Query 004948
Match_columns 722
No_of_seqs 318 out of 2191
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:43:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 3.4E-50 1.2E-54 471.6 47.3 464 12-491 76-660 (662)
2 2xag_A Lysine-specific histone 100.0 5E-50 1.7E-54 476.6 45.3 467 12-494 247-834 (852)
3 4gut_A Lysine-specific histone 100.0 6.6E-49 2.3E-53 464.4 44.0 469 9-487 298-775 (776)
4 1rsg_A FMS1 protein; FAD bindi 100.0 6.3E-45 2.1E-49 415.6 41.2 429 47-492 8-510 (516)
5 1s3e_A Amine oxidase [flavin-c 100.0 8.9E-45 3.1E-49 414.7 40.1 441 47-510 4-474 (520)
6 1b37_A Protein (polyamine oxid 100.0 2.1E-41 7.2E-46 382.1 40.5 433 47-494 4-463 (472)
7 2vvm_A Monoamine oxidase N; FA 100.0 1E-41 3.6E-46 386.7 33.7 415 47-493 39-489 (495)
8 2yg5_A Putrescine oxidase; oxi 100.0 4.3E-42 1.5E-46 385.2 30.1 419 47-490 5-452 (453)
9 2iid_A L-amino-acid oxidase; f 100.0 1.9E-39 6.5E-44 368.4 40.2 421 47-491 33-486 (498)
10 3k7m_X 6-hydroxy-L-nicotine ox 100.0 8.7E-39 3E-43 355.9 36.0 400 48-487 2-424 (431)
11 2jae_A L-amino acid oxidase; o 100.0 8E-39 2.7E-43 362.4 31.8 425 47-491 11-487 (489)
12 3i6d_A Protoporphyrinogen oxid 100.0 1.9E-37 6.4E-42 348.2 29.6 408 47-489 5-468 (470)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 1E-36 3.5E-41 343.9 30.5 413 47-492 16-476 (478)
14 1sez_A Protoporphyrinogen oxid 100.0 3.5E-36 1.2E-40 341.9 25.6 415 46-492 12-496 (504)
15 3lov_A Protoporphyrinogen oxid 100.0 3.6E-35 1.2E-39 331.1 27.4 407 47-493 4-469 (475)
16 3ayj_A Pro-enzyme of L-phenyla 100.0 7.5E-35 2.6E-39 337.7 26.2 258 236-496 336-686 (721)
17 3nks_A Protoporphyrinogen oxid 100.0 2.8E-34 9.6E-39 323.7 19.8 407 47-487 2-472 (477)
18 4dgk_A Phytoene dehydrogenase; 100.0 2.3E-32 7.8E-37 310.1 32.0 421 47-494 1-496 (501)
19 3ka7_A Oxidoreductase; structu 100.0 9.1E-33 3.1E-37 306.5 25.7 399 48-486 1-424 (425)
20 4gde_A UDP-galactopyranose mut 100.0 3.9E-32 1.3E-36 308.7 27.8 408 47-487 10-477 (513)
21 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 2.4E-31 8.2E-36 287.0 26.8 327 48-488 2-341 (342)
22 3nrn_A Uncharacterized protein 100.0 1.2E-29 4E-34 281.6 25.3 387 48-485 1-403 (421)
23 4dsg_A UDP-galactopyranose mut 100.0 2.8E-28 9.6E-33 275.6 28.6 409 47-486 9-452 (484)
24 2b9w_A Putative aminooxidase; 100.0 4.9E-29 1.7E-33 276.7 19.8 396 47-486 6-423 (424)
25 1yvv_A Amine oxidase, flavin-c 99.9 1.5E-25 5.1E-30 240.2 30.4 321 47-490 2-328 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 2.4E-23 8.2E-28 229.6 8.1 251 47-336 7-274 (399)
27 1i8t_A UDP-galactopyranose mut 99.8 2.2E-20 7.5E-25 203.6 19.0 250 48-337 2-261 (367)
28 2bi7_A UDP-galactopyranose mut 99.8 1.5E-20 5.2E-25 206.0 15.7 244 47-333 3-260 (384)
29 3hdq_A UDP-galactopyranose mut 99.8 1.8E-19 6.1E-24 197.3 16.6 251 46-337 28-289 (397)
30 2bcg_G Secretory pathway GDP d 99.8 2.9E-18 9.9E-23 192.0 26.3 374 46-486 10-438 (453)
31 3kkj_A Amine oxidase, flavin-c 99.8 6.4E-17 2.2E-21 164.2 27.6 59 47-112 2-60 (336)
32 2e1m_A L-glutamate oxidase; L- 99.7 1.8E-16 6.3E-21 172.1 23.3 86 46-132 43-132 (376)
33 1d5t_A Guanine nucleotide diss 99.7 1.2E-16 4E-21 177.9 19.1 242 47-297 6-290 (433)
34 2e1m_C L-glutamate oxidase; L- 99.6 1.7E-16 5.9E-21 155.0 7.7 119 370-494 37-157 (181)
35 3p1w_A Rabgdi protein; GDI RAB 99.6 7.6E-15 2.6E-19 163.8 15.8 240 46-295 19-312 (475)
36 1vg0_A RAB proteins geranylger 99.4 3E-11 1E-15 138.7 25.2 85 237-337 368-461 (650)
37 3oz2_A Digeranylgeranylglycero 99.2 3.3E-10 1.1E-14 122.8 17.5 38 47-84 4-41 (397)
38 3rp8_A Flavoprotein monooxygen 99.1 7.8E-10 2.7E-14 121.4 17.4 41 257-297 140-181 (407)
39 3ihg_A RDME; flavoenzyme, anth 99.1 6E-10 2.1E-14 127.0 15.2 37 47-83 5-41 (535)
40 3dme_A Conserved exported prot 99.0 2.3E-09 7.9E-14 115.1 16.4 41 47-87 4-44 (369)
41 2gf3_A MSOX, monomeric sarcosi 99.0 9.6E-09 3.3E-13 111.5 21.4 42 256-297 164-205 (389)
42 3nyc_A D-arginine dehydrogenas 99.0 9.4E-10 3.2E-14 118.9 13.1 42 256-297 168-209 (381)
43 3ps9_A TRNA 5-methylaminomethy 99.0 2.5E-09 8.6E-14 125.4 16.5 42 256-297 431-473 (676)
44 3dje_A Fructosyl amine: oxygen 99.0 2E-09 6.7E-14 119.3 14.4 40 47-86 6-46 (438)
45 3v76_A Flavoprotein; structura 99.0 1.5E-09 5.2E-14 119.7 13.4 41 46-86 26-66 (417)
46 3pvc_A TRNA 5-methylaminomethy 99.0 3.5E-09 1.2E-13 124.4 15.9 41 46-86 263-303 (689)
47 2e1m_B L-glutamate oxidase; L- 99.0 3.5E-11 1.2E-15 109.8 -1.1 107 281-406 3-110 (130)
48 3cgv_A Geranylgeranyl reductas 99.0 2E-08 6.8E-13 109.2 19.7 38 47-84 4-41 (397)
49 2qa2_A CABE, polyketide oxygen 98.9 2.5E-08 8.6E-13 112.6 19.9 40 44-83 9-48 (499)
50 1ryi_A Glycine oxidase; flavop 98.9 5.6E-09 1.9E-13 113.2 13.5 40 45-84 15-54 (382)
51 4at0_A 3-ketosteroid-delta4-5a 98.9 1.4E-08 4.8E-13 115.0 17.1 41 46-86 40-80 (510)
52 2qa1_A PGAE, polyketide oxygen 98.9 3.8E-08 1.3E-12 111.2 20.1 39 45-83 9-47 (500)
53 4hb9_A Similarities with proba 98.9 5.9E-08 2E-12 105.7 20.1 52 248-299 113-168 (412)
54 3nix_A Flavoprotein/dehydrogen 98.9 6.1E-08 2.1E-12 106.4 20.0 36 47-82 5-40 (421)
55 3fmw_A Oxygenase; mithramycin, 98.9 3.3E-08 1.1E-12 113.4 18.3 38 46-83 48-85 (570)
56 2uzz_A N-methyl-L-tryptophan o 98.9 2.5E-08 8.5E-13 107.6 15.9 39 47-85 2-40 (372)
57 2oln_A NIKD protein; flavoprot 98.8 5.2E-08 1.8E-12 106.2 18.0 50 247-296 157-207 (397)
58 1y56_B Sarcosine oxidase; dehy 98.8 2.1E-08 7.1E-13 108.7 14.7 42 256-297 163-205 (382)
59 2gag_B Heterotetrameric sarcos 98.8 1.3E-08 4.6E-13 111.0 12.7 38 46-84 20-59 (405)
60 2gqf_A Hypothetical protein HI 98.8 1.9E-08 6.5E-13 110.4 13.3 40 47-86 4-43 (401)
61 3i3l_A Alkylhalidase CMLS; fla 98.8 2.4E-08 8.3E-13 114.9 14.5 37 47-83 23-59 (591)
62 3e1t_A Halogenase; flavoprotei 98.8 1.1E-07 3.8E-12 107.7 19.4 36 47-82 7-42 (512)
63 2vou_A 2,6-dihydroxypyridine h 98.8 1.9E-08 6.6E-13 109.9 12.0 44 255-298 110-154 (397)
64 1qo8_A Flavocytochrome C3 fuma 98.8 1.1E-07 3.8E-12 109.1 18.5 41 46-86 120-160 (566)
65 2i0z_A NAD(FAD)-utilizing dehy 98.8 1.7E-08 5.7E-13 112.5 11.1 41 46-86 25-65 (447)
66 1y0p_A Fumarate reductase flav 98.8 1.5E-07 5.2E-12 108.0 19.4 40 47-86 126-165 (571)
67 4a9w_A Monooxygenase; baeyer-v 98.7 2.1E-08 7.3E-13 106.8 9.6 40 47-86 3-42 (357)
68 4ap3_A Steroid monooxygenase; 98.7 2.2E-08 7.6E-13 114.3 9.9 48 46-93 20-67 (549)
69 1w4x_A Phenylacetone monooxyge 98.7 6.5E-08 2.2E-12 110.4 12.5 42 47-88 16-57 (542)
70 2xdo_A TETX2 protein; tetracyc 98.7 5.2E-08 1.8E-12 106.6 11.2 53 247-299 128-184 (398)
71 3gwf_A Cyclohexanone monooxyge 98.7 4.4E-08 1.5E-12 111.7 11.0 47 47-93 8-55 (540)
72 3nlc_A Uncharacterized protein 98.6 4.6E-08 1.6E-12 111.2 9.1 42 46-87 106-147 (549)
73 3da1_A Glycerol-3-phosphate de 98.6 6.8E-08 2.3E-12 110.6 10.2 40 47-86 18-57 (561)
74 2x3n_A Probable FAD-dependent 98.6 1.1E-07 3.8E-12 103.8 10.7 43 256-298 122-167 (399)
75 1pj5_A N,N-dimethylglycine oxi 98.6 1.5E-07 5.1E-12 113.0 12.5 36 47-82 4-40 (830)
76 2gv8_A Monooxygenase; FMO, FAD 98.6 1.3E-07 4.4E-12 105.2 10.6 40 47-86 6-47 (447)
77 2zbw_A Thioredoxin reductase; 98.6 8.9E-08 3E-12 101.6 8.7 40 47-86 5-44 (335)
78 3c96_A Flavin-containing monoo 98.6 2.1E-07 7.1E-12 102.1 11.5 37 47-83 4-41 (410)
79 3f8d_A Thioredoxin reductase ( 98.5 1.6E-07 5.5E-12 98.6 10.0 39 47-87 15-53 (323)
80 1d4d_A Flavocytochrome C fumar 98.5 1.4E-06 4.7E-11 100.0 18.0 40 47-86 126-165 (572)
81 3uox_A Otemo; baeyer-villiger 98.5 2E-07 7E-12 106.3 10.5 42 47-88 9-50 (545)
82 3fpz_A Thiazole biosynthetic e 98.4 1.1E-07 3.6E-12 101.3 3.7 41 48-88 66-108 (326)
83 2wdq_A Succinate dehydrogenase 98.3 6.4E-06 2.2E-10 94.7 17.4 39 47-85 7-45 (588)
84 2r0c_A REBC; flavin adenine di 98.3 4.7E-07 1.6E-11 103.5 7.0 37 47-83 26-62 (549)
85 2h88_A Succinate dehydrogenase 98.3 1.1E-05 3.8E-10 93.1 17.6 39 47-85 18-56 (621)
86 4gcm_A TRXR, thioredoxin reduc 98.3 4.2E-07 1.4E-11 95.6 4.8 40 47-87 6-45 (312)
87 4fk1_A Putative thioredoxin re 98.2 5.8E-07 2E-11 94.3 4.9 39 46-85 5-43 (304)
88 4a5l_A Thioredoxin reductase; 98.2 6.8E-07 2.3E-11 93.8 4.1 38 46-84 3-40 (314)
89 3itj_A Thioredoxin reductase 1 98.2 7.4E-07 2.5E-11 94.2 3.7 44 45-88 20-67 (338)
90 3ab1_A Ferredoxin--NADP reduct 98.1 1.4E-06 4.7E-11 93.6 4.3 42 46-87 13-54 (360)
91 3o0h_A Glutathione reductase; 98.1 1.6E-06 5.4E-11 97.4 4.5 40 47-87 26-65 (484)
92 1c0p_A D-amino acid oxidase; a 98.1 2.5E-06 8.5E-11 91.7 5.8 37 46-82 5-41 (363)
93 3lzw_A Ferredoxin--NADP reduct 98.1 1.7E-06 5.7E-11 91.3 4.2 40 47-86 7-46 (332)
94 3cty_A Thioredoxin reductase; 98.1 1.9E-06 6.4E-11 90.8 4.5 41 46-87 15-55 (319)
95 3urh_A Dihydrolipoyl dehydroge 98.1 1.9E-06 6.5E-11 96.9 4.7 41 47-87 25-65 (491)
96 1rp0_A ARA6, thiazole biosynth 98.1 2E-06 7E-11 89.5 4.4 39 48-86 40-79 (284)
97 3r9u_A Thioredoxin reductase; 98.1 1.7E-06 5.9E-11 90.4 3.8 41 46-87 3-44 (315)
98 3qfa_A Thioredoxin reductase 1 98.1 2.4E-06 8.1E-11 96.9 5.2 55 23-80 11-65 (519)
