Your job contains 1 sequence.
>004939
MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ
QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI
ARRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHM
LQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELL
VVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLV
QQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN
KAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKK
LARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQ
NAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQ
CNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK
YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAA
LVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRY
LA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004939
(722 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 3301 0. 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 1486 2.6e-261 2
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 2192 3.9e-227 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 974 1.1e-122 2
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 723 4.6e-103 2
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 687 8.4e-102 2
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 688 1.8e-101 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 688 1.8e-101 2
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 688 2.2e-101 2
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 687 2.2e-101 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 689 4.6e-101 2
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 685 4.6e-101 2
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 685 4.6e-101 2
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 685 4.6e-101 2
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 684 5.9e-101 2
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 682 9.6e-101 2
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 976 2.8e-98 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 859 6.1e-95 2
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 942 1.1e-94 1
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 941 1.4e-94 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 939 2.3e-94 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 939 2.3e-94 1
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 939 2.3e-94 1
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 937 3.8e-94 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 935 6.1e-94 1
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 818 1.3e-93 3
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 931 1.6e-93 1
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 927 4.3e-93 1
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 880 3.4e-92 2
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 918 3.9e-92 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 916 6.3e-92 1
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 854 1.9e-91 2
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 854 1.9e-91 2
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 854 1.9e-91 2
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 854 1.9e-91 2
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 854 1.9e-91 2
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 854 1.9e-91 2
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 848 8.0e-91 2
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 905 9.3e-91 1
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 900 3.1e-90 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 840 5.6e-90 2
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 893 1.7e-89 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 776 9.1e-88 2
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 874 1.8e-87 1
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 517 1.6e-86 2
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 601 4.4e-86 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 601 4.4e-86 2
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 853 3.0e-85 1
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 534 4.0e-85 2
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 804 5.7e-84 2
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 826 2.2e-82 1
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 766 1.9e-81 2
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 765 2.5e-81 2
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 764 4.0e-81 2
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 754 1.2e-79 2
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 745 4.1e-79 2
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 647 6.6e-79 2
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 748 1.7e-78 2
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 765 7.5e-78 2
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 781 1.3e-77 1
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 437 2.6e-77 3
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 769 2.4e-76 1
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 752 1.5e-74 1
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 691 5.3e-73 2
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 723 1.8e-71 1
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 701 3.8e-69 1
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 699 6.3e-69 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 663 8.7e-69 2
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 665 9.8e-68 2
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 622 2.9e-66 2
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 663 4.1e-65 1
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 417 3.9e-64 2
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 596 1.8e-62 2
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 638 1.8e-62 1
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 636 3.0e-62 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 634 4.8e-62 1
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 419 1.2e-61 2
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 419 1.2e-61 2
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 629 1.6e-61 1
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 533 2.6e-61 2
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 533 2.6e-61 2
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 611 1.3e-59 1
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 346 1.2e-57 2
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 567 1.6e-57 2
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 583 1.2e-56 1
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 439 4.0e-51 3
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 439 6.5e-51 3
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 439 6.5e-51 3
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 437 1.2e-50 3
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 437 1.2e-50 3
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 440 1.5e-50 3
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 439 1.3e-49 3
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 439 1.3e-49 3
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 418 8.3e-47 3
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 445 8.7e-47 2
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 345 2.3e-43 3
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 468 1.7e-42 2
UNIPROTKB|F1SR60 - symbol:F1SR60 "Uncharacterized protein... 337 2.8e-40 2
CGD|CAL0005748 - symbol:orf19.7497 species:5476 "Candida ... 186 1.3e-36 4
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 329 1.8e-36 3
WARNING: Descriptions of 24 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 3301 (1167.1 bits), Expect = 0., P = 0.
Identities = 629/738 (85%), Positives = 684/738 (92%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
M+RKTIDL+QGWDYMQ GITKLKRILEGL E F SE+YMMLYTTIYNMCTQKPPHDYSQ
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQ 60
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
QLYDKY++AFEEYI+S VLP+L EKHDE+MLREL KRW+NHKVMVRWLSRFF+YLDRYFI
Sbjct: 61 QLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFI 120
Query: 121 ARRSLPALNEVGLTCFREQI----------------DKEREGEQIDRALLKNVLDIFVEI 164
ARRSLP LNEVGLTCFR+ + DKEREGEQIDRALLKNVLDI+VEI
Sbjct: 121 ARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEI 180
Query: 165 GMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLH 224
GMGQM+ YE+DFE MLQDT +YYSRKAS+WI EDSCP+YM+K+EECLKKER+RV+HYLH
Sbjct: 181 GMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLH 240
Query: 225 SSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPV 284
SSSEPKLVEKVQHELLVV+A++LLEKE SGCRALLR+DKV+DLSRMYRLYHKI +GLEPV
Sbjct: 241 SSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPV 300
Query: 285 ANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINH 344
AN+FKQH+TAEG LVQQAED ATNQ ++ +VQEQVLIRK+IELHDKYM YVT CF NH
Sbjct: 301 ANIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNH 360
Query: 345 TLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 404
TLFHKALKEAFEIFCNK V GSSS+ELLATFCDNILKKGG+EKLSDEAIE+TLEKVVKLL
Sbjct: 361 TLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLL 420
Query: 405 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 464
AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL
Sbjct: 421 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 480
Query: 465 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 524
ARENQ SFE+YL +N A+PGIDL+VTVLTTGFWPSYKS D+NLPSEM+KCVEVFKGFYE
Sbjct: 481 ARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYE 540
Query: 525 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 584
TKTKHRKLTWIYSLG C+INGKF+QK IELIVSTYQAA LLLFNT+D+LSY+EI+ QLNL
Sbjct: 541 TKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNL 600
Query: 585 THDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKK 644
+H+DLVRLLHSLSCAKYKILLKEPNTKT+SQ+D FEFNSKFTDRMRRIKIPLPPVDERKK
Sbjct: 601 SHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKK 660
Query: 645 IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
+VEDVDKDRRYAIDAA+VRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT
Sbjct: 661 VVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 720
Query: 705 RDYLERDKENPNMFRYLA 722
RDYLERDKENPNMFRYLA
Sbjct: 721 RDYLERDKENPNMFRYLA 738
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 1486 (528.2 bits), Expect = 2.6e-261, Sum P(2) = 2.6e-261
Identities = 287/447 (64%), Positives = 350/447 (78%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
M ++ I L++GW M+ G+ KL+RILE L E PF +Y+ LYT IY+MC Q+PP+DYSQ
Sbjct: 10 MMKELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQ 69
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY+KY+ + Y VLPS+ E+H EYMLRELVKRWANHK++VRWLSRF YLDR+++
Sbjct: 70 ELYNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFYV 129
Query: 121 ARRSLPALNEVGLTCFREQ----------------IDKEREGEQIDRALLKNVLDIFVEI 164
ARR LP LN+VG T F + I KEREGEQIDR L+KNV+D++
Sbjct: 130 ARRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGN 189
Query: 165 GMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLH 224
G+GQM YE+DFE +LQDT +YYSRKAS W EDSCP+YM+KAEECLK E++RV++YLH
Sbjct: 190 GVGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLH 249
Query: 225 SSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPV 284
S++EPKLVEKVQ+ELLVV A +L+E E SGC ALLR+DK+ DLSRMYRLY IP+GLEP+
Sbjct: 250 STTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPI 309
Query: 285 ANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINH 344
A++FKQH+TAEG L++QA DAATNQ S+ QVL+RK IELHDKYM YV CF H
Sbjct: 310 ADLFKQHVTAEGNALIKQAADAATNQDASAS----QVLVRKEIELHDKYMVYVDECFQKH 365
Query: 345 TLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK-KGGNEKLSDEAIEETLEKVVKL 403
+LFHK LKEAFE+FCNK V G+SS+E+LAT+CDNILK +GG+EKLSDEA E TLEKVV L
Sbjct: 366 SLFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNL 425
Query: 404 LAYISDKDLFAEFYRKKLARRLLFDRS 430
L YISDKDLFAEFYRKK ARRLLFDRS
Sbjct: 426 LVYISDKDLFAEFYRKKQARRLLFDRS 452
Score = 1052 (375.4 bits), Expect = 2.6e-261, Sum P(2) = 2.6e-261
Identities = 199/264 (75%), Positives = 232/264 (87%)
Query: 459 VTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 518
VTD+TLARE QT+F +YLS N GID +VTVLTTGFWPSYK++DLNLP+EMV CVE
Sbjct: 458 VTDITLARELQTNFVDYLSANMTTKLGIDFTVTVLTTGFWPSYKTTDLNLPTEMVNCVEA 517
Query: 519 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 578
FK FY TKT R+L+WIYSLG C+I GKFE+K +EL+VSTYQAA LLLFN ++RLSY+EI
Sbjct: 518 FKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEI 577
Query: 579 MTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPP 638
QLNL+H+DLVRLLHSLSC KYKIL+KEP ++TIS++D FEFNSKFTD+MR+I++PLPP
Sbjct: 578 SEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPP 637
Query: 639 VDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKR 698
+DERKK+VEDVDKDRRYAIDAALVRIMKSRKVL HQQLVSECVE LS+MFKPDIK IKKR
Sbjct: 638 MDERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKR 697
Query: 699 MEDLITRDYLERDKENPNMFRYLA 722
+EDLI RDYLERD EN N F+Y+A
Sbjct: 698 IEDLINRDYLERDTENANTFKYVA 721
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 2192 (776.7 bits), Expect = 3.9e-227, P = 3.9e-227
Identities = 424/643 (65%), Positives = 523/643 (81%)
Query: 92 RELVKRWANHKVMVRWLSRFFHYLDRY-------FIARRSL--PALNEVGLTCFREQIDK 142
++++ RW +H +L RF+ + FI+ R L L I K
Sbjct: 102 QKILVRWLSH--FFEYLDRFYTRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHK 159
Query: 143 EREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCP 202
EREGEQIDRALLKNV+D++ GMG++ YE+DFE +L+D+ +YYSR AS W E+SCP
Sbjct: 160 EREGEQIDRALLKNVIDVYCGNGMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCP 219
Query: 203 EYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLRED 262
+YMIKAEE L+ E++RV++YLHS++EPKLV KVQ+ELLVV A +L+E E SGCRALLR+D
Sbjct: 220 DYMIKAEESLRLEKERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDD 279
Query: 263 KVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGS-SGA-VQEQ 320
K++DL+RMYRLYH IP+GL+PVA++FKQHIT EG+ L++QA +AAT++ S SG VQ+Q
Sbjct: 280 KMDDLARMYRLYHPIPQGLDPVADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQDQ 339
Query: 321 VLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNIL 380
VLIR++I+LHDK+M YV CF H+LFHKALKEAFE+FCNK V G SS+E+LAT+CDNIL
Sbjct: 340 VLIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNIL 399
Query: 381 KKGGN-EKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSI 439
K GG EKL +E +E TLEKVVKLL YISDKDLFAEF+RKK ARRLLFDR+ ND HERS+
Sbjct: 400 KTGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHERSL 459
Query: 440 LTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP 499
LTK K+ G QFTSKMEGM+TD+TLA+E+QT+F E+LS N+ G+D +VTVLTTGFWP
Sbjct: 460 LTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWP 519
Query: 500 SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTY 559
SYK++DLNLP EMV CVE FK +Y TKT R+L+WIYSLG C + GKF++K IE++V+TY
Sbjct: 520 SYKTTDLNLPIEMVNCVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTY 579
Query: 560 QAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHF 619
QAA LLLFN ++RLSY+EI+ QLNL H+DL RLLHSLSC KYKIL+KEP ++ IS +D F
Sbjct: 580 QAAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTF 639
Query: 620 EFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSE 679
EFNSKFTD+MRRI++PLPP+DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSE
Sbjct: 640 EFNSKFTDKMRRIRVPLPPMDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSE 699
Query: 680 CVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
CVE LS+MFKPDIK IKKR+EDLI+RDYLERD +NPN F+YLA
Sbjct: 700 CVEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDNPNTFKYLA 742
Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
Identities = 189/337 (56%), Positives = 252/337 (74%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLP-ESPFSSEEYMMLYTTIYNMCTQKPPHDYS 59
M +K L+ GW M+ G+ KL++ILE +P E PF + M LYTT++N+CTQKPP+DYS
Sbjct: 1 MAKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYS 60
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYF 119
QQ+YD+Y + +Y VLP++ EKH EYMLRELVKRWAN K++VRWLS FF YLDR++
Sbjct: 61 QQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFY 120
Query: 120 IARRSLPALNEVGLTCFREQ----------------IDKEREGEQIDRALLKNVLDIFVE 163
R S P L+ VG FR+ I KEREGEQIDRALLKNV+D++
Sbjct: 121 TRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCG 180
Query: 164 IGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYL 223
GMG++ YE+DFE +L+D+ +YYSR AS W E+SCP+YMIKAEE L+ E++RV++YL
Sbjct: 181 NGMGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYL 240
Query: 224 HSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEP 283
HS++EPKLV KVQ+ELLVV A +L+E E SGCRALLR+DK++DL+RMYRLYH IP+GL+P
Sbjct: 241 HSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDP 300
Query: 284 VANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQ 320
VA++FKQHIT EG+ L++QA +AAT++ S+ ++ Q
Sbjct: 301 VADLFKQHITVEGSALIKQATEAATDKAASTSGLKVQ 337
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 974 (347.9 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 220/617 (35%), Positives = 352/617 (57%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
D+ ++ LK + + + S+ + LY YNM QK + LY+ K+ ++
Sbjct: 24 DFPKRTWKLLKTAMRQIHQQNASNLSFEELYRNGYNMVLQK----HGDLLYNNLKKMVDK 79
Query: 73 YISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVG 132
++ + V ++SE DE L EL W NHK + + Y+DR ++ + +L ++ ++G
Sbjct: 80 HLKA-VAKTVSESIDEKFLLELNSSWINHKTSMLMIRDILMYMDRNYVKQNNLSSVFDLG 138
Query: 133 LTCFREQI------------------DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEK 174
L FR+ + KEREGE IDR L+KN++ + +++G+ + Y +
Sbjct: 139 LYLFRDNVAHCSTIKDRLLNTLLSMVQKEREGEVIDRILIKNIVQMLIDLGVNSKNVYIE 198
Query: 175 DFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEK 234
DFE+ +L T ++Y ++ I SCP+YM K E CLK+E +RVSHYL SSSEPKL E
Sbjct: 199 DFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKLKEV 258
Query: 235 VQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITA 294
+ +L+ + L++ E SG ++L++DK+EDL RMY L+ ++ GL + +V ++
Sbjct: 259 CEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSYVKE 318
Query: 295 EGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEA 354
G +V E T + G+ + +++L DKY + N N F ++++A
Sbjct: 319 IGRGIVMDEEK--TKESGT--------YFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQA 368
Query: 355 FEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFA 414
FE F N S E ++ F D LKKG + +S+E ++ L+K++ L I +KD+F
Sbjct: 369 FEYFINL---NPKSPEYISLFIDEKLKKG-LKGVSEEEVDIILDKILMLFRLIQEKDVFE 424
Query: 415 EFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEE 474
++Y++ LA+RLL RS +DD ER+++ KLK +CG QFTSK+EGM TD+ L+++ + F+
Sbjct: 425 KYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSGFKT 484
Query: 475 YLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
Y+ N + A P IDL+V VLTTGFWP+ +++ NLP E++ C E FK +Y + R L W
Sbjct: 485 YIQNLKKALP-IDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSNHNGRLLLW 543
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLH 594
++G I F K+ EL VS+YQ LLLFN +L++ EI Q + DL R L
Sbjct: 544 QTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLL 603
Query: 595 SLSCAKYKILLKE-PNT 610
+L+ K KIL +E P+T
Sbjct: 604 ALTNPKNKILDRELPST 620
Score = 253 (94.1 bits), Expect = 1.1e-122, Sum P(2) = 1.1e-122
Identities = 52/118 (44%), Positives = 81/118 (68%)
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPL-----PPVDERKKIVEDVDKDRRYAIDAALVRI 664
+K+I +SD F FN+KF ++ R+K+ PV+E K+ + VD+DR++ I+A++VRI
Sbjct: 653 SKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEE-KETRDKVDEDRKHQIEASIVRI 711
Query: 665 MKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
MK+RK L H LVSE ++QL F P+ +KKR+E LI R+YLER K++ ++ Y+A
Sbjct: 712 MKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 723 (259.6 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 161/572 (28%), Positives = 305/572 (53%)
Query: 3 RKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQL 62
R+ + Y++ LK ++ + + S + LY YNM H + +L
Sbjct: 177 RRAFNASMDEKYVETIWASLKNAIQEIQKKNNSGLSFEQLYRNAYNMVL----HKHGNRL 232
Query: 63 YDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIAR 122
Y ++ E++ V + E L +L + W +H+ + + Y+DR ++ +
Sbjct: 233 YYGLREVVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDILMYMDRVYVQQ 292
Query: 123 RSLPALNEVGLTCFREQI-----------DK-------EREGEQIDRALLKNVLDIFVEI 164
R + + +GL FR+Q+ +K ER GE I+ +KN + + +
Sbjct: 293 REVDNVYNLGLILFRDQVVRYSEIQKALREKLLGMVMEERHGEAINHLAIKNACSMLITL 352
Query: 165 GMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLH 224
G+ YE+DFE+ L + A+Y ++ N++ E++ Y+ K E + +E R + YL
Sbjct: 353 GINSRTVYEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYLD 412
Query: 225 SSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPK-GLEP 283
+EP++V V+ EL+ + ++E E SG +++ K EDL+ Y+L+ ++ + GL+
Sbjct: 413 KDTEPRIVRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLKEEGLKV 472
Query: 284 VANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFIN 343
+A+ ++ +G +LV++ E+ TN ++ +++L D++ +++ + F N
Sbjct: 473 IADTMSAYLREQGRMLVKEEENGNTNP---------ITFVQNLLDLKDRFDQFLVHSFAN 523
Query: 344 HTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKL 403
+F + FE F N + S E L+ F D+ LKKGG + +S++ IE L+K + L
Sbjct: 524 DRIFKNVISSDFEHFLNL---NNKSPEYLSLFIDDKLKKGG-KGMSEQEIESILDKTMVL 579
Query: 404 LAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 463
++ +KD+F +Y+ LA+RLL ++S +DD E+++++KLK +CG QFTSK+EGM D++
Sbjct: 580 FRFLLEKDVFERYYKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMS 639
Query: 464 LARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSS-DLNLPSEMVKCVEVFKGF 522
++ F+ +++NN + G++L+V +LTTGFWP+ ++ + N+P+ + ++FK F
Sbjct: 640 VSNTIMDEFKNFVNNNNLSLGGVELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNF 699
Query: 523 YETKTKHRKLTWIYSLGQCNINGKFE-QKNIE 553
Y K R+LT +G IN F +K +E
Sbjct: 700 YLNKHSGRQLTLQPQMGTAYINAVFYGRKAVE 731
Score = 318 (117.0 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 78/183 (42%), Positives = 107/183 (58%)
Query: 549 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK--YKILLK 606
+K+I L VSTYQ LLLFN D L+Y +I + ++ +LVR L SLS K ++L++
Sbjct: 753 RKHI-LQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVR 811
Query: 607 EPNTKT--ISQSDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDA 659
TKT I +D F N F + R+KI ERK+ VD+DR++ I+A
Sbjct: 812 NSKTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRKHEIEA 871
Query: 660 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 719
A+VRIMK+RK L H LVS+ QL F P IKKR+E LI R+YL+R E+ ++
Sbjct: 872 AIVRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVYN 931
Query: 720 YLA 722
YLA
Sbjct: 932 YLA 934
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 687 (246.9 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSLYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFS 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 342 (125.4 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 77/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN D+ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 688 (247.2 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSLYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFS 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 338 (124.0 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 688 (247.2 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 163/566 (28%), Positives = 298/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 24 MDEKYVN--NIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 70
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 71 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 130
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 131 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 190
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 191 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVIHC 250
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 251 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 310
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 311 TMCECMSSYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 360
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 361 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMV 416
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 417 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 476
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L++ + G+DL V VLTTG+WP+ ++ N+P EVF+
Sbjct: 477 SISNTTMDEFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRR 536
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 537 FYLAKHSGRQLTLQHHMGSADLNATF 562
Score = 338 (124.0 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 77/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 575 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLA 633
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT R+ R+KI ERK+ + V
Sbjct: 634 CGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 754 RTPEDRKVYTYVA 766
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 688 (247.2 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 162/566 (28%), Positives = 298/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 3 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 49
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 50 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 109
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 110 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 169
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 170 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 229
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 230 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 289
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 290 TMCECMSSYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 339
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 340 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMV 395
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 396 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 455
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 456 SISNTTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 515
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 516 FYLAKHSGRQLTLQHHMGSADLNATF 541
Score = 337 (123.7 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 555 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 613
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 614 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 673
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 674 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 733
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 734 RTPEDRKVYTYVA 746
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 687 (246.9 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSLYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFS 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 338 (124.0 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 689 (247.6 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 164/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 23 MDEKYVN--NIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 69
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 70 KLYTGLREVVTEHLINKVREDVLHSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 129
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 130 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 189
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 190 VLGLKGRSVYEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 249
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 250 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVPNGLK 309
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 310 TMCECMSWYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 359
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 360 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMV 415
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 416 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 475
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F +L +Q + G+DL+V VLTTG+WP+ ++ N+P EVF+
Sbjct: 476 SISNTTMDEFRHHLQTSQVSLCGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRR 535
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 536 FYLAKHSGRQLTLQHHMGSADLNATF 561
Score = 333 (122.3 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 575 VGGALLTGSNTRKHI-LQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLA 633
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 634 CGKPTQRVLTKEPKSKEIESGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 754 RTPEDRKVYTYVA 766
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 685 (246.2 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSSYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 685 (246.2 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 7 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 53
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 54 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 113
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 114 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 173
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 174 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 233
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 234 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 293
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 294 TMCECMSSYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 343
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 344 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMV 399
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 400 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 459
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 460 SISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 519
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 520 FYLAKHSGRQLTLQHHMGSADLNATF 545
Score = 337 (123.7 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 559 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 617
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 618 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 677
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 678 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 737
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 738 RTPEDRKVYTYVA 750
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 685 (246.2 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSSYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 4.6e-101, Sum P(2) = 4.6e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 684 (245.8 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 162/566 (28%), Positives = 296/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSSYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLLESFN 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 682 (245.1 bits), Expect = 9.6e-101, Sum P(2) = 9.6e-101
Identities = 162/566 (28%), Positives = 297/566 (52%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 25 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 71
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 72 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 131
Query: 121 ARRSLPALNEVGLTCFREQI-------D-----------KEREGEQIDRALLKNVLDIFV 162
+ ++ + +GL FR+Q+ D +ER+GE +DR ++N + +
Sbjct: 132 QQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLM 191
Query: 163 EIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHY 222
+G+ YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H
Sbjct: 192 ILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHC 251
Query: 223 LHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLE 282
L S+E +V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+
Sbjct: 252 LDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLK 311
Query: 283 PVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ +G LV + +G V I+ +++L ++ ++ F
Sbjct: 312 TMCECMSCYLREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFN 361
Query: 343 NHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 402
N LF + + FE F N S S E L+ F D+ LKKG + L+++ +E L+K +
Sbjct: 362 NDRLFKQTIAGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMV 417
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D+
Sbjct: 418 LFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDM 477
Query: 463 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKG 521
+++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+
Sbjct: 478 SISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRR 537
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKF 547
FY K R+LT + +G ++N F
Sbjct: 538 FYLAKHSGRQLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 9.6e-101, Sum P(2) = 9.6e-101
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 245/733 (33%), Positives = 393/733 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 181 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 236
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ K W +H + + F +LDR ++ + S LP++ +
Sbjct: 237 HIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 296
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 297 MGLELFRTHIISDQKVQNKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 352
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV----EKVQHE 238
+ LE++ Y + + L +ER+ V YLH ++ +++ + Q
Sbjct: 353 D-SFEHRFLEETNRLYAAEGQR-LMQERE-VPEYLHHVNKRLEEEADRIITYLDQSTQKP 409
Query: 239 LLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHIT 293
L+ +LL + Q G LL E++++DLS +Y+L+ ++ G++ + + ++I
Sbjct: 410 LIATVEKQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIK 469
Query: 294 AEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKE 353
A G+ +V E +++ +++++++ DK + CF+ + F A+KE
Sbjct: 470 AFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKE 516
Query: 354 AFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLF 413
AFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F
Sbjct: 517 AFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVF 573
Query: 414 AEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFE 473
FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F+
Sbjct: 574 EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFK 633
Query: 474 EYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLT 533
