BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004946
(722 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38854|DXS_ARATH 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
OS=Arabidopsis thaliana GN=DXS PE=1 SV=2
Length = 717
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/684 (59%), Positives = 513/684 (75%), Gaps = 18/684 (2%)
Query: 45 LCPSSSSITSSKLVTVSRICA-LPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLA 103
L P+++S ++ + +++CA L + +++ ++ PTP+LD + P+ +K+L++KELKQL+
Sbjct: 43 LKPNNNSHSNRR----AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLS 98
Query: 104 VEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRR 163
E+RS++ VSKT L SSL VELTVALH++F+ P DKILWDVG Q+Y HKILTGRR
Sbjct: 99 DELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRR 158
Query: 164 SLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISN 223
+ T+R+ +G+SG+T R ESE+D F GH ++SAGLGMAV RD+KGK +V VI +
Sbjct: 159 GKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGD 218
Query: 224 GTTMAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSK 282
G AGQAYEAM+NAGYLDS+MIVILND++ SL + P + ALSS LSR+QS+
Sbjct: 219 GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNP 278
Query: 283 SFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIE 342
+ R+LREVAKGMTK+IG MH+ AAKVDEYARGMI GS+LFEELGLYYIGPVDGHNI+
Sbjct: 279 ALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNID 338
Query: 343 DLISVLQEVASLGSMGPVLVHVVTEENR------RAEDTQKSEAIEKQQEGASDSNSLPF 396
DL+++L+EV S + GPVL+HVVTE+ R RA+D K + K +
Sbjct: 339 DLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADD--KYHGVVKFDP--ATGRQFKT 394
Query: 397 GNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAV 456
N +++Y F EALV EAE DKD+V +HA M L LFQ +FP R FDVG+AEQHAV
Sbjct: 395 TNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAV 454
Query: 457 TFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGA 516
TF+AGLAC GLKPFC I S+F+QRAYDQVV+DVD Q+LPVRF + AGLVG+DGPT CGA
Sbjct: 455 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGA 514
Query: 517 FDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIP 575
FD+TFM+CLPNMIVMAPSDE +L +MVAT +IDDRP CFRYPRG + L PG +G+P
Sbjct: 515 FDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVP 574
Query: 576 IEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRE 635
I EIGKG++L EG+ VALLGYG+ VQ+CL A +L + G++VTVADARFCKPLD L+R
Sbjct: 575 I-EIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRS 633
Query: 636 LCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLAL 695
L ++H LITVEEGSIGGFGSHV F+ALDGLLD +KWRP+VLPD YI+H +P QLA
Sbjct: 634 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAE 693
Query: 696 AGLTGHHIAATALSLLGRTREALL 719
AGL HIAATAL+L+G REAL
Sbjct: 694 AGLMPSHIAATALNLIGAPREALF 717
>sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
OS=Capsicum annuum GN=TKT2 PE=2 SV=1
Length = 719
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/671 (60%), Positives = 504/671 (75%), Gaps = 23/671 (3%)
Query: 64 CALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
+L + +++ + PTPI+D + P+ +K+L++KELKQLA E+RS+ VSKT L S
Sbjct: 58 ASLSESGEYYTQRPPTPIVDTINYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGS 117
Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
SL VELTVALH+VF+AP D+ILWDVG Q+Y HKILTGRR + TLR+ +G++G+T RSE
Sbjct: 118 SLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSE 177
Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
SEYD F GH ++SAGLGMAV RD+KG+ ++ VI +G AGQAYEAM+NAGYLDS
Sbjct: 178 SEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDS 237
Query: 244 NMIVILNDSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGM 302
+MIVILND+R SL + P + ALSS LSR+QS++ R+LREVAKG+TK+IG M
Sbjct: 238 DMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 297
Query: 303 HEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLV 362
HE AAKVDEYARGMI GSTLFEELGLYYIGPVDGHNI+DLIS+L+EV S + GPVL+
Sbjct: 298 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLI 357
Query: 363 HVVTEENR------RAED-----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEAL 411
HVVTE+ R RA D + A KQ +G++ + S Y F EAL
Sbjct: 358 HVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAKTQS---------YTTYFAEAL 408
Query: 412 VMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFC 471
+ EAE DKDIV +HA M + LF +FP R FDVG+AEQHAVTF+AGLAC GLKPFC
Sbjct: 409 IAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 468
Query: 472 IIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVM 531
I S+F+QRAYDQVV+DVD Q+LPVRF + AGLVG+DGPT CGAFD+TFM+CLPNM+VM
Sbjct: 469 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVM 528
Query: 532 APSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLP-GYRGIPIEEIGKGKVLVEGKD 590
APSDE EL +VAT A+IDDRP CFRYPRG + +LP G +GIP+ E+GKG++LVEG+
Sbjct: 529 APSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPL-EVGKGRILVEGER 587
Query: 591 VALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS 650
VALLGYG+ VQNCL A ++L G+ VTVADARFCKPLD L+R L ++H L+TVE+GS
Sbjct: 588 VALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGS 647
Query: 651 IGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSL 710
IGGFGSHV F+ALDGLLD +KWRPIVLPD YI+H SP QLA AGLT HIAAT ++
Sbjct: 648 IGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNI 707
Query: 711 LGRTREALLLM 721
LG+TREAL +M
Sbjct: 708 LGQTREALEVM 718
>sp|O22567|DXS1_ORYSJ 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=CLA1 PE=2 SV=2
Length = 720
Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/659 (60%), Positives = 490/659 (74%), Gaps = 13/659 (1%)
Query: 71 DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
++ + PTP+LD V P+ +K+L++KEL+QLA E+RS++ VSKT L SSL VEL
Sbjct: 62 EYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVVEL 121
Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
TVALH+VF+ P DKILWDVG Q+Y HKILTGRR + T+R+ +G+SG+T RSESEYD F
Sbjct: 122 TVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDSFG 181
Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
GH ++SA LGMAV RD+KG + +V VI +G AGQAYEAM+NAGYLDS+MIVILN
Sbjct: 182 TGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 241
Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
D++ SL + P + ALSS LS++QSS+ R+LREVAKG+TK+IG +HE AAKV
Sbjct: 242 DNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAAKV 301
Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
DEYARGMI GSTLFEELGLYYIGPVDGHNI+DLI++L+EV S + GPVL+HVVTE+
Sbjct: 302 DEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKG 361
Query: 370 R------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVV 423
R RA D K + K P S Y + F EAL+ EAE+D +V
Sbjct: 362 RGYPYAERAAD--KYHGVAKFDPATGKQFKSPAKTLS--YTNYFAEALIAEAEQDNRVVA 417
Query: 424 VHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYD 483
+HA M L F +FP R FDVG+AEQHAVTF+AGLAC GLKPFC I S+FLQR YD
Sbjct: 418 IHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYD 477
Query: 484 QVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMV 543
QVV+DVD Q+LPVRF + AGLVG+DGPT CGAFD+T+M+CLPNM+VMAPSDE EL MV
Sbjct: 478 QVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMV 537
Query: 544 ATVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQN 602
AT A+IDDRP CFRYPRG + L P Y+G+P+ E+GKG+VL+EG+ VALLGYG+ VQ
Sbjct: 538 ATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPL-EVGKGRVLLEGERVALLGYGSAVQY 596
Query: 603 CLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFI 662
CL A +L+ + G+ VTVADARFCKPLD L+R L +H L+TVEEGSIGGFGSHV+ F+
Sbjct: 597 CLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFM 656
Query: 663 ALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 721
ALDGLLD +KWRP+VLPD YI+H SP QLA AGLT HIAAT ++LG+ REAL +M
Sbjct: 657 ALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIM 715
>sp|Q6YU51|DXS2_ORYSJ Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2
SV=1
Length = 713
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/657 (57%), Positives = 472/657 (71%), Gaps = 11/657 (1%)
Query: 71 DFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVEL 130
D+ +K TP+LD V P+ +K+L+ EL+QLA E+R+E+ VSKT L SSL VEL
Sbjct: 60 DYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVEL 119
Query: 131 TVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFN 190
VALHHVF P DKI+WDVG Q Y HKILTGRRS +HT+R+ G++G+ R ES +D F
Sbjct: 120 AVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFG 179
Query: 191 AGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
AGH S+SA LGMAVARD+ GK+ +++VI +G AGQAYEAM+N+GYLDSNMIV+LN
Sbjct: 180 AGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLN 239
Query: 251 DSRH-SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKV 309
D++ SL + P T + ALS L+++QSS R+LRE AK +TK+IG HE AAKV
Sbjct: 240 DNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKV 299
Query: 310 DEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEEN 369
DEYARGM+ GSTLFEELGLYYIGPVDGH+++DL+++ +V S+ + GPVLVH+VTE+
Sbjct: 300 DEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKG 359
Query: 370 RRAEDTQKSEAIEKQQEGA---SDSNSLPFGNYSRT--YDDCFIEALVMEAEKDKDIVVV 424
+ +EA + G + F + T Y F EAL+ EAE D +V +
Sbjct: 360 K---GYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGI 416
Query: 425 HAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQ 484
HA M L F ++FPER FDVG+AEQHAVTF+AGLA GLKPFC I S+FLQR YDQ
Sbjct: 417 HAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 476
Query: 485 VVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVA 544
VV+DVD QRLPVRF + AGLVG+DGPT CGAFD+ +M+CLPNM+VMAP+DE EL+ MVA
Sbjct: 477 VVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVA 536
Query: 545 TVASIDDRPVCFRYPRGAIVRTDL-PGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNC 603
T A+IDDRP CFR+PRG + L P ++G P+ E+GKG+VLV G VALLGYG MVQ C
Sbjct: 537 TAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPL-EVGKGRVLVGGNRVALLGYGTMVQAC 595
Query: 604 LKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIA 663
+KA L + GI VTVADARFCKPLD L+REL H L+TVEEGSIGGFGSHV+H+++
Sbjct: 596 MKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLS 655
Query: 664 LDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 720
L GLLD +K R + LPD YI+H +P QL AGLT HIAAT LSLLGR EAL L
Sbjct: 656 LSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLLGRPLEALQL 712
>sp|B6IRB5|DXS_RHOCS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum
(strain ATCC 51521 / SW) GN=dxs PE=3 SV=1
Length = 642
Score = 612 bits (1577), Expect = e-174, Method: Compositional matrix adjust.
Identities = 318/640 (49%), Positives = 420/640 (65%), Gaps = 22/640 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P L+ L +L+Q A E+R+E + VS T L + L VELTVALH+VF
Sbjct: 7 TPLLDTVNTPEDLRKLDPSQLRQFADELRTETINAVSVTGGHLGAGLGVVELTVALHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ESEYDPF AGH S+
Sbjct: 67 NTPADRLIWDVGHQCYPHKILTGRRDRIRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SA LGMAV RD G + ++ VI +G+ AG AYEAM+NAG ++S MIVILND+ S+ P
Sbjct: 127 SAALGMAVGRDQLGHKNHVICVIGDGSISAGMAYEAMNNAGAMNSRMIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S LSR+ SS+ +R LRE+ K + +R+ R + E A + +EYARG +
Sbjct: 187 --------PVGAMSGYLSRLISSRQYRGLRELGKQVAERLPRPLQEAARRAEEYARGFV- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEE+G YY+GP+DGHN++ L+ VL+ + GPVL+H VT++ R ++S
Sbjct: 238 -TGGTLFEEMGFYYVGPIDGHNLDHLLPVLENIRDDQGTGPVLIHAVTQKGRGYGPAERS 296
Query: 379 ----EAIEKQQ--EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
A+ K GA +Y+R F ++L+ EAE D +V + A M
Sbjct: 297 ADKLHAVSKFDVITGAQAKAKANAPSYTR----VFADSLIQEAEADSRVVAITAAMPSGT 352
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF+++FP+R +DVG+AEQHAVTF+AGLA GLKPFC I S FLQRAYDQVV+DV Q
Sbjct: 353 GLDLFEKRFPDRTYDVGIAEQHAVTFAAGLAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQ 412
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVGSDG T G+FD+ ++ C+PN+++MA +DE EL MVAT A+ D
Sbjct: 413 NLPVRFAIDRAGLVGSDGCTHAGSFDVAYLGCVPNIVIMAAADEAELKHMVATAAAYDHG 472
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ RYPRG V ++P RG + EIGKG+++ EG VA+L G ++ L A L+
Sbjct: 473 PIAVRYPRGEGVGLEMP-ERG-QVLEIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNA 530
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KP+D L+R L Q+H LITVEEGSIGGFGS+V HF+A GLLD G+
Sbjct: 531 RGLSTTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGL 590
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 712
K RP+VLPD + + +P +Q AGL HI TAL LG
Sbjct: 591 KVRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630
>sp|Q985Y3|DXS_RHILO 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti (strain
MAFF303099) GN=dxs PE=3 SV=1
Length = 637
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 324/644 (50%), Positives = 414/644 (64%), Gaps = 21/644 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P L++L EL QLA E+R EL VS+T L + L VELTVALH+VF
Sbjct: 7 TPLLDKVRIPADLRALDESELPQLASELRLELVDAVSRTGGHLGAGLGVVELTVALHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+++WDVG Q Y HKILTGRR I TLR++ G+SG+T R+ESEYDPF A H S+
Sbjct: 67 NTPDDRLIWDVGHQAYPHKILTGRRDRIRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMA ARD+ G R ++ VI +G AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 127 SAGLGMAAARDLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S K++ LR+ K +T +G+ + E+ARG +
Sbjct: 187 P--------TGAMSAYLARLASGKAYAGLRDFGKKLTSYLGKRADRAITRAVEHARGYV- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG Y+IGP+DGHN+E LI VL+ V G GPVL+HVVT++ + +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDNGE-GPVLIHVVTQKGK---GYAPA 292
Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
EA + G + + + + Y F E+L+ EA +D IV V A M
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLIREAREDDRIVAVTAAMPSGTG 352
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L LF E FP R FDVG+AEQHAVTF+AGLA G KPF I S FLQRAYDQVV+DV Q+
Sbjct: 353 LDLFGEVFPSRTFDVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQK 412
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AG VG+DG T CGAFD TF++ LP +VMA +DE EL MV T A+ DD P
Sbjct: 413 LPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAAAYDDGP 472
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
+ FRYPRG V D+P RG + E+GKG+V+ EG VALL +G +Q+CL A L
Sbjct: 473 IAFRYPRGNGVGVDMP-ERG-EVLELGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAA 530
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ TVADARF KPLD L+R L ++H L+TVEEG+IGGF SHV F+A +GLL+SG+K
Sbjct: 531 GLSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLK 590
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
RP+VLPD + +HA P + A AGL I T + L T A
Sbjct: 591 VRPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634
>sp|Q11KE0|DXS_MESSB 1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp.