99 2vdc_G Glutamate synthase [NAD 98.0 3.3E-06 1.1E-10 94.1 5.9 41 46-86 121-161 (456)
100 3jsk_A Cypbp37 protein; octame 98.0 2.2E-06 7.7E-11 91.2 3.9 41 47-87 79-121 (344)
101 4dna_A Probable glutathione re 98.0 2.3E-06 8E-11 95.4 4.2 40 47-87 5-44 (463)
102 1mo9_A ORF3; nucleotide bindin 98.0 4.1E-06 1.4E-10 95.0 5.8 41 46-86 42-82 (523)
103 2qae_A Lipoamide, dihydrolipoy 98.0 3.1E-06 1E-10 94.6 4.5 41 47-87 2-42 (468)
104 2q7v_A Thioredoxin reductase; 98.0 3.4E-06 1.2E-10 89.0 4.7 40 47-87 8-47 (325)
105 3g3e_A D-amino-acid oxidase; F 98.0 2.8E-06 9.5E-11 90.9 3.8 37 48-84 1-43 (351)
106 3l8k_A Dihydrolipoyl dehydroge 98.0 2.9E-06 9.9E-11 94.8 4.0 41 47-87 4-44 (466)
107 1dxl_A Dihydrolipoamide dehydr 98.0 4.6E-06 1.6E-10 93.1 5.0 41 46-86 5-45 (470)
108 3lad_A Dihydrolipoamide dehydr 98.0 4.9E-06 1.7E-10 93.1 5.3 40 47-86 3-42 (476)
109 3k30_A Histamine dehydrogenase 97.9 4.5E-06 1.5E-10 97.9 5.1 44 45-88 389-432 (690)
110 3alj_A 2-methyl-3-hydroxypyrid 97.9 5.4E-06 1.9E-10 89.7 5.3 38 47-84 11-48 (379)
111 3dk9_A Grase, GR, glutathione 97.9 3.6E-06 1.2E-10 94.3 3.7 40 46-86 19-58 (478)
112 3fbs_A Oxidoreductase; structu 97.9 6.6E-06 2.3E-10 85.1 5.4 37 47-83 2-38 (297)
113 2q0l_A TRXR, thioredoxin reduc 97.9 5.7E-06 1.9E-10 86.6 4.7 39 48-87 2-41 (311)
114 2qcu_A Aerobic glycerol-3-phos 97.9 6.3E-06 2.1E-10 93.0 5.2 37 47-83 3-39 (501)
115 3d1c_A Flavin-containing putat 97.9 5.4E-06 1.8E-10 88.9 4.3 40 47-87 4-44 (369)
116 2yqu_A 2-oxoglutarate dehydrog 97.9 5.5E-06 1.9E-10 92.2 4.3 40 48-87 2-41 (455)
117 2gjc_A Thiazole biosynthetic e 97.9 5.6E-06 1.9E-10 87.6 4.1 39 48-86 66-106 (326)
118 3c4n_A Uncharacterized protein 97.9 5.3E-06 1.8E-10 90.8 3.9 37 47-83 36-74 (405)
119 3axb_A Putative oxidoreductase 97.9 4.9E-06 1.7E-10 92.2 3.5 38 47-84 23-61 (448)
120 2a87_A TRXR, TR, thioredoxin r 97.9 7.1E-06 2.4E-10 87.1 4.5 40 46-86 13-52 (335)
121 2cul_A Glucose-inhibited divis 97.9 9.6E-06 3.3E-10 81.7 5.2 34 47-80 3-36 (232)
122 2rgh_A Alpha-glycerophosphate 97.9 8.5E-06 2.9E-10 93.4 5.3 38 47-84 32-69 (571)
123 1k0i_A P-hydroxybenzoate hydro 97.9 7.8E-06 2.7E-10 88.8 4.6 36 47-82 2-37 (394)
124 1zmd_A Dihydrolipoyl dehydroge 97.9 6E-06 2E-10 92.4 3.8 40 47-86 6-45 (474)
125 1v59_A Dihydrolipoamide dehydr 97.9 6.1E-06 2.1E-10 92.4 3.8 40 47-86 5-44 (478)
126 3c4a_A Probable tryptophan hyd 97.9 9.1E-06 3.1E-10 88.1 5.1 35 48-82 1-37 (381)
127 2bry_A NEDD9 interacting prote 97.8 1.2E-05 4E-10 90.6 6.0 39 46-84 91-129 (497)
128 3dgz_A Thioredoxin reductase 2 97.8 7.7E-06 2.6E-10 91.9 4.3 32 47-78 6-37 (488)
129 1o94_A Tmadh, trimethylamine d 97.8 1E-05 3.6E-10 95.4 5.6 43 46-88 388-430 (729)
130 1ojt_A Surface protein; redox- 97.8 6.3E-06 2.2E-10 92.4 3.6 40 47-86 6-45 (482)
131 1zk7_A HGII, reductase, mercur 97.8 9.7E-06 3.3E-10 90.5 5.0 40 47-87 4-43 (467)
132 2gmh_A Electron transfer flavo 97.8 8.1E-06 2.8E-10 93.8 4.4 39 47-85 35-79 (584)
133 2xve_A Flavin-containing monoo 97.8 1E-05 3.5E-10 90.3 5.1 40 48-87 3-48 (464)
134 1vdc_A NTR, NADPH dependent th 97.8 7.9E-06 2.7E-10 86.4 3.9 39 47-85 8-50 (333)
135 3ihm_A Styrene monooxygenase A 97.8 1.1E-05 3.8E-10 89.1 5.0 34 47-80 22-55 (430)
136 2r9z_A Glutathione amide reduc 97.8 9.5E-06 3.3E-10 90.5 4.4 39 47-86 4-42 (463)
137 1fec_A Trypanothione reductase 97.8 9.4E-06 3.2E-10 91.3 4.1 40 47-86 3-51 (490)
138 1lvl_A Dihydrolipoamide dehydr 97.8 8.4E-06 2.9E-10 90.8 3.6 40 47-87 5-44 (458)
139 3atr_A Conserved archaeal prot 97.8 9.2E-06 3.1E-10 90.3 3.9 36 47-82 6-41 (453)
140 2hqm_A GR, grase, glutathione 97.8 9E-06 3.1E-10 91.1 3.9 39 47-86 11-49 (479)
141 3ic9_A Dihydrolipoamide dehydr 97.8 8.9E-06 3E-10 91.5 3.8 39 47-86 8-46 (492)
142 1trb_A Thioredoxin reductase; 97.8 9.2E-06 3.1E-10 85.3 3.6 39 47-86 5-43 (320)
143 1ges_A Glutathione reductase; 97.8 9.3E-06 3.2E-10 90.2 3.7 40 47-87 4-43 (450)
144 1ebd_A E3BD, dihydrolipoamide 97.8 1.1E-05 3.8E-10 89.7 4.1 39 47-86 3-41 (455)
145 2wpf_A Trypanothione reductase 97.8 8.8E-06 3E-10 91.6 3.1 40 47-86 7-55 (495)
146 3dgh_A TRXR-1, thioredoxin red 97.8 1.5E-05 5E-10 89.4 4.8 33 46-78 8-40 (483)
147 2ywl_A Thioredoxin reductase r 97.8 2.1E-05 7E-10 75.6 5.2 33 48-80 2-34 (180)
148 1xdi_A RV3303C-LPDA; reductase 97.8 8.8E-06 3E-10 91.7 3.0 40 47-87 2-44 (499)
149 2bs2_A Quinol-fumarate reducta 97.7 1.3E-05 4.4E-10 93.3 4.3 39 47-85 5-43 (660)
150 3pl8_A Pyranose 2-oxidase; sub 97.7 1.6E-05 5.3E-10 92.1 4.9 40 47-86 46-85 (623)
151 1fl2_A Alkyl hydroperoxide red 97.7 1.6E-05 5.6E-10 83.0 4.3 37 48-86 2-38 (310)
152 1onf_A GR, grase, glutathione 97.7 1.7E-05 5.7E-10 89.5 4.5 40 47-87 2-41 (500)
153 1chu_A Protein (L-aspartate ox 97.7 1.7E-05 5.7E-10 90.3 4.5 38 47-85 8-45 (540)
154 1ps9_A 2,4-dienoyl-COA reducta 97.7 2.5E-05 8.5E-10 91.3 6.1 43 45-87 371-413 (671)
155 2a8x_A Dihydrolipoyl dehydroge 97.7 1.6E-05 5.4E-10 88.7 4.0 38 48-86 4-41 (464)
156 2aqj_A Tryptophan halogenase, 97.7 2.5E-05 8.6E-10 88.8 5.3 34 47-80 5-41 (538)
157 3s5w_A L-ornithine 5-monooxyge 97.7 1.7E-05 5.8E-10 88.2 3.6 37 47-83 30-71 (463)
158 2dkh_A 3-hydroxybenzoate hydro 97.7 2.6E-05 9E-10 90.6 5.3 37 47-83 32-69 (639)
159 2eq6_A Pyruvate dehydrogenase 97.6 2E-05 6.7E-10 88.0 3.8 39 47-86 6-44 (464)
160 2e5v_A L-aspartate oxidase; ar 97.6 3E-05 1E-09 86.7 5.1 36 49-85 1-36 (472)
161 3g5s_A Methylenetetrahydrofola 97.6 3.8E-05 1.3E-09 82.6 5.6 39 47-85 1-39 (443)
162 2zxi_A TRNA uridine 5-carboxym 97.6 3.1E-05 1.1E-09 88.7 5.1 37 47-83 27-64 (637)
163 2weu_A Tryptophan 5-halogenase 97.6 2.6E-05 9.1E-10 87.9 4.5 34 47-80 2-38 (511)
164 3cp8_A TRNA uridine 5-carboxym 97.6 3.5E-05 1.2E-09 88.5 4.8 38 47-84 21-59 (641)
165 1y56_A Hypothetical protein PH 97.6 1.9E-05 6.5E-10 88.9 2.5 40 47-87 108-147 (493)
166 1gte_A Dihydropyrimidine dehyd 97.6 3.7E-05 1.2E-09 94.1 5.2 40 47-86 187-227 (1025)
167 3h8l_A NADH oxidase; membrane 97.6 3.2E-05 1.1E-09 84.6 4.3 38 48-85 2-42 (409)
168 1kf6_A Fumarate reductase flav 97.6 3.5E-05 1.2E-09 88.8 4.7 39 47-85 5-45 (602)
169 2pyx_A Tryptophan halogenase; 97.6 4.4E-05 1.5E-09 86.6 5.5 35 47-81 7-53 (526)
170 2e4g_A Tryptophan halogenase; 97.6 4.7E-05 1.6E-09 86.8 5.7 34 47-80 25-61 (550)
171 2gag_A Heterotetrameric sarcos 97.6 3.4E-05 1.2E-09 93.8 4.5 41 47-87 128-168 (965)
172 1lqt_A FPRA; NADP+ derivative, 97.5 3E-05 1E-09 86.4 3.3 41 47-87 3-50 (456)
173 3oc4_A Oxidoreductase, pyridin 97.5 4.2E-05 1.4E-09 84.9 4.6 36 48-83 3-40 (452)
174 3ces_A MNMG, tRNA uridine 5-ca 97.5 4.3E-05 1.5E-09 87.8 4.7 37 47-83 28-65 (651)
175 3h28_A Sulfide-quinone reducta 97.5 4.3E-05 1.5E-09 84.2 4.6 38 48-85 3-42 (430)
176 3kd9_A Coenzyme A disulfide re 97.5 4.8E-05 1.6E-09 84.3 4.9 37 47-83 3-41 (449)
177 3fg2_P Putative rubredoxin red 97.5 6E-05 2.1E-09 82.3 5.6 37 48-84 2-40 (404)
178 3iwa_A FAD-dependent pyridine 97.5 3.7E-05 1.3E-09 85.9 3.8 36 48-83 4-41 (472)
179 3ics_A Coenzyme A-disulfide re 97.5 5E-05 1.7E-09 87.2 5.0 38 46-83 35-74 (588)
180 1hyu_A AHPF, alkyl hydroperoxi 97.5 4.8E-05 1.6E-09 86.1 4.7 39 46-86 211-249 (521)
181 1cjc_A Protein (adrenodoxin re 97.5 4.3E-05 1.5E-09 85.2 4.0 41 47-87 6-48 (460)
182 3gyx_A Adenylylsulfate reducta 97.5 4.7E-05 1.6E-09 88.5 4.5 37 47-83 22-64 (662)
183 3lxd_A FAD-dependent pyridine 97.5 5.6E-05 1.9E-09 82.8 4.9 38 47-84 9-48 (415)
184 1jnr_A Adenylylsulfate reducta 97.5 6.3E-05 2.1E-09 87.4 4.9 35 47-81 22-60 (643)
185 3cgb_A Pyridine nucleotide-dis 97.5 6.4E-05 2.2E-09 84.2 4.7 37 47-83 36-74 (480)
186 2x8g_A Thioredoxin glutathione 97.5 6.8E-05 2.3E-09 86.4 5.0 33 46-78 106-138 (598)
187 4b1b_A TRXR, thioredoxin reduc 97.4 7.3E-05 2.5E-09 84.9 4.1 33 48-80 43-75 (542)
188 3ntd_A FAD-dependent pyridine 97.4 9E-05 3.1E-09 84.6 4.7 36 48-83 2-39 (565)
189 3ef6_A Toluene 1,2-dioxygenase 97.4 0.00012 4.2E-09 80.1 5.6 37 48-84 3-41 (410)
190 2cdu_A NADPH oxidase; flavoenz 97.4 9.7E-05 3.3E-09 81.9 4.8 36 48-83 1-38 (452)
191 1pn0_A Phenol 2-monooxygenase; 97.4 0.0001 3.5E-09 85.9 4.8 36 47-82 8-48 (665)
192 1nhp_A NADH peroxidase; oxidor 97.3 0.00011 3.7E-09 81.4 4.7 36 48-83 1-38 (447)
193 2v3a_A Rubredoxin reductase; a 97.3 0.00054 1.8E-08 74.1 10.1 41 255-295 200-241 (384)
194 1m6i_A Programmed cell death p 97.3 0.00011 3.6E-09 82.7 4.3 38 46-83 10-49 (493)
195 1kdg_A CDH, cellobiose dehydro 97.3 0.00014 4.9E-09 82.7 5.2 37 46-82 6-42 (546)
196 3klj_A NAD(FAD)-dependent dehy 97.3 0.00014 4.8E-09 79.0 4.6 38 46-83 8-45 (385)
197 2gqw_A Ferredoxin reductase; f 97.3 0.00017 5.9E-09 78.8 5.3 36 47-82 7-44 (408)
198 2v3a_A Rubredoxin reductase; a 97.3 0.0002 6.9E-09 77.5 5.5 34 47-80 4-39 (384)
199 3t37_A Probable dehydrogenase; 97.3 0.00013 4.3E-09 82.5 4.0 35 47-81 17-52 (526)
200 1q1r_A Putidaredoxin reductase 97.3 0.0002 7E-09 78.9 5.5 37 47-83 4-42 (431)
201 2yqu_A 2-oxoglutarate dehydrog 97.2 0.0018 6.3E-08 71.6 12.8 42 255-296 221-263 (455)