+ NQN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 634 QQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 693
Query: 534 WIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLL 593
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R L
Sbjct: 694 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTL 753
Query: 594 HSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDV 649
SL+C K ++L K P K + D F N F ++ RIKI V+E+ E V
Sbjct: 754 QSLACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERV 813
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
+DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+E
Sbjct: 814 FQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYME 871
Query: 710 RDKENPNMFRYLA 722
RDKENPN + Y+A
Sbjct: 872 RDKENPNQYNYIA 884
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 859 (307.4 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 211/606 (34%), Positives = 336/606 (55%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQ-------MDSYEKDFEEHMLQDTGAYYSRKA 192
I+ ER G QI+ L+K V++ +V +G+ + + Y+ FEE L T YY+ ++
Sbjct: 180 IESERNGYQINTHLIKGVINGYVSLGLNREKPKETILQVYKSGFEELFLTATENYYTNES 239
Query: 193 SNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQ 252
+ +I E+S +YM K E L +E RV YLH ++E +L+ K + ++L+ E++ E
Sbjct: 240 AKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESELIAKCE-KVLIEKHVEVIWNE- 297
Query: 253 SGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGG 312
+ LL +DK+ DL+RMY L +IP+GLEP+ ++H+ G +Q ATN
Sbjct: 298 --FQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKHVQNVG---LQAVSSIATN--- 349
Query: 313 SSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK------AVGGS 366
G ++ +V I ++++ KY E VT F + T F +L +A F N+ A S
Sbjct: 350 --GVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASLDKACRRFINENAVTIAAKSSS 407
Query: 367 SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLL 426
S ELLA F D +LKK N E +E+ L V+ + YI DKD+F +FY K LA+RL+
Sbjct: 408 KSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLI 466
Query: 427 FDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGI 486
S ++D E +++ KLK CG ++TSK++ M TD++L+RE F ++ + + I
Sbjct: 467 HGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHIEQVERSSLNI 526
Query: 487 DLSVTVLTTGFWPSYK-SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNING 545
D SV VL TG WP S++ ++P E+ C ++F+ FY+ + RKL W++ L + +
Sbjct: 527 DFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGELKT 586
Query: 546 KFEQKN---IELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK 602
K+ Q + L STYQ LL FN + L+ EI L L L SL AK K
Sbjct: 587 KYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSL--AKSK 644
Query: 603 ILLKEP--NTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDK----DRRYA 656
ILL +P + + I+++ F N +F ++ +I I +P + + K+ ++ + K DR+
Sbjct: 645 ILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKTVEEDRKLQ 704
Query: 657 IDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPN 716
I AA+VRIMK RK L H L++E + QL F P + IKK ++ LI ++YL R + +
Sbjct: 705 IQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKKD 764
Query: 717 MFRYLA 722
+ Y+A
Sbjct: 765 HYSYVA 770
Score = 105 (42.0 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 3 RKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQK--------- 53
++++ LD W +++GI K I+ L + F ++++ LYT +Y+ C
Sbjct: 10 KRSVKLDDIWPELEEGIYK---IITDLNKG-FPKQKWIALYTHVYDYCAASQSKSSAKVG 65
Query: 54 -PPHDYS------QQLYDKYKQAFEEYISSMVLPSLSE-KHDEYMLRELVKRWANHKVMV 105
P S + LY++ ++++S ++ L+E K DE +L W + +
Sbjct: 66 MPKQQASGANYVGEDLYNRLNLFLKKHMSQLL--KLTETKMDEPLLNYYYTEWDRYTSAM 123
Query: 106 RWLSRFFHYLDRYFIAR 122
++++ F Y++RY+I R
Sbjct: 124 KYINNIFQYMNRYWIKR 140
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 244/725 (33%), Positives = 388/725 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 280 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 335
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ K W NH + + F +LDR ++ + S LP++ +
Sbjct: 336 HIKAQIHQFREDSLDSVLFLKKIDKCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 395
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 396 MGLELFRAHIISDQKVQNKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 451
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ LE++ Y + ++ L +ER+ V YLH ++ +L E+ L+ Y +
Sbjct: 452 DSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR--LITYLDQTT 505
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG--TVLVQQA 303
+K + LL E L + L + + + ++ ++ +++ G VL+QQ
Sbjct: 506 QKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQW 563
Query: 304 EDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK 361
+ G + +++ +++++++ DK + CF+ + F A+KEAFE F NK
Sbjct: 564 IEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK 623
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K L
Sbjct: 624 RP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 680
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N QN
Sbjct: 681 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QN 739
Query: 482 AHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL W +LG C
Sbjct: 740 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 799
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ EL VS +Q LL+FN + S EI + +L R L SL+C K
Sbjct: 800 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 859
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L K P K I D F N F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 860 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 919
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+ERDKENPN
Sbjct: 920 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQ 977
Query: 718 FRYLA 722
+ Y+A
Sbjct: 978 YNYIA 982
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 239/734 (32%), Positives = 395/734 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ H S +LY + + E+
Sbjct: 182 NYTNETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCS----HKISAKLYKQLRVVCED 237
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ K W +H + + F +LDR ++ + S LP++ +
Sbjct: 238 HIKAQIDQFREDALDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 297
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D + + + ID LL + G S + ML D Y
Sbjct: 298 MGLELFRFYIISDLKVQSKTIDGILLLIERE---RSGEAVDRSLLRSLLS-MLSDLQIYQ 353
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV----EKVQHE 238
+ LE++ Y + + L +ER+ V YLH ++ +++ + Q
Sbjct: 354 DSFEQRF-LEETNRLYAAEGQR-LMQERE-VPEYLHHVNKRLEEEADRVITYLDQSTQKS 410
Query: 239 LLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHIT 293
L+ +LL + Q G LL E++++DLS +Y+L+ ++ G++ + + ++I
Sbjct: 411 LIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIK 470
Query: 294 AEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKE 353
A G+ +V E +++ +++++++ DK + CF+ + F +KE
Sbjct: 471 AFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDVCFMKNEKFVNGMKE 517
Query: 354 AFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD-KDL 412
AFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I + KD+
Sbjct: 518 AFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYEGKDV 574
Query: 413 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 472
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 575 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQF 634
Query: 473 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 532
++++ QN I+L+V +LT G+WP+Y +++LP+EMV+ E+FK FY K RKL
Sbjct: 635 KQHMQC-QNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFYLGKHSGRKL 693
Query: 533 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 592
W +LG C + +F++ EL VS +Q LL+FN + S +I + +L R
Sbjct: 694 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIEDSELRRT 753
Query: 593 LHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVED 648
L SL+C K ++L K P +K + D F N F ++ RIKI V+E+ E
Sbjct: 754 LQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTER 813
Query: 649 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 708
V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+
Sbjct: 814 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 871
Query: 709 ERDKENPNMFRYLA 722
ERDKENPN + Y+A
Sbjct: 872 ERDKENPNQYNYVA 885
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 243/725 (33%), Positives = 388/725 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 198 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 253
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 254 HIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 313
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 314 MGLELFRAHIISDQKVQNKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 369
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ LE++ Y + ++ L +ER+ V YLH ++ +L E+ L+ Y +
Sbjct: 370 DSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR--LITYLDQTT 423
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG--TVLVQQA 303
+K + LL E L + L + + + ++ ++ +++ G VL+QQ
Sbjct: 424 QKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQW 481
Query: 304 EDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK 361
+ G + +++ +++++++ DK + CF+ + F A+KEAFE F NK
Sbjct: 482 IEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK 541
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K L
Sbjct: 542 RP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 598
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N QN
Sbjct: 599 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QN 657
Query: 482 AHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL W +LG C
Sbjct: 658 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 717
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ EL VS +Q LL+FN + S EI + +L R L SL+C K
Sbjct: 718 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 777
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L K P K I D F N F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 778 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 837
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+ERDKENPN
Sbjct: 838 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQ 895
Query: 718 FRYLA 722
+ Y+A
Sbjct: 896 YNYIA 900
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 243/725 (33%), Positives = 388/725 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 211 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 266
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 267 HIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 326
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 327 MGLELFRAHIISDQKVQNKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 382
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ LE++ Y + ++ L +ER+ V YLH ++ +L E+ L+ Y +
Sbjct: 383 DSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR--LITYLDQTT 436
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG--TVLVQQA 303
+K + LL E L + L + + + ++ ++ +++ G VL+QQ
Sbjct: 437 QKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQW 494
Query: 304 EDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK 361
+ G + +++ +++++++ DK + CF+ + F A+KEAFE F NK
Sbjct: 495 IEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK 554
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K L
Sbjct: 555 RP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 611
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N QN
Sbjct: 612 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QN 670
Query: 482 AHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL W +LG C
Sbjct: 671 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 730
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ EL VS +Q LL+FN + S EI + +L R L SL+C K
Sbjct: 731 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 790
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L K P K I D F N F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 791 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 850
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+ERDKENPN
Sbjct: 851 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQ 908
Query: 718 FRYLA 722
+ Y+A
Sbjct: 909 YNYIA 913
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 244/724 (33%), Positives = 385/724 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ H S LY + +Q E+
Sbjct: 268 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCS----HKISANLYKQLRQICED 323
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 324 HIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 383
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 384 MGLELFRAHIISDQKVQTKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 439
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ L+++ Y + ++ L +ER+ V YLH ++ +L E+ L+ Y +
Sbjct: 440 DSFEQQF-LQETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR--LITYLDQTT 493
Query: 249 EKE--QSGCRALLREDKVEDLSRMYR--LYHKIPKGLEPVANVFKQHITAEGTVLVQQAE 304
+K S + LL E L + L + L + +F + + VL+QQ
Sbjct: 494 QKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSR-VRGGVQVLLQQWI 552
Query: 305 DAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKA 362
+ G + +++ +++++++ DK + CF+ + F A+KEAFE F NK
Sbjct: 553 EYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKEAFETFINKR 612
Query: 363 VGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLA 422
+ +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K LA
Sbjct: 613 P--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLA 669
Query: 423 RRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 482
+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N QN
Sbjct: 670 KRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QNV 728
Query: 483 HPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCN 542
I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL W +LG C
Sbjct: 729 PGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCV 788
Query: 543 INGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK 602
+ +F++ EL VS +Q LL+FN + S EI + +L R L SL+C K +
Sbjct: 789 LKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRTLQSLACGKAR 848
Query: 603 ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAID 658
+L K P K I D F N F ++ RIKI V+E+ E V +DR+Y ID
Sbjct: 849 VLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQID 908
Query: 659 AALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMF 718
AA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+ERDKENPN +
Sbjct: 909 AAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQY 966
Query: 719 RYLA 722
Y+A
Sbjct: 967 NYIA 970
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 242/725 (33%), Positives = 383/725 (52%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y Q KL + + S LY + N+C+ H S LY + +QA E+
Sbjct: 57 NYTQDTWRKLHEAVRAVQSSTSIRYNLEELYQAVENLCS----HKVSPMLYKQLRQACED 112
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
++ + +LP + D + L+++ W +H + + F +LDR ++ + S LP++ +
Sbjct: 113 HVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPSIWD 172
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I DK + + ID LL I E +D ML D Y
Sbjct: 173 MGLELFRTHIISDKMVQSKTIDGILLL----IERERSGEAVDRSLLRSLLGMLSDLQVYK 228
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
++ E +C Y + + L +ER+ V YL+ S+ +L E + + ++ Y
Sbjct: 229 DSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVSK-RLEE--EGDRVITYLDHST 282
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG--TVLVQQA 303
+K C + LL E L + L H + + P +A +++ G L+Q
Sbjct: 283 QKPLIACVEKQLLGEHLTAILQK--GLDHLLDENRVPDLAQMYQLFSRVRGGQQALLQHW 340
Query: 304 EDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK 361
+ G + +++ +++ +++ DK + CF + F +KE+FE F NK
Sbjct: 341 SEYIKTFGTAIVINPEKDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMKESFETFINK 400
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A D+ L+ GN++ +DE +E TL+K++ L +I KD+F FY+K L
Sbjct: 401 RP--NKPAELIAKHVDSKLR-AGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDL 457
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++++ N +
Sbjct: 458 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSD 517
Query: 482 AHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
+ P IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RKL W +LG
Sbjct: 518 SGP-IDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHA 576
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ E VS +Q LL+FN D S+ EI + +L R L SL+C K
Sbjct: 577 VLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKA 636
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L+K P K + D F FN +F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 637 RVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQI 696
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK+NPN
Sbjct: 697 DAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQ 754
Query: 718 FRYLA 722
+ Y+A
Sbjct: 755 YHYVA 759
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 243/725 (33%), Positives = 387/725 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 263 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 318
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 319 HIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 378
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 379 MGLELFRAHIISDQKVQNKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 434
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ LE++ Y + ++ L +ER+ V YLH ++ +L E+ L+ Y +
Sbjct: 435 DSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR--LITYLDQTT 488
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG--TVLVQQA 303
+K + LL E L + L + + + ++ ++ +++ G VL+QQ
Sbjct: 489 QKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQW 546
Query: 304 EDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK 361
+ G + +++ +++++++ DK + CF+ + F A+KEAFE F NK
Sbjct: 547 IEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINK 606
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K L
Sbjct: 607 RP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL 663
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N QN
Sbjct: 664 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QN 722
Query: 482 AHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL W +LG C
Sbjct: 723 VPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHC 782
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ EL VS +Q LL+FN + S EI + +L R L SL+C K
Sbjct: 783 VLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKA 842
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L K P K I D F N F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 843 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 902
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+ERDKENPN
Sbjct: 903 DAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQ 960
Query: 718 FRYLA 722
+ Y+A
Sbjct: 961 YNYIA 965
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 818 (293.0 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 206/621 (33%), Positives = 342/621 (55%)
Query: 126 PALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFV-EIGMGQMDS---------YEKD 175
P +V C ++ K++ + + L+ +L +FV E+G+ + D+ Y++
Sbjct: 174 PLNKQVQNKCLLKKKKKKKAMRMLSQ-LITFILLVFVVELGLNEDDAFAKGPTLTVYKES 232
Query: 176 FEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKV 235
FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K
Sbjct: 233 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKC 292
Query: 236 QHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAE 295
+ ++L+ E+ E LL DK EDL RMY L +I GL + + + HI +
Sbjct: 293 E-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQ 348
Query: 296 GTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAF 355
G +++ +AA N ++ ++ ++++H KY V + F N F AL +A
Sbjct: 349 GLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKAC 400
Query: 356 EIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYIS 408
F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI
Sbjct: 401 GRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIE 458
Query: 409 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 468
DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 459 DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDL 518
Query: 469 QTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTK 528
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++
Sbjct: 519 NEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHS 576
Query: 529 HRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDD 588
RKLTW+Y L + + + L ST+Q A LL +NT D + ++ + D
Sbjct: 577 GRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDI 636
Query: 589 LVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKI 645
L ++L L +K +L E N + + D + + ++ R+ I +P E+K+
Sbjct: 637 LAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQE 696
Query: 646 VE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMED 701
E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++
Sbjct: 697 QETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDI 756
Query: 702 LITRDYLERDKENPNMFRYLA 722
LI ++YLER + + YLA
Sbjct: 757 LIEKEYLERVDGEKDTYSYLA 777
Score = 77 (32.2 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
Score = 70 (29.7 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 14/62 (22%), Positives = 36/62 (58%)
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY + K+ + Y++++ L + DE +L+ ++W +++ + L+ YL+R+++
Sbjct: 87 ELYKRLKEFLKNYLTNL-LKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWV 145
Query: 121 AR 122
R
Sbjct: 146 RR 147
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 239/728 (32%), Positives = 386/728 (53%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y Q KL + + S LY + N+C+ K S LY + +Q E+
Sbjct: 37 NYTQDTWHKLHEAVAAIQSSTSIKYNLEELYQAVENLCSYK----VSATLYKQLRQVCED 92
Query: 73 YISSMVLP--SLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPAL 128
++ + +L ++ D + L+++ K W +H + + F +LDR ++ + S LP++
Sbjct: 93 HVKAQILQFRCCTDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSI 152
Query: 129 NEVGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGA 186
++GL FR + DK+ + + ID LL + G S + ML D
Sbjct: 153 WDMGLELFRNHVISDKQVQNKTIDGILLLIERE---RSGEAVDRSLLRSLLS-MLSDLQV 208
Query: 187 YYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATE 246
Y ++ E +C Y + + L +ER+ V YLH S+ +L E + + ++ Y
Sbjct: 209 YKESFEQRFLEETNCL-YAAEGQR-LMQERE-VPEYLHHVSK-RLEE--EGDRVITYLDH 262
Query: 247 LLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG--TVLVQ 301
+K C + LL E L + L + + + + + ++ +G +L+Q
Sbjct: 263 STQKPLIACVEKQLLGEHLTAILQK--GLDNLLDENRISDLTQTYQLFSRVKGGQQILLQ 320
Query: 302 QAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFC 359
+ N G + +++ +++++++ DK + CF + F +KE+FE F
Sbjct: 321 HWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFI 380
Query: 360 NKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRK 419
NK + +EL+A + D+ L+ GN++ +DE +E L+K++ + +I KD+F FY+K
Sbjct: 381 NKRP--NKPAELIAKYVDSKLR-AGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKK 437
Query: 420 KLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNN 479
LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N
Sbjct: 438 DLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQFKQYMQNQ 497
Query: 480 QNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL 538
+ PG IDL+V +LT G+WP+Y +++L SEM+K EVFK FY K RKL W +L
Sbjct: 498 SD--PGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTL 555
Query: 539 GQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 598
G + +F++ E VS +Q LL+FN D S+ EI + +L R L SL+C
Sbjct: 556 GHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELRRTLQSLAC 615
Query: 599 AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRR 654
K ++L+K P K + D F FN F ++ RIKI V+E+ E V +DR+
Sbjct: 616 GKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQ 675
Query: 655 YAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKEN 714
Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK+N
Sbjct: 676 YQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDN 733
Query: 715 PNMFRYLA 722
PN + Y+A
Sbjct: 734 PNQYHYVA 741
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 237/718 (33%), Positives = 388/718 (54%)
Query: 34 FSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMV-LPSLSE-KHDEYML 91
+S EE LY + NMC+ H QLY K K+ E+++ + L L+ D+ +L
Sbjct: 140 YSLEE---LYQAVVNMCS----HKMDAQLYAKLKELTEQHVKRNIKLKELTGGSMDKLIL 192
Query: 92 RELVKRW----ANHKVMVRWLSRFFHYLDRYFIARRS-LPALNEVGLTCFREQIDKEREG 146
E + W +M+R + F Y+DR ++ + S + ++ ++GL FR +
Sbjct: 193 LEKINHWWLSFCQQMIMIRSI---FLYMDRTYVLQNSTVHSIWDMGLDLFRIHF---AQN 246
Query: 147 EQIDRALLKNVLDIFVEIGMGQ-MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYM 205
+ + + +L + + G +D ML D Y S ++ D+ + +
Sbjct: 247 SVVQKRTVDGLLTLIEKERQGSTVDRGLLKSLVRMLCDLQIYTSSFEEKFL--DATNQ-L 303
Query: 206 IKAEECLKKERDRVSHYLHSSSEPKLVEK-----------VQHELLVVYATELLEKE--- 251
KAE K + V YL ++ +L E+ +H L+ ELL +
Sbjct: 304 YKAESQRKMQELEVPEYLQHVNK-RLAEENERLRHYLDSSTKHPLIYNVEKELLAEHLTS 362
Query: 252 --QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATN 309
Q G +LL ++++ DL+ +Y L ++ G + F I +G +V E
Sbjct: 363 ILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGNFNGFIKKKGRTIVIDPE----- 417
Query: 310 QGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSS 369
+++ +++ +++ DK V CF ++ F +L+EAFE F N+ + +
Sbjct: 418 --------KDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSLREAFEFFINQRA--NKPA 467
Query: 370 ELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR 429
EL+A + D L+ G N+ +DE +E+TL+K++ L +I KD+F FY+K LA+RLL +
Sbjct: 468 ELIAKYVDMKLRSG-NKGTTDEELEKTLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGK 526
Query: 430 SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEY-LSNNQNAHPGIDL 488
SA+ D E+S+L+KLKQ+CGG FTSK+EGM D+ L+R+ +F + LSNN++ H +DL
Sbjct: 527 SASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELSRDINIAFRGHALSNNRDVH-NLDL 585
Query: 489 SVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 548
V++LT G+WP+Y +++ +P + + ++F FY K RKL W +LG C + +F+
Sbjct: 586 CVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYLEKHSGRKLQWQPTLGNCMLRAQFD 645
Query: 549 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP 608
EL+VS +QA LLLFN LSY EI+ + +L R L SL+C + +++ K P
Sbjct: 646 AGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLIEDGELRRTLQSLACGRARVITKTP 705
Query: 609 NTKTISQSDHFEFNSKFTDRMRRIKI---PLPPVDERKKIVED-VDKDRRYAIDAALVRI 664
+ I D F+FN++FT+++ RIKI + +E +K E+ V +DR+Y IDAA+VRI
Sbjct: 706 KGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRI 765
Query: 665 MKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
MK RK L H L++E QL+ KP +KKR+E LI RDY+ERDK+N N + Y+A
Sbjct: 766 MKMRKTLSHNLLITELFNQLTFPVKP--ADLKKRIESLIDRDYMERDKDNQNQYNYVA 821
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 880 (314.8 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 227/687 (33%), Positives = 365/687 (53%)
Query: 66 YKQAFEEY-ISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS 124
Y Q +E+Y SS VL + + ++++L H V + + D F
Sbjct: 111 YTQQWEDYQFSSKVLNGICARLNKHLLNSTNNE--GHNVCEIYSLAMVTWRDCLF----- 163
Query: 125 LPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKD--------- 175
P LN+ + I+KER GE I+ L+ + ++E+G+ + + +E+
Sbjct: 164 RP-LNKQVTNAVLKLIEKERNGESINTRLISGAIQSYLELGVNEDNQFEESPMLTVYKEA 222
Query: 176 FEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKV 235
FE L DT YY+RK++ + ++ EYM K E L +ER R YLH SS+ KL K
Sbjct: 223 FESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEERRRARVYLHQSSKGKLARKC 282
Query: 236 QHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAE 295
+ L+ + L + Q+ LL +K EDL RMYRL ++I GL + + HI +
Sbjct: 283 RQVLVEKHLEIFLTEFQN----LLNANKSEDLGRMYRLIYRIKNGLGEFKKILETHIHNQ 338
Query: 296 GTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAF 355
G +++ +AA N ++ + ++ +H KY V + F NH F AL +A
Sbjct: 339 GLSAIEECGEAALND--------PRMYVETVLNIHKKYNALVISAFRNHADFVAALDKAC 390
Query: 356 EIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYIS 408
F N A S S ELLA +CD++LKK + K +EA +E+TL V+ + Y+
Sbjct: 391 SGFINNNAVTKMAQSSSKSPELLAQYCDSLLKK--SSKNPEEAELEDTLNHVMTVFKYMD 448
Query: 409 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 468
DKD+ +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +++
Sbjct: 449 DKDVVQKFYTKMLAKRLVHQNSASDDAEASMVSKLKQACGFEYTSKLQRMFQDIGVSKAL 508
Query: 469 QTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTK 528
F+++L +++ +D S+ VL+ G+WP +S + LPSE+ C F FY +
Sbjct: 509 NAQFKKHLMDSEPLD--LDFSIHVLSYGWWPFEESCTVLLPSELEPCYRRFTAFYASCYS 566
Query: 529 HRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDD 588
RKL+W Y L + + + + N L VST+Q A LL +NT D + ++M + D
Sbjct: 567 DRKLSWAYQLSEGELVTNYFKNNYTLRVSTFQMAILLQYNTEDAYTIQQLMDSTQIKMDI 626
Query: 589 LVRLLHSLSCAKYKILLKEPNTKTISQSD---------HFEFNSKFTDRMRRIKIPLPPV 639
+ ++L L K+K+L+ E + + + + HF + SK R+ I LP
Sbjct: 627 VAQVLQIL--LKFKLLVLEDKSANVDEVELKPDTLIKLHFGYKSK----KLRVNISLPMK 680
Query: 640 DERKK----IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 695
E+K+ + +++++DR+ I AA+VRIMK RKV+ HQQL+ E QLS +FKP I I
Sbjct: 681 IEQKREQETMYKNIEEDRKLLIQAAIVRIMKMRKVVKHQQLLGEVATQLSSVFKPQISVI 740
Query: 696 KKRMEDLITRDYLERDKENPNMFRYLA 722
KK ++ LI ++YLER + + + YLA
Sbjct: 741 KKCIDILIEKEYLERVGDEKDTYSYLA 767
Score = 58 (25.5 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 6 IDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
+ +D+ WD ++ GI ++ +S S Y+ LYT +YN C P +Q
Sbjct: 15 LGIDELWDNIRAGIQQVYA-----RQSMVKSR-YIELYTLLYNHCLYVSPQAQTQ 63
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 237/725 (32%), Positives = 382/725 (52%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y Q KL ++ + S LY + N+C+ H S LY + +Q E+
Sbjct: 57 NYTQDTWRKLHEAVKAIQSSTSIRYNLEELYQAVENLCS----HKVSPTLYKQLRQVCED 112
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
++ + +LP + D + L+++ W +H + + F +LDR ++ + S LP++ +
Sbjct: 113 HVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 172
Query: 131 VGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQ-MDSYEKDFEEHMLQDTGAYYS 189
+GL FR I +R + + +L + G+ +D ML D Y
Sbjct: 173 MGLELFRNHIISDR---MVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQVYKD 229
Query: 190 RKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLE 249
++ E +C Y + + L ++R+ V YL+ S+ +L E+ ++ Y +
Sbjct: 230 SFELKFLEETNCL-YAAEGQR-LMQDRE-VPEYLNHVSK-RLEEEADR--VITYLDHSTQ 283
Query: 250 KEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEGT--VLVQQAE 304
K C + LL E L + L H + + P + +++ +G L+Q
Sbjct: 284 KPLIACVEKQLLGEHLTAILQK--GLEHLLDENRVPDLTQMYQLFSRVKGGQHALLQHWS 341
Query: 305 DAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKA 362
+ G + +++ +++ +++ DK V CF + F +KE+FE F NK
Sbjct: 342 EYIKTFGTTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKR 401
Query: 363 VGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLA 422
+ +EL+A D+ L+ GN++ +DE +E L+K++ L +I KD+F FY+K LA
Sbjct: 402 P--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLA 458
Query: 423 RRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 482
+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++++ N Q+A
Sbjct: 459 KRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQN-QSA 517
Query: 483 HPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
PG IDL+V +LT G+WP+Y +++LP EMV+ EVFK FY K RKL W +LG
Sbjct: 518 -PGPIDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHA 576
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ F++ E VS +Q LL+FN D S+ EI + +L R L SL+C K
Sbjct: 577 VLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKA 636
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L+K P K + D F FN+ F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 637 RVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQI 696
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK++PN
Sbjct: 697 DAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQ 754
Query: 718 FRYLA 722
+ Y+A
Sbjct: 755 YHYVA 759
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 239/726 (32%), Positives = 381/726 (52%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y Q KL + + S LY + N+C+ H S LY + +Q E+
Sbjct: 59 NYTQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCS----HKVSPTLYKQLRQVCED 114
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
++ + +L + D + L+++ W +H + + F +LDR ++ + S LP++ +
Sbjct: 115 HVQAQILQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 174
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I DK + + ID LL I E +D ML D Y
Sbjct: 175 MGLELFRNHIISDKMVQSKSIDGILLL----IERERNGEAVDRSLLRSLLSMLSDLQVYK 230
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
++ E +C Y + + L +ER+ V YL+ S+ +L E + + ++ Y
Sbjct: 231 DSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVSK-RLEE--EGDRVITYLDHST 284
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG--TVLVQQA 303
+K C + LL E L + L H + + P + +++ +G +L+Q
Sbjct: 285 QKPLIACVEKQLLGEHLTAILHK--GLDHLLDENRVPDLTQMYQLFSRVKGGQQILLQHW 342
Query: 304 EDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK 361
+ G + +++ +++ +++ D+ + CF + F +KE+FE F NK
Sbjct: 343 SEYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFETFINK 402
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A D+ L+ GN++ +DE +E L+KV+ + +I KD+F FY+K L
Sbjct: 403 RP--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKDL 459
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N +
Sbjct: 460 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQYMQNQSD 519
Query: 482 AHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQ 540
PG IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RKL W +LG
Sbjct: 520 --PGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGH 577
Query: 541 CNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 600
+ +F++ E VS +Q LL+FN D S+ EI + +L R L SL+C K
Sbjct: 578 AVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGK 637
Query: 601 YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYA 656
++L+K P K + D F FN +F ++ RIKI V+E+ E V +DR+Y
Sbjct: 638 ARVLVKSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQ 697
Query: 657 IDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPN 716
IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK+NPN
Sbjct: 698 IDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPN 755
Query: 717 MFRYLA 722
+ Y+A
Sbjct: 756 QYHYVA 761
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 854 (305.7 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 210/618 (33%), Positives = 343/618 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 520
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 521 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 578
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D L +
Sbjct: 579 LTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQ 638