(strain BNC1) GN=dxs PE=3 SV=1
Length = 650
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/646 (48%), Positives = 425/646 (65%), Gaps = 25/646 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+L+ V P LK + ++L QLA E+R+E+ VS+T L + L VELTVALH++F
Sbjct: 20 TPLLNRVRFPSDLKQIPEEDLPQLAEELRAEMIDAVSQTGGHLGAGLGVVELTVALHYIF 79
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR++DG+SG+T RSESEYDPF A H S+
Sbjct: 80 DTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRQEDGLSGFTKRSESEYDPFGAAHSSTSI 139
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVAR++ G + ++ VI +G AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 140 SAGLGMAVARELSGGQRHVIAVIGDGALSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 199
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +R+V K +T +G+ + E+ARG +
Sbjct: 200 --------PTGAMSTYLARLASGRAYRGIRDVGKKLTSHLGKSFDRAITRAVEHARGFV- 250
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEE+G ++IGP+DGH++E L+ VL+ V G+ GPVL+HVVT++ + +
Sbjct: 251 -TGGTLFEEMGFFHIGPIDGHDLEALVPVLRNVRDNGT-GPVLIHVVTQKGK---GYPPA 305
Query: 379 EAIEKQQEGASDSNSL-------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
EA + G + + + P G + +Y F +ALV EA +DK IV + A M
Sbjct: 306 EAAADKYHGVAKFDVITGAQAKSPAG--APSYTKVFAQALVQEAREDKRIVAITAAMPSG 363
Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
L LF+++FP+R FDVG+AEQHAVTF+AGLA G +PF I S FLQRAYDQVV+DV
Sbjct: 364 TGLDLFEKEFPDRSFDVGIAEQHAVTFAAGLATEGYRPFAAIYSTFLQRAYDQVVHDVAI 423
Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
Q LPVRF I AG VG+DG T CGAFD+ +++ LPNM+VMA +DE EL MV T A D+
Sbjct: 424 QNLPVRFAIDRAGFVGADGATHCGAFDVAYLATLPNMVVMAAADEAELKHMVRTAADHDE 483
Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 611
P+ FRYPRG LP RG I +IGKG+++ EG +ALL G + +C+ A L
Sbjct: 484 GPIAFRYPRGEGTGVPLP-QRG-EILKIGKGRIVREGSKIALLSLGTRLADCMIAAEELE 541
Query: 612 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 671
G+ TVADARF KPLD L+R L + H L+TVEEGSIGGFG+HV HF+A +GLL++G
Sbjct: 542 AAGLSTTVADARFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENG 601
Query: 672 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
+K RP+V+PD +++ A P + A AGL I T + LG+ +A
Sbjct: 602 LKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647
>sp|B0CKC0|DXS_BRUSI 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1
Length = 643
Score = 604 bits (1557), Expect = e-172, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 411/641 (64%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+
Sbjct: 529 TGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|Q89RW1|DXS_BRAJA 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=dxs PE=3 SV=1
Length = 661
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 308/641 (48%), Positives = 419/641 (65%), Gaps = 21/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L I++++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 26 TPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 85
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T RSES+YDPF A H S+
Sbjct: 86 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSI 145
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G + ++ VI +G AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 146 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 205
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S+ LSR+ S K++R LRE AK + KR+ + + A +V+EY+RG +
Sbjct: 206 --------PVGAMSAYLSRLYSGKTYRTLREAAKQINKRLPKIIANRANRVEEYSRGFM- 256
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
G TLFEELG YY+GP+DGHN++ L+ VL+ V + GP+LVHVVT++ + A
Sbjct: 257 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-EEGPILVHVVTQKGKGYGPAEAS 315
Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
+ ++ + + + P + Y + F ++LV EA+KD+ IV + A M
Sbjct: 316 ADKYHAVVKFDVATGTQAKAKP---NAPAYQNVFGQSLVKEAQKDEKIVAITAAMPSGTG 372
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
+ +F + FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQ+V+DV Q
Sbjct: 373 VDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQIVHDVAIQN 432
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AGLVG+DG T G+FD ++ CLPNM++MA +DE ELV MVAT +IDDRP
Sbjct: 433 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRP 492
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
RYPRG ++P GIP+ EIGKG+++ +G +ALL +G + C KA L+
Sbjct: 493 SSLRYPRGEGRGIEMPEV-GIPL-EIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAH 550
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG-V 672
G+ T+ADARF KPLD +LV +L ++H LIT+EEGS+GGFGSHV+ F+ G LDSG V
Sbjct: 551 GLSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMV 610
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K+R +VLPD + +H +P A AGL I A LG+
Sbjct: 611 KFRTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651
>sp|A6WWC4|DXS_OCHA4 1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3
SV=1
Length = 638
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 407/641 (63%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P L++L +L QLA E+R+EL +VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPIPEALRALPESDLPQLAQELRAELIDVVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 DTPHDRIIWDVGHQAYPHKILTGRRDRIRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA D+ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASDLSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S K++R +RE AK + K++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGKTYRSVREAAKQVAKKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ +L+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPILKNVRDT-QEGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGA------SDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + S P N + +Y F +L+ EA D IV + A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQSKPPAN-APSYTKIFGTSLIEEARHDDRIVAITAAMPSGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEVFPQRTFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-QLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGF SHV F+A DGLLD G+
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I + LGR
Sbjct: 589 KVRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALGR 629
>sp|Q21A74|DXS_RHOPB 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain BisB18) GN=dxs PE=3 SV=1
Length = 641
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 309/639 (48%), Positives = 418/639 (65%), Gaps = 18/639 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L I +++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 7 TPLLDTIRTPADLRKLRIDQVRQVADELRQETIEAVSVTGGHFGAGLGVVELTTAIHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES+YDPF A H S+
Sbjct: 67 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G + ++ VI +G+ AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 127 SAGLGMAVARDLAGGKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
+ A+S+ LSR+ S K++R LRE K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
G G TLFEELG YY+GPVDGHN++ L+ +LQ V GP L+HVVT++ + AE
Sbjct: 239 G--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEA 295
Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
+ + A+ + + N + +Y + F ++LV EA+KD IV + A M +
Sbjct: 296 ASDKYHAVVKFDIATGAQAKAKSN-APSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGI 354
Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
+F++ FP R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q L
Sbjct: 355 DIFEKAFPTRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSL 414
Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
PVRF I AGLVG+DG T G+FD F+ CLPNM++MA SDE ELV MVAT +I+DRP
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAINDRPS 474
Query: 555 CFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 614
RYPRG ++P GI + EIGKG+++ EG +ALL +G + C KA L+ LG
Sbjct: 475 AVRYPRGEGRGVEMPEV-GIAL-EIGKGRIVREGNKIALLSFGTRLAECEKAADELATLG 532
Query: 615 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 674
+ T+ADARF KPLD++LV +L ++H L+T+EEGSIGGFGSHV +A G+LD V+
Sbjct: 533 LSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRM 592
Query: 675 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
R +VLPD +++H +PT A AGL I LG+
Sbjct: 593 RSLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631
>sp|Q130G7|DXS_RHOPS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain BisB5) GN=dxs PE=3 SV=1
Length = 638
Score = 597 bits (1540), Expect = e-170, Method: Compositional matrix adjust.