202 2bc0_A NADH oxidase; flavoprot 97.2 0.00016 5.6E-09 81.1 4.0 37 47-83 35-74 (490)
203 3sx6_A Sulfide-quinone reducta 97.2 0.00018 6.2E-09 79.4 4.2 35 47-81 4-41 (437)
204 1xhc_A NADH oxidase /nitrite r 97.1 0.00023 7.9E-09 76.7 4.3 33 48-81 9-41 (367)
205 4eqs_A Coenzyme A disulfide re 97.1 0.00026 8.9E-09 78.2 4.4 36 48-83 1-38 (437)
206 2eq6_A Pyruvate dehydrogenase 97.1 0.0013 4.5E-08 73.1 10.2 35 48-82 170-204 (464)
207 1ju2_A HydroxynitrIle lyase; f 97.1 0.00019 6.3E-09 81.6 3.1 36 47-83 26-61 (536)
208 1ges_A Glutathione reductase; 97.0 0.002 6.9E-08 71.3 10.7 35 48-82 168-202 (450)
209 1n4w_A CHOD, cholesterol oxida 97.0 0.00039 1.3E-08 78.3 4.9 37 47-83 5-41 (504)
210 2r9z_A Glutathione amide reduc 97.0 0.0039 1.3E-07 69.2 12.8 41 255-295 220-262 (463)
211 3q9t_A Choline dehydrogenase a 97.0 0.00036 1.2E-08 79.8 4.3 35 47-81 6-41 (577)
212 4g6h_A Rotenone-insensitive NA 97.0 0.00035 1.2E-08 78.6 4.2 36 46-81 41-76 (502)
213 3vrd_B FCCB subunit, flavocyto 97.0 0.0004 1.4E-08 75.5 4.4 34 48-81 3-38 (401)
214 1coy_A Cholesterol oxidase; ox 96.9 0.00059 2E-08 76.9 5.4 37 46-82 10-46 (507)
215 3hyw_A Sulfide-quinone reducta 96.9 0.00056 1.9E-08 75.3 4.5 34 48-81 3-38 (430)
216 3qvp_A Glucose oxidase; oxidor 96.9 0.00045 1.5E-08 79.0 3.5 35 46-80 18-53 (583)
217 3ic9_A Dihydrolipoamide dehydr 96.8 0.0044 1.5E-07 69.4 11.3 35 48-82 175-209 (492)
218 1v59_A Dihydrolipoamide dehydr 96.8 0.0041 1.4E-07 69.2 11.0 36 48-83 184-219 (478)
219 2hqm_A GR, grase, glutathione 96.8 0.0092 3.2E-07 66.5 13.2 35 48-82 186-220 (479)
220 3ef6_A Toluene 1,2-dioxygenase 96.7 0.0031 1.1E-07 68.8 8.7 42 255-296 198-240 (410)
221 1gpe_A Protein (glucose oxidas 96.7 0.0011 3.9E-08 75.9 5.3 37 46-82 23-60 (587)
222 3lxd_A FAD-dependent pyridine 96.7 0.0036 1.2E-07 68.3 9.0 41 255-295 207-249 (415)
223 1xdi_A RV3303C-LPDA; reductase 96.7 0.011 3.8E-07 66.1 13.1 42 255-296 236-278 (499)
224 3o0h_A Glutathione reductase; 96.6 0.012 4.1E-07 65.6 13.0 41 255-295 245-286 (484)
225 3fim_B ARYL-alcohol oxidase; A 96.6 0.00061 2.1E-08 77.7 2.5 36 47-82 2-38 (566)
226 2jbv_A Choline oxidase; alcoho 96.6 0.00089 3E-08 76.1 3.8 36 47-82 13-49 (546)
227 3oc4_A Oxidoreductase, pyridin 96.5 0.0059 2E-07 67.4 9.7 41 255-295 202-242 (452)
228 3fg2_P Putative rubredoxin red 96.5 0.0044 1.5E-07 67.4 8.5 40 256-295 198-239 (404)
229 4b63_A L-ornithine N5 monooxyg 96.5 0.00051 1.7E-08 77.3 0.8 40 45-84 37-76 (501)
230 1zk7_A HGII, reductase, mercur 96.5 0.0093 3.2E-07 66.1 11.0 42 255-296 229-270 (467)
231 1mo9_A ORF3; nucleotide bindin 96.5 0.015 5E-07 65.7 12.5 35 48-82 215-249 (523)
232 3iwa_A FAD-dependent pyridine 96.4 0.016 5.6E-07 64.2 12.4 40 256-295 216-256 (472)
233 2wpf_A Trypanothione reductase 96.3 0.019 6.5E-07 64.2 12.4 41 255-295 248-290 (495)
234 3lad_A Dihydrolipoamide dehydr 96.2 0.033 1.1E-06 61.8 13.1 35 48-82 181-215 (476)
235 1m6i_A Programmed cell death p 95.9 0.019 6.4E-07 64.2 9.7 42 255-296 239-281 (493)
236 4b1b_A TRXR, thioredoxin reduc 95.4 0.083 2.8E-06 59.7 12.2 40 255-294 276-316 (542)
237 1nhp_A NADH peroxidase; oxidor 95.3 0.013 4.5E-07 64.5 5.3 37 47-83 149-185 (447)
238 3klj_A NAD(FAD)-dependent dehy 95.1 0.013 4.4E-07 63.4 4.4 36 48-83 147-182 (385)
239 4gcm_A TRXR, thioredoxin reduc 95.0 0.016 5.6E-07 60.1 4.6 35 48-82 146-180 (312)
240 3fwz_A Inner membrane protein 94.8 0.042 1.4E-06 50.1 6.3 34 47-80 7-40 (140)
241 1lvl_A Dihydrolipoamide dehydr 94.6 0.022 7.4E-07 63.0 4.5 35 48-82 172-206 (458)
242 1lss_A TRK system potassium up 94.5 0.036 1.2E-06 49.8 5.1 33 48-80 5-37 (140)
243 1ebd_A E3BD, dihydrolipoamide 94.5 0.03 1E-06 61.8 5.3 36 47-82 170-205 (455)
244 2g1u_A Hypothetical protein TM 94.4 0.043 1.5E-06 50.9 5.3 34 47-80 19-52 (155)
245 1xhc_A NADH oxidase /nitrite r 94.3 0.03 1E-06 59.9 4.8 35 48-82 144-178 (367)
246 3llv_A Exopolyphosphatase-rela 94.2 0.053 1.8E-06 49.2 5.4 33 48-80 7-39 (141)
247 4a5l_A Thioredoxin reductase; 94.1 0.034 1.2E-06 57.4 4.5 34 47-80 152-185 (314)
248 2gqw_A Ferredoxin reductase; f 94.0 0.045 1.5E-06 59.4 5.3 37 47-83 145-181 (408)
249 3ic5_A Putative saccharopine d 93.8 0.053 1.8E-06 47.1 4.6 33 48-80 6-39 (118)
250 2x5o_A UDP-N-acetylmuramoylala 93.6 0.05 1.7E-06 59.9 4.8 35 48-82 6-40 (439)
251 3lk7_A UDP-N-acetylmuramoylala 93.5 0.052 1.8E-06 59.9 4.8 34 47-80 9-42 (451)
252 3cgb_A Pyridine nucleotide-dis 93.5 0.046 1.6E-06 60.7 4.4 37 47-83 186-222 (480)
253 2bc0_A NADH oxidase; flavoprot 93.4 0.067 2.3E-06 59.6 5.6 35 48-82 195-229 (490)
254 1zmd_A Dihydrolipoyl dehydroge 93.2 0.065 2.2E-06 59.3 5.1 36 48-83 179-214 (474)
255 1ojt_A Surface protein; redox- 93.2 0.06 2.1E-06 59.8 4.7 35 48-82 186-220 (482)
256 1id1_A Putative potassium chan 93.1 0.11 3.8E-06 47.9 5.7 33 48-80 4-36 (153)
257 2a8x_A Dihydrolipoyl dehydroge 93.1 0.072 2.5E-06 58.8 5.1 35 48-82 172-206 (464)
258 1f0y_A HCDH, L-3-hydroxyacyl-C 93.0 0.089 3.1E-06 54.6 5.5 33 47-79 15-47 (302)
259 2hmt_A YUAA protein; RCK, KTN, 93.0 0.088 3E-06 47.4 4.8 33 48-80 7-39 (144)
260 1q1r_A Putidaredoxin reductase 93.0 0.075 2.6E-06 58.2 5.1 35 48-82 150-184 (431)
261 3d1c_A Flavin-containing putat 92.9 0.078 2.7E-06 56.1 4.9 34 48-81 167-200 (369)
262 4eqs_A Coenzyme A disulfide re 92.8 0.081 2.8E-06 58.0 5.0 35 48-82 148-182 (437)
263 3kd9_A Coenzyme A disulfide re 92.8 0.097 3.3E-06 57.5 5.6 35 48-82 149-183 (449)
264 2q0l_A TRXR, thioredoxin reduc 92.7 0.094 3.2E-06 54.0 5.0 34 48-81 144-177 (311)
265 3ado_A Lambda-crystallin; L-gu 92.6 0.099 3.4E-06 54.8 5.1 33 48-80 7-39 (319)
266 3c85_A Putative glutathione-re 92.6 0.1 3.6E-06 49.6 4.9 34 47-80 39-73 (183)
267 1dxl_A Dihydrolipoamide dehydr 92.5 0.066 2.2E-06 59.2 3.7 36 47-82 177-212 (470)
268 1onf_A GR, grase, glutathione 92.4 0.094 3.2E-06 58.6 4.9 36 47-82 176-211 (500)
269 2cdu_A NADPH oxidase; flavoenz 92.2 0.11 3.7E-06 57.2 5.0 35 48-82 150-184 (452)
270 3l4b_C TRKA K+ channel protien 92.2 0.13 4.4E-06 50.5 5.1 33 48-80 1-33 (218)
271 2qae_A Lipoamide, dihydrolipoy 92.2 0.11 3.8E-06 57.3 5.1 35 48-82 175-209 (468)
272 1fl2_A Alkyl hydroperoxide red 92.0 0.11 3.8E-06 53.5 4.6 34 48-81 145-178 (310)
273 2xve_A Flavin-containing monoo 91.7 0.13 4.6E-06 56.8 5.1 36 47-82 197-232 (464)
274 1vdc_A NTR, NADPH dependent th 91.7 0.12 4.1E-06 53.8 4.5 34 48-81 160-193 (333)
275 1lld_A L-lactate dehydrogenase 91.6 0.14 4.9E-06 53.3 5.0 35 46-80 6-42 (319)
276 3ntd_A FAD-dependent pyridine 91.5 0.15 5E-06 57.8 5.3 35 48-82 152-186 (565)
277 3gwf_A Cyclohexanone monooxyge 91.5 0.13 4.4E-06 58.1 4.7 35 47-81 178-212 (540)
278 2dpo_A L-gulonate 3-dehydrogen 91.5 0.16 5.5E-06 53.3 5.1 33 48-80 7-39 (319)
279 4e12_A Diketoreductase; oxidor 91.5 0.16 5.6E-06 52.1 5.1 33 48-80 5-37 (283)
280 2a87_A TRXR, TR, thioredoxin r 91.4 0.14 4.8E-06 53.6 4.6 34 48-81 156-189 (335)
281 3urh_A Dihydrolipoyl dehydroge 91.4 0.13 4.4E-06 57.2 4.5 35 48-82 199-233 (491)
282 3dk9_A Grase, GR, glutathione 91.4 0.15 5.2E-06 56.4 5.1 35 48-82 188-222 (478)
283 2q7v_A Thioredoxin reductase; 91.3 0.14 4.9E-06 53.1 4.6 34 48-81 153-186 (325)
284 1trb_A Thioredoxin reductase; 91.3 0.14 4.9E-06 52.8 4.5 34 48-81 146-179 (320)
285 3l8k_A Dihydrolipoyl dehydroge 91.3 0.16 5.5E-06 56.1 5.1 35 48-82 173-207 (466)
286 4dio_A NAD(P) transhydrogenase 91.2 0.18 6.2E-06 54.5 5.3 33 48-80 191-223 (405)
287 3eag_A UDP-N-acetylmuramate:L- 91.2 0.19 6.4E-06 52.9 5.3 35 47-81 4-39 (326)
288 3uox_A Otemo; baeyer-villiger 91.1 0.17 5.8E-06 57.2 5.2 35 47-81 185-219 (545)
289 3i83_A 2-dehydropantoate 2-red 91.1 0.18 6.1E-06 52.8 5.0 33 48-80 3-35 (320)
290 3k6j_A Protein F01G10.3, confi 91.1 0.26 8.8E-06 54.3 6.4 35 47-81 54-88 (460)
291 1kyq_A Met8P, siroheme biosynt 91.1 0.13 4.6E-06 52.5 3.9 34 47-80 13-46 (274)
292 1ks9_A KPA reductase;, 2-dehyd 91.0 0.2 6.8E-06 51.2 5.1 34 48-81 1-34 (291)
293 1zej_A HBD-9, 3-hydroxyacyl-CO 90.9 0.19 6.4E-06 52.1 4.8 33 47-80 12-44 (293)
294 2zbw_A Thioredoxin reductase; 90.9 0.14 4.9E-06 53.2 4.0 34 48-81 153-186 (335)
295 4ap3_A Steroid monooxygenase; 90.8 0.16 5.5E-06 57.4 4.7 35 47-81 191-225 (549)
296 2raf_A Putative dinucleotide-b 90.8 0.23 7.8E-06 48.6 5.1 35 47-81 19-53 (209)
297 2ew2_A 2-dehydropantoate 2-red 90.8 0.19 6.6E-06 51.9 4.9 32 48-79 4-35 (316)
298 2gv8_A Monooxygenase; FMO, FAD 90.8 0.18 6.3E-06 55.2 4.9 36 47-82 212-248 (447)
299 3dfz_A SIRC, precorrin-2 dehyd 90.8 0.2 6.8E-06 49.7 4.6 34 47-80 31-64 (223)
300 3itj_A Thioredoxin reductase 1 90.7 0.17 5.9E-06 52.4 4.5 34 48-81 174-207 (338)
301 3doj_A AT3G25530, dehydrogenas 90.6 0.22 7.7E-06 51.8 5.2 35 46-80 20-54 (310)
302 2y0c_A BCEC, UDP-glucose dehyd 90.6 0.2 6.9E-06 55.6 5.0 34 47-80 8-41 (478)
303 3s5w_A L-ornithine 5-monooxyge 90.5 0.14 4.7E-06 56.3 3.7 36 47-82 227-264 (463)
304 2qrj_A Saccharopine dehydrogen 90.5 0.37 1.3E-05 51.7 6.8 39 47-85 214-257 (394)
