMRP----EQDHTEIGSLSSEE 684
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 182/335 (54%), Gaps = 5/335 (1%)
Query: 217 DEMVLSKILSACSRAG-NLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGL 275
D +K+L +C ++ + Y VH +I + + + +Q+ LI Y+ CG ++ + +
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 276 FDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEAL 335
FDK+ +N+ ++V+G ++ G +++A +F M E+D W++M+SG+A+++ +EAL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 336 KLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMY 395
F M G ++ + SV+SAC+ L +++ ++H I K+ F D+ + +A++DMY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 396 AKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFI 455
+KCG++ A+ VF+ M RNV+SW S+I F +G A AL F M + ++P+ VT
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 456 GVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMP- 514
V+ AC+ + G+E+ + + VD++ + + ++EA + ++MP
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 515 ---FAPNVVIWGSLMAACRVHGEIELAEFAAKQLL 546
A +I G MAA + + A + ++
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 186/405 (45%), Gaps = 77/405 (19%)
Query: 139 VHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGL 198
VH K GF ++ F+Q L+ Y CG + D R +FDKM R+I W+ ++ G + G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 199 FDEVLNLFEEM----------------------------KMSNVEP---DEMVLSKILSA 227
DE +LF M M + E +E + +LSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 228 CSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVS 287
CS +++ G VH I + D ++ S L+ MY+ CG ++ A+ +FD++ +N+V
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 288 TAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMK 347
++++ + + G +A +F M+E + +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRV-------------------------------E 250
Query: 348 PDKVTMLSVISACAHLGVLDQAQRIHLYIDKN-AFGGDLRVNNAIIDMYAKCGSLESARE 406
PD+VT+ SVISACA L + Q +H + KN D+ ++NA +DMYAKC ++ AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 407 VFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGL 466
+F+ M RNVI+ TSMI+ +A+ + A + F KM + ++ V++ ++ + G
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGE 366
Query: 467 VDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVE 511
+E +F + E P Y AN+L+ +L E
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSF----------ANILKACADLAE 401
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/613 (35%), Positives = 357/613 (58%), Gaps = 14/613 (2%)
Query: 14 PTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS---LYYA 70
P + + C L H+KQ AQ++ N L+L +S + S L Y+
Sbjct: 55 PLLSLLEKCKLLLHLKQIQAQMII--------NGLILDPFASSRLIAFCALSESRYLDYS 106
Query: 71 LSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLT---IDRFSFPPILKAI 127
+ I I P N IR S S PK + ++ +ML G D F++P + K
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 128 ARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWS 187
A G + G KL V + M+ +CG + +AR +FD+ RD+V W+
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWN 226
Query: 188 VMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDN 247
+I+GY + G ++ + +++ M+ V+PD++ + ++S+CS G+L+ G+ +E++ +N
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN 286
Query: 248 NVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIF 307
+ + L + L+ M++ CG + A+ +FD + + +V T M+SGY+R G ++ +R +F
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLF 346
Query: 308 DQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLD 367
D M EKD++ W+AMI G + Q+AL LF EMQ KPD++TM+ +SAC+ LG LD
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 368 QAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFA 427
IH YI+K + ++ + +++DMYAKCG++ A VF ++ RN +++T++I A
Sbjct: 407 VGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLA 466
Query: 428 IHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKY 487
+HGDA A+ +FN+M D I P+ +TFIG+L AC H G++ GR+ F+ M + +N+ P+
Sbjct: 467 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 488 EHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQ 547
+HY MVDL GRA LL EA L+E+MP + +WG+L+ CR+HG +EL E AAK+LL+
Sbjct: 527 KHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE 586
Query: 548 LDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADR 607
LDP G VLL +Y + W+D R+ M ERG+ K CS IE+N V EF+ D+
Sbjct: 587 LDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDK 646
Query: 608 SHKQTDQIYEKLN 620
S ++++IY++L+
Sbjct: 647 SRPESEKIYDRLH 659
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/635 (34%), Positives = 346/635 (54%), Gaps = 63/635 (9%)
Query: 120 FPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGA--------------- 164
F P +++ + L G Q+H L GF SD F+ L+ MY
Sbjct: 47 FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMR 106
Query: 165 ----------------CGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEE 208
G +++AR +FD+M R + W+ MI G Q +E L+LF E