Identities = 311/643 (48%), Positives = 416/643 (64%), Gaps = 18/643 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L + +++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 4 TPLLDTIRTPEDLRKLRVDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 63
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES+YDPF A H S+
Sbjct: 64 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSI 123
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G ++ VI +G+ AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 124 SAGLGMAVARDLAGGNNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 183
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
+ A+S+ LSR+ S K++R LRE K + K + + + + AA+ +EY+RG M+
Sbjct: 184 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 235
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
G G TLFEELG YY+GP+DGHN++ L+ +LQ V GP L+HVVT++ + AE
Sbjct: 236 G--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEA 292
Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
+ + A+ + + N + +Y + F ++LV EA KD IV + A M +
Sbjct: 293 ASDKYHAVVKFDIATGTQAKAKSN-APSYQNVFGQSLVKEAAKDDKIVGITAAMPSGTGI 351
Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
+F++ FP R FDVG+AEQHAVTF+AGLA G KPFC I S FLQRAYDQVV+DV Q L
Sbjct: 352 DIFEKAFPARTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQVVHDVALQSL 411
Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
PVRF I AGLVG+DG T G+FD ++ CLPNM++MA SDE ELV MVAT +I+DRP
Sbjct: 412 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPS 471
Query: 555 CFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 614
RYPRG ++P G+P+ EIGKG+V+ +G VALL +G + C KA L+ LG
Sbjct: 472 ALRYPRGEGRGVEMPDV-GVPL-EIGKGRVIRQGNKVALLSFGTRLAECEKAAEELAALG 529
Query: 615 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 674
+ TVADARF KPLD+ LV +L H LIT+EEGSIGGFG+HV +A G LD VK
Sbjct: 530 LSTTVADARFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDGEVKM 589
Query: 675 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
R +VLPD +++H +PT A AGL I LG+ +A
Sbjct: 590 RAMVLPDVFLDHDTPTAMYANAGLDAKAIVKKVFEALGKEHKA 632
>sp|B3QFY7|DXS_RHOPT 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain TIE-1) GN=dxs PE=3 SV=1
Length = 641
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/639 (48%), Positives = 422/639 (66%), Gaps = 18/639 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L I +++Q+A E+R E VS T + L VELT ALH+VF
Sbjct: 7 TPLLDTIRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES++DPF AGH S+
Sbjct: 67 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ GK+ ++ VI +G+ AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 127 SAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
+ A+S+ LSR+ S K++R LRE K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
G G TLFEELG YY+GPVDGHN++ L+ +LQ V GP L+HVVT++ + AE
Sbjct: 239 G--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEA 295
Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
+ + A+ + + N + +Y + F ++LV EA+KD IV + A M +
Sbjct: 296 AADKYHAVVKFDIATGAQAKAKSN-APSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGI 354
Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
+F++ FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQRAYDQ+V+DV Q+L
Sbjct: 355 DIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKL 414
Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
PVRF I AGLVG+DG T G+FD ++ CLPNM++MA +DE ELV MVAT +IDDRP
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPS 474
Query: 555 CFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 614
RYPRG ++P GIP+ EIGKG+V+ +G VALL +G + KA L+ LG
Sbjct: 475 AVRYPRGEGRGVEMPEV-GIPL-EIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLG 532
Query: 615 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 674
+ TVADARF KPLD++LV +L ++H L+T+EEGSIGGFGSHV +A G+LD VK
Sbjct: 533 LSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKM 592
Query: 675 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
R +VLPD +++H +P A AGL I +LG+
Sbjct: 593 RALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
>sp|Q6NB76|DXS_RHOPA 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=dxs PE=3 SV=1
Length = 641
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/639 (48%), Positives = 422/639 (66%), Gaps = 18/639 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L I +++Q+A E+R E VS T + L VELT ALH+VF
Sbjct: 7 TPLLDTIRTPEDLRKLRIDQVRQVADELRLETIDAVSVTGGHFGAGLGVVELTTALHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES++DPF AGH S+
Sbjct: 67 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ GK+ ++ VI +G+ AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 127 SAGLGMAVASELAGKKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
+ A+S+ LSR+ S K++R LRE K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
G G TLFEELG YY+GPVDGHN++ L+ +LQ V GP L+HVVT++ + AE
Sbjct: 239 G--GGTLFEELGFYYVGPVDGHNLDHLLPILQNVRD-ADTGPFLIHVVTQKGKGYGPAEA 295
Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
+ + A+ + + N + +Y + F ++LV EA+KD IV + A M +
Sbjct: 296 AADKYHAVVKFDIATGAQAKAKSN-APSYQNVFGQSLVKEAQKDDKIVGITAAMPSGTGI 354
Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
+F++ FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQRAYDQ+V+DV Q+L
Sbjct: 355 DIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKL 414
Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
PVRF I AGLVG+DG T G+FD ++ CLPNM++MA +DE ELV MVAT +IDDRP
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPS 474
Query: 555 CFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 614
RYPRG ++P GIP+ EIGKG+V+ +G VALL +G + KA L+ LG
Sbjct: 475 AVRYPRGEGRGVEMPEV-GIPL-EIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLG 532
Query: 615 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 674
+ TVADARF KPLD++LV +L ++H L+T+EEGSIGGFGSHV +A G+LD VK
Sbjct: 533 LSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKM 592
Query: 675 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
R +VLPD +++H +P A AGL I +LG+
Sbjct: 593 RALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
>sp|A5VP09|DXS_BRUO2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1
Length = 643
Score = 595 bits (1534), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 411/641 (64%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKVPTPDRLRALPERDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TV DARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+
Sbjct: 529 AGLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|Q8YFM2|DXS_BRUME 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=dxs
PE=3 SV=1
Length = 643
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 410/641 (63%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGF 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|C0RHE3|DXS_BRUMB 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1
Length = 643
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 410/641 (63%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGF 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|Q8G292|DXS_BRUSU 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis biovar 1
(strain 1330) GN=dxs PE=3 SV=1
Length = 643
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 410/641 (63%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPANVP-SYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|A9M8W0|DXS_BRUC2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1
Length = 643
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 319/641 (49%), Positives = 410/641 (63%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPANVP-SYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGFGSHV F+A DGLLD G+
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R + LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|Q57ET1|DXS_BRUAB 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus biovar
1 (strain 9-941) GN=dxs PE=3 SV=1
Length = 643
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/641 (49%), Positives = 411/641 (64%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGF SHV F+A DGLLD G+
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R ++LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|B2S9T6|DXS_BRUA1 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain
S19) GN=dxs PE=3 SV=1
Length = 643
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/641 (49%), Positives = 411/641 (64%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGF SHV F+A DGLLD G+
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R ++LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|Q2YMF0|DXS_BRUA2 1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain
2308) GN=dxs PE=3 SV=1
Length = 643
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 318/641 (49%), Positives = 411/641 (64%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD P RL++L ++L QLA E+R+EL VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPYDRIIWDVGHQAYPHKILTGRRDRIRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ G++ ++ VI +G+ AG AYEAM+NAG LD+ +IVILND+ S+ P
Sbjct: 126 SAGLGMAVASELSGEKRNVIAVIGDGSMSAGMAYEAMNNAGALDARLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R +RE AK + +++ + + + A K +EYAR
Sbjct: 186 --------PTGAMSAYLARLVSGRTYRSVREAAKQVAQKLPKFLQDKARKSEEYARAFF- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GPVL+HVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDT-QKGPVLIHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + P N + +Y F +L+ EA D IV V A M
Sbjct: 292 EAAADKYHGVNKFDVITGKQAKPPAN-APSYTKIFGTSLIEEARHDDKIVAVTAAMPTGT 350
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQVV+DV Q
Sbjct: 351 GLDLFGEAFPKRVFDVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQ 410
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AGLVG+DGPT G+FD F++ LP +VMA SDE EL MV T A D+
Sbjct: 411 NLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEG 470
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V DLP RG + EIGKG+++ EG VALL +G +Q CL A L
Sbjct: 471 PISFRYPRGDGVGVDLP-ERG-SVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGA 528
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R L + H L+ VEEG++GGF SHV F+A DGLLD G+
Sbjct: 529 AGLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGL 588
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R ++LPD Y +H P A AGL I T + L R
Sbjct: 589 KVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
>sp|A4YQ36|DXS_BRASO 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp.
(strain ORS278) GN=dxs PE=3 SV=1
Length = 641
Score = 591 bits (1523), Expect = e-168, Method: Compositional matrix adjust.
Identities = 304/644 (47%), Positives = 420/644 (65%), Gaps = 20/644 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD ++ P L+ L +++++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 7 TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES+YDPF A H S+
Sbjct: 67 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRAESDYDPFGAAHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G + ++ VI +G AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S+ LSR+ S K++R LR+ AK + + + + + A++V+EY+RG +
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ-- 376
G TLFEELG YY+GP+DGHN++ L+ VL+ V + GP+LVHVVT++ + +
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYSPAEAA 296
Query: 377 --KSEAIEKQQ-EGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
K A+ K + + + P + Y + F ++LV EAEKD+ IV + A M
Sbjct: 297 ADKYHAVAKFDIATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDEKIVGITAAMPSGTG 353
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
+ +F + FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQ+V+DV Q
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQIVHDVCIQS 413
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AGLVG+DG T G+FD ++ CLPNM++MA SDE ELV MVAT +IDDRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRP 473
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
RYPRG ++P G+ + IGKG+++ +GK VALL +G + C KA L+
Sbjct: 474 SSVRYPRGEGRGVEMPEV-GVAL-PIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAH 531
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ ++ADARF KPLD +LV +L ++H LIT+EEGSIGGFGSHV ++A G+LD G+K
Sbjct: 532 GLSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLK 591
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
R +VLPD + +H +P A AGL I +LG+ A
Sbjct: 592 MRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGKDYAA 635
>sp|A5EEQ0|DXS_BRASB 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1
Length = 641
Score = 590 bits (1522), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/644 (46%), Positives = 417/644 (64%), Gaps = 20/644 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD ++ P L+ L +++++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 7 TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES+YDPF A H S+
Sbjct: 67 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G + ++ VI +G AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 127 SAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNSRLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S+ LSR+ S K++R LR+ AK + + + + + A++V+EY+RG +
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRTLRDAAKQLGQHLPKVIANRASRVEEYSRGFM- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-----RAE 373
G TLFEELG YY+GP+DGHN++ L+ VL+ V + GP+LVHVVT++ + A
Sbjct: 238 MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDM-ETGPILVHVVTQKGKGYPPAEAS 296
Query: 374 DTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
+ ++ + + + P + Y + F ++LV EAEKD +V + A M
Sbjct: 297 ADKYHAVVKFDVATGTQAKAKP---NAPAYQNVFGQSLVKEAEKDDKVVGITAAMPSGTG 353
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
+ +F + FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQ+V+DV Q
Sbjct: 354 IDIFAKAFPKRTFDVGIAEQHAVTFAAGLAAEGFKPFCAIYSTFLQRGYDQIVHDVCIQS 413
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AGLVG+DG T G+FD ++ CLPNM++MA SDE ELV MVAT +I+DRP
Sbjct: 414 LPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRP 473
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
RYPRG ++P G+P+ IGKG+++ +GK VALL +G + C KA L+
Sbjct: 474 SSVRYPRGEGRGVEMPEV-GVPL-PIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAH 531
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ ++ADARF KPLD +LV +L + H LIT+EEGSIGGFGSHV ++A G+LD G+K
Sbjct: 532 GLSASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLK 591
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
R +VLPD + +H +P A AGL I LG+ A
Sbjct: 592 MRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGKDYTA 635
>sp|Q2IRL7|DXS_RHOP2 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain HaA2) GN=dxs PE=3 SV=1
Length = 638
Score = 590 bits (1521), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/643 (47%), Positives = 413/643 (64%), Gaps = 18/643 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L I +++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 4 TPLLDTIRTPDDLRKLRIDQVQQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVF 63
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES+YDPF A H S+
Sbjct: 64 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSI 123
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G ++ VI +G+ AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 124 SAGLGMAVARDLAGGTNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 183
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
+ A+S+ LSR+ S K++R LRE K + K + + + + AA+ +EY+RG M+
Sbjct: 184 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 235
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR---AED 374
G G TLFEELG YY+GP+DGHN++ L+ +LQ V GP L+HVVT++ + AE
Sbjct: 236 G--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRD-AETGPFLIHVVTQKGKGYAPAEA 292
Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
+ + A+ + + N + +Y + F ++LV EA KD +V + A M +
Sbjct: 293 ASDKYHAVVKFDIATGTQAKAKSN-APSYQNVFGQSLVKEAAKDDKVVGITAAMPSGTGI 351
Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
+F++ FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQ+V+DV Q L
Sbjct: 352 DIFEKAFPDRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSL 411
Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
PVRF I AGLVG+DG T G+FD ++ CLPN ++MA SDE ELV MVAT +I+DRP
Sbjct: 412 PVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPS 471
Query: 555 CFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 614
RYPRG ++P G+P+ EIGKG+V+ +G VALL +G + C KA L+ LG
Sbjct: 472 AVRYPRGEGRGVEMPDV-GVPL-EIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLG 529
Query: 615 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKW 674
+ TVADARF KPLD+ LV +L H LIT+EEGSIGGFGSHV ++ G LD VK
Sbjct: 530 LSTTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKM 589
Query: 675 RPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
R +VLPD +++H +P A AGL I LG+ A
Sbjct: 590 RAMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632
>sp|Q3SUZ1|DXS_NITWN 1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1
Length = 666
Score = 588 bits (1517), Expect = e-167, Method: Compositional matrix adjust.