305 1fec_A Trypanothione reductase 90.5 0.18 6.3E-06 56.0 4.7 35 48-82 188-225 (490)
306 3hn2_A 2-dehydropantoate 2-red 90.4 0.19 6.3E-06 52.5 4.4 33 48-80 3-35 (312)
307 1pzg_A LDH, lactate dehydrogen 90.4 0.25 8.5E-06 52.1 5.3 34 47-80 9-43 (331)
308 3cty_A Thioredoxin reductase; 90.4 0.17 5.8E-06 52.4 4.0 34 48-81 156-189 (319)
309 3p2y_A Alanine dehydrogenase/p 90.3 0.19 6.6E-06 53.7 4.4 33 48-80 185-217 (381)
310 3ics_A Coenzyme A-disulfide re 90.1 0.25 8.4E-06 56.3 5.4 35 48-82 188-222 (588)
311 2x8g_A Thioredoxin glutathione 89.9 0.27 9.3E-06 56.1 5.5 32 48-79 287-318 (598)
312 1zcj_A Peroxisomal bifunctiona 89.9 0.32 1.1E-05 53.7 5.9 34 47-80 37-70 (463)
313 2gmh_A Electron transfer flavo 89.8 5.7 0.00019 45.0 16.5 37 454-490 347-386 (584)
314 3ghy_A Ketopantoate reductase 89.8 0.29 9.8E-06 51.5 5.3 32 48-79 4-35 (335)
315 2dkh_A 3-hydroxybenzoate hydro 89.6 8.5 0.00029 44.0 17.9 38 453-490 341-381 (639)
316 2vdc_G Glutamate synthase [NAD 89.6 0.32 1.1E-05 53.6 5.6 38 454-493 410-447 (456)
317 3ab1_A Ferredoxin--NADP reduct 89.5 0.22 7.4E-06 52.6 4.0 34 48-81 164-197 (360)
318 3r9u_A Thioredoxin reductase; 89.4 0.31 1.1E-05 49.9 5.1 35 48-82 148-182 (315)
319 3f8d_A Thioredoxin reductase ( 89.4 0.28 9.5E-06 50.4 4.7 34 48-81 155-188 (323)
320 2ewd_A Lactate dehydrogenase,; 89.4 0.3 1E-05 51.1 4.9 34 47-80 4-38 (317)
321 2a9f_A Putative malic enzyme ( 89.4 0.28 9.5E-06 52.5 4.7 33 47-79 188-221 (398)
322 1hyu_A AHPF, alkyl hydroperoxi 89.4 0.22 7.6E-06 55.8 4.2 34 48-81 356-389 (521)
323 3hwr_A 2-dehydropantoate 2-red 89.2 0.31 1.1E-05 51.0 4.9 32 47-79 19-50 (318)
324 3gg2_A Sugar dehydrogenase, UD 89.2 0.29 9.9E-06 53.9 4.9 33 48-80 3-35 (450)
325 3g17_A Similar to 2-dehydropan 89.1 0.26 8.8E-06 50.9 4.2 33 48-80 3-35 (294)
326 3g79_A NDP-N-acetyl-D-galactos 89.0 0.3 1E-05 54.1 4.8 34 48-81 19-54 (478)
327 3dtt_A NADP oxidoreductase; st 89.0 0.38 1.3E-05 48.2 5.2 34 47-80 19-52 (245)
328 1bg6_A N-(1-D-carboxylethyl)-L 88.8 0.34 1.2E-05 51.1 5.0 32 48-79 5-36 (359)
329 3pef_A 6-phosphogluconate dehy 88.8 0.34 1.2E-05 49.7 4.8 33 48-80 2-34 (287)
330 3g0o_A 3-hydroxyisobutyrate de 88.7 0.37 1.3E-05 49.9 5.0 33 48-80 8-40 (303)
331 3k96_A Glycerol-3-phosphate de 88.7 0.37 1.3E-05 51.3 5.1 34 47-80 29-62 (356)
332 1vl6_A Malate oxidoreductase; 88.6 0.34 1.2E-05 51.7 4.7 33 47-79 192-225 (388)
333 1z82_A Glycerol-3-phosphate de 88.5 0.37 1.3E-05 50.6 5.0 33 47-79 14-46 (335)
334 2hjr_A Malate dehydrogenase; m 88.4 0.43 1.5E-05 50.1 5.4 33 48-80 15-48 (328)
335 3dgz_A Thioredoxin reductase 2 88.4 0.41 1.4E-05 53.0 5.5 32 48-79 186-217 (488)
336 4dna_A Probable glutathione re 88.3 0.4 1.4E-05 52.8 5.2 36 47-82 170-205 (463)
337 3qfa_A Thioredoxin reductase 1 88.2 0.44 1.5E-05 53.3 5.6 32 48-79 211-242 (519)
338 2h78_A Hibadh, 3-hydroxyisobut 88.1 0.34 1.2E-05 50.0 4.3 34 47-80 3-36 (302)
339 4ffl_A PYLC; amino acid, biosy 88.1 0.45 1.5E-05 50.4 5.3 34 47-80 1-34 (363)
340 3mog_A Probable 3-hydroxybutyr 88.1 0.44 1.5E-05 52.9 5.4 33 48-80 6-38 (483)
341 1x13_A NAD(P) transhydrogenase 88.0 0.41 1.4E-05 51.8 5.0 33 48-80 173-205 (401)
342 3pdu_A 3-hydroxyisobutyrate de 88.0 0.3 1E-05 50.0 3.8 33 48-80 2-34 (287)
343 2vns_A Metalloreductase steap3 87.8 0.52 1.8E-05 46.2 5.2 34 47-80 28-61 (215)
344 3ego_A Probable 2-dehydropanto 87.7 0.44 1.5E-05 49.5 4.8 32 48-80 3-34 (307)
345 3qha_A Putative oxidoreductase 87.7 0.35 1.2E-05 49.9 4.1 34 47-80 15-48 (296)
346 3oj0_A Glutr, glutamyl-tRNA re 87.6 0.22 7.5E-06 45.3 2.2 33 48-80 22-54 (144)
347 1l7d_A Nicotinamide nucleotide 87.6 0.49 1.7E-05 50.9 5.3 33 48-80 173-205 (384)
348 4dll_A 2-hydroxy-3-oxopropiona 87.6 0.4 1.4E-05 50.1 4.5 34 47-80 31-64 (320)
349 1mv8_A GMD, GDP-mannose 6-dehy 87.5 0.36 1.2E-05 52.9 4.2 33 48-80 1-33 (436)
350 2v6b_A L-LDH, L-lactate dehydr 87.5 0.46 1.6E-05 49.4 4.8 33 48-80 1-35 (304)
351 1t2d_A LDH-P, L-lactate dehydr 87.5 0.53 1.8E-05 49.3 5.4 34 47-80 4-38 (322)
352 3pid_A UDP-glucose 6-dehydroge 87.3 0.45 1.5E-05 51.9 4.8 33 47-80 36-68 (432)
353 1pjc_A Protein (L-alanine dehy 87.3 0.54 1.8E-05 50.1 5.4 33 48-80 168-200 (361)
354 3lzw_A Ferredoxin--NADP reduct 87.3 0.38 1.3E-05 49.6 4.1 34 48-81 155-188 (332)
355 4a7p_A UDP-glucose dehydrogena 87.2 0.52 1.8E-05 51.7 5.3 34 48-81 9-42 (446)
356 1txg_A Glycerol-3-phosphate de 87.2 0.4 1.4E-05 50.1 4.2 31 48-78 1-31 (335)
357 3ggo_A Prephenate dehydrogenas 87.2 0.61 2.1E-05 48.7 5.6 33 48-80 34-68 (314)
358 3vtf_A UDP-glucose 6-dehydroge 87.1 0.49 1.7E-05 51.7 4.9 35 46-80 20-54 (444)
359 1cjc_A Protein (adrenodoxin re 86.8 0.49 1.7E-05 52.2 4.8 35 47-81 145-200 (460)
360 4huj_A Uncharacterized protein 86.8 0.38 1.3E-05 47.3 3.5 32 48-79 24-56 (220)
361 3l6d_A Putative oxidoreductase 86.7 0.61 2.1E-05 48.3 5.3 34 47-80 9-42 (306)
362 1nyt_A Shikimate 5-dehydrogena 86.6 0.61 2.1E-05 47.5 5.1 32 48-79 120-151 (271)
363 4e21_A 6-phosphogluconate dehy 86.5 0.58 2E-05 49.8 5.0 34 47-80 22-55 (358)
364 3fbs_A Oxidoreductase; structu 86.5 0.4 1.4E-05 48.6 3.7 37 454-492 258-294 (297)
365 2wtb_A MFP2, fatty acid multif 86.5 0.6 2.1E-05 54.5 5.6 34 47-80 312-345 (725)
366 3l9w_A Glutathione-regulated p 86.5 0.63 2.2E-05 50.5 5.4 34 47-80 4-37 (413)
367 3dgh_A TRXR-1, thioredoxin red 86.4 0.63 2.2E-05 51.4 5.5 32 48-79 188-219 (483)
368 1jay_A Coenzyme F420H2:NADP+ o 86.4 0.61 2.1E-05 45.2 4.8 32 48-79 1-33 (212)
369 4g65_A TRK system potassium up 86.3 0.3 1E-05 54.0 2.7 34 47-80 3-36 (461)
370 2eez_A Alanine dehydrogenase; 86.0 0.69 2.4E-05 49.4 5.4 33 48-80 167-199 (369)
371 2q3e_A UDP-glucose 6-dehydroge 85.8 0.5 1.7E-05 52.2 4.2 34 47-80 5-40 (467)
372 1guz_A Malate dehydrogenase; o 85.7 0.68 2.3E-05 48.2 5.0 33 48-80 1-35 (310)
373 1pjq_A CYSG, siroheme synthase 85.7 0.59 2E-05 51.5 4.8 33 48-80 13-45 (457)
374 1dlj_A UDP-glucose dehydrogena 85.6 0.49 1.7E-05 51.2 4.0 32 48-80 1-32 (402)
375 3qsg_A NAD-binding phosphogluc 85.5 0.56 1.9E-05 48.8 4.2 33 47-79 24-57 (312)
376 3tl2_A Malate dehydrogenase; c 85.4 0.69 2.4E-05 48.3 4.8 33 47-79 8-41 (315)
377 2uyy_A N-PAC protein; long-cha 85.4 0.87 3E-05 47.2 5.6 33 48-80 31-63 (316)
378 3phh_A Shikimate dehydrogenase 85.2 0.82 2.8E-05 46.6 5.1 34 47-80 118-151 (269)
379 1p77_A Shikimate 5-dehydrogena 85.2 0.61 2.1E-05 47.5 4.2 32 48-79 120-151 (272)
380 4ezb_A Uncharacterized conserv 85.1 0.63 2.1E-05 48.6 4.4 33 48-80 25-58 (317)
381 3zwc_A Peroxisomal bifunctiona 85.1 1.5 5.1E-05 51.2 7.9 34 47-80 316-349 (742)
382 1ur5_A Malate dehydrogenase; o 85.0 0.79 2.7E-05 47.7 5.1 33 48-80 3-36 (309)
383 3gvi_A Malate dehydrogenase; N 85.0 0.83 2.8E-05 47.9 5.2 34 47-80 7-41 (324)
384 2o3j_A UDP-glucose 6-dehydroge 84.9 0.64 2.2E-05 51.6 4.6 34 47-80 9-44 (481)
385 4a9w_A Monooxygenase; baeyer-v 84.8 0.64 2.2E-05 48.3 4.3 33 47-80 163-195 (357)
386 2vhw_A Alanine dehydrogenase; 84.7 0.87 3E-05 48.8 5.4 34 47-80 168-201 (377)
387 1o94_A Tmadh, trimethylamine d 84.6 0.67 2.3E-05 54.2 4.8 33 48-80 529-563 (729)
388 2egg_A AROE, shikimate 5-dehyd 84.6 0.8 2.7E-05 47.3 4.9 32 48-79 142-174 (297)
389 2f1k_A Prephenate dehydrogenas 84.5 0.82 2.8E-05 46.4 4.9 32 48-79 1-32 (279)
390 1yqg_A Pyrroline-5-carboxylate 84.5 0.69 2.4E-05 46.4 4.3 32 48-79 1-33 (263)
391 1wdk_A Fatty oxidation complex 84.5 0.85 2.9E-05 53.2 5.5 34 47-80 314-347 (715)
392 1y6j_A L-lactate dehydrogenase 84.5 0.8 2.7E-05 47.9 4.8 33 47-79 7-41 (318)
393 3ldh_A Lactate dehydrogenase; 84.4 1.1 3.7E-05 47.0 5.8 35 46-80 20-56 (330)
394 1a5z_A L-lactate dehydrogenase 84.2 0.7 2.4E-05 48.3 4.2 32 48-79 1-34 (319)
395 2pv7_A T-protein [includes: ch 84.2 0.92 3.1E-05 46.8 5.1 33 48-80 22-55 (298)
396 1hyh_A L-hicdh, L-2-hydroxyiso 84.1 0.73 2.5E-05 47.8 4.3 33 48-80 2-36 (309)
397 1jw9_B Molybdopterin biosynthe 84.1 0.76 2.6E-05 46.2 4.3 32 48-79 32-64 (249)
398 1evy_A Glycerol-3-phosphate de 84.0 0.49 1.7E-05 50.3 3.0 31 49-79 17-47 (366)
399 2gag_A Heterotetrameric sarcos 83.9 0.47 1.6E-05 57.4 3.1 36 48-83 285-320 (965)
400 2gf2_A Hibadh, 3-hydroxyisobut 83.9 0.81 2.8E-05 46.8 4.5 32 49-80 2-33 (296)
401 2qyt_A 2-dehydropantoate 2-red 83.8 0.58 2E-05 48.4 3.4 31 48-78 9-45 (317)
402 4id9_A Short-chain dehydrogena 83.8 0.97 3.3E-05 47.1 5.2 37 45-81 17-54 (347)
403 2g5c_A Prephenate dehydrogenas 83.7 0.99 3.4E-05 45.9 5.1 32 48-79 2-35 (281)
404 2rir_A Dipicolinate synthase, 83.7 1 3.5E-05 46.5 5.2 33 48-80 158-190 (300)
405 4gwg_A 6-phosphogluconate dehy 83.6 0.95 3.3E-05 50.1 5.2 34 47-80 4-37 (484)
406 3cky_A 2-hydroxymethyl glutara 83.5 0.81 2.8E-05 47.0 4.3 33 47-79 4-36 (301)
407 1yj8_A Glycerol-3-phosphate de 83.5 0.68 2.3E-05 49.4 3.9 34 48-81 22-62 (375)
408 3c24_A Putative oxidoreductase 83.5 0.97 3.3E-05 46.2 4.9 32 48-79 12-44 (286)
409 2cvz_A Dehydrogenase, 3-hydrox 83.3 0.79 2.7E-05 46.6 4.1 32 48-80 2-33 (289)