Query: 592 LLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE- 647
+L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 639 VLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQET 698
Query: 648 ---DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 699 THKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIE 758
Query: 705 RDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 759 KEYLERVDGEKDTYSYLA 776
Score = 77 (32.2 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 854 (305.7 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 210/618 (33%), Positives = 343/618 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 520
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 521 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 578
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D L +
Sbjct: 579 LTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILAQ 638
Query: 592 LLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE- 647
+L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 639 VLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQET 698
Query: 648 ---DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 699 THKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIE 758
Query: 705 RDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 759 KEYLERVDGEKDTYSYLA 776
Score = 77 (32.2 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 854 (305.7 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 210/618 (33%), Positives = 343/618 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 520
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 521 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 578
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D L +
Sbjct: 579 LTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQ 638
Query: 592 LLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE- 647
+L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 639 VLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQET 698
Query: 648 ---DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 699 THKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIE 758
Query: 705 RDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 759 KEYLERVDGEKDTYSYLA 776
Score = 77 (32.2 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 854 (305.7 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 210/618 (33%), Positives = 343/618 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 520
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 521 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 578
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D L +
Sbjct: 579 LTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQ 638
Query: 592 LLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE- 647
+L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 639 VLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQET 698
Query: 648 ---DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 699 THKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIE 758
Query: 705 RDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 759 KEYLERVDGEKDTYSYLA 776
Score = 77 (32.2 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 854 (305.7 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 210/618 (33%), Positives = 343/618 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 520
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 521 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 578
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D L +
Sbjct: 579 LTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQ 638
Query: 592 LLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE- 647
+L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 639 VLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQET 698
Query: 648 ---DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 699 THKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIE 758
Query: 705 RDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 759 KEYLERVDGEKDTYSYLA 776
Score = 77 (32.2 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 854 (305.7 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 210/618 (33%), Positives = 343/618 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 520
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 521 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 578
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D L +
Sbjct: 579 LTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQ 638
Query: 592 LLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE- 647
+L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 639 VLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQET 698
Query: 648 ---DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLIT 704
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 699 THKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIE 758
Query: 705 RDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 759 KEYLERVDGEKDTYSYLA 776
Score = 77 (32.2 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 848 (303.6 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 211/620 (34%), Positives = 345/620 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKD---------FEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D++ K FE
Sbjct: 176 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFET 235
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 236 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 294
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 295 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLA 351
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ ++A N ++ ++ I+++H KY V + F N F AL +A F
Sbjct: 352 AIEKCGESALND--------PKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRF 403
Query: 359 CN-----KAVGGSSSS-ELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N K V SS S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 404 INNNAVTKMVQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 461
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 471
+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 462 VFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQ 521
Query: 472 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 531
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ RK
Sbjct: 522 FKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRK 579
Query: 532 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
LTW+Y L + + + L ST+Q A LL +NT D + ++ + D LV+
Sbjct: 580 LTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDVYTVQQLTDSTQIKIDILVQ 639
Query: 592 LLHSLSCAKYKILLKEPNTKTISQSDH-----FEFNSKFTDRMRRIKIPLPPVDERKKIV 646
+L L K K+L+ E + + + + + ++ R+ I +P E+K+
Sbjct: 640 VLQIL--LKSKLLVLEDENANVDEVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQ 697
Query: 647 E----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 702
E ++++DR+ I AA+VR MK RKVL HQQL++E + QLS FKP + IKK ++ L
Sbjct: 698 ETTHKNIEEDRKLLIQAAIVRTMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDIL 757
Query: 703 ITRDYLERDKENPNMFRYLA 722
I ++YLER + + YLA
Sbjct: 758 IEKEYLERVDGEKDTYSYLA 777
Score = 77 (32.2 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 232/725 (32%), Positives = 378/725 (52%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y Q KL ++ + S LY + N+C+ H + LY + ++A E
Sbjct: 59 NYTQDTWHKLHEAVKAIQSSTSIRYNLEELYQAVENLCS----HKVAPTLYQQLREACES 114
Query: 73 YISSMVLPSLSEKHDE-YMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSL-PALNE 130
++ + +L ++ D + L+++ W +H + + F +LDR ++ + SL P++ +
Sbjct: 115 HVQAQILQVCTDSLDSVFFLKKINTCWQDHCRQMIMVRSIFLFLDRTYVLQNSLLPSIWD 174
Query: 131 VGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQ-MDSYEKDFEEHMLQDTGAYYS 189
+GL FR + +R + + +L + G+ +D ML D Y
Sbjct: 175 MGLELFRSHVISDR---MVQTKTIDGILLLIARERSGEAVDRSLLRGLLGMLSDLQVYKD 231
Query: 190 RKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLE 249
++ E +C Y + + L +ER+ V YL+ S+ +L E + + ++ Y +
Sbjct: 232 SFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVSK-RLEE--EGDRVITYLDHSTQ 285
Query: 250 KEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG--TVLVQQAE 304
K C + LL E L + L H + + P + +++ G L+Q
Sbjct: 286 KPLIACVEKQLLGEHLTAILQK--GLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWS 343
Query: 305 DAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKA 362
+ G + +++ +++ +++ D+ + CF + F +KE+FE F NK
Sbjct: 344 EYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRNEKFINLMKESFEAFINKR 403
Query: 363 VGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLA 422
+ +EL+A D+ L+ GN++ +DE +E L+KV+ + +I KD+F FY+K LA
Sbjct: 404 P--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKVMIIFRFIHGKDVFEAFYKKDLA 460
Query: 423 RRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNA 482
+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N +
Sbjct: 461 KRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSD- 519
Query: 483 HPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
PG IDL+V +LT G+WP+Y D++L EMVK EVFK FY K RKL W +LG
Sbjct: 520 -PGSIDLTVNILTMGYWPTYTPMDVHLTPEMVKLQEVFKTFYLGKHSGRKLQWQTALGHA 578
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ E VS +Q LL+FN D + EI + +L R L SL+C K
Sbjct: 579 VLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELRRTLQSLACGKA 638
Query: 602 KILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAI 657
++L+K P K + D F FN F ++ RIKI V+E+ E V +DR+Y I
Sbjct: 639 RVLIKSPKGKEVEDGDKFFFNGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQI 698
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK++PN
Sbjct: 699 DAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQ 756
Query: 718 FRYLA 722
+ Y+A
Sbjct: 757 YHYVA 761
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 241/729 (33%), Positives = 375/729 (51%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y Q KL + + S LY + N+C+ H S LY + +QA E
Sbjct: 15 NYTQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCS----HKVSPTLYQQLRQACEG 70
Query: 73 YISSMVL----PSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPA 127
++ + +L P L+++ W +H + + F +LDR ++ + S LP+
Sbjct: 71 HVQAQILQFRQPCTDSLDSVLFLKKMNTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLPS 130
Query: 128 LNEVGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTG 185
+ ++GL FR I DK + + ID LL I E +D ML D
Sbjct: 131 IWDMGLELFRNHIISDKMVQTKTIDGILLL----IERERSGEAVDRSLLRSLLGMLSDLQ 186
Query: 186 AYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYAT 245
Y ++ E +C Y + + L +ER+ V YL S+ +L E+ ++ Y
Sbjct: 187 VYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLDHVSK-RLEEEADR--VITYLD 240
Query: 246 ELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG--TVLV 300
+K C + LL E L + L H + + P + +++ G L+
Sbjct: 241 HSTQKPLIACVEKQLLGEHLTAILQK--GLDHLLDENRVPDLTQMYQLFSRVRGGQQALL 298
Query: 301 QQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
Q D G + +++ +++ +++ D+ + CF F +KE+FE F
Sbjct: 299 QHWSDYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRSEKFVNLMKESFETF 358
Query: 359 CNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYR 418
NK + +EL+A D+ L+ GN++ +DE +E L+KV+ L +I KD+F FY+
Sbjct: 359 INKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERMLDKVMILFRFIHGKDVFEAFYK 415
Query: 419 KKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSN 478
K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N
Sbjct: 416 KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQN 475
Query: 479 NQNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYS 537
+ PG IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RKL W +
Sbjct: 476 QSD--PGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTT 533
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
LG + +F++ E VS +Q LL+FN D S+ +I + +L R L SL+
Sbjct: 534 LGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIEDSELRRTLQSLA 593
Query: 598 CAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDR 653
C K ++LLK P K + D F FN++F ++ RIKI V+E+ E V +DR
Sbjct: 594 CGKARVLLKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDR 653
Query: 654 RYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKE 713
+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+ERDK+
Sbjct: 654 QYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKD 711
Query: 714 NPNMFRYLA 722
+PN + Y+A
Sbjct: 712 SPNQYHYVA 720
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 840 (300.8 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 209/619 (33%), Positives = 342/619 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + I+KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 175 LNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFES 234
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 235 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 293
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 294 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA 350
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
+++ +AA N ++ ++ ++++H KY V + F N F AL +A F
Sbjct: 351 AIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRF 402
Query: 359 CNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKD 411
N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DKD
Sbjct: 403 INNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDKD 460
Query: 412 LFAEFYRKKLARRLLFDRSANDDHERSILT-KLKQQCGGQFTSKMEGMVTDLTLARENQT 470
+F +FY K LA+ L+ SA+DD E S+++ KLKQ CG ++TSK++ M D+ ++++
Sbjct: 461 VFQKFYAKMLAK-LVHQNSASDDAEASMISNKLKQACGFEYTSKLQRMFQDIGVSKDLNE 519
Query: 471 SFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHR 530
F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY ++ R
Sbjct: 520 QFKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGR 579
Query: 531 KLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLV 590
KLTW+Y L + + + L ST+Q A LL +NT D + ++ + D L
Sbjct: 580 KLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQIKMDILA 639
Query: 591 RLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDERKKIVE 647
++L L +K +L E N + + D + + ++ R+ I +P E+K+ E
Sbjct: 640 QVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQE 699
Query: 648 ----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLI 703
++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK ++ LI
Sbjct: 700 TTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILI 759
Query: 704 TRDYLERDKENPNMFRYLA 722
++YLER + + YLA
Sbjct: 760 EKEYLERVDGEKDTYSYLA 778
Score = 77 (32.2 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
K I LDQ WD ++ GI ++ + YM LYT +YN CT
Sbjct: 13 KQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCT 54
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 236/736 (32%), Positives = 377/736 (51%)
Query: 14 YMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEY 73
Y K L+R + + S + LY YNM H + ++LY + +
Sbjct: 24 YADKTWQILERAIHQIYNQDASGLSFEELYRNAYNMVL----HKFGEKLYTGFIATMTSH 79
Query: 74 ISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGL 133
+ + L EL K+W H + + Y+DR +I ++ +GL
Sbjct: 80 LKEKS-KLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTHVHPMGL 138
Query: 134 TCFREQI------------------DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKD 175
+R+ + KER GE IDR L++NV+ +F+++G Y++D
Sbjct: 139 NLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRNVIKMFMDLGESV---YQED 195
Query: 176 FEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKV 235
FE+ L + +Y ++ +I C +Y+ K+E+ L +E +RV+HYL + SE K+ V
Sbjct: 196 FEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKITSVV 255
Query: 236 QHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAE 295
+ E++ + L+ E SG +L DK EDL RMY L+ ++ GL V +V H+
Sbjct: 256 EKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSHLREM 315
Query: 296 GTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAF 355
G LV E S V+ ++++++ DKY + + F N F AL +F
Sbjct: 316 GKQLVTDPEK-------SKDPVE---FVQRLLDERDKYDKIINTAFGNDKTFQNALNSSF 365
Query: 356 EIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAE 415
E F N + S E ++ F D+ L+KG + ++D +E L+KV+ L Y+ +KD+F +
Sbjct: 366 EYFINL---NARSPEFISLFVDDKLRKG-LKGITDVDVEVILDKVMMLFRYLQEKDVFEK 421
Query: 416 FYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEY 475
+Y++ LA+RLL ++ +DD ERS++ KLK +CG QFTSK+EGM TD+ + + F Y
Sbjct: 422 YYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGF--Y 479
Query: 476 LSNNQNAH-PGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL-- 532
S+ + + P + + V + +L ++ C + + T T R
Sbjct: 480 GSHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEVSVL-CEKFRSYYLGTHTGRRLSWQ 538
Query: 533 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 592
T + + I GK QK+ EL VST+Q L+LFN SDRLSY EI + DL R
Sbjct: 539 TNMGTADIKAIFGK-GQKH-ELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRC 596
Query: 593 LHSLSCAKYK-ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIV 646
L SL+C K K ++ KEP +K I + D F N KFT + ++KI E+++
Sbjct: 597 LQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQKETEPEKQETR 656
Query: 647 EDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRD 706
+ V++DR+ I+AA+VRIMKSRK+L H +++E +QL F + IKKR+E LI RD
Sbjct: 657 QRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERD 716
Query: 707 YLERDKENPNMFRYLA 722
+LERD + ++RYLA
Sbjct: 717 FLERDSTDRKLYRYLA 732
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 776 (278.2 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 193/596 (32%), Positives = 329/596 (55%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS-------YEKDFEEHMLQDTGAYYSRKA 192
++K+R GE I+++ +K+++D FV +G+ + D Y F+ L+ T YY ++
Sbjct: 175 VEKQRNGETIEQSRIKSIVDSFVSLGLDETDPTKSTLEIYRYYFQRPFLEATRIYYEDES 234
Query: 193 SNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQ 252
++ ++S EYM KAE L++E+ RV YL++ L ++LV +ELL E
Sbjct: 235 RQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDISKDLTSTCL-DVLVTAHSELLRDE- 292
Query: 253 SGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGG 312
+ LL ++ +DL+RMYRL +I GL+P+ F+ H+ G V++ AA +G
Sbjct: 293 --FQPLLDNERQDDLARMYRLLSRIKDGLDPLRTKFEAHVRRAGLSAVEKV--AA--EGD 346
Query: 313 SSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK----AVGGSSS 368
S + ++ + ++ +H +Y V F + F ++L A F N+ G + +
Sbjct: 347 S---FEPKMYVDALLSVHTRYHSLVKEAFNGESEFVRSLDNACREFVNRNKICKSGSTKT 403
Query: 369 SELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLF 427
ELLA + D++LK+G K ++E+ +EE L +++ + YI DKD+F +FY K LA+RL+
Sbjct: 404 PELLAKYTDSLLKRGS--KAAEESELEEMLVQIMTVFKYIEDKDVFQKFYSKMLAKRLVH 461
Query: 428 DRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLS----NNQNAH 483
S +DD E S+++KLK+ CG ++T+K++ M D+ ++++ +S++++L ++ +
Sbjct: 462 VSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQISKDLNSSYKDWLEKSFLDDDDRK 521
Query: 484 PGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCN 542
+D +L TGFWP + S+ P E+VK E F+ FY K RKLTW++ L +
Sbjct: 522 KLVDSHFQILGTGFWPLTAPSTSFLAPPEIVKTSERFQKFYCDKHNGRKLTWLWQLCKGE 581
Query: 543 INGKFEQKNIEL----IVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 598
+ + KN ++ +VSTYQ LLLFN SD L+YS+I LT + L L
Sbjct: 582 LKANYI-KNTKVPYTFLVSTYQMGILLLFNESDTLTYSDIQKATTLTPEILDPNLSIF-- 638
Query: 599 AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRR 654
K K+L P F N F ++ ++ + + E+K +D +++DR+
Sbjct: 639 LKAKVLNISPEGSKPGPDSTFSLNYNFKNKKIKVNLNIQIRSEQKVETDDTHKTIEEDRK 698
Query: 655 YAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLER 710
+ +A+VRIMKSRK + H QLV E + Q+ F P + IKK +E L+ +DY+ER
Sbjct: 699 LLLQSAIVRIMKSRKKMKHVQLVQEVIHQVKSRFPPQVPDIKKNIEALMEKDYIER 754
Score = 120 (47.3 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 30/128 (23%), Positives = 59/128 (46%)
Query: 7 DLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT------------QKP 54
DL++ W +++ GI + LE + YM LYT ++N CT Q+
Sbjct: 13 DLEETWVFLENGINNVMVKLE----DGVDMKNYMALYTAVHNFCTSHKAVSGQAIQAQRG 68
Query: 55 PHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHY 114
H ++LY K + ++ + S+ DE +L ++ W + ++++ F Y
Sbjct: 69 AHLLGEELYRKLGEYLSRHLEWVHGESMGHT-DEALLSFYIREWQRYTTAAKYINHLFRY 127
Query: 115 LDRYFIAR 122
L+R+++ R
Sbjct: 128 LNRHWVKR 135
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 233/719 (32%), Positives = 378/719 (52%)
Query: 32 SPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYML 91
S S EE LY YNM H Y +LY ++ + S+ E L
Sbjct: 45 SGLSFEE---LYRNAYNMVL----HKYGDKLYTGLVTTMTFHLKE-ICKSIEEAQGGAFL 96
Query: 92 RELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFREQI----------- 140
L ++W +H ++ + Y+DR +++ ++E+GL +R+ +
Sbjct: 97 ELLNRKWNDHNKALQMIRDILMYMDRTYVSTTKKTHVHELGLHLWRDNVVYSSKIQTRLL 156
Query: 141 -------DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKAS 193
KER GE IDR L++NV+ +F+++G Y+ DFE+ L+ + +Y ++
Sbjct: 157 NTLLDLVHKERTGEVIDRVLMRNVIKMFMDLGESV---YQDDFEKPFLEASAEFYKVESM 213
Query: 194 NWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQS 253
+I C EY+ KAE+ L +E +RV +YL + SE K+ V+ E++ + L+ E S
Sbjct: 214 EFIESCDCGEYLKKAEKPLVEEVERVVNYLDAKSEAKITSVVEREMIANHVQRLVHMENS 273
Query: 254 GCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGS 313
G +L DK ED+ RMY L+ ++ GL V +V H+ G LV E S
Sbjct: 274 GLVNMLLNDKYEDMGRMYSLFRRVANGLVTVRDVMTLHLREMGKQLVTDPEK-------S 326
Query: 314 SGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLA 373
V+ ++++++ DKY + F N F AL +FE F N + S E ++
Sbjct: 327 KDPVE---FVQRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFVNL---NTRSPEFIS 380
Query: 374 TFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAND 433
F D+ L+KG + + +E ++ L+KV+ L Y+ +KD+F ++Y++ LA+RLL ++ +D
Sbjct: 381 LFVDDKLRKG-LKGVGEEDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSD 439
Query: 434 DHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAH-PGIDLSV-T 491
D ER+++ KLK +CG QFTSK+EGM TD+ + + F Y S+ + + P + + V T
Sbjct: 440 DAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGF--YNSHPELSEGPTLVVQVLT 497
Query: 492 VLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL--TWIYSLGQCNINGKFEQ 549
+ P+ + + L ++ C + + T T R T + + + GK Q
Sbjct: 498 TGSWPTQPTIQCN-LPAEVSVL-CEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGK-GQ 554
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK-ILLKEP 608
K+ EL VST+Q L+LFN SDRLSY EI + DL R L S++C K K +L KEP
Sbjct: 555 KH-ELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEP 613
Query: 609 NTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVR 663
+K I++ D F N +F + ++KI E+++ + V++DR+ I+AA+VR
Sbjct: 614 MSKEIAEEDWFVVNDRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVR 673
Query: 664 IMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
IMKSR+VL H +++E +QL F + IKKR+E LI RD+LERD + ++RYLA
Sbjct: 674 IMKSRRVLDHNNIIAEVTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 732
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 517 (187.1 bits), Expect = 1.6e-86, Sum P(2) = 1.6e-86
Identities = 113/253 (44%), Positives = 148/253 (58%)
Query: 474 EYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLT 533
EY+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 505 EYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 563
Query: 534 WIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLL 593
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R L
Sbjct: 564 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTL 623
Query: 594 HSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDV 649
SL+C K ++L K P K I D F N F ++ RIKI V+E+ E V
Sbjct: 624 QSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERV 683
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
+DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+E
Sbjct: 684 FQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYME 741
Query: 710 RDKENPNMFRYLA 722
RDKENPN + Y+A
Sbjct: 742 RDKENPNQYNYIA 754
Score = 396 (144.5 bits), Expect = 1.6e-86, Sum P(2) = 1.6e-86
Identities = 123/453 (27%), Positives = 232/453 (51%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 80 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 135
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 136 HIKAQIHQFKTGFKDTVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 195
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D +ML D Y
Sbjct: 196 MGLELFRAHIISDQKVQTKTIDGILLL----IERERNGEAIDRSLLRSLLNMLSDLQIYQ 251
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV----EKVQHE 238
+ L+++ Y + ++ L +ER+ V YLH ++ +L+ + Q
Sbjct: 252 DSFEQRF-LQETNRLYAAEGQK-LMQERE-VPEYLHHVNKRLEEEADRLITYLDQTTQKS 308
Query: 239 LLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHIT 293
L+ +LL + Q G +LL E++++DLS +Y+L+ ++ G++ + + ++I
Sbjct: 309 LIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIK 368
Query: 294 AEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKE 353
A G+ +V E +++ +++++++ DK + CF+ + F A+KE
Sbjct: 369 AFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKE 415
Query: 354 AFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLF 413
AFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F
Sbjct: 416 AFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVF 472
Query: 414 AEFYRKKLARRLLFDRSANDDHERSILTKLKQQ 446
FY+K LA+RLL +SA+ D E+S+L+KLK +
Sbjct: 473 EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE 505
Score = 43 (20.2 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 53 KPPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKV 103
K P +Y+ + + K K+A E + S S K++ L + V+ ++K+
Sbjct: 76 KLPENYTDETWQKLKEAVEA-----IQNSTSIKYNLEELYQAVENLCSYKI 121
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 601 (216.6 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 155/568 (27%), Positives = 280/568 (49%)
Query: 5 TID---LDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
TID + Q W+ +++ I +++R S S EE LY Y M H + ++
Sbjct: 21 TIDEQYVTQTWELLKRAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGER 69
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY+ K +++++S+ + + + L + + WA+H V + + Y+DR ++A
Sbjct: 70 LYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVA 129
Query: 122 RRS--LPALNEVGLTCFREQIDKERE-GEQIDRALL-----------------KNVLDIF 161
+ + LP N +GL +R +I ++ G++I ALL KN D+
Sbjct: 130 QNNHVLPVYN-LGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNACDML 188
Query: 162 VEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWIL--EDSCPEYMIKAEECLKKERDRV 219
+ +G+ YE +FE +L++T YY NW+ D+C Y+ + E + E R
Sbjct: 189 ISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRA 247
Query: 220 SHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPK 279
S YL +E K+++ + ++ + ++ + G + +L K+EDL+R++R++ +I
Sbjct: 248 SRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGD 307
Query: 280 GLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTN 339
+ K + A L + + N+ V + ++++L D + +T
Sbjct: 308 SVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPVN---FVNELLQLKDYFSSLLTT 364
Query: 340 CFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEK 399
F + F + FE F N S E +A + D++L+ G + +SD ++ L+
Sbjct: 365 AFADDRDFKNRFQHDFETFLNS---NRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDN 420
Query: 400 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMV 459
V+ L Y+ +KD+F +++++ LA+RLL D+S +DD E+++L KLK +CG QFT K+E M
Sbjct: 421 VMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMF 480
Query: 460 TDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVF 519
D L TSF ++ Q ID+S+ VLT G WP+ + + + LP E+ E+F
Sbjct: 481 RDKELWLTLATSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMF 539
Query: 520 KGFYETKTKHRKLTWIYSLGQCNINGKF 547
+Y K RKLT LG ++ F
Sbjct: 540 TQYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 279 (103.3 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 71/197 (36%), Positives = 111/197 (56%)
Query: 537 SLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 596
S G+ K E K ++ V+T+Q LL FN +R+S ++M +L + +L R L SL
Sbjct: 586 SSGESMKERKPEHKILQ--VNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSL 643
Query: 597 SCAK--YKILLKEPNTK-TISQSDHFEFNSKFTDRMRRIKIPL--------PPVDERKKI 645
+ K +IL+++ K I SD F N F ++ R+K+ + P + E ++
Sbjct: 644 ALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQK 703
Query: 646 VEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
VED DR+ ++AA+VRIMK+RK L H LV+E +QL F P IK+R+E LI R
Sbjct: 704 VED---DRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIER 760
Query: 706 DYLERDKENPNMFRYLA 722
+YL RD+ + ++Y+A
Sbjct: 761 EYLARDEHDHRAYQYIA 777
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 601 (216.6 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 155/568 (27%), Positives = 280/568 (49%)
Query: 5 TID---LDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
TID + Q W+ +++ I +++R S S EE LY Y M H + ++
Sbjct: 21 TIDEQYVTQTWELLKRAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGER 69
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY+ K +++++S+ + + + L + + WA+H V + + Y+DR ++A
Sbjct: 70 LYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVA 129
Query: 122 RRS--LPALNEVGLTCFREQIDKERE-GEQIDRALL-----------------KNVLDIF 161
+ + LP N +GL +R +I ++ G++I ALL KN D+
Sbjct: 130 QNNHVLPVYN-LGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKNACDML 188
Query: 162 VEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWIL--EDSCPEYMIKAEECLKKERDRV 219
+ +G+ YE +FE +L++T YY NW+ D+C Y+ + E + E R
Sbjct: 189 ISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRA 247
Query: 220 SHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPK 279
S YL +E K+++ + ++ + ++ + G + +L K+EDL+R++R++ +I
Sbjct: 248 SRYLDKMTEAKILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGD 307
Query: 280 GLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTN 339
+ K + A L + + N+ V + ++++L D + +T
Sbjct: 308 SVTVPGGGLKALLKAVSEYLNETGSNIVKNEDLLKNPVN---FVNELLQLKDYFSSLLTT 364
Query: 340 CFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEK 399
F + F + FE F N S E +A + D++L+ G + +SD ++ L+
Sbjct: 365 AFADDRDFKNRFQHDFETFLNS---NRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDN 420
Query: 400 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMV 459
V+ L Y+ +KD+F +++++ LA+RLL D+S +DD E+++L KLK +CG QFT K+E M
Sbjct: 421 VMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMF 480
Query: 460 TDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVF 519
D L TSF ++ Q ID+S+ VLT G WP+ + + + LP E+ E+F
Sbjct: 481 RDKELWLTLATSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMF 539
Query: 520 KGFYETKTKHRKLTWIYSLGQCNINGKF 547
+Y K RKLT LG ++ F
Sbjct: 540 TQYYTEKHTGRKLTINTLLGNADVKATF 567
Score = 279 (103.3 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 71/197 (36%), Positives = 111/197 (56%)
Query: 537 SLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 596
S G+ K E K ++ V+T+Q LL FN +R+S ++M +L + +L R L SL
Sbjct: 586 SSGESMKERKPEHKILQ--VNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSL 643
Query: 597 SCAK--YKILLKEPNTK-TISQSDHFEFNSKFTDRMRRIKIPL--------PPVDERKKI 645
+ K +IL+++ K I SD F N F ++ R+K+ + P + E ++
Sbjct: 644 ALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQK 703
Query: 646 VEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
VED DR+ ++AA+VRIMK+RK L H LV+E +QL F P IK+R+E LI R
Sbjct: 704 VED---DRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIER 760
Query: 706 DYLERDKENPNMFRYLA 722
+YL RD+ + ++Y+A
Sbjct: 761 EYLARDEHDHRAYQYIA 777
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 214/621 (34%), Positives = 344/621 (55%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---------YEKDFEE 178
LN+ + ++KER GE I+ L+ V+ +VE+G+ + D+ Y++ FE
Sbjct: 173 LNKQVTNAVLKLVEKERNGETINTRLVSGVVQSYVELGLNEDDAFVKGPTLSVYKEYFEA 232
Query: 179 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHE 238
L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L K + +
Sbjct: 233 QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCE-Q 291
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
+L+ E+ E LL DK EDL RMY L +I GL + + + HI +G
Sbjct: 292 VLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQGLA 348
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL-KEAFEI 357
+++ D+A N ++ ++ +++H KY V + F N F AL K A
Sbjct: 349 AIEKCGDSALND--------PKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKVACGR 400
Query: 358 FCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDK 410
F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ + YI DK
Sbjct: 401 FINNNAVTRMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVFKYIEDK 458
Query: 411 DLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQT 470
D+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ ++++
Sbjct: 459 DVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNE 518
Query: 471 SFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHR 530
F+++LSN++ +D S+ VL++G WP +S LPSE+ + + F FY ++ R
Sbjct: 519 QFKKHLSNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGR 576
Query: 531 KLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLV 590
KLTW+Y L + + + L ST+Q A LL FNT + S ++ + D LV
Sbjct: 577 KLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQFNTENCYSVQQLADSTQIKTDILV 636
Query: 591 RLLHSLSCAKYKILLKEPNTKTISQSDH-----FEFNSKFTDRMRRIKIPLPPVDERKKI 645
++L L K K+L+ E I + D + + ++ R+ I +P E+K+
Sbjct: 637 QVLQIL--LKSKLLVLEDENANIDEMDFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQE 694
Query: 646 VE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMED 701
E ++++DR+ I AA+VRIMK RKVL HQQL++E + QLS FKP + IKK ++
Sbjct: 695 QETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDI 754
Query: 702 LITRDYLERDKENPNMFRYLA 722
LI ++YLER + + YLA
Sbjct: 755 LIEKEYLERVDGEKDTYSYLA 775
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 534 (193.0 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 115/358 (32%), Positives = 203/358 (56%)
Query: 191 KASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEK 250
++ ++ E+S Y+ K E + +E +RV H L S+E +V+ V+ EL+ + ++E
Sbjct: 2 ESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEM 61
Query: 251 EQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQ 310
E SG +L+ K EDL+ MY+L+ ++P GL+ + ++ +G LV + +
Sbjct: 62 ENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSE-------E 114
Query: 311 GGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSE 370
G V I+ +++L ++ ++ F N LF + + FE F N S S E
Sbjct: 115 GEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNL---NSRSPE 168
Query: 371 LLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 430
L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S
Sbjct: 169 YLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 227
Query: 431 ANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSV 490
+DD E+++++KLK +CG QFTSK+EGM D++++ F ++L + G+DL+V
Sbjct: 228 VSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTV 287