Identities = 306/658 (46%), Positives = 418/658 (63%), Gaps = 23/658 (3%)
Query: 62 RICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSL 121
R C + ++ D TP+LD + P L+ L +++++Q+A E+R E VS T
Sbjct: 16 RTCQIGNVA--VTDFSSTPLLDTIRTPADLRKLKVEQVRQVADELRLETIDAVSVTGGHF 73
Query: 122 KSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSR 181
+ L VELT A+H++F P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R
Sbjct: 74 GAGLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKR 133
Query: 182 SESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYL 241
+ES+YDPF A H S+SA LGMAVARD+ G ++ VI +G AG AYEAM+NAG +
Sbjct: 134 TESDYDPFGAAHSSTSISASLGMAVARDLSGGNNNVIAVIGDGAMSAGMAYEAMNNAGAM 193
Query: 242 DSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRG 301
+S +IVILND+ S+ P + A+S+ LSR+ S K++R LRE AK + K + +
Sbjct: 194 NSRLIVILNDNDMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKM 245
Query: 302 MHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVL 361
+ + A +V+EY+RG + G TLFEELG YY+GP+DGHN++ L+ VL+ V + + GP+L
Sbjct: 246 IADRAERVEEYSRGFMTNSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPIL 303
Query: 362 VHVVTEENR-----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAE 416
VHVVT++ + A + ++ + S S P + +Y + F +LV EAE
Sbjct: 304 VHVVTQKGKGYPPAEAAADKYHAVVKFDISTGAQSKSKP---NAPSYQNVFGASLVKEAE 360
Query: 417 KDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSA 476
KD IV + A M + +F FPER FDVG+AEQHAVTF+AGLA G KPFC I S
Sbjct: 361 KDDKIVAITAAMPSGTGVDIFNNAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCAIYST 420
Query: 477 FLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDE 536
FLQR YDQVV+DV Q LPVRF I AGLVG+DG T G+FD F+ CLPNM++MA +DE
Sbjct: 421 FLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADE 480
Query: 537 DELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGY 596
ELV MVAT +I+DRP RYPRG ++P G+P+ IGKG+++ +G +ALL +
Sbjct: 481 AELVHMVATQVAINDRPSAVRYPRGEGRGVEMPEV-GVPL-PIGKGRIVRQGSKIALLSF 538
Query: 597 GAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGS 656
G + C KA L+ G+ T+ADARF KPLD+ L +L + H LIT+EEGSIGGFGS
Sbjct: 539 GTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGS 598
Query: 657 HVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
HV + +G LD G V+ R ++LPD +++H +PT A AGL I A LG+
Sbjct: 599 HVMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656
>sp|Q07SR3|DXS_RHOP5 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas
palustris (strain BisA53) GN=dxs PE=3 SV=1
Length = 640
Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/647 (47%), Positives = 416/647 (64%), Gaps = 30/647 (4%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L I +++Q+A E+R E VS T + L VELT A+H+VF
Sbjct: 7 TPLLDTIRTPDDLRKLRIDQVQQVADELRLETIDAVSVTGGHFGAGLGVVELTTAIHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+ES++DPF AGH S+
Sbjct: 67 DTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA D+ G + ++ VI +G+ AG AYEAM+NAG ++S +IVILND+ S+ P
Sbjct: 127 SAGLGMAVASDLAGTKNNVIAVIGDGSISAGMAYEAMNNAGAMNSRLIVILNDNNMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG-MI 317
+ A+S+ LSR+ S K++R LRE K + K + + + + AA+ +EY+RG M+
Sbjct: 187 --------PVGAMSAYLSRLYSGKTYRSLREAGKQIGKHLPKLIADRAARAEEYSRGFMM 238
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQ- 376
G G TLFEELG YY+GP+DGHN++ L+ +LQ V GP L+HVVT++ + +
Sbjct: 239 G--GGTLFEELGFYYVGPIDGHNLDHLLPILQNVRD-ADAGPFLIHVVTQKGKGYAPAEA 295
Query: 377 ---KSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
K A+ K + + SN + +Y + F +LV EA+KD IV + A M
Sbjct: 296 AADKYHAVVKFDIATGTQAKTKSN-------APSYQNVFGASLVKEAQKDDKIVGITAAM 348
Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
+ +F++ FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FLQR YDQ+V+D
Sbjct: 349 PSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHD 408
Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
V Q LPVRF I AGLVG+DG T G+FD ++ CLPN ++MA SDE ELV MVAT +
Sbjct: 409 VAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVA 468
Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 608
I+D P RYPRG ++P GIP+ EIGKG+V+ +G +ALL +G + C KA
Sbjct: 469 INDAPSAVRYPRGEGRGVEMPEV-GIPL-EIGKGRVVRQGNKIALLSFGTRLAECEKAAD 526
Query: 609 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 668
L+ LG+ TVADARF KPLD++LV +L + H LITVEEGSIGGFGSHV +A G+L
Sbjct: 527 ELATLGLSTTVADARFMKPLDVELVLKLAREHEVLITVEEGSIGGFGSHVMQTLAEHGML 586
Query: 669 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 715
D V+ R +VLPD +++H +P A AGL I LG+ +
Sbjct: 587 DGEVRMRSLVLPDEFMDHDTPAVMYARAGLDAKGIVKKVFEALGKDK 633
>sp|Q1QQ40|DXS_NITHX 1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=dxs PE=3 SV=1
Length = 668
Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust.
Identities = 305/656 (46%), Positives = 419/656 (63%), Gaps = 24/656 (3%)
Query: 67 PDIDDF---FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKS 123
PD+ ++ D TP+LD + P L+ L +++L+Q+A E+R E VS T +
Sbjct: 18 PDMQNWNVAVTDFSKTPLLDTIRTPADLRKLRVEQLRQVADELRKETIDAVSVTGGHFGA 77
Query: 124 SLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSE 183
L VELT A+H++F P D+++WDVG Q Y HKILTGRR I TLR G+SG+T R+E
Sbjct: 78 GLGVVELTTAIHYIFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGGLSGFTKRTE 137
Query: 184 SEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDS 243
S+YDPF A H S+SA LGMAVARD+ G + ++ VI +G AG AYEAM+NAG ++S
Sbjct: 138 SDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEAMNNAGAMNS 197
Query: 244 NMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMH 303
+IVILND+ S+ P + A+S+ LSR+ S K++R LRE AK + K + + +
Sbjct: 198 RLIVILNDNDMSIAP--------PVGAMSAYLSRLYSGKTYRSLREAAKQLGKHLPKMIA 249
Query: 304 EWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVH 363
+ A +V+EY+RG + G TLFEELG YY+GP+DGHN++ L+ VL+ V + + GP+L+H
Sbjct: 250 DRAERVEEYSRGFMVNSG-TLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMEN-GPILLH 307
Query: 364 VVTEENR-----RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKD 418
VVT++ + A + ++ + S S P + Y + F ++LV EAEKD
Sbjct: 308 VVTQKGKGYGPAEAAADKYHAVVKFDVSTGAQSKSKP---NAPAYQNVFGQSLVKEAEKD 364
Query: 419 KDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFL 478
I+ + A M + +F + FP+R FDVG+AEQHAVTF+AGLA G KPFC I S FL
Sbjct: 365 DKIIAITAAMPSGTGVDIFNKAFPKRTFDVGIAEQHAVTFAAGLATEGFKPFCAIYSTFL 424
Query: 479 QRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDE 538
QR YDQ+V+DV Q LPVRF I AGLVG+DG T G+FD ++ CLPN ++MA SDE E
Sbjct: 425 QRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAE 484
Query: 539 LVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGA 598
LV MVAT +I+DRP RYPRG ++P G+P+ IGKG+++ +G VALL G
Sbjct: 485 LVHMVATQVAINDRPSAVRYPRGEGRGVEMPEV-GVPL-PIGKGRIVRQGSKVALLSLGT 542
Query: 599 MVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHV 658
+ C KA L+ G+ T+ADARF KPLD+ LV +L ++H LIT+EEGSIGGFGSHV
Sbjct: 543 RLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHV 602
Query: 659 SHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
+A G LDSG V+ R +VLPD +++H +P A GL I A LG+
Sbjct: 603 MQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
>sp|A8IBS1|DXS_AZOC5 1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans
(strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3
SV=1
Length = 641
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 308/640 (48%), Positives = 408/640 (63%), Gaps = 25/640 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V + ++ L ++L QLA E+R+E S VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDTVRDASDVRRLPEEKLSQLADELRAETISAVSVTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+++WDVG Q Y HKILTGRR I TLR+ G+SG+T RSESEYDPF A H S+
Sbjct: 66 NTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G ++ VI +G AG AYEAM+NAG +DS +IVILND+ S+ P
Sbjct: 126 SAGLGMAVARDLSGGDRNVIAVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++ LRE+ K + + + + + AAK +E+ARG
Sbjct: 186 P--------TGAMSAYLARLISGRTYLSLREIGKQLAGHLPKFVKDGAAKAEEFARGFW- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEE+G YY+GP+DGHN+E L+ VL+ V GP+LVHVVT++ + +
Sbjct: 237 -TGGTLFEEMGFYYVGPIDGHNLEHLLPVLKNVRD-AKTGPILVHVVTQKGK---GYPPA 291
Query: 379 EAIEKQQEGASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
EA + G + + + + +Y F E L+ EA +D +V + A M
Sbjct: 292 EASADKYHGVVKFDVVTGAQVKAKSNAPSYTRVFAETLIDEARRDDKVVAITAAMPSGTG 351
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L LF + FP+R FDVG+AEQHAVTF+AGLA G +PFC + S FLQR YDQVV+DV Q
Sbjct: 352 LDLFGQAFPQRTFDVGIAEQHAVTFAAGLAAEGYRPFCALYSTFLQRGYDQVVHDVALQG 411
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AGLVG+DG T GAFD+ ++CLP VMAP+DE EL M+AT D P
Sbjct: 412 LPVRFAIDRAGLVGADGATHAGAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGP 471
Query: 554 VCFRYPRGAIVRTDLP--GYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 611
+ FR+PRG V + P G R +P IGKG+V+ EG+D+A L G + CL LS
Sbjct: 472 IAFRFPRGEGVGVERPEKGER-LP---IGKGRVVREGQDIAFLSLGTRLAACLDVAERLS 527
Query: 612 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 671
LGI TVADARF KP+D +L+ L + H L+ VEEGS+GGFGS V F++ +GL+D G
Sbjct: 528 SLGISATVADARFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDGG 587
Query: 672 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 711
+K R + LPD YI+H +P QLA AGL I AL+L+
Sbjct: 588 LKVRALTLPDTYIDHDTPAAQLAEAGLDADGIYKRALALV 627
>sp|Q6G4D1|DXS_BARHE 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae
(strain ATCC 49882 / Houston 1) GN=dxs PE=3 SV=1
Length = 640
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/646 (48%), Positives = 412/646 (63%), Gaps = 32/646 (4%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P L++ +L +LA E+R+E +VS T L + L +ELTVALH+VF
Sbjct: 6 TPLLDRVCEPQDLRAFPESDLARLADELRAETIDVVSVTGGHLGAGLGVIELTVALHYVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR++ G+SG+T RSES YDPF AGH S+
Sbjct: 66 NTPEDRIIWDVGHQAYPHKILTGRREKIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125
Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
SAGLGMAVA +K KR IV VI +G AG AYEAM+NAG L++ +IV+LND+ S+
Sbjct: 126 SAGLGMAVASALKAEKRRNIVAVIGDGAMSAGMAYEAMNNAGALNARLIVVLNDNDMSIA 185
Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
P A+S+ L+R+ S ++R LRE K + +++ + + A + +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERVKVLGEKLPKFFLDKARRSEEFARGFL 237
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
G TLFEELG YY+GP+DGHN++ L+ VL+ V + GPVL+HVVT + +
Sbjct: 238 --VGGTLFEELGFYYVGPIDGHNLKHLLPVLKNVREYPT-GPVLIHVVTHKGKGYAPAEA 294
Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
+ + + I +Q AS SN LP Y F +AL EA D IV + A
Sbjct: 295 SLDKYHGVNRFDIITGKQVKAS-SNVLP-------YTKVFSKALREEASYDDKIVAITAA 346
Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
M L F EKFPER FDVG+AEQHAVTF+AG+AC G KPF I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDFFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQIIH 406
Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
DV Q+LPVRF I AG VG+DG T G+FDI F++ LP +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAA 466
Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 607
+ D P+ FRYPRG + DLP RG I EIGKG++L EG +AL+ +G + L A
Sbjct: 467 AYDQGPISFRYPRGEGIGMDLP-QRG-EILEIGKGRILHEGNRIALVCFGTRISEVLVAA 524
Query: 608 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 667
LS G+ TVADARF KPLD L+R L + H L+T+EEG+IGGFG+H+ F+A +GL
Sbjct: 525 DELSAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGL 584
Query: 668 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
L+ G+K R + LPD Y+ H S + L+ GL I T S LGR
Sbjct: 585 LEHGLKVRTLKLPDEYLNHGSQEKVLSRIGLDAVGIVNTVFSALGR 630
>sp|A1URW6|DXS_BARBK 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1
Length = 638
Score = 579 bits (1492), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/651 (48%), Positives = 414/651 (63%), Gaps = 31/651 (4%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V +PL L++L +L +LA E+R+E+ +VS T L + L VELT+ALH++F
Sbjct: 6 TPLLDCVLSPLDLRALPASDLARLADELRAEMIDVVSVTGGHLGAGLGVVELTIALHYIF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG Q Y HKILTGRR I TLR++ G+SG+T RSES YDPF AGH S+
Sbjct: 66 NTPDDRIIWDVGHQAYPHKILTGRRDKIRTLRQEGGLSGFTKRSESIYDPFGAGHSSTSI 125