410 3pqe_A L-LDH, L-lactate dehydr 83.2 0.98 3.3E-05 47.4 4.8 33 47-79 5-39 (326)
411 3d4o_A Dipicolinate synthase s 83.1 1.1 3.9E-05 46.0 5.3 33 48-80 156-188 (293)
412 2izz_A Pyrroline-5-carboxylate 83.1 1 3.5E-05 46.9 5.0 34 47-80 22-59 (322)
413 1vpd_A Tartronate semialdehyde 83.1 0.84 2.9E-05 46.8 4.2 32 48-79 6-37 (299)
414 3gpi_A NAD-dependent epimerase 82.9 1.3 4.5E-05 44.7 5.7 33 48-80 4-36 (286)
415 3p7m_A Malate dehydrogenase; p 82.8 1.2 4E-05 46.7 5.2 33 48-80 6-39 (321)
416 1w4x_A Phenylacetone monooxyge 82.7 0.87 3E-05 51.2 4.5 35 47-81 186-220 (542)
417 2rcy_A Pyrroline carboxylate r 82.6 0.99 3.4E-05 45.2 4.5 34 48-81 5-42 (262)
418 2i6t_A Ubiquitin-conjugating e 82.5 0.97 3.3E-05 46.9 4.4 34 47-80 14-49 (303)
419 3gt0_A Pyrroline-5-carboxylate 82.5 1.3 4.4E-05 44.1 5.3 32 48-79 3-38 (247)
420 3ew7_A LMO0794 protein; Q8Y8U8 82.5 1.3 4.4E-05 42.6 5.1 33 48-80 1-34 (221)
421 3e8x_A Putative NAD-dependent 82.5 1.2 4.1E-05 43.7 5.0 35 46-80 20-55 (236)
422 2p4q_A 6-phosphogluconate dehy 82.4 1.1 3.9E-05 49.7 5.3 33 48-80 11-43 (497)
423 2hk9_A Shikimate dehydrogenase 82.4 0.93 3.2E-05 46.2 4.2 32 48-79 130-161 (275)
424 2zyd_A 6-phosphogluconate dehy 82.4 0.99 3.4E-05 50.0 4.7 32 48-79 16-47 (480)
425 1yb4_A Tartronic semialdehyde 82.3 0.69 2.3E-05 47.3 3.2 32 48-80 4-35 (295)
426 3k30_A Histamine dehydrogenase 82.2 0.91 3.1E-05 52.7 4.6 36 48-83 524-561 (690)
427 2pgd_A 6-phosphogluconate dehy 82.1 1.1 3.8E-05 49.6 5.0 33 48-80 3-35 (482)
428 2ahr_A Putative pyrroline carb 82.0 0.99 3.4E-05 45.2 4.2 33 47-79 3-35 (259)
429 1lqt_A FPRA; NADP+ derivative, 82.0 1 3.5E-05 49.5 4.7 35 48-82 148-203 (456)
430 1gte_A Dihydropyrimidine dehyd 82.0 0.97 3.3E-05 55.0 4.8 33 48-80 333-366 (1025)
431 3u62_A Shikimate dehydrogenase 81.9 1.4 4.9E-05 44.3 5.4 32 49-80 110-142 (253)
432 1oju_A MDH, malate dehydrogena 81.8 1 3.4E-05 46.6 4.2 33 48-80 1-35 (294)
433 3c7a_A Octopine dehydrogenase; 81.8 0.68 2.3E-05 49.9 3.1 31 48-78 3-34 (404)
434 4aj2_A L-lactate dehydrogenase 81.8 1.5 5.2E-05 46.0 5.7 34 46-79 18-53 (331)
435 1x0v_A GPD-C, GPDH-C, glycerol 81.8 0.65 2.2E-05 49.0 2.9 34 48-81 9-49 (354)
436 3dfu_A Uncharacterized protein 81.6 0.44 1.5E-05 47.4 1.4 32 48-79 7-38 (232)
437 3don_A Shikimate dehydrogenase 81.5 0.97 3.3E-05 46.2 3.9 33 48-80 118-151 (277)
438 3ktd_A Prephenate dehydrogenas 81.5 1.3 4.5E-05 46.7 5.0 33 48-80 9-41 (341)
439 3d1l_A Putative NADP oxidoredu 81.3 1 3.6E-05 45.3 4.1 32 48-79 11-43 (266)
440 1i36_A Conserved hypothetical 81.2 1.1 3.7E-05 45.1 4.2 31 48-78 1-31 (264)
441 3h2s_A Putative NADH-flavin re 81.2 1.5 5.1E-05 42.4 5.0 32 48-79 1-33 (224)
442 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.1 1.2 4E-05 49.4 4.8 32 48-79 2-33 (478)
443 3vku_A L-LDH, L-lactate dehydr 81.1 1.3 4.4E-05 46.5 4.7 34 46-79 8-43 (326)
444 3nep_X Malate dehydrogenase; h 81.0 1.2 4E-05 46.5 4.4 33 48-80 1-35 (314)
445 1edz_A 5,10-methylenetetrahydr 80.9 1.5 5.1E-05 45.7 5.1 33 47-79 177-210 (320)
446 3ius_A Uncharacterized conserv 80.8 1.2 4.1E-05 45.0 4.4 33 48-80 6-38 (286)
447 3tri_A Pyrroline-5-carboxylate 80.7 1.6 5.6E-05 44.5 5.4 33 48-80 4-39 (280)
448 4gbj_A 6-phosphogluconate dehy 80.7 0.99 3.4E-05 46.6 3.7 33 48-80 6-38 (297)
449 3pwz_A Shikimate dehydrogenase 80.7 1.5 5.3E-05 44.6 5.1 33 47-79 120-153 (272)
450 2d5c_A AROE, shikimate 5-dehyd 80.6 1.6 5.4E-05 44.0 5.1 32 49-80 118-149 (263)
451 4g6h_A Rotenone-insensitive NA 80.5 0.93 3.2E-05 50.5 3.7 35 48-82 218-266 (502)
452 1np3_A Ketol-acid reductoisome 80.5 1.6 5.4E-05 46.0 5.3 33 48-80 17-49 (338)
453 1pn0_A Phenol 2-monooxygenase; 80.4 17 0.00059 41.7 14.5 37 454-490 351-390 (665)
454 3fbt_A Chorismate mutase and s 80.2 1.4 4.8E-05 45.1 4.6 34 47-80 122-156 (282)
455 3tnl_A Shikimate dehydrogenase 80.1 1.7 5.7E-05 45.3 5.2 33 47-79 154-187 (315)
456 2aef_A Calcium-gated potassium 79.9 0.65 2.2E-05 45.8 2.0 32 48-80 10-41 (234)
457 3o8q_A Shikimate 5-dehydrogena 79.9 1.7 5.7E-05 44.6 5.1 33 47-79 126-159 (281)
458 3ojo_A CAP5O; rossmann fold, c 79.8 1.2 4.1E-05 48.6 4.1 33 48-80 12-44 (431)
459 3jyo_A Quinate/shikimate dehyd 79.7 1.7 5.9E-05 44.5 5.1 32 48-79 128-160 (283)
460 2ywl_A Thioredoxin reductase r 79.6 2 6.9E-05 40.0 5.2 39 256-296 70-109 (180)
461 3ond_A Adenosylhomocysteinase; 79.5 1.7 5.7E-05 48.0 5.1 33 48-80 266-298 (488)
462 1nvt_A Shikimate 5'-dehydrogen 79.5 1.3 4.3E-05 45.5 4.0 31 48-79 129-159 (287)
463 3fi9_A Malate dehydrogenase; s 79.3 1.7 5.8E-05 45.9 5.0 32 48-79 9-43 (343)
464 4hv4_A UDP-N-acetylmuramate--L 79.2 1.1 3.8E-05 49.8 3.8 34 47-80 22-56 (494)
465 4b4o_A Epimerase family protei 79.2 2 6.7E-05 43.8 5.4 33 48-80 1-34 (298)
466 3dhn_A NAD-dependent epimerase 78.7 1.8 6.2E-05 41.9 4.8 34 47-80 4-38 (227)
467 2zqz_A L-LDH, L-lactate dehydr 78.7 1.6 5.6E-05 45.6 4.7 35 45-79 7-43 (326)
468 1ez4_A Lactate dehydrogenase; 78.5 1.5 5.1E-05 45.8 4.2 34 46-79 4-39 (318)
469 1leh_A Leucine dehydrogenase; 78.4 1.9 6.6E-05 45.8 5.1 32 48-79 174-205 (364)
470 1hdo_A Biliverdin IX beta redu 78.4 2 6.8E-05 40.7 4.9 33 48-80 4-37 (206)
471 1ldn_A L-lactate dehydrogenase 78.3 1.7 5.8E-05 45.3 4.6 33 47-79 6-40 (316)
472 3obb_A Probable 3-hydroxyisobu 78.2 1.6 5.5E-05 45.1 4.3 34 47-80 3-36 (300)
473 2iz1_A 6-phosphogluconate dehy 78.0 1.8 6E-05 47.9 4.9 32 48-79 6-37 (474)
474 4fk1_A Putative thioredoxin re 78.0 1.9 6.5E-05 44.1 4.9 42 448-492 261-302 (304)
475 3t4e_A Quinate/shikimate dehyd 77.8 2.2 7.5E-05 44.4 5.3 33 47-79 148-181 (312)
476 3rui_A Ubiquitin-like modifier 77.5 2.1 7.2E-05 45.0 5.0 33 47-79 34-67 (340)
477 3d0o_A L-LDH 1, L-lactate dehy 77.4 1.7 5.9E-05 45.3 4.3 32 48-79 7-40 (317)
478 2dvm_A Malic enzyme, 439AA lon 77.4 2.1 7.2E-05 46.6 5.1 30 48-77 187-219 (439)
479 3h8v_A Ubiquitin-like modifier 77.2 1.6 5.4E-05 45.0 3.9 32 48-79 37-69 (292)
480 3gvp_A Adenosylhomocysteinase 76.9 2.3 7.7E-05 46.1 5.1 33 48-80 221-253 (435)
481 1npy_A Hypothetical shikimate 76.9 2.1 7.1E-05 43.6 4.7 32 48-79 120-152 (271)
482 2dbq_A Glyoxylate reductase; D 76.8 2.5 8.4E-05 44.4 5.4 34 47-80 150-183 (334)
483 3b1f_A Putative prephenate deh 76.8 1.9 6.6E-05 43.8 4.5 32 48-79 7-40 (290)
484 3vps_A TUNA, NAD-dependent epi 76.7 2.4 8.3E-05 43.2 5.3 35 47-81 7-42 (321)
485 1gpj_A Glutamyl-tRNA reductase 76.6 1.9 6.5E-05 46.5 4.5 34 47-80 167-201 (404)
486 1zud_1 Adenylyltransferase THI 76.4 2 6.9E-05 43.1 4.4 32 48-79 29-61 (251)
487 3ce6_A Adenosylhomocysteinase; 76.3 2.3 7.9E-05 47.1 5.1 33 48-80 275-307 (494)
488 3ngx_A Bifunctional protein fo 76.2 2.3 7.9E-05 43.2 4.7 32 47-78 150-182 (276)
489 1a4i_A Methylenetetrahydrofola 76.0 2.3 7.9E-05 43.7 4.7 33 47-79 165-198 (301)
490 1lu9_A Methylene tetrahydromet 75.9 2.7 9.1E-05 42.9 5.3 32 48-79 120-152 (287)
491 4a26_A Putative C-1-tetrahydro 75.7 2.4 8.2E-05 43.7 4.7 33 47-79 165-198 (300)
492 2yjz_A Metalloreductase steap4 77.4 0.57 1.9E-05 45.5 0.0 33 48-80 20-52 (201)
493 3r6d_A NAD-dependent epimerase 75.3 3.4 0.00012 39.9 5.6 33 48-80 6-40 (221)
494 1y1p_A ARII, aldehyde reductas 75.1 3.7 0.00013 42.3 6.2 33 47-79 11-44 (342)
495 2gcg_A Glyoxylate reductase/hy 74.8 2.7 9.2E-05 44.0 5.0 34 47-80 155-188 (330)
496 2x0j_A Malate dehydrogenase; o 74.5 2.1 7.3E-05 44.1 4.0 32 48-79 1-34 (294)
497 3h9u_A Adenosylhomocysteinase; 74.5 2.8 9.7E-05 45.5 5.1 33 48-80 212-244 (436)
498 4gx0_A TRKA domain protein; me 74.3 2.9 0.0001 47.1 5.5 34 48-81 349-382 (565)
499 1smk_A Malate dehydrogenase, g 74.3 1.8 6.3E-05 45.2 3.6 34 47-80 8-44 (326)
500 3ba1_A HPPR, hydroxyphenylpyru 74.1 3.2 0.00011 43.5 5.4 33 48-80 165-197 (333)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=3.4e-50 Score=471.57 Aligned_cols=464 Identities=45% Similarity=0.770 Sum_probs=354.5
Q ss_pred hHHHHHHHHHHHhhhccccccccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeec
Q 004948 12 SLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKM 91 (722)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~ 91 (722)
..|..+..|+..++++|+|+..... .+ .....+||+|||||++||+||++|+++|++|+|||+++++||++.+++.
T Consensus 76 ~~i~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~ 151 (662)
T 2z3y_A 76 VLVHRVHSYLERHGLINFGIYKRIK--PL--PTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK 151 (662)
T ss_dssp HHHHHHHHHHHHTTSSSCSSCBCSS--CC--CSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccccC--CC--cccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc
Confidence 5688889999999999999876532 11 1233589999999999999999999999999999999999999999987
Q ss_pred CCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhCCCeeeecCCcceEecCCcccChhhhHHHHHHHHHHHHHHHHHHHH
Q 004948 92 EGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQL 171 (722)
Q Consensus 92 ~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 171 (722)
.+. .+|+|++++++..++++..+.+++|+..........++..+|..++..........+..++.....+...