Query: 491 TVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF 547
VLTTG+WP+ ++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 288 RVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 337 (123.7 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 359 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 417
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 418 CGKPTQRVLTKEPKSKEIKNGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 477
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 478 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 537
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 538 RTPEDRKVYTYVA 550
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 804 (288.1 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 194/600 (32%), Positives = 325/600 (54%)
Query: 143 EREGEQIDRALLKNVLDIFVEI-GMGQMDS-YEKDFEEHMLQDTGAYYSRKASNWILEDS 200
ER+G I+R L+ + LD+ + + ++ Y+ F L T +Y ++S I
Sbjct: 193 ERKGNTINRPLINDCLDMLNSLPSENKKETLYDVLFAPKFLSYTRNFYEIESSTVIGVFG 252
Query: 201 CPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLR 260
EY+ KAE+ ++E++R +YL + L+ V+ ELL + +LLE + +G +++
Sbjct: 253 VVEYLKKAEKRFEEEKERSKNYLFTKIASPLLSVVEDELLSKHLDDLLENQSTGFFSMID 312
Query: 261 EDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVL---VQQAEDAATNQGG-SSGA 316
E L +Y + ++ G++ + +++ G ++ QA + G SS A
Sbjct: 313 SSNFEGLQLVYESFSRVELGVKSLKKYLAKYVAHHGKLINETTSQALEGKMAVGRLSSNA 372
Query: 317 VQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFC 376
+ ++K++ L D+ ++ +L +AF F + G + + E ++ F
Sbjct: 373 TMATLWVQKVLALWDRLNTIISTTMDADRSILNSLSDAFVTFVD---GYTRAPEYISLFI 429
Query: 377 DNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHE 436
D+ LKK + + + +IE TL+ V L +IS+KD+F ++Y+ LA+RLL +RS + D E
Sbjct: 430 DDNLKKDARKAI-EGSIEATLQNSVTLFRFISEKDVFEKYYKTHLAKRLLNNRSISSDAE 488
Query: 437 RSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNN--QNAHPGIDLSVTVLT 494
++++LKQ+ G FT K+EGM D+ L++E +EY N+ Q+A P +DL+V++L
Sbjct: 489 LGMISRLKQEAGNVFTQKLEGMFNDMNLSQE---LLQEYKHNSALQSAKPALDLNVSILA 545
Query: 495 TGFWP---SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKN 551
+ FWP S N P ++ ++ F FY +K RKL W S+G ++ F+ +
Sbjct: 546 STFWPIDLSPHKIKCNFPKVLLAQIDQFTDFYLSKHTGRKLLWYPSMGSADVRVNFKDRK 605
Query: 552 IELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP 608
+L VST + LLLF + L + EI+ + N+ DL R L SL+CAKYKILLK+P
Sbjct: 606 YDLNVSTIASVILLLFQDLKENQCLIFEEILEKTNIEVGDLKRNLQSLACAKYKILLKDP 665
Query: 609 NTKTISQSDHFEFNSKFTDRMRRIKIP------LPPVDERKKIVEDVDKDRRYAIDAALV 662
+ ++ D F FN F + RIKI + ERK+ +E VD+ R++ DA +V
Sbjct: 666 KGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIV 725
Query: 663 RIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
R+MK RKV H QL++E QL+ F P IK+R+E LI R+YL+R +N ++ YLA
Sbjct: 726 RVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
Score = 56 (24.8 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 24/114 (21%), Positives = 44/114 (38%)
Query: 6 IDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDK 65
+D W+ +Q+ I + + S S EE LY Y + H Y ++LY+
Sbjct: 20 VDFATHWEVLQRAIGDIFQ----KSTSQLSFEE---LYRNAYILVL----HKYGEKLYNH 68
Query: 66 YKQAFEEYISSMVLPSLSEKHDEYML-RELVKRWANHKVMVRWLSRFFHYLDRY 118
+ + +P++ + +D +L L+ N W SR R+
Sbjct: 69 VQDVIRSRLKEETVPAIYKNYDASLLGNALLDIRKNDSYSTSW-SRSLEAAHRF 121
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 222/696 (31%), Positives = 358/696 (51%)
Query: 42 LYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHD-EYMLRELVKRWAN 100
LY + N+C H +LYD+ ++ EE+IS+ + + + D L + K W +
Sbjct: 119 LYQAVDNLCL----HKLDGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCWQD 174
Query: 101 HKVMVRWLSRFFHYLDR-YFIARRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLD 159
+ + LDR Y I ++ +L E+GL FR+ + E EQ +K +L
Sbjct: 175 FCDQMLMIRSIALTLDRKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQ---RTVKGLLS 231
Query: 160 IFVEIGMGQMDSYEKDFEEHMLQDTGAY--YSRKASNWILEDSCPEYMIKAEECLKKERD 217
+ + + + + + H+L+ A Y LE + Y AE ++
Sbjct: 232 MIEKERLAE--AVNRTLLSHLLKMFTALGIYMESFEKPFLEGTSEFYA--AEGMKYMQQS 287
Query: 218 RVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGC--RALLREDKVEDLSRMYR--L 273
V YL E +L E ++E ++Y + K R LL + L + + +
Sbjct: 288 DVPEYL-KHVEGRLHE--ENERCILYIDAVTRKPLITTVERQLLERHILVVLEKGFTTLM 344
Query: 274 YHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQV---LIRKIIELH 330
+ + L+ + +F + E ++QA + + G + E+ +++ +++
Sbjct: 345 DGRRTEDLQRMQTLFSRVNALES---LRQALSSYVRKTGQKIVMDEEKDKDMVQSLLDFK 401
Query: 331 DKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSD 390
F + F +K++FE N + + +EL+A F D L+ GN+ S+
Sbjct: 402 ASLDIIWEESFYKNESFGNTIKDSFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSE 458
Query: 391 EAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQ 450
E +E LEKV+ L +I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG Q
Sbjct: 459 EELESVLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQ 518
Query: 451 FTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPS 510
FT+K+EGM D+ L++E SF++ GI++SV VLTTG+WP+Y D+ LP
Sbjct: 519 FTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPH 578
Query: 511 EMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTS 570
E+ ++FK FY +K R+L W SLG C + F + EL VS +QA L+LFN +
Sbjct: 579 ELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDA 638
Query: 571 DRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMR 630
+LS+ +I ++ +L R L SL+C K ++L K P + + D FEFN +F +
Sbjct: 639 MKLSFEDIKDSTSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLY 698
Query: 631 RIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSR 686
RIK+ V+E E V +DR+Y IDAA+VRIMK+RKVL H L++E +QL
Sbjct: 699 RIKVNAIQMKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKF 758
Query: 687 MFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
KP +KKR+E LI R+YLER+K NP ++ YLA
Sbjct: 759 PIKP--ADLKKRIESLIDREYLEREKSNPQIYNYLA 792
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 766 (274.7 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 182/597 (30%), Positives = 303/597 (50%)
Query: 139 QIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKASN 194
+I +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++ASN
Sbjct: 166 EIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASN 225
Query: 195 WILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSG 254
+ E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 226 LLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE--- 281
Query: 255 CRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
C ++R++K D++ MY L + GL + + HI EG +A T +
Sbjct: 282 CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIQDEGL----RATSNLTQEN--- 334
Query: 315 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELL 372
+ + ++E+H K+++ + F AL +A N S + ELL
Sbjct: 335 ---MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELL 391
Query: 373 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 432
A +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S +
Sbjct: 392 AKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMS 450
Query: 433 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVT 491
D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI +
Sbjct: 451 MDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIY 510
Query: 492 VLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 511 VLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLG 570
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPN 609
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 571 KPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSE 628
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIM 665
+ I F N F+ + + KI + + +E VD+DR+ + AA+VRIM
Sbjct: 629 KEDIDTESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIM 688
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
K+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 689 KARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
Score = 70 (29.7 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W+ K +T +K + LE + + ++ ++ IY +C P ++
Sbjct: 6 RVVDFDETWN---KLLTTIKAVVMLEYVERATWNDR-----FSDIYALCVAYP-EPLGER 56
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY + K E ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 57 LYTETKIFLENHVRHLHKRVLES--EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIK 114
Query: 122 RRSL 125
+ L
Sbjct: 115 KNKL 118
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 765 (274.4 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 182/597 (30%), Positives = 303/597 (50%)
Query: 139 QIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKASN 194
+I +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++ASN
Sbjct: 166 EIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASN 225
Query: 195 WILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSG 254
+ E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 226 LLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE--- 281
Query: 255 CRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
C ++R++K D++ MY L + GL + + HI EG +A T +
Sbjct: 282 CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGL----RATSNLTQEN--- 334
Query: 315 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELL 372
+ + ++E+H K+++ + F AL +A N S + ELL
Sbjct: 335 ---MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELL 391
Query: 373 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 432
A +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S +
Sbjct: 392 AKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMS 450
Query: 433 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVT 491
D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI +
Sbjct: 451 MDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIY 510
Query: 492 VLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 511 VLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLG 570
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPN 609
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 571 KPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSE 628
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIM 665
+ I F N F+ + + KI + + +E VD+DR+ + AA+VRIM
Sbjct: 629 KEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIM 688
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
K+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 689 KARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
Score = 70 (29.7 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W+ K +T +K + LE + + ++ ++ IY +C P ++
Sbjct: 6 RVVDFDETWN---KLLTTIKAVVMLEYVERATWNDR-----FSDIYALCVAYP-EPLGER 56
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY + K E ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 57 LYTETKIFLENHVRHLHKRVLES--EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIK 114
Query: 122 RRSL 125
+ L
Sbjct: 115 KNKL 118
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 764 (274.0 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 182/597 (30%), Positives = 303/597 (50%)
Query: 139 QIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKASN 194
+I +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++ASN
Sbjct: 166 EIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASN 225
Query: 195 WILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSG 254
+ E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 226 LLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE--- 281
Query: 255 CRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
C ++R++K D++ MY L + GL + + HI EG +A T +
Sbjct: 282 CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGL----RATSNLTQEN--- 334
Query: 315 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELL 372
+ + ++E+H K+++ + F AL +A N S + ELL
Sbjct: 335 ---MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELL 391
Query: 373 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 432
A +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S +
Sbjct: 392 AKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMS 450
Query: 433 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVT 491
D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI +
Sbjct: 451 MDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIY 510
Query: 492 VLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 511 VLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLG 570
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPN 609
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 571 KPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSE 628
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIM 665
+ I F N F+ + + KI + + +E VD+DR+ + AA+VRIM
Sbjct: 629 KEDIDVESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIM 688
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
K+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 689 KARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
Score = 69 (29.3 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 25/124 (20%), Positives = 53/124 (42%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W K +T +K + LE + + ++ ++ IY +C P ++
Sbjct: 6 RVVDFDETWS---KLLTTIKAVVMLEYVERATWNDR-----FSDIYALCVAYP-EPLGER 56
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY + K E ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 57 LYTETKIFLENHVRHLHKRVLES--EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIK 114
Query: 122 RRSL 125
+ L
Sbjct: 115 KNKL 118
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 754 (270.5 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 207/720 (28%), Positives = 372/720 (51%)
Query: 37 EEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEY-ISSMVLPSLSEKHDEYMLRELV 95
EEY+ Y + +C +K + L Y +E + ISS V+ + + + +R +
Sbjct: 89 EEYVKAY--VIAVC-EKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHWIRREL 145
Query: 96 KRWANHKVMVRWLSRFFHYLDRYFIARRSL-PALNEVGLTCFREQIDKEREGEQIDRALL 154
+ MV L+ + +R+L L + + E I ER G I+ +
Sbjct: 146 DEGHENIYMVYTLA--------LVVWKRNLFNDLKDKVIDAMLELIRSERTGSMINSRYI 197
Query: 155 KNVLDIFVEIGMGQMDS-------------YEKDFEEHMLQDTGAYYSRKASNWILED-S 200
V++ VE+G+ ++ Y++ FE L+ T +Y+++A+N++ +
Sbjct: 198 SGVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGN 257
Query: 201 CPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLR 260
+YMIK E L +E DR YL+SS++ L + +L+ + L++ G LL
Sbjct: 258 VTDYMIKVETRLNQEDDRCQLYLNSSTKTPLATCCE-SVLISNQLDFLQRHFGG---LLV 313
Query: 261 EDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEG-TVLVQQAEDAATNQGGSSGAVQE 319
+ + +DLSRM++L ++P GL+ + + HI EG L + A +AAT+
Sbjct: 314 DKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDA--------- 364
Query: 320 QVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNK-AVGG--------SSSSE 370
++ ++ ++E+H++Y V F N F ++L +A F N AV + S+E
Sbjct: 365 KLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAE 424
Query: 371 LLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR 429
LLA +CD +L+K + K+ DEA +EE K++ + YI DKD+F++FY K ++RL+ +
Sbjct: 425 LLARYCDQLLRK--SSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISEL 482
Query: 430 SANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLS 489
SA+D+ E + +TKLK CG ++T+++ MV D ++++ F+E ++ ++ +
Sbjct: 483 SASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKAD-MLGQKSVEFN 541
Query: 490 VTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
V VL++G WP++ ++ + LP ++ K +E+F FY K R+LTW+YS + I
Sbjct: 542 VLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFP 601
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDD---LV-RLLHSLSCAKYKILL 605
K +T Q T+LLFN D + +I + +V L+ +L L
Sbjct: 602 KKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQ 661
Query: 606 KE---PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALV 662
KE P T T+S + + N K + + + V + + + ++V++DR+ I A +V
Sbjct: 662 KEDEVPMTATVSLNKAY-MNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIV 720
Query: 663 RIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
RIMK+RK + HQQL++E + QLS FKP ++ IK+ + LI ++Y+ R + +++ YLA
Sbjct: 721 RIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
Score = 65 (27.9 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 3 RKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT 51
R T D + W +Q G+ R E + +P ++YM LYT++Y+ CT
Sbjct: 8 RMTCDSEVVWKKLQDGLDVAYR-RENM--AP---KDYMTLYTSVYDYCT 50
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 745 (267.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 180/598 (30%), Positives = 301/598 (50%)
Query: 138 EQIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKAS 193
++I +R GE ++ ++ V++ FV + + + Y++ FE L TG YY ++AS
Sbjct: 184 KEIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFEGPFLTKTGEYYKQEAS 243
Query: 194 NWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQS 253
N + E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 244 NLLQESNCSQYMEKVLGRLKDEEVRCRKYLHPSSYSKVIHECQQRMVADHL-QFLHGE-- 300
Query: 254 GCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGS 313
C+ ++R++K +D++ MY L + GL + + HI EG A N
Sbjct: 301 -CQNIIRQEKRDDMANMYTLLRAVSSGLPHMIQELQVHIHDEGI-------RATINLSQE 352
Query: 314 SGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSEL 371
+ + + ++E+H K+++ + F AL +A N S + EL
Sbjct: 353 N---MPTLFVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPEL 409
Query: 372 LATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSA 431
LA +CDN+LKK + +++ +E+ L + + YI DKD+F + Y + LA+RL+ S
Sbjct: 410 LAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKIYARMLAKRLIHGLSL 468
Query: 432 NDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSV 490
+ D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ + GI +
Sbjct: 469 SMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSTDLNNKFNNFIKTQETVVDLGISFQI 528
Query: 491 TVLTTGFWP--SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 548
VL G WP SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 529 YVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQHFSGRKLTWLHYLCTGEVKMNYL 588
Query: 549 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP 608
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 589 SKPYVAVVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELQKTIKSL--LDVKMISHDL 646
Query: 609 NTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRI 664
+ I F FT + + KI + + +E VD+DR+ + AA+VRI
Sbjct: 647 QKEEIEPESTFSLIMSFTSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRI 706
Query: 665 MKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
MK+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 707 MKARKVLRHNALIQEVINQSKARFNPSISMIKKCIEVLIDKQYIERSQSSADEYSYVA 764
Score = 69 (29.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 23/124 (18%), Positives = 54/124 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W+ K +T ++ + L+ + + ++ ++ IY +C P ++
Sbjct: 25 RVVDFDETWN---KLLTTIRAVVMLDYVERATWNDR-----FSDIYALCVAYP-EPLGEK 75
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY + K E ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 76 LYTETKVFLENHVRQLFKRVLES--EEKVLVMYHRYWEEYSKGAEYMDCLYRYLNTQFIK 133
Query: 122 RRSL 125
+ L
Sbjct: 134 KNKL 137
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 647 (232.8 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 179/653 (27%), Positives = 324/653 (49%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKP-PH-DY 58
+ R+ ID + W + + K IL G + M LY +Y +C +P P+ +
Sbjct: 5 LGRQDIDFNTIWKNIADQVYK---ILTGS-----QNVSAMFLYEDVYKLCIAQPQPYCEP 56
Query: 59 SQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLR--------ELVKRWANHKVMVRWLSR 110
+ K+ + + I ++L + S+ EY+ + EL + + + W+++
Sbjct: 57 LYENIKKFFEQHVDQILLIILDTKSDTISEYLKQWKLFFSGCELCNKVIFRYLNLNWINK 116
Query: 111 ------FFHYLDRYFIA--------RRSLPALNEVGLTCFREQIDKEREGEQIDRALLKN 156
F H D Y I R + + L C I K+R+GE + +
Sbjct: 117 KILDKKFGHPPDVYEIQILGLMIWKERLFFKIKDRVLKCVEILIQKDRDGELVQHQFISQ 176
Query: 157 VLDIFVEIGMGQMDS--YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKK 214
++ +++ D Y ++E L++T +Y+R++ +I YM KAE + +
Sbjct: 177 FMESLIKLDSVDKDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDE 236
Query: 215 ERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLY 274
E R YL+SSS K+ ++ H +L+ ELL+ E C L+++K++++ MY+L
Sbjct: 237 EEQRSQKYLNSSSHDKM-RRLLHSILIEKHKELLQSE---CINYLKDEKLDEIYNMYKLL 292
Query: 275 HKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYM 334
+I GL PV +++I G ++ D N ++ + +++++ ++
Sbjct: 293 SRIEGGLAPVLETVQKYIQHVGIDAIKSIPDR-NNP-------DPKIYVETLLKIYLQFS 344
Query: 335 EYVTNCFINHTLFHKALKEA-FEIFCNKAV--GGSSSSELLATFCDNILKKGGNEKLSDE 391
+ F N F L A +IF + + S ELLA +CD +LKKG N++ +
Sbjct: 345 SIIKKSFNNDVSFITVLDLACHKIFNQNHITRNTTKSPELLAKYCDMLLKKG-NKQHEEI 403
Query: 392 AIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQF 451
+EE L +++ L Y+ DKD+F +FY K L+RRL+ S +DD E+ ++T LKQ CG ++
Sbjct: 404 ELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLKQACGFEY 463
Query: 452 TSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSY-KSSDLNLPS 510
TSK + M D+TL+ E F+ +L N + ID S+ VLT+G W + ++S +P
Sbjct: 464 TSKFQRMFNDITLSAETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQ 523
Query: 511 EMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTS 570
E+ C+ F+ +Y T+ + RKL W++ L + F +K+ + V+ +Q LL+FNT
Sbjct: 524 ELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQ 583
Query: 571 DRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNS 623
+ +S EI NL ++L R L SL AK ++ K+ + +I+ +++ N+
Sbjct: 584 ESVSLEEITKFTNLNENELSRTLQSLIEAKI-LISKKKDQNSINNNNNNNNNN 635
Score = 165 (63.1 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 34/120 (28%), Positives = 69/120 (57%)
Query: 607 EPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDE----RKKIVEDVDKDRRYAIDAALV 662
+P++ + S + + NS ++++ ++K+ E ++ + +D+DR+ + A++V
Sbjct: 653 QPSSSS-SSTQEYTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQASIV 711
Query: 663 RIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
RIMK+RK + H L+ E +E F+P+I IKK +E LI ++Y+ R + + + Y A
Sbjct: 712 RIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 748 (268.4 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 182/599 (30%), Positives = 304/599 (50%)
Query: 139 QIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKASN 194
+I +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++ASN
Sbjct: 166 EIKNDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEASN 225
Query: 195 WILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSG 254
+ E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 226 LLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFLHAE--- 281
Query: 255 CRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
C ++R++K D++ MY L + GL + + HI EG A +N +
Sbjct: 282 CHNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGL-------RATSNLSQEN 334
Query: 315 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELL 372
Q + ++E+H K+++ + F AL +A N S + ELL
Sbjct: 335 MPTQ---FVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPELL 391
Query: 373 --ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 430
A +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S
Sbjct: 392 ELAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLS 450
Query: 431 ANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLS 489
+ D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI
Sbjct: 451 MSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQ 510
Query: 490 VTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF 547
+ VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 511 IYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY 570
Query: 548 EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKE 607
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 571 LCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHD 628
Query: 608 PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVR 663
+ + + F N F+ + + KI + + +E VD+DR+ + AA+VR
Sbjct: 629 SDKEDVEAESTFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVR 688
Query: 664 IMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
IMK+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 689 IMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 747
Score = 60 (26.2 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 24/124 (19%), Positives = 54/124 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W+ K +T +K + L+ + + ++ ++ IY +C P ++
Sbjct: 7 RVVDFDETWN---KLLTTIKAVVMLDYVERATWNDR-----FSDIYALCVAYP-EPVRRE 57
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
Y + K FE ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 58 PYTETK-IFENHVHHLHKRVLES--EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIK 114
Query: 122 RRSL 125
+ L
Sbjct: 115 KNKL 118
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 765 (274.4 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 182/597 (30%), Positives = 303/597 (50%)
Query: 139 QIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKASN 194
+I +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++ASN
Sbjct: 109 EIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASN 168
Query: 195 WILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSG 254
+ E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 169 LLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE--- 224
Query: 255 CRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
C ++R++K D++ MY L + GL + + HI EG +A T +
Sbjct: 225 CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGL----RATSNLTQEN--- 277
Query: 315 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELL 372
+ + ++E+H K+++ + F AL +A N S + ELL
Sbjct: 278 ---MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELL 334
Query: 373 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 432
A +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S +
Sbjct: 335 AKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMS 393
Query: 433 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVT 491
D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI +
Sbjct: 394 MDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIY 453
Query: 492 VLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 454 VLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLG 513
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPN 609
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 514 KPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSE 571
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIM 665
+ I F N F+ + + KI + + +E VD+DR+ + AA+VRIM
Sbjct: 572 KEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIM 631
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
K+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 632 KARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 688
Score = 37 (18.1 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 95 VKRWANHKVMVRWLSRFFHYLDRYFIARRSL 125
++ W + ++ + YL+ FI + L
Sbjct: 31 IRYWEEYSKGADYMDCLYRYLNTQFIKKNKL 61
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 179/369 (48%), Positives = 233/369 (63%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYS-QQL 62
+ I ++GW +QKGITKL RILEG PE F E LYT IY+MC Q+ + +
Sbjct: 10 RQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQRSDYSQQLYEK 69
Query: 63 YDKYKQAF--EEYISSMVLPSLSEKHDEYMLR----ELVKRWANHKVMVRWLSRFFHYLD 116
Y K + + + + S+ + E + R +++ +W + K V ++ R H +
Sbjct: 70 YRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLS-KFFV-YIDR--HLVR 125
Query: 117 RYFIARRSLPALNEVGLTCFREQ----------------IDKEREGEQIDRALLKNVLDI 160
R ++ +P+L+EVGLTCF + I KEREGEQIDRAL+KNVLDI
Sbjct: 126 R---SKIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDI 182
Query: 161 FVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVS 220
+VE GMG ++ YE+DFE MLQDT +YYSRKAS W EDSCP+YMIK EECLK ER+RV+
Sbjct: 183 YVENGMGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVT 242
Query: 221 HYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKG 280
HYLHS +EPKLVEK+Q+ELLV+ LE E SG ALLR+DK DLSR+YRLY IPK
Sbjct: 243 HYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPKR 302
Query: 281 LEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNC 340
L VA++FK+HIT EG L++QA+D TNQ +IELH+K++ YV C
Sbjct: 303 LGRVADLFKKHITEEGNALIKQADDKTTNQ--------------LLIELHNKFIVYVIEC 348
Query: 341 FINHTLFHK 349
F NHTLFHK
Sbjct: 349 FQNHTLFHK 357
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 437 (158.9 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 105/309 (33%), Positives = 170/309 (55%)
Query: 318 QEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCD 377
+E LI+ +++ D+ ++ F + L ALKE+FE F N + +EL+A F D
Sbjct: 366 KEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQ--NKPAELVARFID 423
Query: 378 NILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 437
+ LK GG +++S+E +E L K + L YI KD+F FY++ L++RLL D+S + D E+
Sbjct: 424 SKLKVGG-KRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEK 482
Query: 438 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGF 497
S+++KLK +CG FT+K+E M D+ L+ + SF + QN I++++ VLT+G
Sbjct: 483 SMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFRDS-PMTQN-FKSIEMNIYVLTSGN 540
Query: 498 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVS 557
WP + LP E ++ EVF FY +K + L W +L C + F Q EL VS
Sbjct: 541 WPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVS 600
Query: 558 TYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTIS 614
+Q L LFN LS+ +I L +L + L SL +K IL+++ ++ + +
Sbjct: 601 LFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSN 660
Query: 615 QSDHFEFNS 623
S + N+
Sbjct: 661 TSSNTSSNT 669
Score = 235 (87.8 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 52/117 (44%), Positives = 76/117 (64%)
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIM 665
TK I ++D F FNSKF+ ++ +IK+ V+E +K E++ DR+Y +DAA+VRIM
Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIM 747
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
K+RK L H L+SE V L F+P +KKR+E LI ++YL RD EN ++ Y+A
Sbjct: 748 KTRKTLAHNLLISELVSLLK--FQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
Score = 220 (82.5 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 76/322 (23%), Positives = 153/322 (47%)
Query: 9 DQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQ 68
D W+ + IT + + + EE LY + N+C K + LY+K
Sbjct: 68 DSSWNKLSSAITSINM----KQATTLTQEE---LYKMVENLCFDKI---LASNLYNKISV 117
Query: 69 AFEEYISSMVLPS-LSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-- 124
E++I+ + L+ D + L+ + W +H + + F YLDR ++ + S
Sbjct: 118 QIEKHITLTIKHLVLTMSSDPIIFLKSINSIWKDHTNQMIMIRSIFLYLDRTYVIQNSNT 177
Query: 125 LPALNEVGLTCF-----------REQIDK-------EREGEQIDRALLKNVLDIFVEIGM 166
+ ++ ++GL F R+ ID EREG++IDR L+ +++ + +
Sbjct: 178 VKSIWDLGLFYFGNNLSQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKM-----L 232
Query: 167 GQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSS 226
++ Y K FE +++T +Y + ++ I E P Y+ E L +E +R+ YL S
Sbjct: 233 SSLNIYTK-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQS 291
Query: 227 SEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVAN 286
++ +L+ + +L+ + +LEK G A++ D++EDL ++Y+L + + + ++ +
Sbjct: 292 TKKQLMAVLDRQLIERHVDVILEK---GFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIKE 347
Query: 287 VFKQHITAEGTVLVQQAEDAAT 308
++ +I G ++ E AT
Sbjct: 348 SWQSYIKQTGIQMLNDKEKEAT 369
Score = 52 (23.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 38/161 (23%), Positives = 69/161 (42%)
Query: 325 KIIELHDK-YMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKG 383
KI E+ Y++YV +N + L E K + +L+ D IL+KG
Sbjct: 260 KINEIETPMYLKYVCER-LNQE--GERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEKG 316
Query: 384 GNEKLSDEAIEETLEKVVKLLAYISDKDLFAEF---YRKKLARRLLFDRSANDDHERSIL 440
N ++ + +E+ L K+ +LL + + E Y K+ ++L D+ + +L
Sbjct: 317 FNAMVNGDRLED-LGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEATLIQDLL 375
Query: 441 TKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
K + + S+ LT A + SFE +++ QN
Sbjct: 376 D-YKDRLD-RILSQSFSKNELLTYALKE--SFEYFINTKQN 412
Score = 46 (21.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 33/165 (20%), Positives = 68/165 (41%)
Query: 65 KYKQAFEEYISSMVLPSLSEKHDEYML------------RELVKRWANHKVMVRWLSRFF 112
K K++++ YI + L++K E L R L + ++ ++++ L F
Sbjct: 344 KIKESWQSYIKQTGIQMLNDKEKEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESF 403
Query: 113 HYLDRYFIARRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEI-GMGQMDS 171
Y + +++ PA + ++ +R E+ +L L +F I G ++
Sbjct: 404 EY---FINTKQNKPAELVARFIDSKLKVGGKRMSEEELETVLNKSLILFRYIQGKDVFEA 460
Query: 172 -YEKDFEEHMLQDTGAYY-SRKASNWILEDSC-PEYMIKAEECLK 213
Y++D + +L D + K+ L+ C + K EE K
Sbjct: 461 FYKQDLSKRLLLDKSTSIDAEKSMISKLKTECGTTFTAKLEEMFK 505
Score = 41 (19.5 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 366 SSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRL 425
S S L D++L E+ DE + + +VK+L+ ++ F + K+ R
Sbjct: 194 SQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSLNIYTKFEIEFIKETNR-- 251
Query: 426 LFDRSANDD-HERSILTKLKQQC 447
+D N +E LK C
Sbjct: 252 FYDMEGNSKINEIETPMYLKYVC 274
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 215/716 (30%), Positives = 363/716 (50%)
Query: 37 EEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEY-ISSMVLPSLSEKHDEYMLRELV 95
E+++ Y + + T+ + L +Y + ++ Y SS VL + Y+ R V
Sbjct: 83 EQFLKSYLS--ELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGICN----YLNRNWV 136
Query: 96 KRWANHKVMVRWLSRFFHYLDRYFIARRS--LPALNEVGLTCFREQIDKEREGEQIDRAL 153
KR + + + + +A + LNE + I++ER+G+ I+R+L
Sbjct: 137 KRECEEGQ--KGIYKIYRLA---LVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSL 191
Query: 154 LKNVLDIFVEIGMGQMDS---------YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEY 204
+++V++ +VE+ + D+ Y+++FE + DT A+Y +++ ++ ++ EY
Sbjct: 192 VRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEY 251
Query: 205 MIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKE----QSGCRALLR 260
+ E L++E RV + + L E L L+EK + + LL
Sbjct: 252 LKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLN 311
Query: 261 EDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQ 320
D+ +DL RMY L K L + ++ + HI +GT + A+ T+ A +
Sbjct: 312 ADRNDDLKRMYSLVALSSKNLTDLKSILENHILHQGTEAI--AKCCTTD-----AANDPK 364
Query: 321 VLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAV-----GGSSSSELLATF 375
++ I+++H KY V F N F AL +A F N V S S ELLA +
Sbjct: 365 TYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKFINSNVVTIANSASKSPELLAKY 424
Query: 376 CDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDH 435
CD +LKK D+ +E+ L +V+ + YI DKD+F ++Y K LA+RL+ SA+DD
Sbjct: 425 CDLLLKKSSKNP-EDKELEDNLNQVMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDA 483