Query: 199 SAGLGMAVARDIKGK-RECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
SAGLGMA+A +K + R ++ VI +G AG AYEAM+NAG LD+ +IVILND+ S+
Sbjct: 126 SAGLGMAMASALKAEERRNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185
Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
P A+S+ L+R+ S S+R LRE K +K+ + E A++ +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPSYRHLRERIKLFSKKFPKFFSEQASRSEEFARGFL 237
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAE 373
G TLF+ELG YY+GP+DGHN E L+ VL+ V + + GPVLVHVVT + + E
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNFEHLLPVLKNVRAYPN-GPVLVHVVTHKGKGYAPAEE 294
Query: 374 DTQKSEAIEK-----QQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
K + + ++ + S L +Y F +AL+ EA D IV + A M
Sbjct: 295 SADKYHGVNRFDVVTGKQVKAQSTRL-------SYTKVFSKALIEEATHDHKIVAITAAM 347
Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
L F EKF +R FDVG+AEQHAVTF+AG+AC G KPF I S FLQRAYDQ+++D
Sbjct: 348 PTGTGLDSFAEKFSDRMFDVGIAEQHAVTFAAGIACEGYKPFVAIYSTFLQRAYDQIIHD 407
Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
V Q+LPVRF I AG VG+DG T G+FDI F++ LP +VMAPSDE EL+ MV T A
Sbjct: 408 VSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAV 467
Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 608
D P+ FRYPRG + DLP RG + EIGKG+VL EG VAL+ +G + L A
Sbjct: 468 YDQGPISFRYPRGEGIGMDLP-QRG-EVLEIGKGRVLREGSRVALVCFGTQLSEVLVAAD 525
Query: 609 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 668
L+ GI TVADARF KPLD L+R L + H IT+EEG+IGGFG+HV F+A + LL
Sbjct: 526 ELAAEGISTTVADARFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALL 585
Query: 669 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG-RTREAL 718
+ G+K R + LPD Y+ H SP + L+ GL I + LG TR+ L
Sbjct: 586 EHGLKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSLGYETRKTL 636
>sp|A9IQP2|DXS_BART1 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1
Length = 635
Score = 576 bits (1484), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/646 (48%), Positives = 413/646 (63%), Gaps = 32/646 (4%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P L++L L QLA E+R+E VS T L + L VELTVALH++F
Sbjct: 6 TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG QTY HKILTGRR I TLR++ G+SG+T R ES YDPF AGH S+
Sbjct: 66 NTPEDRIIWDVGHQTYPHKILTGRREKIRTLRQEGGLSGFTKRVESVYDPFGAGHSSTSI 125
Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
SAGLGMAVA +K K+ ++ VI +G AG AYEAM+NAG L++ +IVILND+ S+
Sbjct: 126 SAGLGMAVASALKEEKKRKVIAVIGDGAMSAGMAYEAMNNAGALNARLIVILNDNDMSIA 185
Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
P ++S+ L+R+ S S+R LRE K +++++ + + A + +E+ARG++
Sbjct: 186 P--------PTGSMSAHLARLVSRPSYRHLRERVKMLSEKLPKFFWDKARRSEEFARGLL 237
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR------- 370
G TLF+ELG YY+GP+DGHN+ L+ VL+ V GPVLVHVVT + +
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLGHLLPVLKNVREY-PHGPVLVHVVTHKGKGYPPAEA 294
Query: 371 ---RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAG 427
+ + + +Q AS SN LP Y F +ALV EA D IV + A
Sbjct: 295 SSDKYHGVNRFDVTTGKQVKAS-SNILP-------YTKVFSKALVEEACHDDKIVGITAA 346
Query: 428 MEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVN 487
M L F EKFPE+ FDVG+AEQHAVTF+AGLAC G KPF I S FLQRAYDQ+++
Sbjct: 347 MPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAAGLACEGYKPFVAIYSTFLQRAYDQIIH 406
Query: 488 DVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVA 547
DV Q+LPVRF I AG VG+DG T G+FDI F++ LP +VMAPSDE EL+ MV T A
Sbjct: 407 DVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDELELMHMVRTAA 466
Query: 548 SIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKAR 607
+ D P+ FRYPRG + DLP RG I EIGKG+VL EG +AL+ +G + L+A
Sbjct: 467 AYDQGPISFRYPRGEGIGIDLP-QRG-EILEIGKGRVLREGNRIALVCFGTRMSEVLRAA 524
Query: 608 ALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGL 667
L G+ TVADARF KPLD L+R L + H L+T+EEG+IGGFG+H+ F+A +GL
Sbjct: 525 DRLGAKGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGL 584
Query: 668 LDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
L+ G+K R + PD Y+ H SP + L+ GL I T L+++GR
Sbjct: 585 LEHGLKVRTLKFPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTVVGR 630
>sp|Q6G0D4|DXS_BARQU 1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana
(strain Toulouse) GN=dxs PE=3 SV=1
Length = 640
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/642 (49%), Positives = 409/642 (63%), Gaps = 24/642 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L++L +L +LA E+R+E VS T L + L VELTVALH+VF
Sbjct: 6 TPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+I+WDVG QTY HKILTGRR I TLR++ G+SG+T RSES YDPF AGH S+
Sbjct: 66 NTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSI 125
Query: 199 SAGLGMAVARDIKG-KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLH 257
SAGLGM VA +K KR I+ VI +G AG AYEAM+NAG LD+ +IVILND+ S+
Sbjct: 126 SAGLGMTVASALKAEKRRNIIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIA 185
Query: 258 PKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMI 317
P A+S+ L+R+ S ++R LRE K +K++ + + A + +E+ARG +
Sbjct: 186 P--------PTGAMSAHLARLVSRPAYRSLRERIKMFSKKMPKFFLDKARRSEEFARGFL 237
Query: 318 GPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQK 377
G TLF+ELG YY+GP+DGHN++ L+ VL+ V + GPVLVHVVT + +
Sbjct: 238 --VGGTLFDELGFYYVGPIDGHNLKHLLPVLKNVREYPN-GPVLVHVVTHKGK---GYAP 291
Query: 378 SEAIEKQQEGASDSNSLPFGNYSRT------YDDCFIEALVMEAEKDKDIVVVHAGMEMD 431
+EA + G +S + G +T Y F +AL+ EA D IV + A M
Sbjct: 292 AEASSDKYHGV-NSFDVVTGKQIKTQSNALAYTKVFSKALIEEATHDNKIVGITAAMPTG 350
Query: 432 LSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQ 491
L F EKFPER FDVG+AEQHAVTF+AG+AC G KPF I S FLQRAYDQV++DV
Sbjct: 351 TGLDAFAEKFPERMFDVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQVIHDVSI 410
Query: 492 QRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDD 551
Q+LPVRF I AG VG+DG T G+FDI F++ LP +VMAPSDE EL+ MV T A+ D
Sbjct: 411 QKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQ 470
Query: 552 RPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLS 611
P+ FRYPRG V DLP RG + EIGKG+VL EG VAL+ +G + L A L
Sbjct: 471 GPISFRYPRGEGVGMDLP-QRG-ELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALI 528
Query: 612 KLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSG 671
G+ TVADARF KPLD L+R L H L+ VEEG+IGGFG+H+ F+A +GLL+ G
Sbjct: 529 AEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHG 588
Query: 672 VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
+K R + PD Y+ H SP + L+ GL I T + LGR
Sbjct: 589 LKVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630
>sp|B2IDK3|DXS_BEII9 1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica
subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
GN=dxs PE=3 SV=1
Length = 642
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/644 (47%), Positives = 414/644 (64%), Gaps = 19/644 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P L+ L +L QLA E+R+E VS T L + L VELTVALH+VF
Sbjct: 7 TPLLDTIATPTDLRRLKESDLAQLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+++WDVG Q Y HKILTGRR I TLR+ G+SG+T RSES YDPF H S+
Sbjct: 67 DTPHDRLIWDVGHQAYPHKILTGRRDRIRTLRRAGGLSGFTKRSESVYDPFGTAHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMA A + G ++ VI +G+ AG AYEAM+NAG + S +I+ILND+ S+ P
Sbjct: 127 SAGLGMAAATTLSGGNNNVIAVIGDGSMSAGMAYEAMNNAGAMHSRLIIILNDNEMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
ALS+ L+R+ S ++R +RE AK + + + +++ A K +E+AR
Sbjct: 187 PA--------GALSAYLARLVSGGTYRTVREAAKQLGRHLPHFIYDRARKTEEFARNFWA 238
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR----RAED 374
G T+FEELG+YY+GP+DGHN++ L+ VL+ V GP+LVHVVT++ + A
Sbjct: 239 --GGTMFEELGIYYVGPIDGHNLDHLLPVLKNVRDFKETGPILVHVVTQKGKGYAPAAAA 296
Query: 375 TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSL 434
+ K ++ + + + P N + +Y F +ALV EAE+D IV + A M L
Sbjct: 297 SDKYHSV-NTFDVVTGVQTKPKAN-APSYTRVFADALVKEAERDDKIVAITAAMPGGTGL 354
Query: 435 QLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRL 494
+F + FPER FDVG+AEQHAVTF+AGLA G +PFC + S FLQR YDQVV+DV Q L
Sbjct: 355 DVFGKAFPERTFDVGIAEQHAVTFAAGLATEGYRPFCALYSTFLQRGYDQVVHDVAIQNL 414
Query: 495 PVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPV 554
PVRF I AGLVG+DG T G+FD++++ LPNM++MA +DE ELV MVAT A+ D+ P+
Sbjct: 415 PVRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVIMAAADEAELVHMVATAAAYDEGPI 474
Query: 555 CFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLG 614
FRYPRG V +LP I +IG+G+++ EG VALL G + KA L+ G
Sbjct: 475 AFRYPRGEGVGIELPQIG--EILDIGRGRIVREGTTVALLSLGTRLAEASKAAEQLASYG 532
Query: 615 IDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD-SGVK 673
I VTVADARF KPLD+ LVR L +NH LIT+EEGS+GGFGS V +A +GLLD +G+K
Sbjct: 533 ISVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLK 592
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 717
+R +VLPD +++H P + A AGL I A L+ LGR EA
Sbjct: 593 FRSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636
>sp|Q2W367|DXS_MAGSA 1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1
Length = 644
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/646 (48%), Positives = 408/646 (63%), Gaps = 21/646 (3%)
Query: 76 KEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALH 135
K + +LD V +P ++ +I+EL+QL E+R E+ VS T L + L ELTVALH
Sbjct: 9 KPSSSLLDRVSSPADIRDFSIEELEQLTYEVRQEMIQSVSFTGGHLGAGLGVAELTVALH 68
Query: 136 HVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGC 195
H+F P D+++WDVG Q Y HKILTGRR + T+R+ G+SG+T RSESEYDPF AGH
Sbjct: 69 HIFDTPRDRLIWDVGHQAYPHKILTGRRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHSS 128
Query: 196 NSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHS 255
S+SA LGMAVARD+KG ++ VI +G AGQAYEAM+NAG S +IVILND+ S
Sbjct: 129 TSISAALGMAVARDLKGATNNVIAVIGDGAMSAGQAYEAMNNAGAAGSRLIVILNDNDMS 188
Query: 256 LHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARG 315
+ P + ALS+ LSR+ SS S+ LR + K + + + + +EYARG
Sbjct: 189 IAPP--------VGALSAHLSRLLSSPSYHSLRHLVKDLAHLLPPSLERAVGRAEEYARG 240
Query: 316 MIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDT 375
M+ G TLFEELG YY+GP+DGHN E L+ VL+ + PV++HVVT++ R
Sbjct: 241 MVS-GGGTLFEELGFYYVGPIDGHNFEHLLPVLKNLRDSDDTKPVMLHVVTKKGR---GY 296
Query: 376 QKSEAIEKQQEGASDSNSL------PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGME 429
+EA + G + L P N + +Y F +AL+ EAE D +V + A M
Sbjct: 297 PPAEAAADKYHGVGRFDVLTGQLEKPKAN-APSYTSVFAKALIAEAEVDDRVVAITAAMP 355
Query: 430 MDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDV 489
L F ++FP R FDVG+AEQHAVTF+ GLA G KPFC I S+FLQRAYDQV +DV
Sbjct: 356 GGTGLDKFGDRFPARTFDVGIAEQHAVTFAGGLATEGFKPFCAIYSSFLQRAYDQVQHDV 415
Query: 490 DQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASI 549
Q+LPVRF I AGLVG+DG T G++D+ F+ CLP++++M PSDE +L+ VAT SI
Sbjct: 416 VLQKLPVRFAIDRAGLVGADGATHAGSYDMAFLGCLPDIVIMCPSDEADLMHAVATAVSI 475
Query: 550 DDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 609
DDRP FRYPRG V +L RG + IGKG+V+ EG VA+L G + LKA
Sbjct: 476 DDRPSAFRYPRGEGVGIEL-SERG-SVMPIGKGRVVREGNRVAILSLGTRLAEALKAADE 533
Query: 610 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 669
L+ G+ TV DARF KPLD +L+ L + H LITVEEGS+GGFGSHV H +A G LD
Sbjct: 534 LAARGLAPTVVDARFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALD 593
Query: 670 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 715
+G+K RP+ LPD ++EH +P Q GL I AT L+ LG R
Sbjct: 594 NGLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEAR 639
>sp|Q0ARE5|DXS_MARMM 1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain
MCS10) GN=dxs PE=3 SV=1
Length = 643
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/641 (47%), Positives = 401/641 (62%), Gaps = 25/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TPILD V +P LK+L + LK LA E+R+E VS T L + L VELT ALHHVF
Sbjct: 7 TPILDTVNSPADLKNLPLDRLKSLADEVRAETIDAVSVTGGHLGAGLGVVELTTALHHVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D ++WDVG Q Y HKILTGRR I TLR+ G+SG+T RSESEYDPF A H S+
Sbjct: 67 DTPTDTLIWDVGHQCYPHKILTGRRDRIRTLRQPGGLSGFTKRSESEYDPFGAAHASTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SA LG AV RD+K + ++ VI +G+ AG AYEAM+NAG++ +IVILND+ S+ P