T Consensus 152 ~~~-------~~~~G~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (662)
T 2z3y_A 152 GNY-------VADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQ 224 (662)
T ss_dssp TTE-------EEESSCCEECCSBTCHHHHHHHHHTCCEEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCc-------hhhcCcEEEeCCCCchHHHHHHHhCcchhcccccceEEeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhc
Confidence 654 9999999998877788988999999988776666667777777654433221111121111111000000
Q ss_pred hhc---cccCCCHHHHH---------------------------------------------------------------
Q 004948 172 MGE---VAMDVSLGSAL--------------------------------------------------------------- 185 (722)
Q Consensus 172 ~~~---~~~~~s~~~~l--------------------------------------------------------------- 185 (722)
... .....++++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~ 304 (662)
T 2z3y_A 225 LDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDIT 304 (662)
T ss_dssp SCCCEETTEECBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCT
T ss_pred ccccccCCCCCCHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccc
Confidence 000 00000000000
Q ss_pred ----------------HHHHH--------------Hhcc-----CCCHHHHHHHHHHHHhhhhccchhhHHHHHHhhccC
Q 004948 186 ----------------ETFWR--------------VYWD-----SGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQD 230 (722)
Q Consensus 186 ----------------~~~~~--------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 230 (722)
..+.. .... ..+.....++.|+....++..+..+..++...|.+.
T Consensus 305 ~~~s~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~ 384 (662)
T 2z3y_A 305 AEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQD 384 (662)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHTHHHHHHHHHHHHHTTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTT
T ss_pred hhhhhhhhhhhHHHHHhhhhhhhhhhhhHHHHHHHhhccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCC
Confidence 00000 0000 123344455666666666655555555555556554
Q ss_pred CCCCCCCCeeeeCCChHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-C------CEEEEeCEEEEcCChhhhhc--C
Q 004948 231 DPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-G------SQVFEGDMVLCTVPLGVLKS--G 301 (722)
Q Consensus 231 ~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~ln~~V~~I~~~~~~v~V~~-~------G~~~~AD~VI~AvP~~~l~~--~ 301 (722)
..+...+.++.++||+++|+++|+++++|++|++|++|..++++|+|++ + +++++||+||+|+|+.++++ .
T Consensus 385 ~~~~~~g~~~~~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 385 DDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp GGGCCBSCCEEETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred cccccCCceeeecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 4445567789999999999999999999999999999999999999887 4 57899999999999999986 3
Q ss_pred CcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEeeccccCCCcEEEEEecchhh
Q 004948 302 SIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAA 381 (722)
Q Consensus 302 ~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~vl~~~v~g~~a 381 (722)
.|.|.|+||+.+.+++++++|+++.||++.|+++||..+...+|.+.+.....+....+|+.. +.+++++|+.|..+
T Consensus 465 ~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a 541 (662)
T 2z3y_A 465 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAA 541 (662)
T ss_dssp SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHH
T ss_pred ceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhH
Confidence 478999999999999999999999999999999999877677887766544455556666543 45688999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccCC--------
Q 004948 382 HKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGD-------- 453 (722)
Q Consensus 382 ~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~-------- 453 (722)
..+..++++++++.++++|+++|+.. ..++|..+.+++|.++||+.|+|++++||.....++.+.+|+..
T Consensus 542 ~~~~~lsdee~~~~~l~~L~~~~g~~--~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~ 619 (662)
T 2z3y_A 542 GIMENISDDVIVGRCLAILKGIFGSS--AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP 619 (662)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHCTT--SSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC--------
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhCCc--ccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccccccc
Confidence 99999999999999999999999853 34689999999999999999999999999987778888888632
Q ss_pred ---CcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhh
Q 004948 454 ---GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANA 491 (722)
Q Consensus 454 ---~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~ 491 (722)
+||||||++|+..|+||||||+.||++||++|++.+++
T Consensus 620 ~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 620 QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp -CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 69999999999888999999999999999999998765
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=5e-50 Score=476.59 Aligned_cols=467 Identities=45% Similarity=0.773 Sum_probs=348.0
Q ss_pred hHHHHHHHHHHHhhhccccccccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeec
Q 004948 12 SLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKM 91 (722)
Q Consensus 12 ~~~~~~~~~~~~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~ 91 (722)
..|..+..|+..++++|+|+..... + ......++|+|||||++||+||++|+++|++|+|||+++++||++.+++.
T Consensus 247 ~~i~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~ 322 (852)
T 2xag_A 247 VLVHRVHSYLERHGLINFGIYKRIK---P-LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK 322 (852)
T ss_dssp HHHHHHHHHHHHTTSSSCSSCBCSS---C-CCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCcccccC---C-cccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecc
Confidence 5788889999999999999875532 1 11233489999999999999999999999999999999999999999987
Q ss_pred CCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhCCCeeeecCCcceEecCCcccChhhhHHHHHHHHHHHHHHHHHHHH
Q 004948 92 EGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQL 171 (722)
Q Consensus 92 ~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 171 (722)
.+. .+|+|++++++...+++..+.+++|+....+.....++..+|..++..........+..++.....+...
T Consensus 323 ~~~-------~~~~G~~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~ 395 (852)
T 2xag_A 323 GNY-------VADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQ 395 (852)
T ss_dssp TTE-------EEESSCCEECCSBTCHHHHHHHHTTCCEEECCCCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccc-------chhcCceEecCCCCchHHHHHHHhCCchhhccccceEEecCCccccchhhhhhhhhhhhhHHHHHHHhhh
Confidence 654 9999999998877788988999999988776666667777777654433221111222211111111000
Q ss_pred hhc---cccCCCHHHHHH--------------------------------------------------------------
Q 004948 172 MGE---VAMDVSLGSALE-------------------------------------------------------------- 186 (722)
Q Consensus 172 ~~~---~~~~~s~~~~l~-------------------------------------------------------------- 186 (722)
... ...+.++++.++
T Consensus 396 ~~~~~~~~~~~slg~~~e~v~~~~er~~~~e~l~~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~ 475 (852)
T 2xag_A 396 LDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDIT 475 (852)
T ss_dssp SCCCEETTEECBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHH
T ss_pred hhhhcccCCCccHHHHHHHhhhhhhhhcchhHHHHhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccch
Confidence 000 000011111100
Q ss_pred -----------------HHHHHh--------------cc-----CCCHHHHHHHHHHHHhhhhccchhhHHHHHHhhccC
Q 004948 187 -----------------TFWRVY--------------WD-----SGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQD 230 (722)
Q Consensus 187 -----------------~~~~~~--------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 230 (722)
.+..+. .. ..+.....++.|++..+++..+..+..+++..|.+.
T Consensus 476 ~e~s~rs~~~~l~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~ 555 (852)
T 2xag_A 476 AEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQD 555 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGG
T ss_pred hhhhhhhhhhhHHHHHHHHhhhhhhhhhHHHHHHhhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhc
Confidence 000000 00 011122233334444444333333333343344443
Q ss_pred CCCCCCCCeeeeCCChHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-C------CEEEEeCEEEEcCChhhhhc--C
Q 004948 231 DPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-G------SQVFEGDMVLCTVPLGVLKS--G 301 (722)
Q Consensus 231 ~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~ln~~V~~I~~~~~~v~V~~-~------G~~~~AD~VI~AvP~~~l~~--~ 301 (722)
..+...+.++.++||++.|+++|+++++|++|++|++|.+++++|+|++ + +++++||+||+|+|+.++++ .
T Consensus 556 ~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 556 DDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp GGGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred cccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 3344556788999999999999999999999999999999999999887 4 57899999999999999987 3
Q ss_pred CcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEeeccccCCCcEEEEEecchhh
Q 004948 302 SIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAA 381 (722)
Q Consensus 302 ~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~vl~~~v~g~~a 381 (722)
.|.|.|+||+.+.+++++++|+++.||++.|+++||..+...||++.......+..+++|+.. +.++|++|+.|..+
T Consensus 636 ~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a 712 (852)
T 2xag_A 636 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAA 712 (852)
T ss_dssp SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHH
T ss_pred ccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCH
Confidence 478999999999999999999999999999999999876678888765444444445555543 45688899999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccCC--------
Q 004948 382 HKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGD-------- 453 (722)
Q Consensus 382 ~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~-------- 453 (722)
..+..++++++++.++++|.++|+.. ..++|..+.+++|.++||+.|+|+++.||.....++.+.+|+..
T Consensus 713 ~~l~~lsdeel~~~~l~~L~~ifG~~--~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~ 790 (852)
T 2xag_A 713 GIMENISDDVIVGRCLAILKGIFGSS--AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAP 790 (852)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHCTT--TCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHhCcc--ccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccccccccccc
Confidence 99999999999999999999999853 34688999999999999999999999999987778888887632
Q ss_pred ---CcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhhhh
Q 004948 454 ---GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (722)
Q Consensus 454 ---~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (722)
+||||||++|+..|+||||||+.||++||++|++.+.+...
T Consensus 791 ~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~ 834 (852)
T 2xag_A 791 QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMY 834 (852)
T ss_dssp CCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGG
T ss_pred CCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 69999999999888999999999999999999999866443
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=6.6e-49 Score=464.35 Aligned_cols=469 Identities=36% Similarity=0.654 Sum_probs=360.5
Q ss_pred hhHhHHHHHHHHHHHhhhccccccccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeee
Q 004948 9 HCHSLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (722)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T 88 (722)
.+...+..++.|+..+|++|+|.........+.+.....+||+|||||++||+||+.|+++|++|+|||+++++|||++|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T 377 (776)
T 4gut_A 298 RCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWD 377 (776)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCE
T ss_pred ccHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeee
Confidence 35577889999999999999998764433334333344689999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhCCCeeeecCCcceEecCCcccChhhhHHHHHHHHHHHHHHHHH
Q 004948 89 KKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRL 168 (722)
Q Consensus 89 ~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~ 168 (722)
.+..++ ..+|+|++++++...+++..+++++|++.........++..+|..............+..++.....+
T Consensus 378 ~~~~~G------~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~ 451 (776)
T 4gut_A 378 DKSFKG------VTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEW 451 (776)
T ss_dssp ECCSTT------CCEESSCCEEECCTTCHHHHHHHHHTCCCEECCSCCCEECTTSCBCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC------eEeccCCeEEeCCccChHHHHHHHhCCcccccccccceEccCCcccchhHHHHHHHHHHHHHHHHHHH
Confidence 865432 48999999999988899999999999988777666677777777766555544444555555544443
Q ss_pred HHHhhccccCCCHHHHHHH----HHHHhccCCCHHHHHHHHHHHHhhhhccchhhHHHHHHhhccCCC-CCCCCCeeeeC
Q 004948 169 RQLMGEVAMDVSLGSALET----FWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDP-YDMGGDHCFLP 243 (722)
Q Consensus 169 ~~~~~~~~~~~s~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~g~~~~~~ 243 (722)
+.. .....+.++...+.. +....+..........+.+....++...+..+..++...+..... ...++....+.
T Consensus 452 ~~~-~~~~~d~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~ 530 (776)
T 4gut_A 452 RKD-KTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLT 530 (776)
T ss_dssp GGG-CCGGGCCBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECT
T ss_pred hhc-ccccccccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEEC
Confidence 321 112344555554432 112222222322222333333333333333333333333322111 12445677889
Q ss_pred CChHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCC
Q 004948 244 GGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGY 322 (722)
Q Consensus 244 gG~~~L~~aLa~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~ 322 (722)
+|++.++++|+++++|++|++|++|..++++|+|++ +|++++||+||+|+|+.+++...+.|.|+||+.+.++++++++
T Consensus 531 ~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~ 610 (776)
T 4gut_A 531 PGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGA 610 (776)
T ss_dssp TCTHHHHHHHHTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEE
T ss_pred ChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCC
Confidence 999999999999999999999999999999999998 7889999999999999999866788999999999999999999
Q ss_pred CceeEEEEEcCCCcccCC---CCCceeeecCCCCCcceEEEeeccccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHH
Q 004948 323 GLLNKVAMLFPYVFWETD---LDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQI 399 (722)
Q Consensus 323 ~~~~kV~l~f~~~~w~~~---~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~ 399 (722)
+++.||++.|+++||.+. ...+|.+.......+.+..+++.....+..+|.+|+.|..+..+..++++++++.++++
T Consensus 611 g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~ 690 (776)
T 4gut_A 611 GIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMAT 690 (776)
T ss_dssp ECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHH
T ss_pred eeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999864 34556665443344555666665444445799999999989999999999999999999
Q ss_pred HHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHH
Q 004948 400 LKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGL 479 (722)
Q Consensus 400 L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~ 479 (722)
|+++||.. .++.|..+.+++|..+||+.|+|+++.||.....++.+.+|+ +++||||||+|+..|+||||||+.||+
T Consensus 691 L~~ifg~~--~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~-~grL~FAGE~Ts~~~~gtveGAi~SG~ 767 (776)
T 4gut_A 691 LRELFKEQ--EVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDI-QGTVFFAGEATNRHFPQTVTGAYLSGV 767 (776)
T ss_dssp HHHHTTTS--CCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCB-TTTEEECSGGGCSSSCSSHHHHHHHHH
T ss_pred HHHHhCcc--cccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcC-CCcEEEEehhhcCCCCcCHHHHHHHHH
Confidence 99999853 467899999999999999999999999998877788899886 389999999999888999999999999
Q ss_pred HHHHHHHH
Q 004948 480 RETAKMAH 487 (722)
Q Consensus 480 ~AA~~Il~ 487 (722)
+||++|++
T Consensus 768 RaA~~Ila 775 (776)
T 4gut_A 768 REASKIAA 775 (776)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99999974
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=6.3e-45 Score=415.61 Aligned_cols=429 Identities=25% Similarity=0.328 Sum_probs=288.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEecCCCcceeeeeeec-CCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGGRVYTKKM-EGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GGr~~T~~~-~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
.+||||||||+|||+||++|+++| ++|+|||+++++|||++|.+. .|. .+|+|++|+++...+++..++.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~-------~~D~G~~~~~~~~~~~~~~~~~~ 80 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGR-------KYDIGASWHHDTLTNPLFLEEAQ 80 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGC-------EEESSCCEECCTTTCHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCc-------EEecCCeEEecCCCChHHHHHHH
Confidence 379999999999999999999999 999999999999999999886 454 99999999988767788878888
Q ss_pred hCCCe----eeecCCcc-eEecCCcccChhhhHHHHHHHHHHHHHHHHHHHHh-h--ccccCCCHHHHHHHHHHHhccCC
Q 004948 125 LGSLL----HKVRDKCP-LYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLM-G--EVAMDVSLGSALETFWRVYWDSG 196 (722)
Q Consensus 125 LGl~~----~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-~--~~~~~~s~~~~l~~~~~~~~~~~ 196 (722)
+|+.. ........ .+..++..+....... +..++..+..+.... . ....+.++.+++..+........