Query: 436 ERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTT 495
E +++KLKQ CG ++T K++ M D+ ++++ + F++YL+ +N ID + VL++
Sbjct: 484 EAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLNSYFKQYLAE-KNLTMEIDFGIEVLSS 542
Query: 496 GFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL--GQCNIN-GKFEQKNI 552
G WP S++ LPSE+ + V F FY + RKL W+Y + G+ +N +
Sbjct: 543 GSWPFQLSNNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTY 602
Query: 553 ELIVSTYQAATLLLFNTSDRLSYS--EIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNT 610
L ST+Q + LL FN D+LS++ ++ ++L+++L L K K+L N
Sbjct: 603 TLQASTFQMSVLLQFN--DQLSFTVQQLQDNTQTQQENLIQVLQIL--LKAKVLTSSDNE 658
Query: 611 KTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDK----DRRYAIDAALVRIMK 666
+++ E + ++ RRI I P E K E V K DR+ I AA+VRIMK
Sbjct: 659 NSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMK 718
Query: 667 SRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
RK L H L+SE + QLS FKP + IKK ++ LI ++YLER + + + + YLA
Sbjct: 719 MRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 180/608 (29%), Positives = 306/608 (50%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQD 183
L + + +I +R GE ++ ++ V++ FV + + + Y+ F L +
Sbjct: 155 LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQGIFVSPFLTE 214
Query: 184 TGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVY 243
TG YY ++ASN + E +C +YM K LK E R YLH SS K++ + Q ++ +
Sbjct: 215 TGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADH 274
Query: 244 ATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQA 303
+ L E C +++++++ D++ MY L + GL + ++HI EG +A
Sbjct: 275 L-QFLHSE---CHSIIQQERKNDMANMYVLLRAVSSGLPHMIEELQKHIHDEGL----RA 326
Query: 304 EDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAV 363
T + + + ++E+H K+++ + F AL +A N
Sbjct: 327 TSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 380
Query: 364 GGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
S + ELLA +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + L
Sbjct: 381 PKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARML 439
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N
Sbjct: 440 AKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDT 499
Query: 482 AHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL 538
GI + VL G WP + SS +P E+ K V++F+ FY RKLTW++ L
Sbjct: 500 VIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYL 559
Query: 539 GQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 598
+ + K +V+TYQ A LL FN S+ +SY E+ + +L + + SL
Sbjct: 560 CTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL-- 617
Query: 599 AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRR 654
K++ + + I F N F+ + + KI + + +E VD+DR+
Sbjct: 618 LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRK 677
Query: 655 YAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKEN 714
+ AA+VRIMK+RKVL H L+ E + Q F P I IKK +E LI + Y+ER + +
Sbjct: 678 MYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQAS 737
Query: 715 PNMFRYLA 722
+ + Y+A
Sbjct: 738 ADEYSYVA 745
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 691 (248.3 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 180/585 (30%), Positives = 305/585 (52%)
Query: 153 LLKNVLDIFVEIG----MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKA 208
++ V+ FVE+ G + Y++ FE ML+ +GAYY+ +A+ + S EYM +
Sbjct: 192 IINGVIHSFVEVQDYKKTGSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEV 251
Query: 209 EECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLS 268
L+ E R +LH SS PKL ++ + + + + L S CR ++ E++ +DL
Sbjct: 252 IRILEYESRRAQKFLHVSSLPKLRKECEEKFI----NDRLGFIYSECREMVSEERRQDLR 307
Query: 269 RMYRLYHKIPKGLEP-VANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKII 327
MY + IP L+ + F HI +EG V + G + + + ++
Sbjct: 308 NMYVVLKPIPDNLKSELITTFLDHIKSEGLQTVSALK-------GENIHI---AFVENML 357
Query: 328 ELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSS---SSELLATFCDNILKKGG 384
++H KY E + + F N +LF AL +A N+ S+E +A +CD +LKK
Sbjct: 358 KVHHKYQELIADVFENDSLFLSALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKKS- 416
Query: 385 NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLK 444
K + I++ L + + YI DKD++ +FY + LA+RL+ ++S + D E ++ +LK
Sbjct: 417 --KTCEAEIDQKLTNNITIFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLK 474
Query: 445 QQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP--SYK 502
Q CG +FT+K+ M TD++++ + F +L ++ N GI+L++ VL G WP S +
Sbjct: 475 QACGYEFTNKLHRMFTDISVSVDLNNKFNTHLKDS-NVDLGINLAIKVLQAGAWPLGSTQ 533
Query: 503 SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAA 562
+P E K +++F+ +Y RKLTW++ + + +K+ + + TYQ A
Sbjct: 534 VIPFAVPQEFEKSIKMFEDYYHKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMA 593
Query: 563 TLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFN 622
+LLF T D LS EI L L + + H + K+L +++ ++ E N
Sbjct: 594 IILLFETCDSLSCREIQNTLQLNDETFQK--HMQPIIESKLL--NASSENLAGETRIELN 649
Query: 623 SKFTDRMRRIKIPLPPVDERKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVS 678
+T++ + KI E + VE VD+DR+ + AA+VRIMK+RKVL H L+
Sbjct: 650 LDYTNKRTKFKISSALQKETPQEVEHTINSVDEDRKLFLQAAIVRIMKARKVLKHNALIQ 709
Query: 679 ECVEQLSRM-FKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
E V LS++ F P+I IKK +E LI + Y+ER + + + Y+A
Sbjct: 710 E-VLSLSKVSFTPNIAMIKKCVESLIDKQYIERTANSGDEYSYMA 753
Score = 65 (27.9 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 17/90 (18%), Positives = 42/90 (46%)
Query: 43 YTTIYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLPS-LSE---KHDEY---MLRELV 95
++ +Y +C +P + +LY + K E+++ M+ L E H +L+
Sbjct: 39 FSDVYTLCVAQP-EPMADRLYGETKHFLEQHVQEMLAKKVLIEGECSHSNGGPDLLQRYY 97
Query: 96 KRWANHKVMVRWLSRFFHYLDRYFIARRSL 125
W + +++L + + YL++ I ++ +
Sbjct: 98 ITWMEYSQGIKYLHQLYIYLNQQHIKKQKI 127
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 179/566 (31%), Positives = 305/566 (53%)
Query: 169 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE 228
+ SY+ FE + +++T +Y++++S ++ S +Y+ KAE L +E + V YLH S+
Sbjct: 218 LSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTL 277
Query: 229 PKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVF 288
L+E + ++L+ E+L + + +L ++ ED+ RMYRL + P GL+P+ F
Sbjct: 278 KPLLEATE-DVLIAQHEEVLHNDFA---RMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTF 333
Query: 289 KQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFH 348
++ + G V + Q G V + + ++ + E V F T F
Sbjct: 334 EEFVKRSGFAAVAKI----VPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFT 389
Query: 349 KALKEAFEIFCNKAV----GGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 404
K+L AF N+ V S S ELLA + D+IL+K N+ + + +E+ L ++ +
Sbjct: 390 KSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKS-NKNVDIDDVEDCLSSIIIIF 448
Query: 405 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 464
Y+ DKD+F FY K LA+RL+ S + D E S+L+KLK+ CG ++TSK++ M D++L
Sbjct: 449 RYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISL 508
Query: 465 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFY 523
++E +F + Q+ ID S VL T FWP S + + +LP E+V E F+ +Y
Sbjct: 509 SQEITEAFWQL---PQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYY 565
Query: 524 ETKTKHRKLTWIYSLGQCNINGKFE-QKNIELI--VSTYQAATLLLFNTSDRLSYSEIMT 580
+ RKL+W++ L + I + Q N+ + VSTYQ LLL+N D +Y E+
Sbjct: 566 YSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAK 625
Query: 581 QLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD 640
L+ D L +L+ K K+LL N K + ++ N F + R+++ LP
Sbjct: 626 ITGLSTDFLTGILNIF--LKAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRS 683
Query: 641 ERKK----IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 696
E+K+ + +++DR+ + +A+VRIMK+R+ L H LV E ++Q+ F P + IK
Sbjct: 684 EQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIK 743
Query: 697 KRMEDLITRDYLERDKENPNMFRYLA 722
+ ++ LI ++YLER + + + YLA
Sbjct: 744 QCIDMLIEKEYLER--QGRDEYIYLA 767
Score = 140 (54.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 116/546 (21%), Positives = 224/546 (41%)
Query: 3 RKTIDLDQGWDYMQKGITKL-KRILEGLPESPFSSEEYMMLYTTIYNMCTQKPP----HD 57
+K L+ WD+++ G++++ +R+ EG+ + +YM LYT I+N C +
Sbjct: 15 KKYDSLNGTWDFLKTGVSQIFERLDEGM-----TITKYMELYTAIHNYCADASKTITVDN 69
Query: 58 YSQQ--------LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLS 109
++ Q LY+ EEY++ + +S+ + E L K W R+++
Sbjct: 70 FNDQTANVLGEALYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFIN 129
Query: 110 RFFHYLDRYFIA---RRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIF----- 161
F YL+RY++ R + + ++ C I +LL+N+L +F
Sbjct: 130 HLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSW--HHHVFSHIRDSLLQNLLYMFTKKRL 187
Query: 162 --------VEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLK 213
VE+ + + S D + + +Y + +N+I E++ Y ++ E L
Sbjct: 188 YEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFI-ENTKNFYAKESSEYLA 246
Query: 214 KERDRVSHYLHSSSEPKLVEKVQHELLVVYATE-----LLEKEQSGCRALLREDKVEDLS 268
++ YL +E +L E + EL+ +Y E LLE + A E D +
Sbjct: 247 SHS--ITDYL-KKAEIRLAE--EEELVRLYLHESTLKPLLEATEDVLIAQHEEVLHNDFA 301
Query: 269 RMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIE 328
RM L + + + + + T G ++Q + + G + + + +
Sbjct: 302 RM--LDQNCSEDIIRMYRLMSR--TPNGLQPLRQTFEEFVKRSGFAAVAKIVPQVGGEAD 357
Query: 329 LHDK-YMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSS-SELLATFCDNILKKGGNE 386
+ K YME + + + KA KE N A G + ++ L T ++ +
Sbjct: 358 VDPKEYMEMLLSTY-------KASKE----LVNTAFHGDTDFTKSLDTAFRELVNRNVVC 406
Query: 387 KLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAND-DHERSILTKL-- 443
+ S E L K + S+K++ + L+ ++ R D D ++ TKL
Sbjct: 407 QRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLA 466
Query: 444 KQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFW--PSY 501
K+ G TS + + + L++ + EY S Q I LS + T FW P
Sbjct: 467 KRLVNG--TSNSQDAESSM-LSKLKEVCGFEYTSKLQRMFQDISLSQEI-TEAFWQLPQS 522
Query: 502 KSSDLN 507
++ +++
Sbjct: 523 RAGNID 528
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 147/330 (44%), Positives = 203/330 (61%)
Query: 397 LEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKME 456
L+K++ + +I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+E
Sbjct: 2 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 61
Query: 457 GMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCV 516
GM D+ L+++ F++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK
Sbjct: 62 GMFKDMELSKDIMIQFKQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQ 120
Query: 517 EVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 576
E+FK FY K RKL W +LG C + +F++ EL VS +Q LL+FN + S
Sbjct: 121 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLE 180
Query: 577 EIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL 636
EI + +L R L SL+C K ++L K P K I D F N F ++ RIKI
Sbjct: 181 EIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQ 240
Query: 637 ----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDI 692
V+E+ E V +DR+Y IDAA+VRIMK RK L H LVSE QL KP
Sbjct: 241 IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP-- 298
Query: 693 KAIKKRMEDLITRDYLERDKENPNMFRYLA 722
+KKR+E LI RDY+ERDKENPN + Y+A
Sbjct: 299 ADLKKRIESLIDRDYMERDKENPNQYNYIA 328
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 201/630 (31%), Positives = 317/630 (50%)
Query: 126 PALNEVGL--TCFREQIDKERE-GEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQ 182
P L E L C D+ E G D +LL+N +++F +D Y FE ++
Sbjct: 280 PTLQEKILQGACDLVSADRSDENGIVADSSLLRNAIELF-----HSLDVYVSGFEPVLVS 334
Query: 183 DTGAYYSRKASNWILEDSC---PEYMIKAEECLKKERDRVSHY-LHSSSEPKLVEKVQHE 238
+ ++S W +++ Y+ + +++E +R + + +++ KL E +
Sbjct: 335 GSKDFFSL----WAQQEATGYLASYVENSHRLIEREMNRCEQFSFNRTTKQKLSESLDQT 390
Query: 239 LLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV 298
L+ + LL Q LLR L ++Y L + G + + F +I EGT
Sbjct: 391 LVTDQESVLLS--QKDVLGLLRIGNKIALGQLYTLLERRDLGAK-LKGAFSTYIVEEGTG 447
Query: 299 LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYME-YVTNCFINHTLFHKALKEAFEI 357
+V +A V + +K +L D + E + N + H L + E+F
Sbjct: 448 IVFDESEA--------DMVVRLLSFKK--QLDDIWNESFRRNEGLGHAL--RESFESFMN 495
Query: 358 FCNK--AVGGSSS---SELLATFCDNILKKGG---------NEKLSDE--AIEETLEKVV 401
K A GG+ + E++A + D +L+ G N L+DE I L++V+
Sbjct: 496 KGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAENMPLADEDAEINRQLDQVL 555
Query: 402 KLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTD 461
L ++ K +F FY+ LARRLL RSA+DD E+S+L +LK +CG FT +E M D
Sbjct: 556 DLFRFVHGKAVFEAFYKNDLARRLLMGRSASDDAEKSMLARLKTECGSSFTHNLESMFKD 615
Query: 462 LTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKG 521
+ +AR+ +++ Q P +DL V+VL+ WP+Y + +P E+ + F+
Sbjct: 616 MEVARDEMSAYNSIKRERQTPLP-VDLHVSVLSASAWPTYPDVQVRIPPEIATAISDFEK 674
Query: 522 FYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNT---SDRLSYSEI 578
FY+TK RKL W + L C + +F N EL+VS++QA LLLFN L+Y +I
Sbjct: 675 FYDTKYNGRKLAWKHQLAHCQLRARFPNGNKELVVSSFQAIVLLLFNELPEGGTLNYRQI 734
Query: 579 MTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKI---P 635
L+ +L R L SL+CAKY++L K+P + +S +D F +N+ FTD RIKI
Sbjct: 735 QEATTLSDQELTRTLQSLACAKYRVLSKKPKGRDVSPTDEFSYNASFTDPKFRIKINQIQ 794
Query: 636 LPPVDERKKIV-EDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQL-SR-MFKPDI 692
L E K E V DR Y AA+VRIMKSRK + H +LV+E ++ SR + +P
Sbjct: 795 LKETKEENKTTHERVAADRHYETQAAIVRIMKSRKTITHAELVAEVIKATRSRGVLEP-- 852
Query: 693 KAIKKRMEDLITRDYLERDKENPNMFRYLA 722
IKK +E LI +DY+ER E+ N ++Y+A
Sbjct: 853 ADIKKNIEKLIEKDYMER--EDGNRYQYVA 880
Score = 141 (54.7 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 91/406 (22%), Positives = 166/406 (40%)
Query: 9 DQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQ 68
D+ W + ++ + G PE S EE LY N+C Q +++L ++ +Q
Sbjct: 151 DKVWGQLDAALSAI--FSGGKPE--ISLEE---LYKGAENVCRQGRATILAKRLQERCRQ 203
Query: 69 AFEEYISSMVLPSLSEKHDEYMLRELV---KRWANHKVMVRWLSRFFHYLDRYFIAR-RS 124
+ ++ ++ LR +V K W + + VRW+ F+YLD+ F+ +
Sbjct: 204 HVTGKLHGSLVDKAQMAYNIETLRSVVEAWKEWQSMLITVRWI---FYYLDQSFLLHSKE 260
Query: 125 LPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFV-----EIGMGQMDSYEKDFEEH 179
P + E+GL FR+ I + + +L+ D+ E G+ S ++ E
Sbjct: 261 HPVIREMGLQQFRQHIYSD---PTLQEKILQGACDLVSADRSDENGIVADSSLLRNAIE- 316
Query: 180 MLQDTGAYYS---------RKA--SNWILEDSC---PEYMIKAEECLKKERDRVSHYLHS 225
+ Y S K S W +++ Y+ + +++E +R + +
Sbjct: 317 LFHSLDVYVSGFEPVLVSGSKDFFSLWAQQEATGYLASYVENSHRLIEREMNRCEQFSFN 376
Query: 226 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 285
+ + + + + LV +L Q LLR L ++Y L + G + +
Sbjct: 377 RTTKQKLSESLDQTLVTDQESVL-LSQKDVLGLLRIGNKIALGQLYTLLERRDLGAK-LK 434
Query: 286 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 345
F +I EGT +V +A V + +K +L D + E N
Sbjct: 435 GAFSTYIVEEGTGIVFDESEA--------DMVVRLLSFKK--QLDDIWNESFRR---NEG 481
Query: 346 LFHKALKEAFEIFCNK-----AVGGSSS---SELLATFCDNILKKG 383
L H AL+E+FE F NK A GG+ + E++A + D +L+ G
Sbjct: 482 LGH-ALRESFESFMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGG 526
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 663 (238.4 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 179/619 (28%), Positives = 327/619 (52%)
Query: 126 PALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIG--MGQMDSYEKDFEEHMLQD 183
P N++ ++ + I +R G + +L + L+ +V++G +++ Y+ FE+ LQ+
Sbjct: 146 PLKNKLSVSLL-QIIKNDRTGFSTNLQVLSDSLECYVQLGPEKNKLEIYQSCFEQQFLQE 204
Query: 184 TGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVY 243
T +Y +++++I ++ EYM +++E +RV+ Y+ S+ KL + + + L+ Y
Sbjct: 205 TETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPISTLEKLTKILNNVLISNY 264
Query: 244 ATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQA 303
+ K +L EDK DL MY L ++ L P+ N+F I +EG +++
Sbjct: 265 KEQFASKFLD----ILIEDKSSDLVMMYSLLSRV-NHLTPLKNIFSDFIKSEG---LKEI 316
Query: 304 EDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAV 363
E +N + QVLI +++++ ++ + C+ N T F A+ ++F I N+
Sbjct: 317 E---SNL--KEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDFTTAMDKSFSILVNENP 371
Query: 364 GG-------SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAE 415
S+ +L+ FCD IL+KG + +SDEA +E+ L + V L Y+ DKD+F
Sbjct: 372 ASYDPKKKESNIPVVLSKFCDQILRKGPHH-ISDEAELEKKLTEAVCLFKYLPDKDIFML 430
Query: 416 FYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEY 475
Y+K L++RL+ D SA++D E ++ KLK G + +K+ M+TD+ L ++ +F+ +
Sbjct: 431 NYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQNH 490
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP---SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 532
L+ P + VLT G W ++ PSEM+ + F+ FY+ + R L
Sbjct: 491 LNEKSLTLP-YQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSITYFESFYKKSYQGRVL 549
Query: 533 TWIYSLGQCNINGKFEQKNI-ELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 591
T++Y + +++ + + I +L + YQ A LL+FN +D+++ I + L D+
Sbjct: 550 TFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITRFLINDTIGL--DETSI 607
Query: 592 LLHSLSCAKYKIL-LKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLP-PVDERKK----- 644
L L+ K I+ EP+ K + F NSKF+ + ++ + + E K+
Sbjct: 608 RLPLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCNIAVQIGETKQSEGQQ 667
Query: 645 -IVE-DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 702
+ E +++K+R + + AA+VRIMKS+K + H L E Q+S+ F P I AIKK +E L
Sbjct: 668 TVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKWFTPKITAIKKAIEYL 727
Query: 703 ITRDYLERDKE-NPNMFRY 720
I ++Y+ R + NP+ +Y
Sbjct: 728 IDQEYIRRTTDDNPSARKY 746
Score = 53 (23.7 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 35 SSEEYMMLYTTIYNMCT 51
S + YM +YT IYN C+
Sbjct: 30 SRKRYMEIYTKIYNYCS 46
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 665 (239.2 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 159/520 (30%), Positives = 261/520 (50%)
Query: 212 LKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMY 271
LK E R YLH SS K++ + Q ++ + + L E C ++R++K D++ MY
Sbjct: 8 LKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMY 63
Query: 272 RLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHD 331
L + GL + + HI EG +A T + + + ++E+H
Sbjct: 64 VLLRAVSTGLPHMIQELQNHIHDEGL----RATSNLTQEN------MPTLFVESVLEVHG 113
Query: 332 KYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLS 389
K+++ + F AL +A N S + ELLA +CDN+LKK + ++
Sbjct: 114 KFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMT 172
Query: 390 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGG 449
+ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG
Sbjct: 173 ENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGY 232
Query: 450 QFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDL 506
+FTSK+ M TD++++ + F ++ N GI + VL G WP + SS
Sbjct: 233 EFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTF 292
Query: 507 NLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLL 566
+P E+ K V++F+ FY RKLTW++ L + + K +V+TYQ A LL
Sbjct: 293 AIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLA 352
Query: 567 FNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFT 626
FN S+ +SY E+ + +L + + SL K++ + + I F N F+
Sbjct: 353 FNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFS 410
Query: 627 DRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVE 682
+ + KI + + +E VD+DR+ + AA+VRIMK+RKVL H L+ E +
Sbjct: 411 SKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVIS 470
Query: 683 QLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 471 QSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 510
Score = 41 (19.5 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 22 LKRILEGLPESPFSSEEYM--MLYTTIYNMCTQKPPHDYSQQLY 63
++++L L + +Y+ YT + + C Q+ D+ Q L+
Sbjct: 1 MEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLH 44
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 622 (224.0 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 156/548 (28%), Positives = 266/548 (48%)
Query: 139 QIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKASN 194
+I +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++ASN
Sbjct: 166 EIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASN 225
Query: 195 WILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSG 254
+ E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 226 LLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE--- 281
Query: 255 CRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
C ++R++K D++ MY L + GL + + HI EG +A T +
Sbjct: 282 CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNHIHDEGL----RATSNLTQEN--- 334
Query: 315 GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELL 372
+ + ++E+H K+++ + F AL +A N S + ELL
Sbjct: 335 ---MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELL 391
Query: 373 ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSAN 432
A +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S +
Sbjct: 392 AKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMS 450
Query: 433 DDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVT 491
D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI +
Sbjct: 451 MDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIY 510
Query: 492 VLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 511 VLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLG 570
Query: 550 KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPN 609
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL K++ +
Sbjct: 571 KPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSE 628
Query: 610 TKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRK 669
+ I F N F+ + + KI +K V R + ++ I K +
Sbjct: 629 KEDIDAESSFSLNMNFSSKRTKFKI----TTSMQKDTPQVISQSRARFNPSISMIKKCIE 684
Query: 670 VLGHQQLV 677
VL +Q +
Sbjct: 685 VLIDKQYI 692
Score = 70 (29.7 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W+ K +T +K + LE + + ++ ++ IY +C P ++
Sbjct: 6 RVVDFDETWN---KLLTTIKAVVMLEYVERATWNDR-----FSDIYALCVAYP-EPLGER 56
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
LY + K E ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 57 LYTETKIFLENHVRHLHKRVLES--EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIK 114
Query: 122 RRSL 125
+ L
Sbjct: 115 KNKL 118
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 184/612 (30%), Positives = 316/612 (51%)
Query: 14 YMQKGITKLKRILEGLPESPFSSEEYMM--LYTTIYNMCTQKPPHDYSQQLYDKYKQAFE 71
Y + KL+ + + S +S +Y + LY + N+C+ K S LY + +Q E
Sbjct: 43 YTEDTWLKLRDAVSAIQNS--TSIQYNLEELYQAVENLCSYK----VSPMLYKQLRQVCE 96
Query: 72 EYISSMVLPSLSEKHDEY-MLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSL-PALN 129
E++ + + E D L+ + + W +H + F +LDR ++ + SL P++
Sbjct: 97 EHVQAQIHQFREESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIW 156
Query: 130 EVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQ-MDSYEKDFEEHMLQDTGAYY 188
+ GL FR I + + ++ +L+ G+ +D ML D Y
Sbjct: 157 DTGLELFRTHIVSDAA---VQSRTVQGILEQVERERSGETVDRSLLRSLLGMLSDLQVYK 213
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ L ++ Y + + L +ERD V YLH + +L E +++ ++ Y +
Sbjct: 214 DSFEQRF-LSETTRLYAAEGQR-LMQERD-VPEYLHHVAR-RLEE--ENDRVISYLDQST 267
Query: 249 EKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEG--TVLVQQAE 304
+K + LL E L + R + E + +++ +G T L+Q
Sbjct: 268 QKPLIATVEKQLLGEHMTTILQKGLRTLLDENRVCE-LTLLYELFSKVKGGLTALLQSWR 326
Query: 305 DAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVT-NCFINHTLFHKALKEAFEIFCNK 361
+ + G + +++ +++++++ D+ M+ VT +CF + F A+KEAFE F N+
Sbjct: 327 EYIKSVGAETVCSPERDREMVQELLDFKDQ-MDSVTQSCFQRNESFINAMKEAFENFINQ 385
Query: 362 AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
+ +EL+A + D+ L+ GN++ ++E +E L+K++ + +I KD+F FY+K L
Sbjct: 386 RP--NKPAELIAKYVDSKLR-AGNKEATEEELERILDKIMIIFRFIHGKDVFEAFYKKDL 442
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N Q
Sbjct: 443 AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QT 501
Query: 482 AHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQC 541
I+L+V +LT G+WPSY D++LP+EMVK EVFK FY K RKL W +LG
Sbjct: 502 EPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHA 561
Query: 542 NINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 601
+ +F++ EL VS +Q LL+FN SD S EI + +L R L SL+C K
Sbjct: 562 VLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEEGELKRTLQSLACGKA 621
Query: 602 KILLKEPNTKTI 613
++L K P K +
Sbjct: 622 RVLNKTPRGKEV 633
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 417 (151.9 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 128/432 (29%), Positives = 204/432 (47%)
Query: 172 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 231
Y FE L+ + A+Y + + + + +E++R + + SE K+
Sbjct: 230 YLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISLLSESKI 289
Query: 232 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKI-PKGLEPVANVFKQ 290
E V +EL+ E++ E +G R +L D++++LS++Y L ++ PK A V K+
Sbjct: 290 KEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLTAAVQKR 349
Query: 291 ------HITAEGTVLVQ---QAEDAATNQGGSSGAVQE----QVL------IRKIIELHD 331
I L Q Q + T+ G +E QV + I+ L
Sbjct: 350 IVEMGNEINNASFALAQAPAQPKSTGTDAGQKKEKEKEKPVNQVTSSAIKWVDDILALKK 409
Query: 332 KYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDE 391
K+ + F + + A+ +F F N SSE L+ F D LKKG K +D
Sbjct: 410 KFDGIWKDAFGSDQVLQSAITASFSSFLNST---PRSSEFLSLFFDENLKKGVKGK-TDN 465
Query: 392 AIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQF 451
++ LE + LL YI DKD F +Y+K L+RRLL RS + D ER +++K+K + G QF
Sbjct: 466 EVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKMKMEVGNQF 525
Query: 452 TSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPG-IDLSVTVLTTGFWP-----SYKSSD 505
T ++E M D+T++ + S+++++ + +L + VLT+ WP S +
Sbjct: 526 TQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEIMSSSRDGQ 585
Query: 506 LNLPSEMVKCVEV----FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKN-----IELIV 556
+ LP + K VE F+ FY K RKL+W S+G +I F + N EL V
Sbjct: 586 VELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKVQRHELNV 645
Query: 557 STYQAATLLLFN 568
STY LLLFN
Sbjct: 646 STYAMFILLLFN 657
Score = 313 (115.2 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 74/191 (38%), Positives = 113/191 (59%)
Query: 544 NGKFEQKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCA- 599
NGK ++ EL VSTY LLLFN + L++ EI + + +DL+R L SL+ A
Sbjct: 635 NGKVQRH--ELNVSTYAMFILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAP 692
Query: 600 KYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKI--------PLPPVDERKKIVEDVDK 651
K ++L K P ++ + +D F FN+ F +++I + D+RK+ E ++
Sbjct: 693 KTRVLKKVPMSRDVKPTDKFYFNNDFQSPFMKVRIGVVSGGANKVESQDQRKETEEKMNN 752
Query: 652 DRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERD 711
+R +I+AA+VRIMK RK L H L+SE + QLS F PD+ +K+R+E LI R+YLER
Sbjct: 753 ERGGSIEAAIVRIMKQRKTLIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERV 812
Query: 712 KENPNMFRYLA 722
E+P + Y+A
Sbjct: 813 SEDPPTYGYVA 823
Score = 65 (27.9 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 34/184 (18%), Positives = 77/184 (41%)
Query: 88 EYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFREQIDKEREGE 147
E L L + W +H++ ++ ++ Y+DR +A R + ++ + FR+ + +
Sbjct: 118 ERFLSALSEVWEDHQICMKMITDVLMYMDRV-VALRKV-SIYAAAMALFRDHVLRSPVSS 175
Query: 148 QIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIK 207
+ A++ +VL V + M Q++ HM+ + K + E E K
Sbjct: 176 S-NNAVVADVLKSTV-LFMIQLER-----SGHMIDRALIHSCIKMLEGLYETEAEEESSK 228
Query: 208 AE-ECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR---ALLREDK 263
+ + S + + +L+E V + + +E+ C+ +LL E K
Sbjct: 229 LYLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISLLSESK 288
Query: 264 VEDL 267
++++
Sbjct: 289 IKEI 292
Score = 37 (18.1 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 127 ALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGA 186
AL E G+T R DK+R + L + +L ++ M MD+ E+ M + G
Sbjct: 469 ALLENGITLLRYIKDKDRFEAYYKKHLSRRLL---MKRSMS-MDA-ERQMISKMKMEVGN 523
Query: 187 YYSRK 191
++++
Sbjct: 524 QFTQR 528
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 596 (214.9 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 142/469 (30%), Positives = 239/469 (50%)
Query: 137 REQIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQDTGAYYSRKA 192
R+ ++ +R GE ++ ++ V++ FV + + + Y++ FE L +TG YY ++A
Sbjct: 192 RQDLEFDRCGEDPNQKVIHGVINSFVHVEQYKKKLPLKFYQEIFECPFLNETGEYYKQEA 251
Query: 193 SNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQ 252
SN + E +C +YM K LK E R YLH SS K++ + Q ++ + + L E
Sbjct: 252 SNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKVIHECQQRMVADHL-QFLHAE- 309
Query: 253 SGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGG 312
C ++R++K D++ MY L + GL + + HI EG A +N
Sbjct: 310 --CHNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNHIHDEGL-------RATSNLSQ 360
Query: 313 SSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSE 370
+ Q + ++E+H K+++ + F AL +A N S + E
Sbjct: 361 ENMPTQ---FVESVLEVHSKFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSICKAPE 417
Query: 371 LLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 430
LLA +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S
Sbjct: 418 LLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLS 476
Query: 431 ANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLS 489
+ D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N GI
Sbjct: 477 MSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTIIDLGISFQ 536
Query: 490 VTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF 547
+ VL G WP + SS +P E+ K V++F+ FY RKLTW++ L + +
Sbjct: 537 IYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNY 596
Query: 548 EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 596
K +V+TYQ A LL FN S+ +SY E+ + +L + + SL
Sbjct: 597 LCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL 645
Score = 60 (26.2 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 24/124 (19%), Positives = 54/124 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRI--LEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
+ +D D+ W+ K +T +K + L+ + + ++ ++ IY +C P ++
Sbjct: 6 RVVDFDETWN---KLLTTIKAVVMLDYVERATWNDR-----FSDIYALCVAYP-EPVRRE 56
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
Y + K FE ++ + L +E +L + W + ++ + YL+ FI
Sbjct: 57 PYTETK-IFENHVHHLHKRVLES--EEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIK 113
Query: 122 RRSL 125
+ L
Sbjct: 114 KNKL 117
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 128/252 (50%), Positives = 170/252 (67%)
Query: 6 IDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDK 65
I + W +Q+G TKL R++EG E F+ E MM++T Y +C K P QQLYDK
Sbjct: 7 IKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNP----QQLYDK 62
Query: 66 YKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSL 125
Y++ E Y VLPSL EKHDE MLREL KRW HK++VR SR YLD F++++ L
Sbjct: 63 YRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKGL 122
Query: 126 PALNEVGLTCFREQ----------------IDKEREGEQIDRALLKNVLDIFVEIGMGQM 169
P+L EVGL CFR+Q I KEREGEQIDR L++NV+D+FVE GMG +
Sbjct: 123 PSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVENGMGTL 182
Query: 170 DSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEP 229
YE+DFE MLQDT +YYS KAS WI E+SC +Y +K ++CL++ER+RV+HYLH ++EP
Sbjct: 183 KKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYLHPTTEP 242
Query: 230 KLVEKVQHELLV 241
KL E V++ +++
Sbjct: 243 KLFE-VRYGIII 253
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 206/757 (27%), Positives = 356/757 (47%)
Query: 6 IDLDQGWDYMQKGITKLKRILEGLPESPFS---SEEYMMLYTTIYNMCTQKPPHDYSQQL 62
+ ++ W +Q G+ L R E + + + Y + TT P S+ L
Sbjct: 1 MSIEAVWGTLQDGLNLLYR-REHMSKKYYMMLYDAVYNICTTTTLANSNNNSPEFASEFL 59
Query: 63 YDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIAR 122
Y + + Y+ + + +S + +L + W N K R + F YL+R F+++
Sbjct: 60 YKQLENYIRTYVIA-IRDRISACSGDELLGKCTIEWDNFKFSTRICNCIFQYLNRNFVSK 118
Query: 123 R------SLPALNEVGLTCFREQIDKEREGEQIDRALLKNVL-------------DIFVE 163
+ + + ++ L ++ + + + ID A+L+ +L VE
Sbjct: 119 KVEDKNGEIVEIYKLALDIWKAEFFDNFKVKTID-AILELILLERCGSTINSTHISSVVE 177
Query: 164 IGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYL 223
+ ++D Y+ FE L T +Y ++ N +++ EYMI E L +E R YL
Sbjct: 178 C-LTELDIYKVSFEPQFLDATKLFYKQEVLN--SKETVIEYMITVENRLFQEEYRSRRYL 234
Query: 224 HSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEP 283
S+ L++ + +L+ + L E LL K E L+RMY L ++ GLE
Sbjct: 235 GPSTNDLLIDSCE-SILISDRLKFLHSE---FERLLEARKDEHLTRMYSLCRRVTHGLED 290
Query: 284 VANVFKQHITAEGTVLVQQ-AEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFI 342
+ ++ I EG +Q+ A+D+ G +E I K++E+H+ Y + F
Sbjct: 291 LRVYLEKRILKEGHETLQRLAKDS-----GLKTTPKEY--ITKLLEVHEIYFNLINKAFD 343
Query: 343 NHTLFHKALKEAFEIFCN-KAVG--------GSSSSELLATFCDNILKKGGNEKLSDEAI 393
+ LF ++L +A + F AV + S++ LA +CD +LKK N K+ DE
Sbjct: 344 RNALFMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKK--NSKVQDET- 400
Query: 394 EETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTS 453
L+K + +L YIS+KD+F +Y+ + R++ + SA+DD E +T L G ++T
Sbjct: 401 --ALDKALTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTR 458
Query: 454 KMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMV 513
+ MV D ++++ T F++ + ID +V + TTG WPS + LP E+
Sbjct: 459 NLVKMVEDAKISKDLTTEFKDIKTEKS-----IDFNVILQTTGAWPSLDQIKIILPRELS 513
Query: 514 KCVEVFKGFYETKTKHRKLTWIYSLGQCNINGK-FEQKNIELIVSTYQAATLLLFNTSDR 572
++ F FY R+L W YS + +N K FE+K + IV+ Q TL LFN D
Sbjct: 514 TILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYV-FIVTASQLCTLYLFNEQDS 572
Query: 573 LSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP-NTKTISQSDHF-EFNSKFTDRMR 630
+ +I + +T ++ SL+ +L+ + N K D N+K+ ++
Sbjct: 573 FTIEQISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKV 632
Query: 631 RIK----IPLPPVDERKKIVED-VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLS 685
R+ I D V++ V+ DR+Y I A +VRIMK+RK L H L++E + QL
Sbjct: 633 RVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLK 692
Query: 686 RMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
F P+++ IK +E LI + Y+ R + N++ YLA
Sbjct: 693 SRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 180/653 (27%), Positives = 319/653 (48%)
Query: 98 WANHKVMVRWLSRFFHYLDRYFIARR-SLPALNEVGLTCFREQIDKEREGEQIDRALLKN 156
W V + F+Y+D+ F++ P + E+ L+ FRE++ + I L +
Sbjct: 111 WNKWLERVEIVQNIFYYMDKTFLSHHPDYPTIEELSLSLFREKLMAVKN---IQIPFLNS 167
Query: 157 VLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKER 216
+L F + K + LQD R + P Y++
Sbjct: 168 LLQSFENLHSS------KSTDHAYLQDAMLMLHR--TEMYSSVFVPMYLVM--------- 210
Query: 217 DRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRA--LLREDKV--EDLSRMYR 272
+S + + S K+ E E L YA LE+E + ++R+ K E + R
Sbjct: 211 --LSRFYDTESSQKIQELPLEEYLE-YAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLI 267
Query: 273 LYH--KIPKGLEPVANVFKQH----------ITAEGTVLVQQAEDAATNQGGS--SGAVQ 318
H + KG+ H E L+Q D + G + +
Sbjct: 268 TSHLDTLTKGISQFIEKRDAHSCKLLYALLQFNHETEYLIQPWSDCLVDVGFKLVNDESK 327
Query: 319 EQVLIRKIIELHDKYMEYVTN-CFINHTLFHKALKEAFEIFCNKAVGGS--SSSELLATF 375