Sbjct: 127 SAALGFAVGRDLKDENRNVIAVIGDGSMSAGMAYEAMNNAGHIGGRLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S +R+ SS+ +R +R++ KG+ K + + E A + +EY RGM
Sbjct: 187 --------PVGAMSHYFARLVSSQRYRSIRKLGKGVAKAL--RVEEAARRAEEYMRGM-- 234
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEE+G Y+GP+DGH+++ L+ VL+ V G GPVL+HVVT++ + +
Sbjct: 235 AMGGTLFEEMGFRYVGPIDGHDLDQLVPVLRNVRD-GDNGPVLIHVVTQKGK---GYAPA 290
Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + + G + N + G + +Y F + L+ EAE D +V V A M
Sbjct: 291 EASDDKYHGVAKFNVIT-GEQQKSKAAAPSYTKVFAQQLIREAEADSRVVGVTAAMPGGT 349
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L LF E+FP+R FDVG+AEQHAVTF+AGLA G+KPF I S FLQR YDQVV+DV Q
Sbjct: 350 GLDLFGERFPDRMFDVGIAEQHAVTFAAGLAADGMKPFAAIYSTFLQRGYDQVVHDVAIQ 409
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
+LPVRF I AGLVG+DG T G+FDI ++ LP M++MA +DE EL MV T A IDD
Sbjct: 410 KLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVLMAAADELELSRMVKTAALIDDG 469
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P FRYPRG ++P I EIGKG+++ EG +A+L G ++ LKA L+
Sbjct: 470 PSAFRYPRGNGTGIEIPDQ--IEPLEIGKGRIVREGSRIAILSLGTRLEESLKAADALAA 527
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G TVADARF KPLD L+ L + H LITVEEG++GGFG+ V H +A G LD G+
Sbjct: 528 QGFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGL 587
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
+ R + LPD + + +P AGL HIAA AL +G+
Sbjct: 588 RIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGK 628
>sp|A5V6A9|DXS_SPHWW 1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii
(strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1
Length = 639
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 311/649 (47%), Positives = 403/649 (62%), Gaps = 21/649 (3%)
Query: 75 DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
D+ PTP+LD V P L+ L +L+QLA E+R+E+ S VS T L + L VELTVAL
Sbjct: 3 DRPPTPLLDTVSTPEDLRRLKPADLRQLADELRAEMISAVSVTGGHLGAGLGVVELTVAL 62
Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
H+VF P D ++WDVG Q Y HKILTGRR I TLR+ G+SG+T RSESEYDPF A H
Sbjct: 63 HYVFDTPRDVLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHS 122
Query: 195 CNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRH 254
S+SA LG AVA + K + VI +G AG AYEAM+NA + +IVILND+
Sbjct: 123 STSISAALGFAVANKLANKEGRAIAVIGDGAMSAGMAYEAMNNAKQAGNRLIVILNDNDM 182
Query: 255 SLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYAR 314
S+ P + ALS+ L++I SS+ F +R AK + +++ R +H++A + +EYAR
Sbjct: 183 SIAP--------PVGALSAYLAKIVSSRPFLSMRGFAKRVAQKLPRPIHDFAKRSEEYAR 234
Query: 315 GMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAED 374
GM G TLFEELG YY+GPVDGHN++ L+ +L+ V G GP+L+HVVT + +
Sbjct: 235 GMA--TGGTLFEELGFYYVGPVDGHNLDHLLPILENVRD-GDHGPILIHVVTNKGKGYAP 291
Query: 375 TQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
+ K ++K + P G S Y F +ALV EA++D I + A M
Sbjct: 292 AEAAADKYHGVQKFDVVSGVQAKAPPGPPS--YTGVFADALVAEAKRDDRICAITAAMPS 349
Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
L F + FPER FDVG+AEQHAVTF+AGLA G +PFC I S FLQRAYDQVV+DV
Sbjct: 350 GTGLDKFGKAFPERSFDVGIAEQHAVTFAAGLAAQGYRPFCAIYSTFLQRAYDQVVHDVA 409
Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
Q LPVRF I AGLVG+DG T G+FDIT+++ LPNM+VMA +DE ELV MV T A D
Sbjct: 410 IQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHD 469
Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIE-EIGKGKVLVEGKDVALLGYGAMVQNCLKARAL 609
P+ RYPRG V LP P IGKG+++ EGK VALL G + L+A
Sbjct: 470 SGPIALRYPRGNGVGVALP---AAPERLAIGKGRIVREGKTVALLSLGTRLGEALRAADQ 526
Query: 610 LSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLD 669
L LG+ TVAD RF KPLD +++ L +H +T+EEG+IGG G+HV + GL+D
Sbjct: 527 LDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLID 586
Query: 670 SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 718
G+K R + LPD + EH P +Q A AGL I AT L+ L R + L
Sbjct: 587 GGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGL 635
>sp|Q5LX42|DXS_RUEPO 1-deoxy-D-xylulose-5-phosphate synthase OS=Ruegeria pomeroyi
(strain ATCC 700808 / DSM 15171 / DSS-3) GN=dxs PE=3
SV=1
Length = 642
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 312/655 (47%), Positives = 412/655 (62%), Gaps = 35/655 (5%)
Query: 75 DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
D+ TP+LD V P LK + +L QLA E+R+E S VS T L + L VELTVAL
Sbjct: 3 DRPHTPLLDQVTRPADLKRFSDAQLTQLAGELRAETVSAVSVTGGHLGAGLGVVELTVAL 62
Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
H VF P DK++WDVG Q Y HKILT RR I TLR KDG+SG+T RSES YDPF A H
Sbjct: 63 HAVFDTPRDKVIWDVGHQCYPHKILTERRDRIRTLRMKDGLSGFTKRSESPYDPFGAAHS 122
Query: 195 CNSVSAGLGMAVARDIKG-KRECI---VTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
S+SA LG AVARD+ G E + + VI +G+ AG A+EAM+NAG+L +IVILN
Sbjct: 123 STSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNAGHLKKRLIVILN 182
Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
D+ S+ P + ALS+ LSR+ + + F++L+ AKG + E A +
Sbjct: 183 DNEMSIAP--------PVGALSNYLSRLYAEEPFQELKAAAKGAVSLLPEPFREGAKRAK 234
Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
E +GM G TLFEELG YIGP+DGH++ L+ VL+ V + + GP+L+HV+T++ +
Sbjct: 235 EMLKGMA--VGGTLFEELGFSYIGPIDGHDMGQLLPVLRTVKARAT-GPILLHVLTKKGK 291
Query: 371 ------RAED----TQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
RA D T K + + +Q+ A + + +Y F +ALV +A +D
Sbjct: 292 GYAPAERARDRGHATAKFDVVTGEQKKAPSN--------APSYTAVFGKALVDQAARDDK 343
Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
IV V A M L LF E++P R FDVG+AEQH VTFSA LA GGLKPFC + S FLQR
Sbjct: 344 IVAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQR 403
Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
YDQVV+DV QRLPVRF I AGLVG+DG T G+FDI +++ LP M+VMA +DE ELV
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELV 463
Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMV 600
MVAT A+ DD P+ FRYPRG V ++P + EIGKG+++ +G VALL +G +
Sbjct: 464 HMVATAAAHDDGPIAFRYPRGEGVGVEMPELG--KVLEIGKGRMIQKGARVALLSFGTRL 521
Query: 601 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 660
KA L+ GI T+ADARF KPLD L+ L +H LIT+EEG++GGFGSHV+
Sbjct: 522 TEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQ 581
Query: 661 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 715
+A +G+ D G+K+R +VLPD +I+ +SP A+AG+ I A L +LG R
Sbjct: 582 LLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLGIGR 636
>sp|Q1MKN4|DXS_RHIL3 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=dxs PE=3 SV=1
Length = 638
Score = 570 bits (1470), Expect = e-161, Method: Compositional matrix adjust.
Identities = 305/641 (47%), Positives = 406/641 (63%), Gaps = 23/641 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P L+ L ++L QLA E+R E+ VS+T L + L VELT+A+H VF
Sbjct: 7 TPLLDQVIYPADLRKLEDRDLPQLAREVRDEMIDAVSRTGGHLGAGLGVVELTIAIHSVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D++++DVG Q Y HKILTGRR I TLR++DG+SG+T R+ESEYDPF A H S+
Sbjct: 67 DTPDDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMA+A D+ ++ VI +G AG AYEA++NAG LD+ +IVILND+ S+ P
Sbjct: 127 SAGLGMAIAADLDKSDRRVIAVIGDGAMSAGMAYEALNNAGALDARLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++ R+ K +T +G+ + + E+ARG +
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKNIDRAITRAVEHARGYV- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G T+FEE+G Y+IGP+DGH+ + L+ VL+ V G GPVL+HVVT++ + +
Sbjct: 238 -TGGTMFEEMGFYHIGPIDGHSFDHLLPVLRNVRDNGR-GPVLIHVVTQKGK---GYPPA 292
Query: 379 EAIEKQQEGASDSNSLPFGNYSR------TYDDCFIEALVMEAEKDKDIVVVHAGMEMDL 432
EA + G + + + G +R +Y F EALV EA D IV + A M
Sbjct: 293 EAAADKYHGVNKFDVIT-GAQARVKPNAPSYTSVFAEALVQEATLDDKIVGITAAMPNGT 351
Query: 433 SLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQ 492
L E FP R FDVG+AEQHAVTF+AGLA G KPF + S FLQRAYDQVV+DV Q
Sbjct: 352 GLDKLAEAFPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQ 411
Query: 493 RLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDR 552
LPVRF I AG VG+DGPT G+FD F++ LP +VMA +DE EL MV T + D
Sbjct: 412 GLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGG 471
Query: 553 PVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSK 612
P+ FRYPRG V D+P RG I +IGKG+++ EG VALL +G + +CL A L
Sbjct: 472 PISFRYPRGEGVGVDMPA-RG-EILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDA 529
Query: 613 LGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGV 672
G+ TVADARF KPLD L+R+L ++H +ITVEEGSIGGFGSHV HF+A +GLLD+G+
Sbjct: 530 AGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGL 589
Query: 673 KWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
K R +V+PD ++E A P A AGL I +T LGR
Sbjct: 590 KLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630
>sp|A7IPK6|DXS_XANP2 1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3
SV=1
Length = 643
Score = 570 bits (1468), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/651 (48%), Positives = 413/651 (63%), Gaps = 26/651 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + + ++ L +L QLA E+R+E VS T L + L VELTVALHHVF
Sbjct: 6 TPLLDTIRDAADVRRLPQDKLAQLAAELRAETIDAVSVTGGHLGAGLGVVELTVALHHVF 65
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D+++WDVG Q Y HKILTGRR I TLR+ G+SG+T R+ESEYDPF A H S+
Sbjct: 66 NTPHDRLIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSI 125
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVARD+ G+ +V VI +G AG AYEAM+NAG +DS +IVILND+ S+ P
Sbjct: 126 SAGLGMAVARDLSGEERNVVCVIGDGAMSAGMAYEAMNNAGAMDSRLIVILNDNDMSIAP 185
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++R LRE+ K + + + + AA+ +E+ARG
Sbjct: 186 --------PTGAMSAYLARLISGQTYRSLREIGKQIAGHLPKFVERGAARAEEFARGFW- 236
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGHN++ L+ VL+ V GP+LVHVVT++ + +
Sbjct: 237 -TGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD-AKTGPILVHVVTQKGK---GYAPA 291
Query: 379 EAIEKQQEGASDSN-----SLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
EA + G + + + + +Y F E+L+ +A D +V + A M
Sbjct: 292 EASADKYHGVVKFDVVTGAQVKAKSNAPSYTRVFAESLISQARHDPKVVAITAAMPSGTG 351
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L LF + +PER FDVG+AEQHAVTF+AGLA G KPFC + S FLQRAYDQVV+DV Q
Sbjct: 352 LDLFGQVYPERTFDVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRAYDQVVHDVALQG 411
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF+I AGLVG+DG T GAFDI F++CLP M VMAP+DE ELV M+AT+ + DD P
Sbjct: 412 LPVRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGP 471
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGK---DVALLGYGAMVQNCLKARALL 610
R+PRG V + P RG + IGKG++ V G D+ALL G + CL A L
Sbjct: 472 SAVRFPRGEGVGVERP-ERG-EVLPIGKGRI-VHGTGEGDIALLSLGTRLAACLDAAERL 528
Query: 611 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 670
G VTVADARF KPLD +LV +L H L+TVEEGS+GGFGSHV + +GLLD
Sbjct: 529 EAAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDR 588
Query: 671 G-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 720
G VK R +VLPD YI+ + +QLA AGL I A LLG+ + + L
Sbjct: 589 GAVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAKAGVSL 639
>sp|Q2RYD6|DXS1_RHORT 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1
Length = 645
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/638 (47%), Positives = 398/638 (62%), Gaps = 19/638 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P + L++ +L+QLA E+R+E+ VS T L S L VELTVALHHVF
Sbjct: 7 TPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R ES YDPF AGH S+
Sbjct: 67 DTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMA+ + G +V VI +G+ AG AYEAM+NAG S +IVILND+ S+ P
Sbjct: 127 SAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S+ LSR+ SSKS+ +R +AK + R+ + A + +EYARGM+
Sbjct: 187 P--------VGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMV- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG YY+GP+DGH ++ L+ VL+ V G GPVL+HVVT++ + +
Sbjct: 238 TGGGTLFEELGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGK---GYAPA 294
Query: 379 EAIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
E + G S N + + +Y F + LV A KD IV V A M
Sbjct: 295 ENAPDKYHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVGVTAAMPGGTG 354
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L +P+R FDVG+AEQHAVTF+AGLAC GLKPF + S+FLQR YDQVV+DV Q+