Sbjct: 107 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 166
Query: 209 MKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGC 268
M PDE L + S + ++S G+ +H + I + LD
Sbjct: 167 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD---------------- 210
Query: 269 MDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAEN 328
LVV++++ Y R G+++D ++ M ++L+ W+ +I G A+N
Sbjct: 211 ---------------LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 255
Query: 329 NHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVN 388
P+ L L+ M++ G +P+K+T ++V+S+C+ L + Q Q+IH K + V
Sbjct: 256 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 315
Query: 389 NAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDES-I 447
+++I MY+KCG L A + F + + W+SMI+A+ HG A+ FN M +++ +
Sbjct: 316 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 375
Query: 448 DPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREAL 507
+ N V F+ +LYACSH+GL D+G E+F M +Y P +HY C+VDL GRA L +A
Sbjct: 376 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 435
Query: 508 ELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDK 567
++ +MP ++VIW +L++AC +H E+A+ K++LQ+DP+ VLL+N++A K
Sbjct: 436 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 495
Query: 568 RWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELK 627
RW+DV E+RKSM+++ + KE S E EV++F DRS ++ +IY L E+ E+K
Sbjct: 496 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 555
Query: 628 PAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHN 687
GY PD S L D+++EEK ++ HSEKLA+ + L+ + + IRI+KNLRVC DCH
Sbjct: 556 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 615
Query: 688 FIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722
K +S + REI +RD +RFHH+ +G CSC DYW
Sbjct: 616 AFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 172/343 (50%), Gaps = 7/343 (2%)
Query: 206 FEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYAN 265
F+ ++ N+ + + + + +C+ +L G+ +H ++ + + D + + L++MY+
Sbjct: 33 FQRFRL-NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSK 91
Query: 266 CGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGY 325
G A ++ ++ KN + S +++GY RAG + +AR +FD+M ++ L W+AMI+G
Sbjct: 92 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 151
Query: 326 AENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDL 385
+ +E L LF EM G PD+ T+ SV S A L + Q+IH Y K DL
Sbjct: 152 IQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDL 211
Query: 386 RVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDE 445
VN+++ MY + G L+ V M RN+++W ++I A +G L + MK
Sbjct: 212 VVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS 271
Query: 446 SIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLRE 505
PN +TF+ VL +CS + +G++I A + ++ ++ + L +
Sbjct: 272 GCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI-KIGASSVVAVVSSLISMYSKCGCLGD 330
Query: 506 ALELVETMPFAPNVVIWGSLMAACRVHGE----IELAEFAAKQ 544
A + + V+W S+++A HG+ IEL A+Q
Sbjct: 331 AAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 372
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 177/386 (45%), Gaps = 34/386 (8%)
Query: 67 LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126
L A +F ++P N I + + L +F +M G + D ++ +
Sbjct: 126 LVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG 185
Query: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPW 186
A + G Q+HG K G D V + L MY GK+ D ++ M R++V W
Sbjct: 186 SAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAW 245
Query: 187 SVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246
+ +I G QNG + VL L++ MK+S P+++ +LS+CS G+ +H I
Sbjct: 246 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 305
Query: 247 NNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLI 306
+ + S+LI+MY+ CGC+ A F + ++ V+ ++M+S Y GQ ++A +
Sbjct: 306 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 365
Query: 307 FDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVL 366
F+ M E+ M+ ++V L+++ AC+H G+
Sbjct: 366 FNTMAEQT------------------------------NMEINEVAFLNLLYACSHSGLK 395
Query: 367 DQA-QRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMR-RRNVISWTSMIN 424
D+ + + ++K F L+ ++D+ + G L+ A + M + +++ W ++++
Sbjct: 396 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 455
Query: 425 AFAIHGDARNALIFFNKMKDESIDPN 450
A IH +A A F ++ IDPN
Sbjct: 456 ACNIHKNAEMAQRVFKEILQ--IDPN 479
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 260,199,522
Number of Sequences: 539616
Number of extensions: 10792765
Number of successful extensions: 37005
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 28303
Number of HSP's gapped (non-prelim): 2265
length of query: 722
length of database: 191,569,459
effective HSP length: 125
effective length of query: 597
effective length of database: 124,117,459
effective search space: 74098123023
effective search space used: 74098123023
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)