+ L+++++ H K+++ V + F++ A+++AFE F N A G + + L+A +
Sbjct: 328 DDTLVQELLSFH-KFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKY 386
Query: 376 CDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDH 435
D +L+ G + + ++E +++ L YI+ KD+F +Y+ +A+RLL ++SA+ +
Sbjct: 387 IDYLLRVG-EQASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQN 445
Query: 436 ERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTT 495
E +L LK+ CG QFT +EGM D+ +++E +SF + + N H DL V VL+
Sbjct: 446 ELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFRHSKAAH-NLHR--DLYVNVLSQ 502
Query: 496 GFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELI 555
+WPSY S + LP +M + ++ F+ FY +K +K++W SLG C + +F N EL
Sbjct: 503 AYWPSYPESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELS 562
Query: 556 VSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKT 612
+S +QA LL FN + +SY ++ L+ DL R L SLSCA+ + L+ P +K
Sbjct: 563 ISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKK 622
Query: 613 ISQSDHFEFNSKFTDRMRRIKI-PLPPVDERKK---IVEDVDKDRRYAIDAALVRIMKSR 668
S F N KFTD++ R+KI + +ER++ + E V +DR++ + A++VR+MK +
Sbjct: 623 PSPDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQK 682
Query: 669 KVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYL 721
+ + H LV + + P + +K +E L+ ++YLER E+ +++ Y+
Sbjct: 683 EKMKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLER--EDNDIYTYV 733
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 419 (152.6 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 102/334 (30%), Positives = 174/334 (52%)
Query: 172 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 231
Y++ FE+ +L DT YYS A + + SC EYM + L++E R YLH SS K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 232 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 291
+ Q ++ + +L + C L+ ++ +DL MYRL I GL + F+++
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 292 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 351
+ +G +A + G + V +Q + ++ +++K+ + T F++ F L
Sbjct: 411 VKKKGL-------EAVSRLTGEN--VPQQ-FVENVLRVYNKFNDMKTAVFMDDGEFSSGL 460
Query: 352 KEAFEIFCNKAVGGSS---SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYIS 408
+A + N G S +SE LA + D +LKK + LS+ +E L+ + + YI
Sbjct: 461 DKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIE 519
Query: 409 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 468
DKD+F +FY K LA RL+ S + D E ++ KLKQ CG +FTSK+ M TD+ L++E
Sbjct: 520 DKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQEL 579
Query: 469 QTSFEEYLSNNQNAHPGIDLSVT---VLTTGFWP 499
+F++++++ + P + T +L G WP
Sbjct: 580 SNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWP 613
Score = 288 (106.4 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 64/224 (28%), Positives = 120/224 (53%)
Query: 504 SDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAAT 563
++ +LP + ++ F+ FY K RKLTW++++ Q ++ + K + YQ A
Sbjct: 632 ANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAA 691
Query: 564 LLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNS 623
LL F D + +I ++ ++ D L++ + ++ + L + + ++ N
Sbjct: 692 LLCFERRDAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNM 747
Query: 624 KFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVS 678
T + + ++ P V+ E++ + V +DR+Y ++ A+VRIMK+RKVL H LV+
Sbjct: 748 SMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVT 807
Query: 679 ECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
E ++Q F PD+ IKK +EDLI + Y++R +N ++YLA
Sbjct: 808 EIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 850
Score = 106 (42.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 46/241 (19%), Positives = 106/241 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLY 63
K ++ D+ W ++ I + + P ++ ++ ++ +Y++C P S++LY
Sbjct: 83 KVVEFDKVWVQLRPSIIDIINL------RPITNVQWHHKFSDVYDICVSIPT-PLSERLY 135
Query: 64 DKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW-ANHKVMVRWLSRFFHYLDRYFIAR 122
++ K +E++ + + + +L+E K W H+ + ++ R F YL++ F+ +
Sbjct: 136 NEVKACIQEHVRQK-RQDIVDVDPDLLLQEYHKMWRVFHEGAI-FIHRLFGYLNKQFVKQ 193
Query: 123 RSLPAL-NEVGLTCFREQIDKEREG----EQIDRALLKNVLDIFVEIGMGQMDSYEKDFE 177
+ L N F + D + G E L+K +L V++ + +D+ K
Sbjct: 194 KRCTDLDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIAIDNDRKGNF 253
Query: 178 EHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE-PKLVEKVQ 236
H+ + S ++++ + ++ AE K R+ + + S E P L + Q
Sbjct: 254 PHIANEV----SGVINSFVKMEETDFDVVPAEGARYKARESTTAFYQESFEKPLLTDTEQ 309
Query: 237 H 237
+
Sbjct: 310 Y 310
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 419 (152.6 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 102/334 (30%), Positives = 174/334 (52%)
Query: 172 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 231
Y++ FE+ +L DT YYS A + + SC EYM + L++E R YLH SS K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 232 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 291
+ Q ++ + +L + C L+ ++ +DL MYRL I GL + F+++
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 292 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 351
+ +G +A + G + V +Q + ++ +++K+ + T F++ F L
Sbjct: 411 VKKKGL-------EAVSRLTGEN--VPQQ-FVENVLRVYNKFNDMKTAVFMDDGEFSSGL 460
Query: 352 KEAFEIFCNKAVGGSS---SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYIS 408
+A + N G S +SE LA + D +LKK + LS+ +E L+ + + YI
Sbjct: 461 DKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIE 519
Query: 409 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 468
DKD+F +FY K LA RL+ S + D E ++ KLKQ CG +FTSK+ M TD+ L++E
Sbjct: 520 DKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQEL 579
Query: 469 QTSFEEYLSNNQNAHPGIDLSVT---VLTTGFWP 499
+F++++++ + P + T +L G WP
Sbjct: 580 SNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWP 613
Score = 288 (106.4 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 64/224 (28%), Positives = 120/224 (53%)
Query: 504 SDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAAT 563
++ +LP + ++ F+ FY K RKLTW++++ Q ++ + K + YQ A
Sbjct: 632 ANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAA 691
Query: 564 LLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNS 623
LL F D + +I ++ ++ D L++ + ++ + L + + ++ N
Sbjct: 692 LLCFERRDAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNM 747
Query: 624 KFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVS 678
T + + ++ P V+ E++ + V +DR+Y ++ A+VRIMK+RKVL H LV+
Sbjct: 748 SMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVT 807
Query: 679 ECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
E ++Q F PD+ IKK +EDLI + Y++R +N ++YLA
Sbjct: 808 EIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 850
Score = 106 (42.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 46/241 (19%), Positives = 106/241 (43%)
Query: 4 KTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLY 63
K ++ D+ W ++ I + + P ++ ++ ++ +Y++C P S++LY
Sbjct: 83 KVVEFDKVWVQLRPSIIDIINL------RPITNVQWHHKFSDVYDICVSIPT-PLSERLY 135
Query: 64 DKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW-ANHKVMVRWLSRFFHYLDRYFIAR 122
++ K +E++ + + + +L+E K W H+ + ++ R F YL++ F+ +
Sbjct: 136 NEVKACIQEHVRQK-RQDIVDVDPDLLLQEYHKMWRVFHEGAI-FIHRLFGYLNKQFVKQ 193
Query: 123 RSLPAL-NEVGLTCFREQIDKEREG----EQIDRALLKNVLDIFVEIGMGQMDSYEKDFE 177
+ L N F + D + G E L+K +L V++ + +D+ K
Sbjct: 194 KRCTDLDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIAIDNDRKGNF 253
Query: 178 EHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE-PKLVEKVQ 236
H+ + S ++++ + ++ AE K R+ + + S E P L + Q
Sbjct: 254 PHIANEV----SGVINSFVKMEETDFDVVPAEGARYKARESTTAFYQESFEKPLLTDTEQ 309
Query: 237 H 237
+
Sbjct: 310 Y 310
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 191/721 (26%), Positives = 354/721 (49%)
Query: 42 LYTTIYNMCTQ---KPPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
L++ + ++C + K +D + ++ ++ +E ++++ L+E + E L + + W
Sbjct: 145 LFSKVRSVCDKNQSKVLYDRLVAIVVQFAKSLKESLNAVEQVPLAEDNCEQYLEKFGQIW 204
Query: 99 ANHKVMVRWLSRFFHYLDRYFIARRS---LPALNEVGLTCFRE----QIDKEREGEQIDR 151
+ V + + F +LDR + LP L E + F++ I KE + ++
Sbjct: 205 QAYPVKINLIRNIFLHLDRIALGATDTEILP-LWECFMQIFQKTFFPNIFKEFKATKLFN 263
Query: 152 AL---LKNVLDIF-VE------IGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSC 201
AL ++ ++ + V+ + M Q ++F + ++ +Y+ + + + + +C
Sbjct: 264 ALYMAMQKIMQRYPVDSPLRSLVDMLQTVHVSEEFAKFLISQLREHYNNERIDKVPKMNC 323
Query: 202 PEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYAT-ELLEKEQSGCRALLR 260
+YM E+ + + V S K V+ L+ A E+L + L+
Sbjct: 324 NDYMEYCEDQINRYSQLVKVNFDEPSALKDVQATVTNCLIQQAIPEILTHDFDD---LID 380
Query: 261 EDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQ 320
D + D+ RM+ L + G + V F +++ G L+ D V E
Sbjct: 381 SDNISDIGRMFNLCRQCVGGEDEVRTQFSKYLKKRGEKLIATCPD--------EDLVSEL 432
Query: 321 VLIRKIIELHDKYMEYVTNCF--INHTL-FHKALKEAFEIFCNKAVGGSSSSELLATFCD 377
+ +K ++ +T F N + + L +AFE F NK V S+EL++
Sbjct: 433 LAFKKKVDF------IMTGSFKSANDPVKMRQCLSDAFESFVNKQV--DRSAELISKHFH 484
Query: 378 NILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHE 436
+L N+ +SD+ +++ +++ + L Y+ KD+F +Y++ LA+RL +RSA+ D E
Sbjct: 485 TLLHSS-NKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAE 543
Query: 437 RSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTG 496
+ +L KLK +CG FT K+EGM D+ + F +YL + N + + V+T
Sbjct: 544 KMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEH-MNKEKA-NFTARVITPE 601
Query: 497 FWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQK-NIELI 555
+WP+Y + ++N+P EM + ++ FY + +R + W + L I+ F ELI
Sbjct: 602 YWPTYDTYEINIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELI 661
Query: 556 VSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCA--KYKILLK------E 607
+ YQ LLLFN + + +EI+ + ++V+ + +L K K+L + E
Sbjct: 662 ATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSE 721
Query: 608 PNTKTIS--QSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAAL 661
T+ +++ F NSKFT++ R++I V+E K++ E+V+ DR+Y IDAA+
Sbjct: 722 KKEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAV 781
Query: 662 VRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYL 721
VRIMK+RK L HQ L++E ++QL F IKKR+E LI R+Y+ RD E + + Y+
Sbjct: 782 VRIMKARKQLNHQTLMTELLQQLR--FPVSTADIKKRLESLIEREYISRDPEEASSYNYV 839
Query: 722 A 722
A
Sbjct: 840 A 840
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 533 (192.7 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 162/628 (25%), Positives = 308/628 (49%)
Query: 105 VRWLSRFFHYLDRYFIARRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEI 164
V LS F + D F L L E LTC ++Q D + + +K+++ + ++I
Sbjct: 146 VNTLS-FIKWKDEMFKPNSKL--LIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDI 202
Query: 165 G---MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSH 221
+ Y FE L+ T YY+++++ ++ + +YM K E + +E R ++
Sbjct: 203 QDLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNN 262
Query: 222 YLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGL 281
YL ++ L+E + L+ +A E+ ++ LL +++++ + RMY+L ++ K L
Sbjct: 263 YLEERTKKPLLEVLNAALIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTL 318
Query: 282 EPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCF 341
+P+AN + +I E +++ + A N V+ +V + +I +++++ + V F
Sbjct: 319 DPLANTLELYIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAF 378
Query: 342 INHTLFHKALKEAFEIFCN-------KAVGGSSSSELLATFCDNILKKGGNEKLSDEAIE 394
T F K+L A F N K + ELLA + D LK N K +E
Sbjct: 379 SKDTKFIKSLDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKS--NSK-DNEMNA 435
Query: 395 ETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSK 454
+ L V K +I+++D F E YR+ LA+RL+ S +++ E S++ +L+++ ++TSK
Sbjct: 436 DNLMIVFK---FIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSK 492
Query: 455 MEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLN---LPSE 511
M M TD+ + + + F++ N D S VL WP + S D N L E
Sbjct: 493 MTKMFTDIKASDDLKIKFKD----GMNVL--FDFSPMVLARSTWPFHSSQDYNDLKLAPE 546
Query: 512 MVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ----KNIELIVSTYQAATLLLF 567
+ ++ FK Y + K +++ W+++ G+ + + K IVS Q LL +
Sbjct: 547 LKVTIDSFKAMYLQQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAY 606
Query: 568 NTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTD 627
N S + +++ + + + L H KYK+L +E + I DH+ SK +
Sbjct: 607 NYSKTYTLDDLVKIVGIKKELLQN--HVTPFVKYKLLKEEGDQLVIV--DHYP--SK-KN 659
Query: 628 RMRRI-KIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSR 686
++ I I ++ ++I ++V + R ++A++VRIMKS+K + L++E V Q
Sbjct: 660 KVSFIGAITKTKEEDVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGN 719
Query: 687 MFKPDIKAIKKRMEDLITRDYLERDKEN 714
F +K+ ++ LI ++YL+R+ ++
Sbjct: 720 RFNAKNIDVKRAIDSLIDKEYLKRNGDD 747
Score = 112 (44.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 7 DLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKP-----P------ 55
DL+ W ++Q G L+ IL E ++ YM YT +YN C K P
Sbjct: 10 DLNATWTFIQPG---LEYILGAHGEQGVTATVYMNCYTAVYNYCVNKSRRGTTPVSISNN 66
Query: 56 ---HDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFF 112
+ YS + YK+ EEY++ + +L +E L V++W + +++ F
Sbjct: 67 SDNNSYSLAGAEIYKK-LEEYLTEFI-KNLKRLPNESFLEFYVRKWTRFTIGAVYMNNVF 124
Query: 113 HYLDRYFIAR 122
Y++RY++ +
Sbjct: 125 DYMNRYWVQK 134
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 533 (192.7 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 162/628 (25%), Positives = 308/628 (49%)
Query: 105 VRWLSRFFHYLDRYFIARRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEI 164
V LS F + D F L L E LTC ++Q D + + +K+++ + ++I
Sbjct: 146 VNTLS-FIKWKDEMFKPNSKL--LIEQILTCIQQQRDNMIVDTNLISSAIKSLVFLSIDI 202
Query: 165 G---MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSH 221
+ Y FE L+ T YY+++++ ++ + +YM K E + +E R ++
Sbjct: 203 QDLKKPNLIIYVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNN 262
Query: 222 YLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGL 281
YL ++ L+E + L+ +A E+ ++ LL +++++ + RMY+L ++ K L
Sbjct: 263 YLEERTKKPLLEVLNAALIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTL 318
Query: 282 EPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCF 341
+P+AN + +I E +++ + A N V+ +V + +I +++++ + V F
Sbjct: 319 DPLANTLELYIKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAF 378
Query: 342 INHTLFHKALKEAFEIFCN-------KAVGGSSSSELLATFCDNILKKGGNEKLSDEAIE 394
T F K+L A F N K + ELLA + D LK N K +E
Sbjct: 379 SKDTKFIKSLDNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKS--NSK-DNEMNA 435
Query: 395 ETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSK 454
+ L V K +I+++D F E YR+ LA+RL+ S +++ E S++ +L+++ ++TSK
Sbjct: 436 DNLMIVFK---FIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSK 492
Query: 455 MEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLN---LPSE 511
M M TD+ + + + F++ N D S VL WP + S D N L E
Sbjct: 493 MTKMFTDIKASDDLKIKFKD----GMNVL--FDFSPMVLARSTWPFHSSQDYNDLKLAPE 546
Query: 512 MVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ----KNIELIVSTYQAATLLLF 567
+ ++ FK Y + K +++ W+++ G+ + + K IVS Q LL +
Sbjct: 547 LKVTIDSFKAMYLQQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAY 606
Query: 568 NTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTD 627
N S + +++ + + + L H KYK+L +E + I DH+ SK +
Sbjct: 607 NYSKTYTLDDLVKIVGIKKELLQN--HVTPFVKYKLLKEEGDQLVIV--DHYP--SK-KN 659
Query: 628 RMRRI-KIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSR 686
++ I I ++ ++I ++V + R ++A++VRIMKS+K + L++E V Q
Sbjct: 660 KVSFIGAITKTKEEDVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGN 719
Query: 687 MFKPDIKAIKKRMEDLITRDYLERDKEN 714
F +K+ ++ LI ++YL+R+ ++
Sbjct: 720 RFNAKNIDVKRAIDSLIDKEYLKRNGDD 747
Score = 112 (44.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 34/130 (26%), Positives = 60/130 (46%)
Query: 7 DLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKP-----P------ 55
DL+ W ++Q G L+ IL E ++ YM YT +YN C K P
Sbjct: 10 DLNATWTFIQPG---LEYILGAHGEQGVTATVYMNCYTAVYNYCVNKSRRGTTPVSISNN 66
Query: 56 ---HDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFF 112
+ YS + YK+ EEY++ + +L +E L V++W + +++ F
Sbjct: 67 SDNNSYSLAGAEIYKK-LEEYLTEFI-KNLKRLPNESFLEFYVRKWTRFTIGAVYMNNVF 124
Query: 113 HYLDRYFIAR 122
Y++RY++ +
Sbjct: 125 DYMNRYWVQK 134
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 155/559 (27%), Positives = 268/559 (47%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQD 183
L + + +I +R GE ++ ++ V++ FV + + + Y+ F L +
Sbjct: 155 LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQGIFVSPFLTE 214
Query: 184 TGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVY 243
TG YY ++ASN + E +C +YM K LK E R YLH SS K++ + Q ++ +
Sbjct: 215 TGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADH 274
Query: 244 ATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQA 303
+ L E C +++R ++ D++ MY L + GL + ++HI EG +A
Sbjct: 275 L-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHDEGL----RA 326
Query: 304 EDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAV 363
T + + + ++E+H K+++ + F AL +A N
Sbjct: 327 TSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALTSVVNYRE 380
Query: 364 GGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKL 421
S + ELLA +CDN+LKK + +++ +E+ L + + YI DKD+F +FY + L
Sbjct: 381 PKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARML 439
Query: 422 ARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 481
A+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ + F ++ N
Sbjct: 440 AKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDT 499
Query: 482 AHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL 538
GI + VL G WP + SS +P E+ K V++F+ FY RKLTW++ L
Sbjct: 500 VIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYL 559
Query: 539 GQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSC 598
+ + K +V+TYQ A LL FN S+ +SY E+ + +L + + SL
Sbjct: 560 CTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL-- 617
Query: 599 AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAID 658
K++ + + I F N F+ + + KI +K V R +
Sbjct: 618 LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKI----TTSMQKDTPQVISQSRARFN 673
Query: 659 AALVRIMKSRKVLGHQQLV 677
++ I K +VL +Q +
Sbjct: 674 PSISMIKKCIEVLIDKQYI 692
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 346 (126.9 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 97/347 (27%), Positives = 172/347 (49%)
Query: 176 FEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKV 235
FE H+L+ + +Y +A + ++ + L +E DR L + S K+ V
Sbjct: 231 FEPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAV 290
Query: 236 QHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKI-P------KG-LEPV--- 284
+ EL+ + + L E +G R +L +D+VEDL+ +Y+L ++ P KG L +
Sbjct: 291 EAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDLLKKGVLNRILAL 350
Query: 285 -ANVFKQHIT-----AEGTVLVQQAEDAATNQGGSSGAVQEQVLIR---KIIELHDKYME 335
A + K T A+G A + +Q S A Q I+ +++L K+
Sbjct: 351 GAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIKWVHDVLDLRAKFDV 410
Query: 336 YVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEE 395
F + + F F ++ SSE ++ + D LK+G K SD +
Sbjct: 411 IWEKSFAQDPGLQTTMTKGFSDFIHQF---GRSSEFVSLYIDENLKRGIRGK-SDLEVTA 466
Query: 396 TLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKM 455
L++ + ++ Y+ DKDLF +Y+K L RRLL R+++++ E+ ++T ++ + G FTSK
Sbjct: 467 ILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLELGKHFTSKF 526
Query: 456 EGMVTDLTLARENQTSFEEYLSNNQNA---HPGIDLSVTVLTTGFWP 499
EGM D+T++ E T + E++ + + H IDL+++VLT+ WP
Sbjct: 527 EGMFKDITISEELSTKYGEHIRSLGDVDVHHKPIDLAISVLTSNSWP 573
Score = 329 (120.9 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 80/185 (43%), Positives = 114/185 (61%)
Query: 549 QKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSC-AKYKIL 604
++ EL VSTY L+LFN+ + LS+ +I + ++ DL R L SLS K ++L
Sbjct: 648 ERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVL 707
Query: 605 LKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPV--DERKKIVEDV-DKDRRYAI 657
LK+P TKTI D F FN+ F + +IK P+ V DE ++ ED D+ RR+ I
Sbjct: 708 LKDPATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVEGDEERQRTEDKNDETRRHMI 767
Query: 658 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 717
DAA+VRIMKSRK L H L++E + QL F+PD+ IK R+EDLI R+YLER ++
Sbjct: 768 DAAIVRIMKSRKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLERLDDSG-- 825
Query: 718 FRYLA 722
++Y+A
Sbjct: 826 YKYMA 830
Score = 236 (88.1 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 103/420 (24%), Positives = 171/420 (40%)
Query: 267 LSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKI 326
L+R+ L +I K L + Q AE + A + Q + A + V +
Sbjct: 344 LNRILALGAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIKWV--HDV 401
Query: 327 IELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKG--G 384
++L K+ F + + F F ++ SSE ++ + D LK+G G
Sbjct: 402 LDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQF---GRSSEFVSLYIDENLKRGIRG 458
Query: 385 NEKLSDEAIEETLEKVVKLLAYISD--KDLFAEFYRKKLARRLLFDRSANDDHERSILTK 442
L AI + +++ L D + + + ++L A + +
Sbjct: 459 KSDLEVTAILDRSIVMIRYLKD-KDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLE 517
Query: 443 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP--- 499
L + +F + + L+ + L + H IDL+++VLT+ WP
Sbjct: 518 LGKHFTSKFEGMFKDITISEELSTKYGEHIRS-LGDVDVHHKPIDLAISVLTSNSWPPDV 576
Query: 500 -----------SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF- 547
+ D N P E+ + + F FY R LTWI S G +I F
Sbjct: 577 MGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKCVFP 636
Query: 548 ----------EQKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLH 594
++ EL VSTY L+LFN+ + LS+ +I + ++ DL R L
Sbjct: 637 PVKGMSGPLSRERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALA 696
Query: 595 SLSC-AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDR 653
SLS K ++LLK+P TKTI D F FN+ F + IKI P ++ + K+ D ++ R
Sbjct: 697 SLSINPKARVLLKDPATKTIRPGDKFSFNAGFVSKA--IKIKAPVINSQSKVEGDEERQR 754
Score = 166 (63.5 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 75/359 (20%), Positives = 157/359 (43%)
Query: 127 ALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMG--QMDS---YEKDFEEHML 181
+L ++ T + ID EREG+ I+R+L+ + + + ++ +MD+ Y FE H+L
Sbjct: 177 SLFDILSTVILDHIDMEREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRFEPHLL 236
Query: 182 QDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLV 241
+ + +Y +A + ++ + L +E DR L + S K+ V+ EL+
Sbjct: 237 EASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAVEAELIS 296
Query: 242 VYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQ 301
+ + L E +G R +L +D+VEDL+ +Y+L ++ + + I A G + +
Sbjct: 297 AHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDLLKKGVLNRILALGAEIEK 356
Query: 302 QAE--DAATNQGGSS-GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIF 358
D + QG ++ E+ + + + + + +++ L L+ F++
Sbjct: 357 NLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIK--WVHDVL---DLRAKFDVI 411
Query: 359 CNKAVGGSSSSELLAT--FCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
K+ + T F D I + G + + I+E L++ ++ SD ++ A
Sbjct: 412 WEKSFAQDPGLQTTMTKGFSDFIHQFGRSSEFVSLYIDENLKRGIRGK---SDLEVTAIL 468
Query: 417 YRKKLARRLLFDRSANDDHERSILTK--LKQQCGGQFTSKMEGMVTDLTLARENQTSFE 473
R + R L D+ + + + L + L + + K + L L + + FE
Sbjct: 469 DRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLELGKHFTSKFE 527
Score = 71 (30.1 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 48/280 (17%), Positives = 114/280 (40%)
Query: 4 KTIDLDQGWDYMQKGITKL--KRILEGLPESPFSSEEYMMLYTT---IYNMCTQKPPHDY 58
+T + DQ WD +++ +T + + L E + + ++L +Y + + +
Sbjct: 17 ETDEFDQQWDVLREALTDIHNRNSSRLLFEHLYRASYKIVLKKQGERLYTLVQEFEGKWF 76
Query: 59 SQQLYDKYKQAFEEYISSMVLPSLSEKHD-----EYMLRELVKRWANHKVMVRWLSRFFH 113
++Q+ + + + ++ + + + H+ + ++ L + W NH++ + ++
Sbjct: 77 AEQVIPQLQAMIAPNLINVAVEAGTSAHERREMGDTFMKGLKEAWENHRMSMNMVADILM 136
Query: 114 YLDRYFI--ARRSLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMD- 170
YLD+ F+ +R + + +GL FR+ + DR ++ DI + + +D
Sbjct: 137 YLDKGFLKESRGTSIFVTTIGL--FRDHLVNPNTVVGHDRTF--SLFDILSTVILDHIDM 192
Query: 171 SYEKDFEEHMLQDTGAYYSRKASNWILE-DSCPEYMIKAEECLKKERDRVSHYLHSSSEP 229
E D L + E D+ Y+++ E L + S + S
Sbjct: 193 EREGDVINRSLIHSCVKMLEDLYETDEEMDADRLYLVRFEPHLLE----ASRTFYRSEAL 248
Query: 230 KLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSR 269
KL+ + + L +E+ C+ L +E ++R
Sbjct: 249 KLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTR 288
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 567 (204.7 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 132/410 (32%), Positives = 215/410 (52%)
Query: 329 LHDKYMEYVTNCFINH--TLFHKALKEA---FEIFCNKAVGGS----SSSELLATFCDNI 379
+HD+ + +N H TLF +++ E F N + G S+ + LA +CDN+
Sbjct: 319 IHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKLAKYCDNL 378
Query: 380 LKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSI 439
LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E ++
Sbjct: 379 LKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAM 437
Query: 440 LTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVTVLTTGFW 498
+ KLKQ CG +FTSK+ M TD++++ + F ++ N GI + VL G W
Sbjct: 438 INKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLGISFQIYVLQAGAW 497
Query: 499 PSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIV 556
P + SS +P E+ K V++F+ FY RKLTW++ L + + K +V
Sbjct: 498 PLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMV 557
Query: 557 STYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQS 616
+TYQ A LL FN S+ +SY E+ + +L + + SL K++ + + I
Sbjct: 558 TTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAE 615
Query: 617 DHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIMKSRKVLG 672
F N F+ + + KI + + +E VD+DR+ + AA+VRIMK+RKVL
Sbjct: 616 SSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLR 675
Query: 673 HQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 676 HNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 725
Score = 210 (79.0 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 60/252 (23%), Positives = 117/252 (46%)
Query: 128 LNEVGLTCFREQIDKEREGEQIDRALLKNVLDIFVEIGMGQ----MDSYEKDFEEHMLQD 183
L + + +I +R GE ++ ++ V++ FV + + + Y+ F L +
Sbjct: 155 LQNILIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQGIFVSPFLTE 214
Query: 184 TGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVY 243
TG YY ++ASN + E +C +YM K LK E R YLH SS K++ + Q ++ +
Sbjct: 215 TGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADH 274
Query: 244 ATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQA 303
+ L E C +++R ++ D++ MY L + GL + ++HI EG +A
Sbjct: 275 L-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRHIHDEGL----RA 326
Query: 304 EDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN--- 360
T + + + ++E+H K+++ + F AL + + +C+
Sbjct: 327 TSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKLAK-YCDNLL 379
Query: 361 -KAVGGSSSSEL 371
K+ G + +E+
Sbjct: 380 KKSAKGMTENEV 391
Score = 42 (19.8 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 22 LKRILEGLPESPFSSEEYM--MLYTTIYNMCTQKPPHDYSQQLYDK 65
++++L L + +Y+ YT + + C Q+ D+ Q L+ +
Sbjct: 236 MEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHSE 281
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 124/280 (44%), Positives = 166/280 (59%)
Query: 447 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDL 506
CG FTSK+EGM D+ L+++ F++Y+ N QN I+L+V +LT G+WP+Y ++
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEV 60
Query: 507 NLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLL 566
+LP EMVK E+FK FY K RKL W +LG C + +F++ EL VS +Q LL+
Sbjct: 61 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM 120
Query: 567 FNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFT 626
FN + S EI + +L R L SL+C K ++L K P K I D F N F
Sbjct: 121 FNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFK 180
Query: 627 DRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVE 682
++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK L H LVSE
Sbjct: 181 HKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYN 240
Query: 683 QLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
QL KP +KKR+E LI RDY+ERDKENPN + Y+A
Sbjct: 241 QLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 278
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 439 (159.6 bits), Expect = 4.0e-51, Sum P(3) = 4.0e-51
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 223 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 282
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 283 GMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 337
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 338 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 393
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 394 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 453
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 513
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 514 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 573
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 574 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 633
Query: 593 LHSL 596
L SL
Sbjct: 634 LWSL 637
Score = 133 (51.9 bits), Expect = 4.0e-51, Sum P(3) = 4.0e-51
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 660 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 719
A+++IMK RK + + QL +E VE L MF P K IK++ME LI Y+ RD+ + N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFI 777
Query: 720 YLA 722
Y+A
Sbjct: 778 YMA 780
Score = 68 (29.0 bits), Expect = 4.0e-51, Sum P(3) = 4.0e-51
Identities = 23/123 (18%), Positives = 53/123 (43%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
++ ++ + WD+M + KL R ES + +++ L++ ++ +C S +
Sbjct: 9 NKGSLQFEDKWDFMHPIVLKLLR-----QES-VTKQQWFDLFSDVHAVCLWDDKG--SSK 60
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
++ K+ E+I LS + D +L+ + W L + F L+ +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLG 120
Query: 122 RRS 124
++S
Sbjct: 121 KQS 123
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 439 (159.6 bits), Expect = 6.5e-51, Sum P(3) = 6.5e-51
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 223 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 282
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 283 GMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 337
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 338 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 393
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 394 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 453
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 513
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 514 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 573
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 574 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 633
Query: 593 LHSL 596
L SL
Sbjct: 634 LWSL 637
Score = 134 (52.2 bits), Expect = 6.5e-51, Sum P(3) = 6.5e-51
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 600 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 647
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 644 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 703
Query: 648 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 704 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 763
Query: 706 DYLERDKENPNMFRYLA 722
Y+ RD+ + N F Y+A
Sbjct: 764 KYIRRDESDINTFIYMA 780
Score = 65 (27.9 bits), Expect = 6.5e-51, Sum P(3) = 6.5e-51
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYS 59
++ ++ + WD+M+ + KL R + + +++ L++ ++ +C K P
Sbjct: 9 NKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGPAKIH 62
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
Q L K+ E+I LS + D +L+ + W
Sbjct: 63 QAL----KEDILEFIKQAQARVLSHQDDTALLKAYIVEW 97
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 439 (159.6 bits), Expect = 6.5e-51, Sum P(3) = 6.5e-51
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 223 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 282
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 283 GMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 337
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 338 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 393
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 394 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 453
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 513
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 514 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 573
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 574 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 633
Query: 593 LHSL 596
L SL
Sbjct: 634 LWSL 637
Score = 134 (52.2 bits), Expect = 6.5e-51, Sum P(3) = 6.5e-51
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 600 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 647
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 644 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 703
Query: 648 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 704 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 763
Query: 706 DYLERDKENPNMFRYLA 722
Y+ RD+ + N F Y+A
Sbjct: 764 KYIRRDESDINTFIYMA 780
Score = 65 (27.9 bits), Expect = 6.5e-51, Sum P(3) = 6.5e-51
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYS 59
++ ++ + WD+M+ + KL R + + +++ L++ ++ +C K P
Sbjct: 9 NKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGPAKIH 62
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
Q L K+ E+I LS + D +L+ + W
Sbjct: 63 QAL----KEDILEFIKQAQARVLSHQDDTALLKAYIVEW 97
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 437 (158.9 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 223 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 282
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 283 GMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 337
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 338 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 393
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 394 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 453
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 513
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 514 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 573
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 574 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 633
Query: 593 LHSL 596
L SL
Sbjct: 634 LWSL 637
Score = 130 (50.8 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 660 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 719
A+++IMK RK + + QL +E VE L MF P K IK+++E LI Y+ RD+ + N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777
Query: 720 YLA 722
Y+A
Sbjct: 778 YMA 780
Score = 69 (29.3 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 23/123 (18%), Positives = 54/123 (43%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