Sbjct: 355 LDKLATAYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQK 414
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AG VG+DG T G FD+ F+ CLPN++VM +DE EL MV T A D P
Sbjct: 415 LPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGP 474
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
+ RYPRG V ++P P+ IGKG+++ EGK VALL G +Q+CL+A +L+
Sbjct: 475 IALRYPRGEGVGVEIP-EDPQPL-AIGKGRIVREGKGVALLSIGTRLQSCLEACEILAAR 532
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ TVADARF KP D +LV +L H LI VEEG+IGGFG+HV+ ++ GLLD G+K
Sbjct: 533 GLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLK 592
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 711
R + +PD + EH +P Q A AG+ I L L
Sbjct: 593 LRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
>sp|Q28WA7|DXS1_JANSC 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain
CCS1) GN=dxs1 PE=3 SV=1
Length = 639
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/642 (46%), Positives = 406/642 (63%), Gaps = 17/642 (2%)
Query: 75 DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
D+ TP+LD V++P LK L+ +LK+LA E+R+E+ VSKT + L VELTVAL
Sbjct: 3 DRPSTPLLDNVQSPNDLKGLSDFDLKRLADELRAEMIWTVSKTGGHFGAGLGVVELTVAL 62
Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
H VF P DK++WDV Q Y HKILTGRR + T+R+KDG+SG+T RSES +DPF A H
Sbjct: 63 HSVFDTPRDKLVWDVSHQCYPHKILTGRRDQMLTIRQKDGLSGFTKRSESPFDPFGAAHS 122
Query: 195 CNSVSAGLGMAVARDIKGKREC----IVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
S+SA LG AVARD+ G + + VI +G G A+EAM+NAG+L +IVILN
Sbjct: 123 STSISAALGFAVARDLGGDSDTGHGDAIAVIGDGAMSGGMAFEAMNNAGHLGKRLIVILN 182
Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
D+ S+ P ALSS LSR+ + F++ + AKG + E A +
Sbjct: 183 DNEMSIAPPT--------GALSSYLSRLYAGAPFQEFKAAAKGAVSLLPEPFQEGARRAK 234
Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
E + G TLFEELG Y+GP+DGH++E L+SVL+ V + GP+L+H +T++ +
Sbjct: 235 ELLKSAT--VGGTLFEELGFSYVGPIDGHDMESLLSVLRTVKARAD-GPILIHAITKKGK 291
Query: 371 RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEM 430
+ + + + + + + +Y F ++L+ EAE D +V V A M
Sbjct: 292 GYSEHRADRGHATAKFNIATGEQVKAPSNAPSYTKVFAQSLIAEAEDDPKVVAVTAAMPD 351
Query: 431 DLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVD 490
L LF E+FP R FDVG+AEQH VTF+AG+A GGLKPF I S FLQR YDQVV+DV
Sbjct: 352 GTGLDLFAERFPSRCFDVGIAEQHGVTFAAGMAAGGLKPFAAIYSTFLQRGYDQVVHDVA 411
Query: 491 QQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASID 550
QRLPVRF I AGLVG+DG T G++DI++++ LP +VMA +DE EL MV T ID
Sbjct: 412 IQRLPVRFAIDRAGLVGADGCTHAGSYDISYLANLPGFVVMAAADEAELRHMVRTALEID 471
Query: 551 DRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALL 610
DRP FR+PRG + D+P RG + EIGKG+++ EG VA+L +G ++ +A L
Sbjct: 472 DRPSAFRFPRGEGMGVDMPD-RGTAL-EIGKGRMISEGNRVAILNFGTRLKEVQEAAETL 529
Query: 611 SKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDS 670
S+ GI T+ADARF KPLD L+ +L ++H LITVEEG++GGFGSHV+H +A + + D+
Sbjct: 530 SQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDT 589
Query: 671 GVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 712
G+K+R +VLPD +I+ ASP A+AG+ I A L+ LG
Sbjct: 590 GIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631
>sp|Q2RR29|DXS2_RHORT 1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1
Length = 645
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/638 (47%), Positives = 398/638 (62%), Gaps = 19/638 (2%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD + P + L++ +L+QLA E+R+E+ VS T L S L VELTVALHHVF
Sbjct: 7 TPLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D+I+WDVG Q Y HKILTGRR I TLR+ G+SG+T R ES YDPF AGH S+
Sbjct: 67 DTPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMA+ + G +V VI +G+ AG AYEAM+NAG S +IVILND+ S+ P
Sbjct: 127 SAGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ A+S+ LSR+ SSKS+ +R +AK + R+ + A + +EYARGM+
Sbjct: 187 P--------VGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMV- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEE+G YY+GP+DGH ++ L+ VL+ V G GPVL+HVVT++ + +
Sbjct: 238 TGGGTLFEEMGFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGK---GYAPA 294
Query: 379 EAIEKQQEGASDSNSL-----PFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
E + G S N + + +Y F + LV A KD IV V A M
Sbjct: 295 ENAPDKYHGVSRFNVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTG 354
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L +P+R FDVG+AEQHAVTF+AGLAC GLKPF + S+FLQR YDQVV+DV Q+
Sbjct: 355 LDKLAAAYPQRCFDVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQK 414
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AG VG+DG T G FD+ F+ CLPN++VM +DE EL MV T A D P
Sbjct: 415 LPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGP 474
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
+ RYPRG V ++P P+ IGKG+++ EGK VALL G +Q+CL+A +L+
Sbjct: 475 IALRYPRGEGVGVEIP-EDPQPL-AIGKGRIVREGKGVALLSIGTRLQSCLEACEILAAR 532
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ TVADARF KP D +LV +L H LI VEEG+IGGF SHV+ ++A GLLD G+K
Sbjct: 533 GLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLK 592
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 711
R + +PD + EH +P Q A AG+ I L L
Sbjct: 593 LRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
>sp|Q16CP0|DXS2_ROSDO 1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3
SV=1
Length = 642
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/652 (46%), Positives = 401/652 (61%), Gaps = 35/652 (5%)
Query: 75 DKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVAL 134
D TP+LDLV P +K L+ ++L QLA E+RSE S VS T L + L VELTVAL
Sbjct: 3 DMPKTPLLDLVHRPADMKGLSDRQLVQLADELRSETVSAVSVTGGHLGAGLGVVELTVAL 62
Query: 135 HHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHG 194
H VF P DKI+WDVG Q Y HKILT RR I TLR K G+SG+T RSES YDPF A H
Sbjct: 63 HAVFDTPRDKIIWDVGHQCYPHKILTERRDRIRTLRMKGGLSGFTKRSESPYDPFGAAHS 122
Query: 195 CNSVSAGLGMAVARDIKG----KRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILN 250
S+SA LG AVARD+ G + VI +G+ AG AYEAM+NAG+L MIVILN
Sbjct: 123 STSISAALGFAVARDLGGVVPEGLGDAIAVIGDGSMSAGMAYEAMNNAGHLKKRMIVILN 182
Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
D+ S+ P A+SS LSR+ S + F+ + AKG + E A +
Sbjct: 183 DNEMSIAPPT--------GAMSSYLSRLYSGEPFQDFKAAAKGAVSLLPEPFREGAKRAK 234
Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
+ +GM G TLFEELG YIGP+DGH+++ L+ +L+ V + + GP+++H +T++ +
Sbjct: 235 DMLKGMA--VGGTLFEELGFSYIGPIDGHDLDQLLPLLRTVKARAT-GPIMIHALTKKGK 291
Query: 371 ----------RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKD 420
+ T K + + QQ A + + +Y F ++L+ EA KD
Sbjct: 292 GYAPAETARDKGHATAKFDVLTGQQTKAPSN--------APSYTKVFAQSLLEEATKDDK 343
Query: 421 IVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQR 480
I V A M L LF E+FP R FDVG+AEQH VTFSA LA GG+KPFC + S FLQR
Sbjct: 344 ICAVTAAMPDGTGLNLFAERFPSRCFDVGIAEQHGVTFSAALAAGGMKPFCAMYSTFLQR 403
Query: 481 AYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELV 540
YDQVV+DV QRLPVRF I AGLVG+DG T G+FDI +++ LP +VMA +DE EL
Sbjct: 404 GYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELK 463
Query: 541 DMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMV 600
MVAT + DD P+ FR+PRG D+P + EIGKG+++ EG VA+L +G +
Sbjct: 464 HMVATAVAHDDGPIAFRFPRGEGNGVDMPEVG--EVLEIGKGRIITEGTRVAILSFGTRL 521
Query: 601 QNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSH 660
KA L+ GI T+ADARF KPLD +++ +L NH LITVEEG+IGGFGSHV+
Sbjct: 522 AEVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQ 581
Query: 661 FIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 712
++ +G+ D+G K+R +VLPD +I+ +SP A+AG+ I LS+LG
Sbjct: 582 LLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633
>sp|Q92RJ1|DXS_RHIME 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti
(strain 1021) GN=dxs PE=3 SV=1
Length = 645
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/640 (46%), Positives = 407/640 (63%), Gaps = 21/640 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V+ P LK + ++L QLA E+R+E+ VS+T L + L VELT+A+H +F
Sbjct: 12 TPLLDKVDYPDDLKKIDDRDLPQLAAELRAEMVDAVSRTGGHLGAGLGVVELTIAIHKIF 71
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
P D++++DVG Q Y HKILTGRR I TLR++DG+SG+T R+ESEYDPF A H S+
Sbjct: 72 DTPHDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSI 131
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA ++ GK ++ VI +G AG A+EA++NAG LD+ +IVILND+ S+ P
Sbjct: 132 SAGLGMAVAAELDGKSRNVIAVIGDGAMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 191
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++ +REV K +T +G+ + + E+ARG +
Sbjct: 192 --------PTGAMSAYLARLASGRTYMGIREVGKKLTAYLGKTVDRAITRAVEHARGYV- 242
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEE+G Y+IGP+DGH+ + L+ VL+ V + GPVL+HVVT++ + +
Sbjct: 243 -TGGTLFEEMGFYHIGPIDGHSFDHLLPVLRNVRD-NAKGPVLIHVVTQKGK---GYPPA 297
Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
EA + G + + + + Y F +AL EA D IV + A M
Sbjct: 298 EAAADKYHGVNKFDVITGAQAKAKPNAPAYTSVFADALTQEASLDDKIVAITAAMPSGTG 357
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L F P R FDVG+AEQHAVTF+AGLA G KPF + S FLQRAYDQVV+DV Q
Sbjct: 358 LDKFASVHPSRCFDVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQG 417
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AG VG+DGPT G+FD T+++ LP +VMA +DE EL MV T A+ D+ P
Sbjct: 418 LPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGP 477
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
+ FRYPRG V +LP RG I IGKG+++ +G VALL +G + +CL A L
Sbjct: 478 ISFRYPRGEGVGVELP-ERG-EILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAA 535
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ TVADARF KPLD L+R+L ++H LIT+EEG++GGF SHV F+A +GL+D G+K
Sbjct: 536 GLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLK 595
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
RP+V+PD ++E A P A AGL I +T LG+
Sbjct: 596 VRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635
>sp|Q5NN52|DXS1_ZYMMO 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=dxs1
PE=3 SV=1
Length = 649
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 303/646 (46%), Positives = 398/646 (61%), Gaps = 19/646 (2%)
Query: 73 FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
+ + TP+LD ++ P L+ L L+QLA E+R E S V T L S L +ELTV
Sbjct: 1 MFPNDKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60
Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
ALH+VF+ P D ++WDVG QTY HKILTGRR I TLR++DG+SG+T R+ESEYD F A
Sbjct: 61 ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120
Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
H S+SA LG A+A + + V +I +G+ AG AYEAM+NA +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180
Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
S+ P + ALSS LSR+ SS+ F LR++ +G+ R+ +G+ A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232
Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
ARGM G T FEELG YY+GPVDGHN++ LI VL+ V GP+LVHVVT + +
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289
Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
AE + K A+++ + P G S Y F E L+ EA++D IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347
Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
L FQ+ FPER FDVG+AEQHAVTF+AGLA G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407
Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
V Q LPVRF + AGLVG+DG T G+FD+ FM LPNM+VMAPSDE EL +MV ++A
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAH 467
Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 608
D P+ RYPRG V L G + I IGKG+++ GK VA+L G ++ LKA
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEK--EILPIGKGRLIRRGKKVAILSLGTRLEESLKAAD 525
Query: 609 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 668
L G+ +VAD RF KPLD L R+L ++H +IT+EEG++GGF + V + +GL+
Sbjct: 526 RLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLM 585
Query: 669 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 714
D G+K R + LPD + +Q A AGL I A +S L R
Sbjct: 586 DDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRN 631
>sp|Q8UHD7|DXS_AGRT5 1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1
Length = 639
Score = 563 bits (1452), Expect = e-159, Method: Compositional matrix adjust.