++ ++ + WD+M+ + KL R ES + +++ L++ ++ +C S +
Sbjct: 9 NKGSLQFEDKWDFMRPIVLKLLR-----QES-VTKQQWFDLFSDVHAVCLWDDKG--SSK 60
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
++ K+ E+I LS + D +L+ + W L + F L+ +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLG 120
Query: 122 RRS 124
++S
Sbjct: 121 KQS 123
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 437 (158.9 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 223 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 282
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 283 GMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 337
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 338 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 393
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 394 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 453
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 513
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 514 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 573
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 574 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 633
Query: 593 LHSL 596
L SL
Sbjct: 634 LWSL 637
Score = 130 (50.8 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 660 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 719
A+++IMK RK + + QL +E VE L MF P K IK+++E LI Y+ RD+ + N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777
Query: 720 YLA 722
Y+A
Sbjct: 778 YMA 780
Score = 69 (29.3 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 23/123 (18%), Positives = 54/123 (43%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQ 61
++ ++ + WD+M+ + KL R ES + +++ L++ ++ +C S +
Sbjct: 9 NKGSLQFEDKWDFMRPIVLKLLR-----QES-VTKQQWFDLFSDVHAVCLWDDKG--SSK 60
Query: 62 LYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIA 121
++ K+ E+I LS + D +L+ + W L + F L+ +
Sbjct: 61 IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLG 120
Query: 122 RRS 124
++S
Sbjct: 121 KQS 123
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 440 (159.9 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 159 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 218
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 219 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 278
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 279 GMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIVSAGLADMVAAAETITTDS----- 333
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 334 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 389
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 390 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 449
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 450 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 509
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 510 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 569
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 570 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 629
Query: 593 LHSL 596
L SL
Sbjct: 630 LWSL 633
Score = 132 (51.5 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 600 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 647
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 640 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 699
Query: 648 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 700 NEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 759
Query: 706 DYLERDKENPNMFRYLA 722
Y+ RD+ + N F Y+A
Sbjct: 760 KYIRRDESDINTFIYMA 776
Score = 62 (26.9 bits), Expect = 1.5e-50, Sum P(3) = 1.5e-50
Identities = 19/99 (19%), Positives = 44/99 (44%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYS 59
++ ++ + WD+M+ + KL R + + +++ L++ ++ +C K P
Sbjct: 5 NKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGPAKIH 58
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
Q L K+ ++I LS + D +L+ + W
Sbjct: 59 QAL----KEDILDFIKQAQARVLSHQDDTALLKAYIVEW 93
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 439 (159.6 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 142 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 201
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 202 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 261
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 262 GMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 316
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 317 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 372
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 373 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 432
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 433 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 492
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 493 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 552
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 553 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 612
Query: 593 LHSL 596
L SL
Sbjct: 613 LWSL 616
Score = 134 (52.2 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 600 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 647
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 623 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 682
Query: 648 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 683 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 742
Query: 706 DYLERDKENPNMFRYLA 722
Y+ RD+ + N F Y+A
Sbjct: 743 KYIRRDESDINTFIYMA 759
Score = 51 (23.0 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 25 ILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYSQQLYDKYKQAFEEYISSMVLPSL 82
+L+ L + + +++ L++ ++ +C K P Q L K+ E+I L
Sbjct: 5 VLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQAL----KEDILEFIKQAQARVL 60
Query: 83 SEKHDEYMLRELVKRW 98
S + D +L+ + W
Sbjct: 61 SHQDDTALLKAYIVEW 76
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 439 (159.6 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 127/484 (26%), Positives = 231/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 142 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 201
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 202 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 261
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ E L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 262 GMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 316
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 317 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKG 372
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 373 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRY 432
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + +F+E
Sbjct: 433 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEM 492
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
NN+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 493 HKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHW 552
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 553 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 612
Query: 593 LHSL 596
L SL
Sbjct: 613 LWSL 616
Score = 134 (52.2 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 600 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 647
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 623 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 682
Query: 648 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 683 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 742
Query: 706 DYLERDKENPNMFRYLA 722
Y+ RD+ + N F Y+A
Sbjct: 743 KYIRRDESDINTFIYMA 759
Score = 51 (23.0 bits), Expect = 1.3e-49, Sum P(3) = 1.3e-49
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 25 ILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYSQQLYDKYKQAFEEYISSMVLPSL 82
+L+ L + + +++ L++ ++ +C K P Q L K+ E+I L
Sbjct: 5 VLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAKIHQAL----KEDILEFIKQAQARVL 60
Query: 83 SEKHDEYMLRELVKRW 98
S + D +L+ + W
Sbjct: 61 SHQDDTALLKAYIVEW 76
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 418 (152.2 bits), Expect = 8.3e-47, Sum P(3) = 8.3e-47
Identities = 123/484 (25%), Positives = 229/484 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKSYLDSTERFYRTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ L++E R YL + E V+ + + T E + C
Sbjct: 223 QQNGVQNYMKYADAKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECP 282
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSG 315
+++ ++ + L M+ L K+P G+EP+ ++HI + G +V AE T+
Sbjct: 283 GMIKRNETDKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS----- 337
Query: 316 AVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN-------------KA 362
+ + +++ L +++ + V F + F A +A++ N K
Sbjct: 338 ----EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPMKQKG 393
Query: 363 VG-----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEF 416
VG S ELLA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +
Sbjct: 394 VGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEDIELKLKEVLLVLKYVQNKDVFMRY 453
Query: 417 YRKKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEY 475
++ L RRL+ D SA+ + E +++ L++ + +K+ M D+ ++ + F+E
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQVFKEM 513
Query: 476 LSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTW 534
+N+ A P +++ +L G W S + ++LP+E+ + + FY+ RKL W
Sbjct: 514 HKHNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHW 573
Query: 535 IYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRL 592
+ + I K E +L V+T+Q A L +N R +S+ + L +L R
Sbjct: 574 HHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRT 633
Query: 593 LHSL 596
L SL
Sbjct: 634 LWSL 637
Score = 133 (51.9 bits), Expect = 8.3e-47, Sum P(3) = 8.3e-47
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 600 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 647
K ++LL EP K + S F N +F+ +R KI L ER + E
Sbjct: 644 KRQVLLYEPQVSSPKDFTDSTLFFVNQEFSLIKNSKAQKRGKINLIGRLQLTTERMREEE 703
Query: 648 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 705
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 704 NEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 763
Query: 706 DYLERDKENPNMFRYLA 722
Y++RD+ + N F Y+A
Sbjct: 764 KYIKRDETDINTFIYMA 780
Score = 52 (23.4 bits), Expect = 8.3e-47, Sum P(3) = 8.3e-47
Identities = 18/99 (18%), Positives = 42/99 (42%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYS 59
++ ++ + WD M+ + KL R + + +++ ++ ++ +C K P
Sbjct: 9 NKGSLQFEDKWDLMRPIVLKLLR------QESVTKQQWFDQFSDVHAVCLWDDKGPAKIH 62
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
Q L K+ ++I LS + D +L+ + W
Sbjct: 63 QAL----KEDILDFIKQAQARVLSHQDDTALLKAYIVEW 97
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 445 (161.7 bits), Expect = 8.7e-47, Sum P(2) = 8.7e-47
Identities = 145/520 (27%), Positives = 249/520 (47%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEI----GMGQMDSYEKDFEEHMLQDTGAYYSRKASNW 195
+ +ER+G ID + + + FV + G + Y + FE ++ T YY + N
Sbjct: 147 VKEERDGNIIDAQNVIGIRESFVALNDRAGEDPLLVYRQSFERQFIEQTTEYYKKICGNL 206
Query: 196 ILEDSCPEYMIKAEECLKKERDRVSHYL--HSSSEPKLVEKVQHELLVVYATELLEKEQS 253
+ E EYM+ A++ L++E+ R YL +S + K +EK L+ + +L +
Sbjct: 207 LNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSGKHMEKAVIALVESFEDTILAE--- 263
Query: 254 GCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGS 313
C L+ VE L R+YRL + G++ V HI EG D N
Sbjct: 264 -CSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCIDTHIRTEGL------NDMRNNAENL 316
Query: 314 SGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFE-------IFCNKAVG-- 364
S + +++++ + DK+ V F + A +AF IF + +
Sbjct: 317 S--TDPERYVQQLLLMFDKFSSLVREGFCDDARLLTARDKAFRAVVNDSSIFKTEMMNKK 374
Query: 365 G------SSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFY 417
G S +ELLA +CD +L+K ++KL+ E I+E L +V+ +L Y+ +KD+F F+
Sbjct: 375 GRTLSVESKCAELLANYCDLLLRKTQLSKKLTSEEIDEKLNQVLLVLKYVENKDVFMRFH 434
Query: 418 RKKLARRLLFDRSANDDHERSILTKLKQQCG--GQFTSKMEGMVTDLTLARENQTSFEEY 475
R L+RRL+ + SA+ + E ++TKL++ CG +K+ M+ D+ L ++ +SF++
Sbjct: 435 RAHLSRRLILEMSADQEKEEMMVTKLRE-CGMPSDAVNKLSRMLQDIELNKDMNSSFKKA 493
Query: 476 LSN-NQNAHPGIDLSVTVLTTGFWPSYKSSDL--NLPSEMVKCVEVFKGFYETKTKHRKL 532
L+ N N +++ VL G W S + +LP E+ V + FY+ + RKL
Sbjct: 494 LTGTNNNKSIADSINMKVLNGGAWGRGGSERIRFSLPRELEDFVPEMEAFYKKQHNGRKL 553
Query: 533 TWIY--SLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEIMTQLNLTHDD 588
W++ S G + G +L +T+Q A L FN D++S + L +
Sbjct: 554 CWMHHWSSGTM-VFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAE 612
Query: 589 LVRLLHSLSC---AKYKILLKEPNTKTISQSDHFEFNSKF 625
L R L SL +Y+ILL + + T++ D F ++KF
Sbjct: 613 LNRTLLSLVAYPKMRYQILLCDVPSTTVTARD-FTDSTKF 651
Score = 114 (45.2 bits), Expect = 8.7e-47, Sum P(2) = 8.7e-47
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 631 RIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKP 690
R+++ L E++ E + R + +V+I+K+RK QL E VE L +F P
Sbjct: 676 RLQLSLEANAEKEH--ESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIP 733
Query: 691 DIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
+ K IK++++ LI Y+ER ++ N F Y++
Sbjct: 734 NRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 345 (126.5 bits), Expect = 2.3e-43, Sum P(3) = 2.3e-43
Identities = 115/470 (24%), Positives = 219/470 (46%)
Query: 169 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE 228
++ Y + FE+ L+ T YY++ ++++ + S EY+ +A E +K+E ++ Y ++
Sbjct: 217 LNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTK 276
Query: 229 PKL------------VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHK 276
L +EK+++E +V+ +EK S AL+R D + RM ++
Sbjct: 277 KPLSMALNKVLITDHIEKLENEFVVLLDARDIEKITS-LYALIRRDFTL-IPRMASVFEN 334
Query: 277 IPK--GLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYM 334
K G ++++ H + ++ + + ++ ++ + I+K++E+HD +
Sbjct: 335 YVKKTGENEISSLLAMH---KHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFS 391
Query: 335 EYVTNCFINHTLFHKALKEAFEIFCN-----KAVGG-----SSSSELLATFCDNILKKGG 384
+ F + KAL A F N G S +SE+LA + D +LKK
Sbjct: 392 KIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKAT 451
Query: 385 NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLK 444
+++ + +E ++ + Y++DKD F YR+ A+RL+ S + + E +I+ +L+
Sbjct: 452 KPEVASDMSDED---IITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQ 508
Query: 445 QQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGI--DLSVTVLTTGFWP-SY 501
++T K+ M D+ L++ + F L N + DL VL WP SY
Sbjct: 509 AANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSY 568
Query: 502 KSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL--GQCNIN-GKFEQKNIELIVST 558
+ + LP E+V E K Y K R L W++ L G+ + GK + V+
Sbjct: 569 QEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTL 628
Query: 559 YQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP 608
+Q A LLL+N +D L+ I +LT + + + K+K++ + P
Sbjct: 629 FQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAM--VPFIKFKLIQQVP 676
Score = 149 (57.5 bits), Expect = 2.1e-21, Sum P(3) = 2.1e-21
Identities = 52/243 (21%), Positives = 114/243 (46%)
Query: 138 EQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDS-------YEKDFEEHMLQDTGAYYSR 190
+Q+ REG+ I R+ + + V +G+ D Y + FE+ L+ T YY++
Sbjct: 179 DQVTLGREGQIIQRSNISTAIKSLVALGIDPQDLKKLNLNVYIQVFEKPFLKKTQEYYTQ 238
Query: 191 KASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEK 250
++++ + S EY+ +A E +K+E ++ Y ++ K + +++L+ T+ +EK
Sbjct: 239 YTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTK-KPLSMALNKVLI---TDHIEK 294
Query: 251 EQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEG-----TVLVQQAED 305
++ LL +E ++ +Y L + + +A+VF+ ++ G ++L +
Sbjct: 295 LENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFENYVKKTGENEISSLLAMHKHN 354
Query: 306 AATNQGGS--------SGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEI 357
N+ + + ++ + I+K++E+HD + + F + KAL A
Sbjct: 355 IMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGA 414
Query: 358 FCN 360
F N
Sbjct: 415 FIN 417
Score = 139 (54.0 bits), Expect = 2.3e-43, Sum P(3) = 2.3e-43
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 641 ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 700
E ++I ++++ +R+ ++A +VRIMK+++ L H LV+EC+ Q + F + +K+ ++
Sbjct: 735 EDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAID 794
Query: 701 DLITRDYLERDKENPNMFRYLA 722
LI + YL+R + + + YLA
Sbjct: 795 SLIQKGYLQRGDDGES-YAYLA 815
Score = 98 (39.6 bits), Expect = 2.3e-43, Sum P(3) = 2.3e-43
Identities = 32/137 (23%), Positives = 63/137 (45%)
Query: 7 DLDQGWDYMQKGITKL---KRILEGLPESPF---SSEEYMMLYTTIYNMCTQKPPHD--Y 58
DL+ W++++ GI ++ ++ + + S YM +YT IYN C K +
Sbjct: 10 DLEATWNFIEPGINQILGNEKNQASTSKRVYKILSPTMYMEVYTAIYNYCVNKSRSSGHF 69
Query: 59 S-------------QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMV 105
S ++Y+K K Y+ + +L + + + E L+ VKRW +
Sbjct: 70 STDSRTGQSTILVGSEIYEKLKN----YLKNYIL-NFKQSNSETFLQFYVKRWKRFTIGA 124
Query: 106 RWLSRFFHYLDRYFIAR 122
+L+ F Y++RY++ +
Sbjct: 125 IFLNHAFDYMNRYWVQK 141
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 468 (169.8 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 165/626 (26%), Positives = 289/626 (46%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER G+ D L+ V + +V + D Y ++FE L+ T +Y K++
Sbjct: 241 VHAERNGDAYDAQLVVGVRESYVNLSSNAEDKLEIYRENFEMAYLKATVEFYRLKSAEQQ 300
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
E+ YM A+ L++E R YL SS L + + L+V + ++ + C
Sbjct: 301 QENGVLAYMKYADSKLREEEVRAKRYLEPSSFSILTYTLVNVLIVDHLNSIIAE----CP 356
Query: 257 ALLREDKVEDLSRMYRLYHKIPKGL--EPVANVFKQHITAEGTVLVQQAEDAATNQGGSS 314
AL+R+ + E L+ M+RL ++ G+ EP+ ++HI + G + A + T S
Sbjct: 357 ALIRDYETERLNLMFRLMDRVMHGVGVEPMMGDLQRHIMSAGLADMLSASEVITQD--SE 414
Query: 315 GAVQEQV-LIRKIIEL-----HD--KYM---EYVTNCFINHTLFHKALKEAFEIFCNKAV 363
V+ + L K +L +D +++ + +N T K E N+ V
Sbjct: 415 KYVERLLELFNKFSDLVRNAFNDDPRFLTARDIAFKTVVNDTSVFKM--ELPTSIANRGV 472
Query: 364 G----GSSSSELLATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYR 418
S ELLA +CD +L++ +++L+ E I+ L V+ +L Y+++KD+F +++
Sbjct: 473 KYTAPESKCPELLANYCDMLLRRTPLSKRLTSEQIDARLRDVLLVLKYVNNKDVFMRYHK 532
Query: 419 KKLARRLLFDRSANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLS 477
L RRL+ SA+ + E I+ L++ + +++ M D+ ++ + T F +S
Sbjct: 533 VHLTRRLILGTSADSEKEEDIVEWLREVGMPADYVNRLARMFQDIKVSEDLNTQFRTSIS 592
Query: 478 NNQNAHPGIDLSVTVLTTGFWPSYKSS-DLNLPSEMVKCVEVFKGFYETKTKHRKLTWIY 536
H I++ + L G W ++LP E+ + + FY+ K RKL W +
Sbjct: 593 R----HDAINIKI--LNAGAWARCSERVSVSLPIELEDYIPDVEEFYKKKHSGRKLQWYH 646
Query: 537 SLGQCNINGKFEQKNIELIVSTYQAATLLLFNTS--DRLSYSEIMTQLNLTHDDLVRLLH 594
+ I +L V+T+Q A L +N D++SY + L +L R L
Sbjct: 647 HMSNGTITFVNNFGRYDLDVTTFQMAVLFAWNQRQHDKISYENLRLATELPDPELRRTLW 706
Query: 595 SLSC---AKYKILLKEP----NTKTISQSDHFEFNSKFT-----DRMRRIKIPLP---PV 639
SL K +ILL EP + K +++ F N +F RR K+ L +
Sbjct: 707 SLVAFPKIKKQILLMEPAAISSPKDFAENTMFYINQEFAIVKNGKSQRRGKLNLIGRLQL 766
Query: 640 DERKKIVED---VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 696
+ ED + + R A+++IMK RK + + L E ++ L MF P K IK
Sbjct: 767 STERSQQEDNQSIVQLRILRTQEAIIKIMKVRKRMNNAALQGELIDILKNMFLPSKKMIK 826
Query: 697 KRMEDLITRDYLERDKENPNMFRYLA 722
+++E LI Y+ RD ++ NMF Y+A
Sbjct: 827 EQLEWLIENKYMRRDDDDINMFIYVA 852
Score = 50 (22.7 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 17/97 (17%), Positives = 41/97 (42%)
Query: 21 KLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLP 80
K + +L+ L + S E+ L+ ++ +C + ++YD +Q E+I
Sbjct: 20 KRRIVLKLLRQDTVSQREWQDLFFGVHFVCLWDEKG--AAKIYDCLQQDIVEFIVQAQSQ 77
Query: 81 SLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDR 117
+++ ++ +L + W +L F L++
Sbjct: 78 VQAQRGEQALLATYIVEWRKFFTQSNYLPLPFRQLEQ 114
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 337 (123.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 597
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 117 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 175
Query: 598 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 649
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 176 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 235
Query: 650 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 709
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 236 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 295
Query: 710 RDKENPNMFRYLA 722
R E+ ++ Y+A
Sbjct: 296 RTPEDRKVYTYVA 308
Score = 125 (49.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 475 YLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHRKLT 533
+ S Q + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R+LT
Sbjct: 30 FFSFTQVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLT 89
Query: 534 WIYSLGQCNINGKF 547
+ +G ++N F
Sbjct: 90 LQHHMGSADLNATF 103
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 186 (70.5 bits), Expect = 1.3e-36, Sum P(4) = 1.3e-36
Identities = 33/83 (39%), Positives = 61/83 (73%)
Query: 640 DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRM 699
+E +++ ++ + R+ ++AA+VRI+KSR+ + H L+ E ++QLS F+P I IK+R+
Sbjct: 777 EELEEVNANIMEGRKIEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPSIILIKQRI 836
Query: 700 EDLITRDYLERDKENPNMFRYLA 722
EDLI ++YL+RD ++ N++ Y+A
Sbjct: 837 EDLIDKEYLKRDTDDRNLYHYIA 859
Score = 165 (63.1 bits), Expect = 1.3e-36, Sum P(4) = 1.3e-36
Identities = 57/257 (22%), Positives = 109/257 (42%)
Query: 339 NCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK---KGG--NEKLS---D 390
N I T F A+++ + ++ ELL+ + D +K KG N+ +S
Sbjct: 407 NLMIEQT-FTFAMRDFINGSNKRGPASVNAPELLSVYMDYFIKQLTKGSSSNKDISLKSG 465
Query: 391 EAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR-----SANDDHERSILTKLKQ 445
+ E+ + ++ L +I DKD F Y A+R L + S+N D E IL KL +
Sbjct: 466 DQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSE 525
Query: 446 QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPS----- 500
+ G K+ M D+ +++ ++ YL+ + +++ + + WP
Sbjct: 526 EMGTSSLDKVIKMNRDVRSSKDTTNDWKRYLNKQSKSTDLVEMELKICNVTDWPKSMTKD 585
Query: 501 YK--------SSDLNLPSEMVKCVEVFKGFYET--KTKHRKLTWIYSLGQCNINGKFEQK 550
YK + P ++ ++ F F+ K ++ L W G ++ + +
Sbjct: 586 YKWFSRTENEETPFKWPRQLRNTIKQFDEFWSNGKKNDNKSLYWSPKFGSMDLRITYPSR 645
Query: 551 NIELIVSTYQAATLLLF 567
E+ +ST+ A +LLF
Sbjct: 646 TYEINLSTFAAIIMLLF 662
Score = 120 (47.3 bits), Expect = 1.3e-36, Sum P(4) = 1.3e-36
Identities = 32/156 (20%), Positives = 73/156 (46%)
Query: 6 IDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDK 65
ID D+ W + I++++ S+ Y LY Y + +K + +LYD
Sbjct: 34 IDFDKNWSVLSSAISQIQN-------KNVSNLSYEQLYRKAYVLVLRK----FGGKLYDN 82
Query: 66 YKQAFEEYISSM--VLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARR 123
+ ++ + L S+S HD +M + +++ W+ H ++++S YL++ ++A
Sbjct: 83 VANVIKTHLLTRREKLLSVSANHDLFM-QSILQEWSEHLQAMKFISDVLMYLNKVYVAEH 141
Query: 124 SLPALNEVGLTCFREQIDKEREGEQIDRALLKNVLD 159
+ ++G+ F++ + K E + ++ V+D
Sbjct: 142 KKLLIYDLGIQLFKDYVIKYNNDE-VGSKIVNMVID 176
Score = 113 (44.8 bits), Expect = 2.9e-31, Sum P(4) = 2.9e-31
Identities = 32/125 (25%), Positives = 62/125 (49%)
Query: 526 KTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLF----NTSD---------- 571
K ++ L W G ++ + + E+ +ST+ A +LLF +D
Sbjct: 621 KNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEM 680
Query: 572 -RLSYSEIMTQLNLTHDDLVRLLHSLSCA-KYKILLKEPNTKTISQSDHFEFNSKFTDRM 629
L+Y EI+ + +L R L S++ A K ++L+K P +K ++++D F+ N+KF
Sbjct: 681 KELTYEEILELTGIPEPELKRHLQSIAVAPKSRLLVKVPMSKDVNKNDVFKLNAKFKSPS 740
Query: 630 RRIKI 634
++K+
Sbjct: 741 VKVKV 745
Score = 104 (41.7 bits), Expect = 1.3e-36, Sum P(4) = 1.3e-36
Identities = 53/248 (21%), Positives = 101/248 (40%)
Query: 138 EQIDKEREGEQIDRAL----LKNVLDIFVE-IGMGQM---DSYEK-DFEEHMLQDTGAYY 188
++I K R G I ++ + N++++ VE G + DSY + FE L+ +
Sbjct: 176 DEIAKSRTGVVITSSMYITKIINMMELLVEPSGSSDILFGDSYYQIKFEPKFLKSSEESL 235
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ ++ + +Y+ + +K E +RV YL S+ PKLVE + + ++ +++
Sbjct: 236 YNLSQEFVSHNLGTKYLQLTTQFIKDEDNRVRFYLPPSTYPKLVELMNNIMIKDKIDKMI 295
Query: 249 EKEQSGCRALLR-------ED-KVE-----DLSRMYRLYHKIPKGLEPVANVFKQHITAE 295
G L+ ED +E DL +Y L + + + K+ I A+
Sbjct: 296 LSSNQGLEYWLKPVVSNIFEDTNIETYHYADLKMLYNLIGRFDDEYQLLRLRLKEAIVAQ 355
Query: 296 GTVLVQQAEDAATNQG---GSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 352
G L + N G ++ I I++ D+ M+ N F + + +
Sbjct: 356 GNSLPDYVRSSIENSGKKQSNNSPAFATKWIETILKYRDQLMQVWKNSFDENLMIEQTFT 415
Query: 353 EAFEIFCN 360
A F N
Sbjct: 416 FAMRDFIN 423
Score = 37 (18.1 bits), Expect = 3.5e-21, Sum P(4) = 3.5e-21
Identities = 17/112 (15%), Positives = 49/112 (43%)
Query: 543 INGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK 602
+N KF+ ++++ V T A++ ++S S + + ++ + +++ K
Sbjct: 732 LNAKFKSPSVKVKVLTVSASSSSSASSSSSSSKNTNKSVAKTEQEEELEEVNANIMEGRK 791
Query: 603 ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPP-VDERKKIVED-VDKD 652
I + + + + N + ++++ P + K+ +ED +DK+
Sbjct: 792 IEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPSIILIKQRIEDLIDKE 843
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 329 (120.9 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 105/386 (27%), Positives = 187/386 (48%)
Query: 266 DLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVL-- 322
+L M+ L K+P G+EP+ + HI + G +V AE T+ S EQ+L
Sbjct: 307 ELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTD----SEKYVEQLLTL 362
Query: 323 ---IRKII-ELHDKYMEYVTN------CFINH-TLFHKALKEAFEIFCNKAVGGSSSSEL 371
K++ E ++T+ +N T+F L + K S EL
Sbjct: 363 FNRFSKLVKEAFQDDPRFLTSRDKAYKAVVNDATIFKLELPLKQKGVSLKTQPESKCPEL 422
Query: 372 LATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 430
LA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D S
Sbjct: 423 LANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDIS 482
Query: 431 ANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLS 489
A+ + E +++ L++ + +K+ M D+ ++ + SF+E +N+ A P ++
Sbjct: 483 ADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVN 542
Query: 490 VTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 548
+ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E
Sbjct: 543 IKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNE 602
Query: 549 QKNIELIVSTYQAATLLLFNTS--DRLSYSEIMTQLNLTHDDLVRLLHSLSC---AKYKI 603
+L V+T+Q A L +N +R+S+ + L +L R L SL K ++
Sbjct: 603 VGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQV 662
Query: 604 LLKEP---NTKTISQSDHFEFNSKFT 626
L EP + K ++ F N +F+
Sbjct: 663 LSYEPVVGSPKDFAEGTVFSINQEFS 688
Score = 153 (58.9 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 52/242 (21%), Positives = 103/242 (42%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y ++FE+ L T +Y +A +++
Sbjct: 163 VHAERLGEAFDSQLVIGVRESYVNLCSNTDDKLQIYRENFEKSYLDSTERFYKTQAPSYL 222
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ L++E R YL + E V+ + + T E + C
Sbjct: 223 QQNGVQNYMKYADGKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILTECP 282
Query: 257 ALLREDKVE---------------DLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LV 300
+++ ++ E +L M+ L K+P G+EP+ + HI + G +V
Sbjct: 283 GMIKRNETESEYGRSSGTKGSASSELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMV 342
Query: 301 QQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN 360
AE T+ + + +++ L +++ + V F + F + +A++ N
Sbjct: 343 ASAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTSRDKAYKAVVN 393
Query: 361 KA 362
A
Sbjct: 394 DA 395
Score = 130 (50.8 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 660 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 719
A+++IMK RK + + QL +E VE L MF P K IK+++E LI Y++RD+ + N F
Sbjct: 733 AIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFI 792
Query: 720 YLA 722
Y+A
Sbjct: 793 YMA 795
Score = 58 (25.5 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 19/99 (19%), Positives = 43/99 (43%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYS 59
++ ++ + WD M+ + KL R + + +++ L++ ++ +C K P
Sbjct: 9 NKGSLQFEDKWDLMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGPAKIH 62
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
Q L K+ ++I LS + D +L+ + W
Sbjct: 63 QAL----KEDILDFIKQAQARVLSHQDDTALLKAYIVEW 97
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 397 (144.8 bits), Expect = 7.1e-34, P = 7.1e-34
Identities = 174/747 (23%), Positives = 342/747 (45%)
Query: 22 LKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLPS 81
+K ++ + + + +Y TIY + K LY++ K + ++ +
Sbjct: 29 VKYAIDHIYSDDMADLSFEQVYKTIYTIVLNKK----GPILYNRLKDYLIQKLALLRETI 84
Query: 82 LSEK-HDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFREQI 140
+ + HD L + + W + Y+D+ + + ++ L FR +I
Sbjct: 85 VKDNTHDYEFLGTMARLWEVQCHCFKITGDLMMYMDKVYCKPNRCMEVYDMCLDLFRIEI 144
Query: 141 DKEREGEQIDRAL-----LKNVLDIFVE--------IGMGQM-----DSYE-KDFEEHML 181
++ I + ++N+ + E IGM + DS+ DFE ++
Sbjct: 145 LQKCSSSLISALISDIERIRNLGSVDSEHTSLWKVLIGMMETLHDNRDSFFLTDFEPVLI 204
Query: 182 QDTGAYYSRKASNWILEDSCP-EYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELL 240
T YY+ KA + +E P E + K + + E S +L+ S KL +++ L+
Sbjct: 205 SATEEYYN-KAID--IELLTPIESLEKIRKLRQFESMLDSSFLNVDSHNKLKTVLENVLI 261
Query: 241 VVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLV 300
++++E + + ++ K+ L +Y L + K V K +I
Sbjct: 262 WGKLSDIIE-DLTHEAMVISNGKL--LQEIYDLSSE-EKYRVTVIESIKSYIN------- 310
Query: 301 QQAEDAATNQGGSSGAVQEQVLIRKIIELH---DKYMEYVT--NCFINHT---LFHKALK 352
+ A + N+G +I+EL+ ++E + + +N+ + + L
Sbjct: 311 KNAINIPFNEGNRKKGQNAITWSSEIVELYRSQHSFLESIDFGSVRLNNLTGDVSNAILG 370
Query: 353 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 412
+ F ++ +K G+ SE L+T+ D+ +K+ + I++ L KL+ +++KD+
Sbjct: 371 DVFSMYFSKE--GALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTEKDI 428
Query: 413 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 472
F + Y+K+L+RRLL RS + E+ ++ +K+ G FTSK+E M+ D++L+ E +F
Sbjct: 429 FEKIYKKQLSRRLLQQRSLVEI-EKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQAF 487
Query: 473 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-----LNLPSEMVKCVEVFKGFYETKT 527
+ + N+ + + VLT WP ++S++ ++LP M + + F+G+Y K
Sbjct: 488 QH---STINSIEYLSFAPQVLTRTSWP-FQSTNPIDEGISLPPRMSQILAGFEGYYSLKY 543
Query: 528 KHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHD 587
K R L W + L I +F E+ S Y LLF + L+ EI ++ D
Sbjct: 544 KERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPID 603
Query: 588 DLVRLLHSLSCA-KYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLP--PVDERKK 644
D+ L+ S+S + KIL K ++ + F N F+ R++K+P+ P+ +K
Sbjct: 604 DVKSLVMSMSTIPRCKILKKSSSSGNMK----FSVNYFFSSPNRKVKVPVIACPLPSQKS 659
Query: 645 -------IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQL-SRM-FKPDIKAI 695
V+ D + + A +VRIMK+ L HQQL+ ++ SR+ P I +
Sbjct: 660 DNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSI--L 717
Query: 696 KKRMEDLITRDYLERDKENPNMFRYLA 722
K+ ++ LI ++Y++R+ ++P+ + YL+
Sbjct: 718 KRSIQLLIEKEYIQRNADDPSYYHYLS 744
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 395 (144.1 bits), Expect = 9.4e-34, P = 9.4e-34
Identities = 124/451 (27%), Positives = 228/451 (50%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 264 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 319
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 320 HIKAQIHQFREYSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 379
Query: 131 VGLTCFREQI--DKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYY 188
+GL FR I D++ + + ID LL I E +D ML D Y
Sbjct: 380 MGLELFRAHIISDQKVQNKTIDGILLL----IERERNGEAIDRSLLRSLLSMLSDLQIYQ 435
Query: 189 SRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV----EKVQHE 238
+ LE++ Y + ++ L +ER+ V YLH ++ +L+ + Q
Sbjct: 436 DSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNKRLEEEADRLITYLDQTTQKS 492
Query: 239 LLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHIT 293
L+ +LL + Q G LL E++++DLS +Y+L+ ++ G++ + + ++I
Sbjct: 493 LIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIK 552
Query: 294 AEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKE 353
A G+ +V E +++ +++++++ DK + CF+ + F A+KE
Sbjct: 553 AFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKE 599
Query: 354 AFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLF 413
AFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F
Sbjct: 600 AFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVF 656
Query: 414 AEFYRKKLARRLLFDRSANDDHERSILTKLK 444
FY+K LA+RLL +SA+ D E+S+L+KLK
Sbjct: 657 EAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 687
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 372 (136.0 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 109/386 (28%), Positives = 198/386 (51%)
Query: 348 HKALKEAFEIFCNKAVGGSSS----SELLATFCDNILKKGGNEKLSDEAIEETLEKVVKL 403
H L E + C + + + LL T+ + ++ K + S+EAI + L+++VK
Sbjct: 303 HTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTK---RQESEEAIIDELKRIVKC 359
Query: 404 LAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 463
+ ++SD+ F + Y K L R + + S +D E + + L ++ T + + D+
Sbjct: 360 VEFLSDEYKFIDMYLKALRIRQINETSTSDGVESIMYSLLNKKMANFVTRCIYVQLRDVD 419
Query: 464 LARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFY 523
R + F+++L N++ G D S+++ +L LP E+ + + F+ FY
Sbjct: 420 KLRTLKKEFQDHL-NSKGIKLGFDFRPKCFKND--GSFENFNLTLPDELQQAWKEFRIFY 476
Query: 524 ET-KTKHRKLTWIYS-LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQ 581
E K + + + + + L I Q L VST Q A L+LFN +R + E++T
Sbjct: 477 EARKLQSKAIIQLNNELSSGEITCHLNQSVYILEVSTLQMAVLMLFNRHERFTEQELVTA 536
Query: 582 LNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRI--KIPLP-- 637
L + +L L +L K+ + ++ +++ ++ E N FT+R RR+ PLP
Sbjct: 537 LGV---ELETLQEALKQIKFLVYIE------VNKVNYIEINMDFTNRKRRLFCNEPLPRK 587
Query: 638 --PVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 695
++E+ +I + +D++ +DAA+VRIMK +K L + +L+S E+L KP + I
Sbjct: 588 MRKIEEKSEIELKIRRDKQ--VDAAIVRIMKGQKQLEYSELISLVYEELKDRVKPQVSFI 645
Query: 696 KKRMEDLITRDYLERDKENPNMFRYL 721
KKR++ L+ R+YLERD N++RYL
Sbjct: 646 KKRLDYLVEREYLERDNYY-NIYRYL 670
Score = 46 (21.3 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 18/100 (18%), Positives = 38/100 (38%)
Query: 34 FSSEEYMMLYTTIYNMCTQK-----PPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDE 88
F ++ M LY IY C + P + LY + + ++ ++ D
Sbjct: 35 FDGQKLMHLYHLIYKQCAAERNWNNPAQKNGRSLYIVLSDCLMKRLKNIAWVMENQLDDN 94
Query: 89 YMLRELVK---RWANHKVMVRWLSRFFHYLDRYFIARRSL 125
+R + K W ++ L+ ++ +R ++ R L
Sbjct: 95 KPIRLIAKYLEHWVPYQRSCEKLNLACYHFNRNWVERERL 134
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 333 (122.3 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 105/385 (27%), Positives = 186/385 (48%)
Query: 266 DLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQV-LI 323
+L M+ L K+P G+EP+ ++HI + G +V AE T+ S V++ + L
Sbjct: 302 ELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTD---SEKYVEQLLTLF 358
Query: 324 RKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFC------NKAVG-----GSSSSELL 372