Identities = 299/640 (46%), Positives = 405/640 (63%), Gaps = 21/640 (3%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P LK + ++L +LA E+R E+ VSKT L + L VELT+A+H VF
Sbjct: 7 TPLLDRVNFPSDLKEIDDRDLPELARELRDEMIDAVSKTGGHLGAGLGVVELTIAIHKVF 66
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P D++++DVG Q Y HKILTGRR I TLR++DG+SG+T R+ESEYD F AGH S+
Sbjct: 67 NTPEDRLIFDVGHQCYPHKILTGRRDRIRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSI 126
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SAGLGMAVA + G ++ VI +G+ AG A+EA++NAG LD+ +IVILND+ S+ P
Sbjct: 127 SAGLGMAVAAGLDGSDRKVIAVIGDGSMSAGMAFEALNNAGALDARLIVILNDNDMSIAP 186
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
A+S+ L+R+ S +++ R+ K +T +G+ + + +ARG +
Sbjct: 187 --------PTGAMSAYLARLASGRTYMGFRDFGKKLTAYLGKTIDRAITRAVTHARGYV- 237
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKS 378
G TLFEELG Y+IGP+DGH+ + L+ VL+ V GPVL+HVVT++ + +
Sbjct: 238 -TGGTLFEELGFYHIGPIDGHSFDHLLPVLRNVRD-NQKGPVLIHVVTQKGK---GYAPA 292
Query: 379 EAIEKQQEGASDSNSLPFGNY-----SRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLS 433
EA + G + + + + +Y F EAL+ EA D+ I+ V A M
Sbjct: 293 EAAADKYHGVNKFDVITGAQAKAKPNAPSYTSVFAEALIQEATLDEKIIGVTAAMPNGTG 352
Query: 434 LQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQR 493
L E FP R FDVG+AEQHAVTF+AGLA G KPFC + S FLQR YDQ+V+DV Q
Sbjct: 353 LDKMAELFPSRTFDVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQS 412
Query: 494 LPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRP 553
LPVRF I AG VG+DGPT G+FD TF++ LP M+VMA +DE EL MV T A+ D+ P
Sbjct: 413 LPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGP 472
Query: 554 VCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKL 613
+ FRYPRG V ++P RG I +IGKG+++ EG VALL +G + CL A L
Sbjct: 473 ISFRYPRGEGVGVEMPA-RG-EILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAA 530
Query: 614 GIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVK 673
G+ TVADARF KPLD+ L+R+L +H L+T+EEGS+GGFG+HV HF+A GLLD G K
Sbjct: 531 GLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPK 590
Query: 674 WRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 713
R + LPD ++E A P A AGL I +T + LG+
Sbjct: 591 VRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630
>sp|Q5FUB1|DXS_GLUOX 1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans
(strain 621H) GN=dxs PE=3 SV=2
Length = 660
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 304/653 (46%), Positives = 407/653 (62%), Gaps = 35/653 (5%)
Query: 80 PILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFH 139
P LD V P +++L++ +LKQLA E+RSE VS T L +SL VELTVALH VF+
Sbjct: 15 PELDRVRFPADMRNLSVDQLKQLADELRSETVDAVSTTGGHLGASLGVVELTVALHAVFN 74
Query: 140 APVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVS 199
P D+I+WDVG Q Y HKILTGRR I TLR+ +G+SG+T R+ESEYDPF A H S+S
Sbjct: 75 TPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSIS 134
Query: 200 AGLGMAVARDIKGKRE------CIVTVISNGTTMAGQAYEAMSNA---GYLDSNMIVILN 250
AGLGMAVA ++ + + ++ VI +G+ AG AYEAM+NA G + +IV+LN
Sbjct: 135 AGLGMAVAHHLRAEEDPSYHERNVIAVIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLN 194
Query: 251 DSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVD 310
D+ S+ P + ++S LSR+ SS+ F LR++A + KR+ + A + +
Sbjct: 195 DNEMSIAPPV--------GSMSDYLSRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAE 246
Query: 311 EYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR 370
EYARGMI G TLFEELG YY+GPV+GH++ L+ +L+ + GP+L+H++TE+ R
Sbjct: 247 EYARGMI--TGGTLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGR 304
Query: 371 RAEDTQ----KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHA 426
+ + K A+ K + P G S Y F L+ A+ D ++ + A
Sbjct: 305 GYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPS--YTSIFSRELMRRAKTDDKLITITA 362
Query: 427 GMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVV 486
M L F + +P+R+FDVG+AEQHAVTF+AG+A GL+PFC I S FLQRAYDQVV
Sbjct: 363 AMPSGTGLNAFAKAYPDRFFDVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVV 422
Query: 487 NDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATV 546
+DV Q LPVRF I AGLVG+DG T GAFD+ ++ CLPNM+VMAPSDE EL+ AT
Sbjct: 423 HDVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATA 482
Query: 547 ASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGK-------DVALLGYGAM 599
D P+ FRYPRG + DLP +G + EIGKG+++ E + VA+L G
Sbjct: 483 CEYDAGPIAFRYPRGNGIGLDLP-EKG-EVLEIGKGRIVREARRAPNARGGVAILSLGPR 540
Query: 600 VQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVS 659
+ L+A L+ G+ VTVADARF KP+D LV +L + H IT+EEG+IGGF S V
Sbjct: 541 MHESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVV 600
Query: 660 HFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 712
+A GLLD VK+RP+ LPD YI+H + Q AGLT HI TA LG
Sbjct: 601 QHLAETGLLDK-VKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 652
>sp|Q5NM38|DXS2_ZYMMO 1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=dxs2
PE=3 SV=2
Length = 650
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/646 (46%), Positives = 397/646 (61%), Gaps = 19/646 (2%)
Query: 73 FWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTV 132
+ + TP+LD ++ P L+ L L+QLA E+R E S V T L S L +ELTV
Sbjct: 1 MFPNKKTPLLDKIKTPAELRQLDRNSLRQLADELRKETISAVGVTGGHLGSGLGVIELTV 60
Query: 133 ALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAG 192
ALH+VF+ P D ++WDVG QTY HKILTGRR I TLR++DG+SG+T R+ESEYD F A
Sbjct: 61 ALHYVFNTPKDALVWDVGHQTYPHKILTGRRDRIRTLRQRDGLSGFTQRAESEYDAFGAA 120
Query: 193 HGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDS 252
H S+SA LG A+A + + V +I +G+ AG AYEAM+NA +IVILND+
Sbjct: 121 HSSTSISAALGFAMASKLSDSDDKAVAIIGDGSMTAGMAYEAMNNAKAAGKRLIVILNDN 180
Query: 253 RHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEY 312
S+ P + ALSS LSR+ SS+ F LR++ +G+ R+ +G+ A K DEY
Sbjct: 181 EMSISP--------PVGALSSYLSRLISSRPFMNLRDIMRGVVNRMPKGLATAARKADEY 232
Query: 313 ARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRR- 371
ARGM G T FEELG YY+GPVDGHN++ LI VL+ V GP+LVHVVT + +
Sbjct: 233 ARGMA--TGGTFFEELGFYYVGPVDGHNLDQLIPVLENVRDAKD-GPILVHVVTRKGQGY 289
Query: 372 --AEDTQ-KSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
AE + K A+++ + P G S Y F E L+ EA++D IV + A M
Sbjct: 290 APAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS--YTSVFSEQLIKEAKQDDKIVTITAAM 347
Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
L FQ+ FPER FDVG+AEQHAVTF+AGLA G KPFC + S FLQR YDQ+V+D
Sbjct: 348 PTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGLAAAGYKPFCCLYSTFLQRGYDQLVHD 407
Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
V Q LPVRF + AGLVG+DG T G+FD+ FM LPNM+VMAPSDE EL +MV ++A
Sbjct: 408 VAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAH 467
Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 608
D P+ RYPRG V L G + I IGKG+++ GK VA+L G ++ LKA
Sbjct: 468 YDQGPISVRYPRGNGVGVSLEGEK--EILPIGKGRLIRRGKKVAILSLGTRLEESLKAAD 525
Query: 609 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 668
L G+ +VAD RF KPLD L R+L ++H +IT+EEG++GGF + V + +GL+
Sbjct: 526 RLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLM 585
Query: 669 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 714
D G+K R + LPD + +Q A AGL I A + L R
Sbjct: 586 DDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRN 631
>sp|Q3J1A8|DXS1_RHOS4 1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=dxs1 PE=3 SV=1
Length = 648
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 297/647 (45%), Positives = 409/647 (63%), Gaps = 31/647 (4%)
Query: 79 TPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVF 138
TP+LD V P +K+L+ EL++LA E+RSE+ S+V++T L SSL VELTVALH VF
Sbjct: 10 TPLLDRVCCPADMKALSDAELERLADEVRSEVISVVAETGGHLGSSLGVVELTVALHAVF 69
Query: 139 HAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSV 198
+ P DK++WDVG Q Y HKILTGRR + TLR+K G+SG+T RSES YDPF A H S+
Sbjct: 70 NTPTDKLVWDVGHQCYPHKILTGRREQMRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSI 129
Query: 199 SAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHP 258
SA LG A+ R++ + VI +G+ AG AYEA+++AG+L+ + VILND+ S+ P
Sbjct: 130 SAALGFAMGRELGQPVGDTIAVIGDGSITAGMAYEALNHAGHLNKRLFVILNDNDMSIAP 189
Query: 259 KIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIG 318
+ AL+ L + S F LR A G+ + + + A + + GM
Sbjct: 190 P--------VGALARYLVNLSSKAPFATLRAAADGLEASLPGPLRDGARRARQLVTGM-- 239
Query: 319 PQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENR-------- 370
P G TLFEELG Y+GP+DGH++E L+ L+ A + GPVL+HVVT++ +
Sbjct: 240 PGGGTLFEELGFTYVGPIDGHDMEALLQTLR-AARARTTGPVLIHVVTKKGKGYAPAENA 298
Query: 371 --RAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGM 428
+ K + + +Q+ S +N+ NY++ + E EA +D IV + A M
Sbjct: 299 PDKYHGVNKFDPVTGEQK-KSVANAP---NYTKVFGSTLTE----EAARDPRIVAITAAM 350
Query: 429 EMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVND 488
+ + Q++FP R FDVG+AEQHAVTF+AGLA G+KPFC I S+FLQR YDQ+ +D
Sbjct: 351 PSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGLAGAGMKPFCAIYSSFLQRGYDQIAHD 410
Query: 489 VDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVAS 548
V Q LPVRFVI AGLVG+DG T GAFD+ F++ LPNM VMA +DE EL+ M+AT +
Sbjct: 411 VALQNLPVRFVIDRAGLVGADGATHAGAFDVGFITSLPNMTVMAAADEAELIHMIATAVA 470
Query: 549 IDDRPVCFRYPRGAIVRTDLPGYRGIPIEEIGKGKVLVEGKDVALLGYGAMVQNCLKARA 608
D+ P+ FR+PRG V ++P RG +E G+G+V+ EG DVA+L +GA + L+A
Sbjct: 471 FDEGPIAFRFPRGEGVGVEMP-ERGTVLEP-GRGRVVREGTDVAILSFGAHLHEALQAAK 528
Query: 609 LLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLL 668
LL G+ VTVADARF +PLD L+ +L ++H L+TVE+G++GGFG+HV H++A G
Sbjct: 529 LLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGF 588
Query: 669 DSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 715
D G+ R + LPD +IE ASP A AGL IAATA L R R
Sbjct: 589 DGGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGR 635
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,797,006
Number of Sequences: 539616
Number of extensions: 10848640
Number of successful extensions: 33815
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 30478
Number of HSP's gapped (non-prelim): 724
length of query: 722
length of database: 191,569,459
effective HSP length: 125
effective length of query: 597
effective length of database: 124,117,459
effective search space: 74098123023
effective search space used: 74098123023
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)