+ +L + + +KA+ IF K VG S ELL
Sbjct: 359 NRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELL 418
Query: 373 ATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSA 431
A +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA
Sbjct: 419 ANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISA 478
Query: 432 NDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSV 490
+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++
Sbjct: 479 DSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNI 538
Query: 491 TVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 549
+L G W S + ++LP+E+ + + FY+ RKL W + + I K E
Sbjct: 539 KILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEV 598
Query: 550 KNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC---AKYKIL 604
+L V+T+Q A L +N R +S+ + L +L R L SL K ++L
Sbjct: 599 GQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVL 658
Query: 605 LKEPNT---KTISQSDHFEFNSKFT 626
L EP K ++ F N +F+
Sbjct: 659 LYEPQVNSPKDFTEGTLFSVNQEFS 683
Score = 165 (63.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 57/242 (23%), Positives = 105/242 (43%)
Query: 140 IDKEREGEQIDRALLKNVLDIFVEIGMGQMDS---YEKDFEEHMLQDTGAYYSRKASNWI 196
+ ER GE D L+ V + +V + D Y +FE+ L T +Y +A +++
Sbjct: 158 VHAERLGEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYL 217
Query: 197 LEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCR 256
++ YM A+ LK+E R YL + E VE + + T E + C+
Sbjct: 218 QQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQ 277
Query: 257 ALLREDK---------VED------LSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LV 300
+++ ++ VED L M+ L K+P G+EP+ ++HI + G +V
Sbjct: 278 GMIKRNETESRYQYLCVEDGSGFSELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMV 337
Query: 301 QQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCN 360
AE T+ + + +++ L +++ + V F + F A +A++ N
Sbjct: 338 AAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVN 388
Query: 361 KA 362
A
Sbjct: 389 DA 390
Score = 65 (27.9 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCT--QKPPHDYS 59
++ ++ + WD+M+ + KL R + + +++ L++ ++ +C K P
Sbjct: 4 NKGSLQFEDKWDFMRPIVLKLLR------QESVTKQQWFDLFSDVHAVCLWDDKGPAKIH 57
Query: 60 QQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRW 98
Q L K+ E+I LS + D +L+ + W
Sbjct: 58 QAL----KEDILEFIKQAQARVLSHQDDTALLKAYIVEW 92
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 186 (70.5 bits), Expect = 9.4e-16, Sum P(3) = 9.4e-16
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 330 HDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLS 389
H+ + + N + N+ + ++ I NK LL D + KK +
Sbjct: 641 HNDNIYFNNNLYFNNDYHNNLYYDSLNI--NKRSDEKIFFHLLKI--DKLFKK---YHII 693
Query: 390 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGG 449
+ I + ++ L Y+SDK+ F ++YR + +RL+ D S N + + LK++CG
Sbjct: 694 GKYIMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGA 753
Query: 450 QFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAH-PGIDLSVTVLTTGFWPSYKSSDLNL 508
QFT K+E ++ D+ + F + L NN N +V ++ W Y +++ N+
Sbjct: 754 QFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESW-EYVNTENNV 812
Query: 509 --PSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 548
P + C E F FY+ K + + ++ LG C + F+
Sbjct: 813 IYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVHFK 854
Score = 114 (45.2 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 55/253 (21%), Positives = 111/253 (43%)
Query: 136 FREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNW 195
+ + + E + Q + + VL + ++I ++ Y+ DFE +T +Y K +
Sbjct: 298 YLDDTNHEYKNTQKKKKINDKVLSLSIKIS-DILNLYD-DFERIYKNETYTFYKEKIEKY 355
Query: 196 ILE------DSCP-EYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ + C ++ I E L E+ R +L +E ++ ++ +LL+V ++L
Sbjct: 356 KKDMETLGYEECNFDFPIIVENYLCHEQIRSRKFLKEHTEITILNMLK-DLLLVKNRDVL 414
Query: 249 EKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAAT 308
K+ S + + ++K + L +Y LY LE +N+F + GT LV
Sbjct: 415 FKD-SYIKYCIIKEKYDPLRSVY-LYSLNLDDLENFSNIFFNVVDNIGTELVNDV----I 468
Query: 309 NQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSS 368
N+ +S + ++ K+I + F + F K +E FE F NK + +
Sbjct: 469 NKRNNSSLLNNAII--KLINFKLNVDRIIIMSFRYSSYFMKKWREVFEHFINKGIQAETY 526
Query: 369 SEL-LATFCDNIL 380
+ L+ + +N+L
Sbjct: 527 MPIILSMYLNNLL 539
Score = 98 (39.6 bits), Expect = 9.4e-16, Sum P(3) = 9.4e-16
Identities = 34/163 (20%), Positives = 78/163 (47%)
Query: 549 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL-SCAKYKILLKE 607
+K I + V+ QA LLLFN + +EI ++ ++++R L ++ + + IL+ +
Sbjct: 959 KKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYD 1018
Query: 608 PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV-EDVD-KDRRYAIDAALVRIM 665
+ + + F KF + + ++ ED + +D+ IDAA+V+ +
Sbjct: 1019 KANEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSLLNEDNEIEDKTLHIDAAIVKFL 1078
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 708
K+ +++ S +++ + IK R+ L++R+++
Sbjct: 1079 KTNGKSSERKICSFIKDKMDISSN---EQIKNRISSLLSREFI 1118
Score = 50 (22.7 bits), Expect = 9.4e-16, Sum P(3) = 9.4e-16
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 46 IYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMV 105
++N C Q ++ +K KQ FEE + + + +E L+ V W N +++
Sbjct: 68 VFNQCEQIICAIIEKECNEKTKQFFEE-VEIRIKNEEFKNGEEEFLKLFVSIWNNFSLVL 126
Query: 106 RWLS 109
+S
Sbjct: 127 IHIS 130
Score = 40 (19.1 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 58 YSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHK 102
Y + Y YK+ E+Y M E + ++ + +V+ + H+
Sbjct: 340 YKNETYTFYKEKIEKYKKDMETLGYEECNFDFPI--IVENYLCHE 382
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 58 YSQQLYDKYKQAFEEYIS 75
YS K+++ FE +I+
Sbjct: 501 YSSYFMKKWREVFEHFIN 518
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 186 (70.5 bits), Expect = 9.4e-16, Sum P(3) = 9.4e-16
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 330 HDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLS 389
H+ + + N + N+ + ++ I NK LL D + KK +
Sbjct: 641 HNDNIYFNNNLYFNNDYHNNLYYDSLNI--NKRSDEKIFFHLLKI--DKLFKK---YHII 693
Query: 390 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGG 449
+ I + ++ L Y+SDK+ F ++YR + +RL+ D S N + + LK++CG
Sbjct: 694 GKYIMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGA 753
Query: 450 QFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAH-PGIDLSVTVLTTGFWPSYKSSDLNL 508
QFT K+E ++ D+ + F + L NN N +V ++ W Y +++ N+
Sbjct: 754 QFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESW-EYVNTENNV 812
Query: 509 --PSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 548
P + C E F FY+ K + + ++ LG C + F+
Sbjct: 813 IYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVHFK 854
Score = 114 (45.2 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 55/253 (21%), Positives = 111/253 (43%)
Query: 136 FREQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNW 195
+ + + E + Q + + VL + ++I ++ Y+ DFE +T +Y K +
Sbjct: 298 YLDDTNHEYKNTQKKKKINDKVLSLSIKIS-DILNLYD-DFERIYKNETYTFYKEKIEKY 355
Query: 196 ILE------DSCP-EYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELL 248
+ + C ++ I E L E+ R +L +E ++ ++ +LL+V ++L
Sbjct: 356 KKDMETLGYEECNFDFPIIVENYLCHEQIRSRKFLKEHTEITILNMLK-DLLLVKNRDVL 414
Query: 249 EKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAAT 308
K+ S + + ++K + L +Y LY LE +N+F + GT LV
Sbjct: 415 FKD-SYIKYCIIKEKYDPLRSVY-LYSLNLDDLENFSNIFFNVVDNIGTELVNDV----I 468
Query: 309 NQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSS 368
N+ +S + ++ K+I + F + F K +E FE F NK + +
Sbjct: 469 NKRNNSSLLNNAII--KLINFKLNVDRIIIMSFRYSSYFMKKWREVFEHFINKGIQAETY 526
Query: 369 SEL-LATFCDNIL 380
+ L+ + +N+L
Sbjct: 527 MPIILSMYLNNLL 539
Score = 98 (39.6 bits), Expect = 9.4e-16, Sum P(3) = 9.4e-16
Identities = 34/163 (20%), Positives = 78/163 (47%)
Query: 549 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL-SCAKYKILLKE 607
+K I + V+ QA LLLFN + +EI ++ ++++R L ++ + + IL+ +
Sbjct: 959 KKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYD 1018
Query: 608 PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV-EDVD-KDRRYAIDAALVRIM 665
+ + + F KF + + ++ ED + +D+ IDAA+V+ +
Sbjct: 1019 KANEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSLLNEDNEIEDKTLHIDAAIVKFL 1078
Query: 666 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 708
K+ +++ S +++ + IK R+ L++R+++
Sbjct: 1079 KTNGKSSERKICSFIKDKMDISSN---EQIKNRISSLLSREFI 1118
Score = 50 (22.7 bits), Expect = 9.4e-16, Sum P(3) = 9.4e-16
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 46 IYNMCTQKPPHDYSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMV 105
++N C Q ++ +K KQ FEE + + + +E L+ V W N +++
Sbjct: 68 VFNQCEQIICAIIEKECNEKTKQFFEE-VEIRIKNEEFKNGEEEFLKLFVSIWNNFSLVL 126
Query: 106 RWLS 109
+S
Sbjct: 127 IHIS 130
Score = 40 (19.1 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 58 YSQQLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHK 102
Y + Y YK+ E+Y M E + ++ + +V+ + H+
Sbjct: 340 YKNETYTFYKEKIEKYKKDMETLGYEECNFDFPI--IVENYLCHE 382
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 58 YSQQLYDKYKQAFEEYIS 75
YS K+++ FE +I+
Sbjct: 501 YSSYFMKKWREVFEHFIN 518
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 205 (77.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 59/227 (25%), Positives = 110/227 (48%)
Query: 13 DYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQQLYDKYKQAFEE 72
+Y + KLK +E + S LY + N+C+ K S LY + +Q E+
Sbjct: 15 NYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYK----ISANLYKQLRQICED 70
Query: 73 YISSMVLPSLSEKHDEYM-LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRS-LPALNE 130
+I + + + D + L+++ + W NH + + F +LDR ++ + S LP++ +
Sbjct: 71 HIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD 130
Query: 131 VGLTCFR-----EQ-------------IDKEREGEQIDRALLKNVLDIFVEIGMGQMDSY 172
+GL FR +Q I++ER GE IDR+LL+++L + + + Y
Sbjct: 131 MGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSM-----LSDLQIY 185
Query: 173 EKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRV 219
+ FE+ L++T Y+ + + E PEY+ + L++E DR+
Sbjct: 186 QDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRL 232
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 189 (71.6 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 38/128 (29%), Positives = 72/128 (56%)
Query: 138 EQIDKEREGEQIDRALLKNVLDIFVEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWIL 197
+ I +ER+GE +DR ++N + + +G+ YE+DFE L+ + ++ ++ ++
Sbjct: 95 DMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLA 154
Query: 198 EDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRA 257
E+S Y+ K E + +E +RV H L S+E +V+ V+ EL+ + ++E E SG
Sbjct: 155 ENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVH 214
Query: 258 LLREDKVE 265
+L+ K E
Sbjct: 215 MLKNGKTE 222
>UNIPROTKB|F1NLT0 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0005680
OMA:MLRGVLF GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 EMBL:AADN02026919 IPI:IPI00604035
Ensembl:ENSGALT00000014053 Uniprot:F1NLT0
Length = 820
Score = 192 (72.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 60/227 (26%), Positives = 100/227 (44%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ LL I KDLF YR LA RLL + + + E + LK + G E M
Sbjct: 499 IISLLVSIYGSKDLFINEYRTLLADRLLHQFNYSAEREIRNVELLKLRFGEAQMHYCEVM 558
Query: 459 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
+ D+ +R N +E + P L +L++ FWP K L LP ++ + +E
Sbjct: 559 LKDMADSRRINANIRDEEEKLPEEERPPFSLVAVILSSEFWPPLKEEKLELPEQVKEAME 618
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 577
+ YE R L W Y LG +++ + + + L VS AA +L F T + +E
Sbjct: 619 AYSKKYEKLKAMRTLNWKYHLGLVSLDVELADRTLSLSVSPVHAAIILHFQTKSTWTLAE 678
Query: 578 IMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSK 624
+ L + L R + +L + + + P T T+ + + + K
Sbjct: 679 LSEVLKVPVTSLKRKM-TLWLQQGVLREEPPGTFTVIEEEQKDQGEK 724
>ASPGD|ASPL0000051025 [details] [associations]
symbol:AN10258 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GO:GO:0031461
EnsemblFungi:CADANIAT00008784 OMA:TWQATVI Uniprot:C8VLZ0
Length = 918
Score = 192 (72.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 60/215 (27%), Positives = 101/215 (46%)
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L++ K+ F R LA RLL R A + E S+L LK + G E M+ D+
Sbjct: 579 LISIFDSKETFVRELRDMLADRLLQKR-AEFEQEMSVLELLKLRFGDNALQACEVMLRDI 637
Query: 463 TLARENQTSF--EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFK 520
+R T ++ ++N+Q+ +L +L+ FWP K +PSE+ + + +
Sbjct: 638 FDSRRVDTVVRNDQGMTNSQDQETP-ELHAKILSHFFWPELKGHQFKVPSEITELQQRYA 696
Query: 521 GFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEI 578
+E+ + RKLTW+ GQ + E + VST+QA + FN T++ S S+
Sbjct: 697 EGFESLKQSRKLTWLNGFGQVTVELDLEDRVFVEEVSTWQATVIYAFNSGTAESESVSKT 756
Query: 579 MTQLNLTHDDLVRLLHS--LSCAKYKILLKEPNTK 611
+ +L+ D L+ S L +IL + P +
Sbjct: 757 IPELSAQLDMSAALVRSACLFWVSRRILTEVPGQR 791
>RGD|1305546 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005680
"anaphase-promoting complex" evidence=ISO] [GO:0031915 "positive
regulation of synaptic plasticity" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
[GO:0070979 "protein K11-linked ubiquitination" evidence=ISO]
[GO:0090129 "positive regulation of synapse maturation"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 RGD:1305546 GO:GO:0005634
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773
GO:GO:0006511 GO:GO:0005680 HOVERGEN:HBG045327 GO:GO:0090129
GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 EMBL:BC107471 IPI:IPI00373399
UniGene:Rn.20099 STRING:Q3B7T7 PhosphoSite:Q3B7T7 UCSC:RGD:1305546
InParanoid:Q3B7T7 ArrayExpress:Q3B7T7 Genevestigator:Q3B7T7
Uniprot:Q3B7T7
Length = 539
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 50/179 (27%), Positives = 83/179 (46%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 218 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 277
Query: 459 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
+ D+ +R N EE P + +L++ FWP +K L +P ++ ++
Sbjct: 278 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 337
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 576
V+ YE R L+W ++LG ++ + + + + V+ QA LL F D+ S++
Sbjct: 338 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQ--DQASWT 394
>MGI|MGI:2139135 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005680 "anaphase-promoting complex" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0045773 "positive regulation of axon extension"
evidence=ISO] [GO:0050775 "positive regulation of dendrite
morphogenesis" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISO] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 UniPathway:UPA00143
MGI:MGI:2139135 GO:GO:0051301 GO:GO:0007067 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773 GO:GO:0006511
GO:GO:0005680 CTD:29882 eggNOG:COG5647 HOVERGEN:HBG045327 KO:K03349
OMA:MLRGVLF OrthoDB:EOG4T1HM4 GO:GO:0090129 GO:GO:0031915
GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 EMBL:AK033784 EMBL:AK170676 EMBL:AL732309
EMBL:BC027351 EMBL:BC137583 IPI:IPI00227654 RefSeq:NP_780509.2
UniGene:Mm.291624 ProteinModelPortal:Q8BZQ7 SMR:Q8BZQ7
STRING:Q8BZQ7 PhosphoSite:Q8BZQ7 PaxDb:Q8BZQ7 PRIDE:Q8BZQ7
Ensembl:ENSMUST00000028341 GeneID:99152 KEGG:mmu:99152
GeneTree:ENSGT00390000016127 InParanoid:Q3TCK5 NextBio:353811
Bgee:Q8BZQ7 CleanEx:MM_ANAPC2 Genevestigator:Q8BZQ7
GermOnline:ENSMUSG00000026965 Uniprot:Q8BZQ7
Length = 837
Score = 170 (64.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 49/181 (27%), Positives = 81/181 (44%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 516 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 575
Query: 459 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
+ D+ +R N EE P + +L++ FWP +K L +P ++ ++
Sbjct: 576 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 635
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 577
V+ YE R L+W ++LG ++ + + + + V+ QA LL F + E
Sbjct: 636 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQNQASWTLEE 695
Query: 578 I 578
+
Sbjct: 696 L 696
Score = 43 (20.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 221 HYLHSSSEPKLVEKVQHELLVVYATE 246
H LHS E VE +Q++L ATE
Sbjct: 80 HGLHSVLEEWFVEVLQNDLQGNIATE 105
>UNIPROTKB|F1PYP1 [details] [associations]
symbol:TMEM210 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 OMA:MLRGVLF
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00390000008939 EMBL:AAEX03006734
Ensembl:ENSCAFT00000030976 Uniprot:F1PYP1
Length = 885
Score = 175 (66.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 497 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 556
Query: 459 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
+ D+ +R N EE P + +L++ FWP +K L +P ++ + +E
Sbjct: 557 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIREALE 616
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 577
V+ YE R L+W ++LG ++ + + + + V+ QA LL F + E
Sbjct: 617 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQATWTLEE 676
Query: 578 I 578
+
Sbjct: 677 L 677
Score = 38 (18.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 221 HYLHSSSEPKLVEKVQHEL 239
H LHS E VE +Q++L
Sbjct: 61 HGLHSVLEEWFVEVLQNDL 79
>DICTYBASE|DDB_G0276377 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016567 "protein ubiquitination" evidence=IEA;IC] [GO:0005829
"cytosol" evidence=ISS] [GO:0005680 "anaphase-promoting complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
UniPathway:UPA00143 dictyBase:DDB_G0276377 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 EMBL:AAFI02000014
GenomeReviews:CM000151_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:XP_643183.1 ProteinModelPortal:Q551S9
STRING:Q551S9 EnsemblProtists:DDB0234264 GeneID:8620454
KEGG:ddi:DDB_G0276377 OMA:NFIVISE ProtClustDB:CLSZ2729163
Uniprot:Q551S9
Length = 907
Score = 164 (62.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 67/287 (23%), Positives = 123/287 (42%)
Query: 384 GNEKLSDEAIEETLEKVVKLLAYISDK-DLFAEFYRKKLARRLLFDRSANDDHERSILTK 442
GN K ++ ++ + + L I D DLF YR L+ RLL + D E +
Sbjct: 545 GNAKANNNNKKKKKKDTISHLVNIYDGIDLFINEYRSMLSDRLLSVVDFDLDKEIKNIEL 604
Query: 443 LKQQCGGQFTSKMEGMVTD------LTLARENQTSFEEYLSNNQNAHPGI-DLSVTVLTT 495
LK + G E M+ D L L +N +NN N + + + +L+
Sbjct: 605 LKLRFGDSVLFNCEIMIKDMVDSKRLNLQIKNSQGVNNNNNNNNNNNNELKEFETLILSQ 664
Query: 496 GFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELI 555
FWP+ K + P + K ++++ YE R+L W LG +++ + NI+
Sbjct: 665 LFWPTLKGDEFKYPKSIEKKMQIYSKEYERIKTPRQLIWKQHLGLVDLDLEIGN-NIQSF 723
Query: 556 -VSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLH-SLSCAKYKILLKEPNTKTI 613
VS A ++LF + D + + LT + L + L S K K++ N + I
Sbjct: 724 QVSPIHATLIMLFESDD----GDDDDEKELTLEYLSKQLEISKDLVKKKLIFWL-NNQII 778
Query: 614 SQSDH--FEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAID 658
++ H ++ N+K + ++ + + D+ + +D D D ++
Sbjct: 779 KETSHETYKINNKEKEEQKQRQQQIENDDQDESSSDDDDDDNNIVVE 825
>UNIPROTKB|Q9UJX6 [details] [associations]
symbol:ANAPC2 "Anaphase-promoting complex subunit 2"
species:9606 "Homo sapiens" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISS] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000079 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007067 GO:GO:0007094
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0051436
GO:GO:0045773 GO:GO:0004842 GO:GO:0005680 EMBL:AF191337
EMBL:AL929554 EMBL:BC032503 EMBL:BC001579 EMBL:BC009487
EMBL:AB037827 IPI:IPI00002549 IPI:IPI00375832 RefSeq:NP_037498.1
UniGene:Hs.533262 ProteinModelPortal:Q9UJX6 SMR:Q9UJX6
DIP:DIP-32957N IntAct:Q9UJX6 MINT:MINT-1196367 STRING:Q9UJX6
PhosphoSite:Q9UJX6 DMDM:37537863 PaxDb:Q9UJX6 PRIDE:Q9UJX6
DNASU:29882 Ensembl:ENST00000323927 GeneID:29882 KEGG:hsa:29882
UCSC:uc004clq.1 UCSC:uc004clr.1 CTD:29882 GeneCards:GC09M140069
HGNC:HGNC:19989 HPA:CAB018692 MIM:606946 neXtProt:NX_Q9UJX6
PharmGKB:PA134884359 eggNOG:COG5647 HOGENOM:HOG000033936
HOVERGEN:HBG045327 InParanoid:Q9UJX6 KO:K03349 OMA:MLRGVLF
OrthoDB:EOG4T1HM4 PhylomeDB:Q9UJX6 Reactome:REACT_8017
GenomeRNAi:29882 NextBio:52411 ArrayExpress:Q9UJX6 Bgee:Q9UJX6
CleanEx:HS_ANAPC2 CleanEx:HS_APC2 Genevestigator:Q9UJX6
GermOnline:ENSG00000176248 GO:GO:0031145 GO:GO:0008054
GO:GO:0090129 GO:GO:0031915 GO:GO:0051437 GO:GO:0070979
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
Uniprot:Q9UJX6
Length = 822
Score = 169 (64.5 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 50/179 (27%), Positives = 82/179 (45%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 501 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 560
Query: 459 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
+ D+ +R N EE P + +L++ FWP +K L +P ++ +E
Sbjct: 561 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALE 620
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 576
+ YE R L+W ++LG ++ + + + + V+ QA LL F D+ S++
Sbjct: 621 AYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQ--DQASWT 677
Score = 43 (20.2 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 670 VLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMF 718
+L Q S +E+LS+ K + +++RM + + L +E P F
Sbjct: 667 LLYFQDQASWTLEELSKAVKMPVALLRRRMSVWLQQGVLR--EEPPGTF 713
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 221 HYLHSSSEPKLVEKVQHEL 239
H LHS E VE +Q++L
Sbjct: 65 HGLHSVLEEWFVEVLQNDL 83
>UNIPROTKB|H7C399 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
EMBL:AC073052 EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3
ProteinModelPortal:H7C399 SMR:H7C399 Ensembl:ENST00000451538
Uniprot:H7C399
Length = 111
Score = 89 (36.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 679 ECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 722
E +QL F P IKKR+E LI R+YL R E+ ++ Y+A
Sbjct: 68 EVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 111
Score = 66 (28.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 538 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQL 582
+G + G +K+I L VST+Q L+LFN ++ ++ E+ QL
Sbjct: 31 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTF-EVTQQL 73
>TAIR|locus:2118111 [details] [associations]
symbol:AT4G12100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006511 GO:GO:0031461
EMBL:AL049638 EMBL:AL161533 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 EMBL:AY133688 IPI:IPI00544547 PIR:T06617
RefSeq:NP_192947.1 UniGene:At.33506 ProteinModelPortal:Q9SZ75
SMR:Q9SZ75 PaxDb:Q9SZ75 PRIDE:Q9SZ75 EnsemblPlants:AT4G12100.1
GeneID:826818 KEGG:ath:AT4G12100 TAIR:At4g12100 eggNOG:NOG327349
HOGENOM:HOG000153571 OMA:HECEPHI PhylomeDB:Q9SZ75
ProtClustDB:CLSN2915908 Genevestigator:Q9SZ75 Uniprot:Q9SZ75
Length = 434
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 72/317 (22%), Positives = 138/317 (43%)
Query: 2 DRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHD--YS 59
DR + L + WD ++ I K IL+ + + ++ +TTI+ + D S
Sbjct: 71 DRNKLYLAKAWDLLKPAI---KIILD---DDEYKKPGDVLCFTTIFRAVKRACLGDPRQS 124
Query: 60 QQLYDKYKQAFEEYISSMVLP---SLSEKHD-EYMLRELVKRWANHKVMVRWLSRFFHYL 115
+ +++ K E +I+ ++ + S D L + RW + K + +S Y
Sbjct: 125 ELVFNLVKHECEPHIAELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSLVSDVAMYQ 184
Query: 116 -----------DRYFIARRSL-PALNEVGLTCFREQIDKEREGEQIDRA--LLKNVLDIF 161
+ F + S+ P L + +T I ER G+ + LLKN++D+F
Sbjct: 185 TLNGLTLWDVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANNTSDLLKNLMDMF 244
Query: 162 VEIGMGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVS- 220
M +Y +++ L T +Y+ +A + Y+ E E ++
Sbjct: 245 ---RMQWQCTYV--YKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDK 299
Query: 221 HYLH-SSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPK 279
HY SSS +L++ ++ +LL +++ L E G L+ E ++DL RMYRL+ +
Sbjct: 300 HYFFFSSSRSRLMKVLKSQLLEAHSSFLEE----GFMLLMDESLIDDLRRMYRLFSMVDS 355
Query: 280 GLEPVANVFKQHITAEG 296
+ + + + +I A+G
Sbjct: 356 E-DYIDRILRAYILAKG 371
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 165 (63.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L+ I K+ YR LA +LL + D E + LK G + E M+ DL
Sbjct: 543 LVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDL 602
Query: 463 TLARENQTSFEEYLSNNQNAHPG---ID-LSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 518
++ T+ ++ +D L+ T+L+T FWP + L LP + K +
Sbjct: 603 IDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELPGPVDKLLSD 662
Query: 519 FKG-FYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 577
+ ++E KT RKL W +LG + +FE + ++ VS AA ++ F +Y +
Sbjct: 663 YANRYHEIKTP-RKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTYKD 721
Query: 578 IMTQLNLTHDDLVR 591
+ + + D L R
Sbjct: 722 LAEVIGIPIDALNR 735
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 230 KLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLS 268
K + KV +L + T + E + LL + KV DL+
Sbjct: 241 KNIGKVVRDLRSIGFTSMAENAYASAIFLLLKAKVHDLA 279
Score = 38 (18.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 386 EKLSDEAIEETLE 398
E LSD+AI+E E
Sbjct: 15 ETLSDDAIQEITE 27
>FB|FBgn0002791 [details] [associations]
symbol:mr "morula" species:7227 "Drosophila melanogaster"
[GO:0000090 "mitotic anaphase" evidence=NAS] [GO:0005680
"anaphase-promoting complex" evidence=NAS;TAS;IPI] [GO:0051726
"regulation of cell cycle" evidence=TAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045886 "negative
regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 EMBL:AE013599 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0045886 GO:GO:0006511
GO:GO:0005680 KO:K03349 OMA:MLRGVLF InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GeneTree:ENSGT00390000016127
GO:GO:0050804 FlyBase:FBgn0002791 EMBL:AY129297 EMBL:BT031326
RefSeq:NP_611862.1 UniGene:Dm.759 SMR:Q9W1E5 IntAct:Q9W1E5
MINT:MINT-292405 STRING:Q9W1E5 EnsemblMetazoa:FBtr0072156
GeneID:45906 KEGG:dme:Dmel_CG3060 UCSC:CG3060-RA InParanoid:Q9W1E5
GenomeRNAi:45906 NextBio:838467 Uniprot:Q9W1E5
Length = 802
Score = 162 (62.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 45/180 (25%), Positives = 78/180 (43%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ ++ I K+LF YR +A RLL N + E L LK + G E M
Sbjct: 486 IISMVVDIYGSKELFMTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHSCEVM 545
Query: 459 VTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 518
+ D+T ++ +N D+S +++ FWPS+ L LP E+ +
Sbjct: 546 LKDVTDSKRINAHIHSDGDRTENQL--FDISSLIVSAQFWPSFNKESLQLPEEIENEFKK 603
Query: 519 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 578
+ YE +R L W G+ NI + + +E++VS A + F T + + ++
Sbjct: 604 YTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIYHFQTKNEWTIEDL 663
Score = 42 (19.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 13 DYMQKGITKLKRILEGLPES-PFSSEEYMMLYTTIYNMCTQKPPHDYS 59
DY++K ++R++ GL E P E + TI C ++S
Sbjct: 410 DYLRKRNDTVRRVVTGLTEEGPTDLSEELAKGETIKE-CKDSGTDEFS 456
>ZFIN|ZDB-GENE-081104-256 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit
2" species:7955 "Danio rerio" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 ZFIN:ZDB-GENE-081104-256
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 CTD:29882
eggNOG:COG5647 HOGENOM:HOG000033936 HOVERGEN:HBG045327 KO:K03349
OrthoDB:EOG4T1HM4 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:CU468929 IPI:IPI00920305 RefSeq:NP_001243675.1
UniGene:Dr.105374 Ensembl:ENSDART00000133722 GeneID:100318335
KEGG:dre:100318335 Uniprot:B8JLK0
Length = 802
Score = 166 (63.5 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 53/195 (27%), Positives = 85/195 (43%)
Query: 400 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 458
++ LL I K++F Y+ LA RLL + N E + LK + G E M
Sbjct: 478 IISLLVSIYGSKEIFVNEYKTVLADRLLHQLNYNTAREIRNVELLKLRFGESHMHYCEVM 537
Query: 459 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
+ D+ +R N EE P + LS ++++ FWP K + LP+ K +E
Sbjct: 538 LKDVADSRRINSNIHEEERRLPAEEQPTLPLSAMIISSEFWPQLKEEKMELPAVASKAME 597
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNI-ELIVSTYQAATLLLFNTSDRLSYS 576
+ +E R L W LG ++ + E + I +L VS AA +L F +
Sbjct: 598 DYTHRFEKLKAMRTLRWKPQLGSVTLDLELEDRTITDLTVSPIHAAIILHFQDKGTWTLE 657
Query: 577 EIMTQLNLTHDDLVR 591
E+ L + + +VR
Sbjct: 658 ELSGVLGVPQE-MVR 671
Score = 40 (19.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 18/84 (21%), Positives = 34/84 (40%)
Query: 169 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDS-CPEYMIKAEECLKKER-DRVSHYLHSS 226
++ Y + F HM Q A + + + E C C +E ++ H
Sbjct: 157 LEFYSRTFSVHMSQAGEAVEAEEGAVDTDEGGLCSGCATLPHLCWCQEALQQLQELSHIL 216
Query: 227 SEPKLVEKVQHELLVVYATELLEK 250
S +L+E+V E + +L+E+
Sbjct: 217 SRLQLLERVSSEAVTSILHQLIEQ 240
Score = 38 (18.4 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 281 LEPVANVFKQHITAEGTVLVQQAEDAA--TNQGG 312
LE + F H++ G + +AE+ A T++GG
Sbjct: 157 LEFYSRTFSVHMSQAGEAV--EAEEGAVDTDEGG 188
Score = 37 (18.1 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 142 KEREGEQIDRALLKNVLDIFVEIGMGQMDSY 172
K+ EG+ +R K +LD F + + Q++ +
Sbjct: 77 KQPEGDSQERDRAKALLDAFRNL-LQQLEPF 106
>WB|WBGene00000143 [details] [associations]
symbol:apc-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 GO:GO:0009792 GO:GO:0007126 GO:GO:0006898
GO:GO:0051301 GO:GO:0007067 GO:GO:0040035 GO:GO:0040039
GO:GO:0006511 KO:K03349 InterPro:IPR014786 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:FO080533 PIR:S44845 PIR:S44846 RefSeq:NP_498762.2
ProteinModelPortal:P34514 SMR:P34514 IntAct:P34514
MINT:MINT-1054240 STRING:P34514 PaxDb:P34514 EnsemblMetazoa:K06H7.6
GeneID:176139 KEGG:cel:CELE_K06H7.6 UCSC:K06H7.6 CTD:176139
WormBase:K06H7.6 eggNOG:NOG306201 HOGENOM:HOG000022396
InParanoid:P34514 OMA:HEINAEL NextBio:891294 Uniprot:P34514
Length = 731
Score = 145 (56.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/187 (20%), Positives = 88/187 (47%)
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 463 TLARENQTSFEEYLSNNQNAH--PGIDLSVTVLTTGFWPSYKS--SDLNLPSEMVKCVEV 518
+ + FE+ + + P I +S ++++ +WP ++ ++ +P + ++V
Sbjct: 465 IHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMDV 524
Query: 519 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 578
++ Y + RKL W+ S+G ++ + ++ + A L LF + + +E+
Sbjct: 525 YQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAEV 584
Query: 579 MTQLNLT 585
+ ++ ++
Sbjct: 585 VEKMGMS 591
>UNIPROTKB|P34514 [details] [associations]
symbol:apc-2 "Anaphase-promoting complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 GO:GO:0009792
GO:GO:0007126 GO:GO:0006898 GO:GO:0051301 GO:GO:0007067
GO:GO:0040035 GO:GO:0040039 GO:GO:0006511 KO:K03349
InterPro:IPR014786 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:FO080533 PIR:S44845
PIR:S44846 RefSeq:NP_498762.2 ProteinModelPortal:P34514 SMR:P34514
IntAct:P34514 MINT:MINT-1054240 STRING:P34514 PaxDb:P34514
EnsemblMetazoa:K06H7.6 GeneID:176139 KEGG:cel:CELE_K06H7.6
UCSC:K06H7.6 CTD:176139 WormBase:K06H7.6 eggNOG:NOG306201
HOGENOM:HOG000022396 InParanoid:P34514 OMA:HEINAEL NextBio:891294
Uniprot:P34514
Length = 731
Score = 145 (56.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/187 (20%), Positives = 88/187 (47%)
Query: 403 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 462
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 463 TLARENQTSFEEYLSNNQNAH--PGIDLSVTVLTTGFWPSYKS--SDLNLPSEMVKCVEV 518
+ + FE+ + + P I +S ++++ +WP ++ ++ +P + ++V
Sbjct: 465 IHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMDV 524
Query: 519 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 578
++ Y + RKL W+ S+G ++ + ++ + A L LF + + +E+
Sbjct: 525 YQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAEV 584
Query: 579 MTQLNLT 585
+ ++ ++
Sbjct: 585 VEKMGMS 591
>POMBASE|SPBP23A10.04 [details] [associations]
symbol:apc2 "anaphase-promoting complex cullin family
subunit Apc2" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0008054 "cyclin catabolic process"
evidence=IC] [GO:0016567 "protein ubiquitination" evidence=IC]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IC] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IC] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 PomBase:SPBP23A10.04 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 GO:GO:0030071 EMBL:CU329671
Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145 GO:GO:0008054
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:NP_001018806.1 ProteinModelPortal:Q874R3
IntAct:Q874R3 STRING:Q874R3 EnsemblFungi:SPBP23A10.04.1
GeneID:3361204 KEGG:spo:SPBP23A10.04 OMA:SHWANFR OrthoDB:EOG4XPTQ5
NextBio:20811314 Uniprot:Q874R3
Length = 681
Score = 121 (47.7 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 42/176 (23%), Positives = 77/176 (43%)
Query: 400 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMV 459
V L++ K+ + + LA RLL + + E + LK + G M+
Sbjct: 376 VGSLISIFKSKEPLVKELQLLLADRLLQLTDYHYEVEAKNIEFLKYRFGETVLQMCSVML 435
Query: 460 TDLTLAR--ENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 517
D+ +R + E Y+S L VT+L+ FWP+ +LP + K ++
Sbjct: 436 NDIENSRFIDQSIHMENYVSKG--------LHVTILSRLFWPTLSVRYFHLPGPLKKELD 487
Query: 518 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRL 573
+ Y + + R+L ++ +LG + + E + + L V+ QAA + LF + L
Sbjct: 488 AYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPEQAAFISLFEETSTL 543
Score = 57 (25.1 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 19 ITKLKRILEGLPESPFSSEEYMMLYTTIY---------NMCTQKPPHDYSQQLYDKYKQA 69
I +L + +G P F + + YTTI N+C+ HD + QL D +
Sbjct: 16 IDQLSSVTQGTPVLDFIDKLRIHFYTTIRQNLLKIDLKNICSL---HDLTDQLSD-FWLV 71
Query: 70 FEEYISSMVLPSLSEKHDEYM--LRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPA 127
+E+ S + P LS + D + R L +R+ V+ L+ + + + ++ ++ P
Sbjct: 72 YEQ--SVLESPILSPELDRILTCFRCLCRRYLPISVIESVLTEYLDQVLKVWLESKTNPC 129
Query: 128 LN 129
L+
Sbjct: 130 LD 131
>UNIPROTKB|H7C1L6 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC073052
EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3 Ensembl:ENST00000436172
Uniprot:H7C1L6
Length = 192
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 32/140 (22%), Positives = 65/140 (46%)
Query: 1 MDRKTIDLDQGWDYMQKGITKLKRILEGLPESPFSSEEYMMLYTTIYNMCTQKPPHDYSQ 60
MD K ++ WD ++ I +++R S S EE LY Y M H + +
Sbjct: 46 MDEKYVN--SIWDLLKNAIQEIQR----KNNSGLSFEE---LYRNAYTMVL----HKHGE 92
Query: 61 QLYDKYKQAFEEYISSMVLPSLSEKHDEYMLRELVKRWANHKVMVRWLSRFFHYLDRYFI 120
+LY ++ E++ + V + + L+ L + W +H+ + + Y+DR ++
Sbjct: 93 KLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYV 152
Query: 121 ARRSLPALNEVGLTCFREQI 140
+ ++ + +GL FR+Q+
Sbjct: 153 QQNNVENVYNLGLIIFRDQV 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 722 722 0.00085 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 124
No. of states in DFA: 619 (66 KB)
Total size of DFA: 381 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 72.03u 0.08s 72.11t Elapsed: 00:00:23
Total cpu time: 72.11u 0.09s 72.20t Elapsed: 00:00:25
Start: Fri May 10 17:01:26 2013 End: Fri May 10 17:01:51 2013
WARNINGS ISSUED: 1