T Consensus 81 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~~~~l 156 (516)
T 1rsg_A 81 LSLNDGRTRFVFDDDNFIYIDEERGRVDHDKELL----LEIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFL 156 (516)
T ss_dssp HHHHHCCCCEECCCCCCEEEETTTEECTTCTTTC----HHHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHHGGGS
T ss_pred hCCCCcceeEEECCCCEEEEcCCCccccccHHHH----HHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhccc
Confidence 88632 11222222 2222322221101111 111122221111111 0 11346778887765433322233
Q ss_pred CHHHHHHHHHHHHhhhhccchhhHHHHHHhhccCCCCCCCCCeeeeCCChHHHHHHHHHcCC---cccCceEEEEEec-C
Q 004948 197 NAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENVP---ILYEKTVHTIRYG-S 272 (722)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~---I~ln~~V~~I~~~-~ 272 (722)
.......+...+..+....+.....++..+.... ..+...++.+ ++.|+++|++.++ |++|++|++|..+ +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~----~~~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~ 231 (516)
T 1rsg_A 157 TNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG----HQGRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPS 231 (516)
T ss_dssp CHHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC----CSSCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh----ccCcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCC
Confidence 3332222222222111111111222222222111 2233456677 9999999998874 9999999999986 6
Q ss_pred CcEEEEE-CCEEEEeCEEEEcCChhhhhcC---------CcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCC
Q 004948 273 DGVQVLA-GSQVFEGDMVLCTVPLGVLKSG---------SIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLD 342 (722)
Q Consensus 273 ~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~---------~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~ 342 (722)
++|.|++ +|++++||+||+|+|+.+++.. .+.|.|+||+.+.+++++++|+++.||++.|+++||+++..
T Consensus 232 ~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~ 311 (516)
T 1rsg_A 232 KNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESS 311 (516)
T ss_dssp SCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCS
T ss_pred CeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCC
Confidence 6799988 7888999999999999999742 47899999999999999999999999999999999987644
Q ss_pred CceeeecCCC-------------------------------CCcceEEEeeccccCCCcEEEEEecchhhhhhcCC--CH
Q 004948 343 TFGHLTDDSS-------------------------------SRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESM--PP 389 (722)
Q Consensus 343 ~~g~l~~~~~-------------------------------~~~~~~~~~~~~~p~g~~vl~~~v~g~~a~~~~~l--s~ 389 (722)
.+..+...+. .......+.+...+.+.++|++|+.++.+..++.+ ++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~ 391 (516)
T 1rsg_A 312 KIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDK 391 (516)
T ss_dssp EEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCH
T ss_pred cEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCH
Confidence 4443332110 00001122333345577789999999999888888 88
Q ss_pred HHHHHH---HHHHHHhhcCCC----CCCCC-------CCc--eEEEecCCCCCCCCcccCCCCCCCCCc-cHHHHhcccC
Q 004948 390 TDAVTK---VLQILKGIYEPK----GINVP-------EPI--QTVCTRWGGDPFSLGSYSNVAVGASGD-DYDIMAESVG 452 (722)
Q Consensus 390 eel~~~---vl~~L~~i~~~~----~~~v~-------~p~--~~~~~rW~~~p~~~G~y~~~~pG~~~~-~~~~l~~pv~ 452 (722)
+++++. ++++|.++||.. +...+ .|. .+.+++|..+||+.|+|+++.||.... .+..+..+.
T Consensus 392 ~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~- 470 (516)
T 1rsg_A 392 ERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQ- 470 (516)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCS-
T ss_pred HHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCC-
Confidence 887654 677777777631 11121 254 889999999999999999999998542 355565432
Q ss_pred CCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhh
Q 004948 453 DGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (722)
Q Consensus 453 ~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (722)
+++||||||+|+..|+||||||+.||++||++|++.++.+
T Consensus 471 ~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 471 DSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp SSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 3899999999998889999999999999999999987654
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=8.9e-45 Score=414.65 Aligned_cols=441 Identities=22% Similarity=0.322 Sum_probs=315.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecC-CCCCCCcceEeeccceEEcCCCCcHHHHHHHHh
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKME-GGAGNRISASADLGGSVLTGTLGNPLGILAKQL 125 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~-g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eL 125 (722)
++||||||||+|||+||++|+++|++|+|||+++++|||++|.+.. +. .+|+|++++.+. .+.+..+++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~-------~~d~G~~~~~~~-~~~~~~l~~~l 75 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVK-------YVDLGGSYVGPT-QNRILRLAKEL 75 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTS-------CEESSCCEECTT-CHHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCc-------ccccCceEecCC-cHHHHHHHHHc
Confidence 4899999999999999999999999999999999999999999875 44 899999999876 46788899999
Q ss_pred CCCeeeecC-CcceEecCCcccChh------hhHHHHHHHHHHHHHHHHHHHHhhcc----------ccCCCHHHHHHHH
Q 004948 126 GSLLHKVRD-KCPLYRLDGNSVDPE------IDMKVEADFNRLLDKASRLRQLMGEV----------AMDVSLGSALETF 188 (722)
Q Consensus 126 Gl~~~~~~~-~~~~~~~~G~~~~~~------~~~~~~~~~~~ll~~~~~~~~~~~~~----------~~~~s~~~~l~~~ 188 (722)
|+....... ...++..+|..+..+ ........+..++....++...+... .++.++.+++...
T Consensus 76 gl~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~ 155 (520)
T 1s3e_A 76 GLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKL 155 (520)
T ss_dssp TCCEEECCCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHH
T ss_pred CCcceecccCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhh
Confidence 998765432 233444555432211 11111112223333333322211100 1344555555421
Q ss_pred HHHhccCCCHHHHHHHHHHHHhhhhccchhhHHHHH-HhhccCC------CCCCCCCeeeeCCChHHHHHHHHH--cCCc
Q 004948 189 WRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSL-AFWDQDD------PYDMGGDHCFLPGGNGRLVQALVE--NVPI 259 (722)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~~~------~~~~~g~~~~~~gG~~~L~~aLa~--~l~I 259 (722)
..++....++.+............++.... .++.... ....++..+++.||++.|+++|++ +.+|
T Consensus 156 ------~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i 229 (520)
T 1s3e_A 156 ------CWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRV 229 (520)
T ss_dssp ------CSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGE
T ss_pred ------CCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHcCCcE
Confidence 223444444444332211111111111111 1111100 011234567899999999999988 6689
Q ss_pred ccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCccc
Q 004948 260 LYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWE 338 (722)
Q Consensus 260 ~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~ 338 (722)
++|++|++|..++++|+|++ +|+++.||+||+|+|+.++.+ +.+.|+||+.+.+++++++++++.||++.|+++||.
T Consensus 230 ~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~ 307 (520)
T 1s3e_A 230 KLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWR 307 (520)
T ss_dssp ESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGG
T ss_pred EcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCccc
Confidence 99999999999988999888 888999999999999999874 557899999999999999999999999999999997
Q ss_pred CCCCCceeeecCCCCCcceEEEeeccccCC-CcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceE
Q 004948 339 TDLDTFGHLTDDSSSRGEFFLFYSYATVAG-GPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQT 417 (722)
Q Consensus 339 ~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g-~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~ 417 (722)
+.. ..+.+...... ......++...+++ .+++++|+.+..+..|..++++++++.++++|+++|+.. .+..|..+
T Consensus 308 ~~~-~~g~~~~~~~~-~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~--~~~~p~~~ 383 (520)
T 1s3e_A 308 KKD-YCGTMIIDGEE-APVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSL--EALEPVHY 383 (520)
T ss_dssp GGT-EEEEEEECSTT-CSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCG--GGGCCSEE
T ss_pred CCC-CCceeeccCCC-CceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcc--ccCCccEE
Confidence 542 22333211111 22223444444444 478999999888888999999999999999999999742 24578899
Q ss_pred EEecCCCCCCCCcccC-CCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhhhhhh
Q 004948 418 VCTRWGGDPFSLGSYS-NVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARALRM 496 (722)
Q Consensus 418 ~~~rW~~~p~~~G~y~-~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~~~ 496 (722)
..++|..+||+.|+|. .+.||......+.+++|+ +||||||++++..|+|+||||+.||++||++|++.++.. .+.
T Consensus 384 ~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~--~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~-~~~ 460 (520)
T 1s3e_A 384 EEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPV--DRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI-PED 460 (520)
T ss_dssp EEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCB--TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS-CGG
T ss_pred EEEeeCCCCCCCCCCccccCCCccccchHHHhCCC--CCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC-ccc
Confidence 9999999999999998 677886543444677888 899999999987788999999999999999999998654 567
Q ss_pred hhccCCCCCCCccc
Q 004948 497 KVKVGKIPSKNAYS 510 (722)
Q Consensus 497 ~i~~~~~~~~~~~~ 510 (722)
.||.+++++.+..+
T Consensus 461 ~~~~~~~~~~~~~~ 474 (520)
T 1s3e_A 461 EIWQSEPESVDVPA 474 (520)
T ss_dssp GSSCCCCCCSSSCC
T ss_pred cccccCCccccCCc
Confidence 78999998877543
No 6
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=2.1e-41 Score=382.11 Aligned_cols=433 Identities=25% Similarity=0.427 Sum_probs=295.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcC---CCCcHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG---TLGNPLGILA 122 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~---~~~~~l~~L~ 122 (722)
.+||+|||||++||+||++|+++|+ +|+|||+++++||++.+....+. .+|+|++|+.+ ...+++..++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~-------~~d~g~~~~~~~~~~~~~~~~~~~ 76 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGI-------NVELGANWVEGVNGGKMNPIWPIV 76 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTE-------EEESSCCEEEEESSSSCCTHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCc-------EEeeCCeEEeccCCCCCCHHHHHH
Confidence 4899999999999999999999999 89999999999999999988765 99999999984 3346788899
Q ss_pred HH-hCCCeeeecC---CcceEecCCcccChhhhHHHHHHHHHHHHHHHHHHHHhhc-cccCCCHHHHHHHHHHHhccCCC
Q 004948 123 KQ-LGSLLHKVRD---KCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGE-VAMDVSLGSALETFWRVYWDSGN 197 (722)
Q Consensus 123 ~e-LGl~~~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~s~~~~l~~~~~~~~~~~~ 197 (722)
++ +|+....... ...++..+|..++.+........+..+......+...+.. ..++.++... ..+.........
T Consensus 77 ~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~l~~~~~~~~~ 155 (472)
T 1b37_A 77 NSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAM-QRLNEHQPNGPA 155 (472)
T ss_dssp HTTSCCCEEECCCTTGGGCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCBHHHH-HHHHHTSSSSCC
T ss_pred HhhcCCceeeccCccccceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHH-HHHhhhcccccc
Confidence 99 9998654321 1235556777765433211111111111111111111110 1123343221 122211110011
Q ss_pred HHHHHHHHHHHHhhhhccchhhHHHHHHhhccCCCC-CCCCCeee--eCCChHHHHHHHHHcC-------------Cccc
Q 004948 198 AEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPY-DMGGDHCF--LPGGNGRLVQALVENV-------------PILY 261 (722)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-~~~g~~~~--~~gG~~~L~~aLa~~l-------------~I~l 261 (722)
.....++.++.....+.... ...++..+.....+ ..++..++ +++|++.|+++|++.+ +|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~ 233 (472)
T 1b37_A 156 TPVDMVVDYYKFDYEFAEPP--RVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQL 233 (472)
T ss_dssp SHHHHHHHHHHTHHHHSSCG--GGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEES
T ss_pred cHHHHHHHHHHHhhhhcccc--cccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEc
Confidence 11122233322211111110 00010000000000 01122222 4799999999998753 6999
Q ss_pred CceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCC
Q 004948 262 EKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETD 340 (722)
Q Consensus 262 n~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~ 340 (722)
|++|++|..++++|+|++ +|++++||+||+|+|+.+++...+.|.|+||+.+.+++++++++++.||++.|+++||...
T Consensus 234 ~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~ 313 (472)
T 1b37_A 234 NKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG 313 (472)
T ss_dssp SCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS
T ss_pred CCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC
Confidence 999999999999999988 7889999999999999999876677899999999999999999999999999999999863
Q ss_pred CCCceeeecCCCCCcceEEEeec-cccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEE
Q 004948 341 LDTFGHLTDDSSSRGEFFLFYSY-ATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVC 419 (722)
Q Consensus 341 ~~~~g~l~~~~~~~~~~~~~~~~-~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~ 419 (722)
...+++...+...+....+... ...++..++++++.+..+..|..++++++++.++++|+++||. ..+++|+...+
T Consensus 314 -~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg--~~~~~~~~~~~ 390 (472)
T 1b37_A 314 -KGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPG--KDVPDATDILV 390 (472)
T ss_dssp -TTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTT--SCCCCCSEEEC
T ss_pred -CCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCC--CCCCCCceEEe
Confidence 2233332222111211122111 1234567777788777677788899999999999999999952 34567888888
Q ss_pred ecCCCCCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhhhh
Q 004948 420 TRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (722)
Q Consensus 420 ~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (722)
++|..+||+.|+|+.+.||.....++.+++|+ +||||||+++++.|+||||||+.||++||++|++.++.+.-
T Consensus 391 ~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~--~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~ 463 (472)
T 1b37_A 391 PRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPV--GRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMC 463 (472)
T ss_dssp CCTTTCTTTSSSEEECBTTCCHHHHHHHHCCB--TTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cccCCCCCCCcccCCCCCCCChhHHHHHhccC--CcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcC
Confidence 99999999999999888998755577889998 89999999999877899999999999999999998865443
No 7
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=1e-41 Score=386.67 Aligned_cols=415 Identities=19% Similarity=0.225 Sum_probs=285.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
++||+|||||++||+||++|+++|++|+|||+++++|||++|.+..|. .+|+|++++++.+. .+..+++++|
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~-------~~d~G~~~~~~~~~-~~~~~l~~lg 110 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGY-------PYEMGGTWVHWHQS-HVWREITRYK 110 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTE-------EEECSCCCBCTTSH-HHHHHHHHTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCe-------eecCCCeEecCccH-HHHHHHHHcC
Confidence 489999999999999999999999999999999999999999998765 99999999987654 4666888999
Q ss_pred C--Ceeeec---C-CcceEecC--CcccChhhhHHHHHHHHHHHHHHHH-----HHHHhh-----------ccccCCCHH
Q 004948 127 S--LLHKVR---D-KCPLYRLD--GNSVDPEIDMKVEADFNRLLDKASR-----LRQLMG-----------EVAMDVSLG 182 (722)
Q Consensus 127 l--~~~~~~---~-~~~~~~~~--G~~~~~~~~~~~~~~~~~ll~~~~~-----~~~~~~-----------~~~~~~s~~ 182 (722)
+ +..... . ...++..+ |.....+... ....+...+..... .+..+. ...++.++.
T Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 189 (495)
T 2vvm_A 111 MHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA-EDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYS 189 (495)
T ss_dssp CTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH-HHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHH
T ss_pred CcceeecccccCCCceEEEecCCCCceeecCHHH-HHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHH
Confidence 9 444332 1 22334334 4433332211 11111111111111 000000 001234555
Q ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHhhhhccchhhHHHHHHhh-ccCC-CC---CCCCCeeeeCCChHHHHHHHHHc-
Q 004948 183 SALETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFW-DQDD-PY---DMGGDHCFLPGGNGRLVQALVEN- 256 (722)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~-~~---~~~g~~~~~~gG~~~L~~aLa~~- 256 (722)
+++... ....++....++.+.+...........+......+ .... .+ ......+++++|++.|+++|++.
T Consensus 190 ~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l 265 (495)
T 2vvm_A 190 ERIDQI----RDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEA 265 (495)
T ss_dssp HHHHHH----GGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHH
T ss_pred HHHHHh----hccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHh
Confidence 554322 11134555555555443332222222111111111 0000 00 00123567899999999999764
Q ss_pred -----CCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEE
Q 004948 257 -----VPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAM 330 (722)
Q Consensus 257 -----l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l 330 (722)
++|++|++|++|..++++|.|++ +|++++||+||+|+|+.++.+ +.|.|+||+.+.++++.+.+++..||++
T Consensus 266 ~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l 343 (495)
T 2vvm_A 266 AGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHA 343 (495)
T ss_dssp HTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEE
T ss_pred hhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEE
Confidence 45999999999999888899988 777899999999999999985 5678999999999999999999999999
Q ss_pred EcCCCcccCCCCCceeeecCCCCCcceEEEeeccccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCC
Q 004948 331 LFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGIN 410 (722)
Q Consensus 331 ~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~ 410 (722)
.|++++|. ...+....+ ....+.+.+...|.+..++++|+.. .+. +++++.++.++++|+++++.
T Consensus 344 ~~~~~~~~---~~~g~~~~~---~~~~~~~~~~~~~~~~~vl~~~~~~-~~~----~~~~e~~~~~~~~L~~~~~~---- 408 (495)
T 2vvm_A 344 EVDNKDMR---SWTGIAYPF---NKLCYAIGDGTTPAGNTHLVCFGNS-ANH----IQPDEDVRETLKAVGQLAPG---- 408 (495)
T ss_dssp EESCGGGG---GEEEEECSS---CSSCEEEEEEECTTSCEEEEEEECS-TTC----CCTTTCHHHHHHHHHTTSTT----
T ss_pred EECCccCC---CceeEecCC---CCcEEEecCCCCCCCCeEEEEEeCc-ccc----CCCHHHHHHHHHHHHHhcCC----
Confidence 99999984 122332221 1122333344445566778877643 221 45667788899999998763
Q ss_pred CCCCceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHh
Q 004948 411 VPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCAN 490 (722)
Q Consensus 411 v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~ 490 (722)
.+.|..+.+++|..+||+.|+|+.+.||.....++.+.+|. ++||||||+++..|+||||||+.||++||++|++.++
T Consensus 409 ~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~--~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 409 TFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKH--GGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp SCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCB--TTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcC--CCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhc
Confidence 35788889999999999999999999998655577888988 8999999999977889999999999999999999886
Q ss_pred hhh
Q 004948 491 ARA 493 (722)
Q Consensus 491 ~~~ 493 (722)
.+.
T Consensus 487 ~~~ 489 (495)
T 2vvm_A 487 TKR 489 (495)
T ss_dssp CC-
T ss_pred ccc
Confidence 544
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=4.3e-42 Score=385.21 Aligned_cols=419 Identities=22% Similarity=0.326 Sum_probs=291.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
++||+|||||++||+||++|+++|++|+|||+++++||++.|.+..|. .+|.|++++... .+.+..+++++|
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~g~~~~~~~-~~~~~~~~~~~g 76 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGA-------VLEIGGQWVSPD-QTALISLLDELG 76 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTE-------EEECSCCCBCTT-CHHHHHHHHHTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCc-------eeccCCeEecCc-cHHHHHHHHHcC
Confidence 379999999999999999999999999999999999999999988654 899999998765 456778999999
Q ss_pred CCeeeecC-CcceEecC-CcccCh-----hhhHHHHHHHHHHHHHHHHHHHHhhc----------cccCCCHHHHHHHHH
Q 004948 127 SLLHKVRD-KCPLYRLD-GNSVDP-----EIDMKVEADFNRLLDKASRLRQLMGE----------VAMDVSLGSALETFW 189 (722)
Q Consensus 127 l~~~~~~~-~~~~~~~~-G~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~~----------~~~~~s~~~~l~~~~ 189 (722)
+....... ...++..+ |..... +........+..++.....+...+.. ...+.++.+++...
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~- 155 (453)
T 2yg5_A 77 LKTFERYREGESVYISSAGERTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQ- 155 (453)
T ss_dssp CCEEECCCCSEEEEECTTSCEEEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHHH-
T ss_pred CcccccccCCCEEEEeCCCceeeccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHhh-
Confidence 98654322 22233332 432211 11111111112222222222221110 01245555555431
Q ss_pred HHhccCCCHHHHHHHHHHHHhhhhccch-hhHHHHHH-hhccCCCC-----CCCCCeeeeCCChHHHHHHHHHcC--Ccc
Q 004948 190 RVYWDSGNAEAMNLFNWHLANLEYANAS-LLSKLSLA-FWDQDDPY-----DMGGDHCFLPGGNGRLVQALVENV--PIL 260 (722)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~~~-~~~~~~~~-----~~~g~~~~~~gG~~~L~~aLa~~l--~I~ 260 (722)
..++....++.+.+......... .++..... ++...... ..++..++++||++.|+++|++.+ +|+
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~ 230 (453)
T 2yg5_A 156 -----SDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEALGDDVF 230 (453)
T ss_dssp -----CSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHHGGGEE
T ss_pred -----cCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhcCCcEE
Confidence 12344444444433211111111 11111110 11000000 011235789999999999998854 799
Q ss_pred cCceEEEEEecCCc-EEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccC
Q 004948 261 YEKTVHTIRYGSDG-VQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWET 339 (722)
Q Consensus 261 ln~~V~~I~~~~~~-v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~ 339 (722)
+|++|++|..++++ |.|++++++++||+||+|+|+.++.+ +.+.|.||+.+.++++++++++..||++.|+++||..
T Consensus 231 ~~~~V~~i~~~~~~~v~v~~~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~ 308 (453)
T 2yg5_A 231 LNAPVRTVKWNESGATVLADGDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRE 308 (453)
T ss_dssp CSCCEEEEEEETTEEEEEETTTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGG
T ss_pred cCCceEEEEEeCCceEEEEECCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCC
Confidence 99999999999888 88877888999999999999998874 5578999999999999999999999999999999975
Q ss_pred CCCCceeeecCCCCCcceEEEeeccccCC-CcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEE
Q 004948 340 DLDTFGHLTDDSSSRGEFFLFYSYATVAG-GPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTV 418 (722)
Q Consensus 340 ~~~~~g~l~~~~~~~~~~~~~~~~~~p~g-~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~ 418 (722)
.. ..+.+.... ....+.++.+.+++ ..++++++.++.+..|..++++++++.++++|+++|+. .+..|..+.
T Consensus 309 ~~-~~g~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~---~~~~p~~~~ 381 (453)
T 2yg5_A 309 DG-LSGTGFGAS---EVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGP---KAEEPVVYY 381 (453)
T ss_dssp GT-EEEEEECTT---SSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCG---GGGCCSEEE
T ss_pred CC-CCceeecCC---CCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCc---cCCCccEEE
Confidence 32 223332221 12233444445554 46888898888888888899999999999999999975 356788899
Q ss_pred EecCCCCCCCCcccC-CCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHh
Q 004948 419 CTRWGGDPFSLGSYS-NVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCAN 490 (722)
Q Consensus 419 ~~rW~~~p~~~G~y~-~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~ 490 (722)
.++|..+||+.|+|. ...||......+.+.+|+ +||||||++++..|+|+||||+.||++||++|++.++
T Consensus 382 ~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~--~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 382 ESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPV--GPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp ECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCB--TTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred EeecCCCCCCCCCCcCcCCCCccccchHHHhCCc--CceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 999999999999987 456775433334577887 8999999999877889999999999999999998753
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=1.9e-39 Score=368.39 Aligned_cols=421 Identities=22% Similarity=0.261 Sum_probs=285.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
.+||+|||||++||+||+.|+++|++|+|||+++++||++.|.+.... +..+|+|++++... ...+..+++++|
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~-----~~~~~~g~~~~~~~-~~~~~~~~~~~g 106 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEA-----GWYANLGPMRLPEK-HRIVREYIRKFD 106 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTT-----TEEEESSCCCEETT-CHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCC-----CchhhcCcccccch-HHHHHHHHHHhC
Confidence 489999999999999999999999999999999999999999874311 24899999999764 356788999999
Q ss_pred CCeeeecC--CcceEecCCcccCh------------h--hh---HHHHHHHHHHHHHH-HHHHH----HhhccccCCCHH
Q 004948 127 SLLHKVRD--KCPLYRLDGNSVDP------------E--ID---MKVEADFNRLLDKA-SRLRQ----LMGEVAMDVSLG 182 (722)
Q Consensus 127 l~~~~~~~--~~~~~~~~G~~~~~------------~--~~---~~~~~~~~~ll~~~-~~~~~----~~~~~~~~~s~~ 182 (722)
+....... ...++..+|..... . .. ......+...+... ..+.. ......++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 186 (498)
T 2iid_A 107 LRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTK 186 (498)
T ss_dssp CCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHHHHTTSBHH
T ss_pred CCceeecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHHHhhhhhHH
Confidence 98654432 22333334432100 0 00 00111111111110 00000 000012334555
Q ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHhhhhccchhhHHHHHHhhccCCCCCCCCCeeeeCCChHHHHHHHHHcC--Ccc
Q 004948 183 SALETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENV--PIL 260 (722)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l--~I~ 260 (722)
+++... ...+......+...+.............+...... .....+++++||++.|+++|++.+ +|+
T Consensus 187 ~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gG~~~l~~~l~~~l~~~i~ 256 (498)
T 2iid_A 187 EYLIKE-----GDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIF-----AYEKRFDEIVDGMDKLPTAMYRDIQDKVH 256 (498)
T ss_dssp HHHHHT-----SCCCHHHHHHHHHHTTCGGGTTSBHHHHHHHHHHH-----TTCCCEEEETTCTTHHHHHHHHHTGGGEE
T ss_pred HHHHHc-----cCCCHHHHHHHHHhcCcccchhHHHHHHHHHHhcc-----ccCcceEEeCCcHHHHHHHHHHhcccccc
Confidence 444321 11222222222111100000011111111111100 112457789999999999999987 699
Q ss_pred cCceEEEEEecCCcEEEEE-CCE----EEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCC
Q 004948 261 YEKTVHTIRYGSDGVQVLA-GSQ----VFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYV 335 (722)
Q Consensus 261 ln~~V~~I~~~~~~v~V~~-~G~----~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~ 335 (722)
+|++|++|..++++|.|++ +++ +++||+||+|+|+..+. .+.|.|+||+.+.+++++++|+++.||++.|+++
T Consensus 257 ~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~ 334 (498)
T 2iid_A 257 FNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTK 334 (498)
T ss_dssp SSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSC
T ss_pred cCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEEEEeCCC
Confidence 9999999999998999887 543 58999999999999886 4778899999999999999999999999999999
Q ss_pred cccCCCCCceeeecCCCCCcceEEEee-ccccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCC-
Q 004948 336 FWETDLDTFGHLTDDSSSRGEFFLFYS-YATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPE- 413 (722)
Q Consensus 336 ~w~~~~~~~g~l~~~~~~~~~~~~~~~-~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~- 413 (722)
||.+.....+....+. .....+++ ...|.+..+|++|++++.+..|..++++++++.++++|.++++.....+..
T Consensus 335 ~w~~~~~~~~~~~~~~---~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~ 411 (498)
T 2iid_A 335 FWEDDGIHGGKSTTDL---PSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSF 411 (498)
T ss_dssp GGGGGTCCSSEEEESS---TTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CccCCCccCCcccCCC---CcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhh
Confidence 9976421112222111 11233443 334667778888998888888989999999999999999999732100000
Q ss_pred CceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhh
Q 004948 414 PIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANA 491 (722)
Q Consensus 414 p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~ 491 (722)
+....+++|..+||+.|+|+++.||......+.+.+|. +||||||++++.. .|||+||+.||++||++|++.++.
T Consensus 412 ~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~--~~l~fAGe~t~~~-~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 412 CYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQ--GRIYFAGEYTAQA-HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp EEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCB--TTEEECSGGGSSS-SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCC--CcEEEEEcccccC-CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 12367899999999999999888887655567788887 8999999999864 489999999999999999998853
No 10
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=8.7e-39 Score=355.85 Aligned_cols=400 Identities=22% Similarity=0.292 Sum_probs=271.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecC---CCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKME---GGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~---g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
+||||||||++||+||++|+++|++|+|||+++++||++.+.... +. .+|+|++++.......+..++++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~-------~~~~g~~~~~~~~~~~~~~~~~~ 74 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGL-------RVEIGGAYLHRKHHPRLAAELDR 74 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTC-------EEESSCCCBCTTTCHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCc-------eEecCCeeeCCCCcHHHHHHHHH
Confidence 799999999999999999999999999999999999999998776 54 99999999987734556678889
Q ss_pred hCCCeeeecCCcceE--ecCCcccC-----hhhhHHHHHHHHHHHHHHHHHHHHh-----hccccCCCHHHHHHHHHHHh
Q 004948 125 LGSLLHKVRDKCPLY--RLDGNSVD-----PEIDMKVEADFNRLLDKASRLRQLM-----GEVAMDVSLGSALETFWRVY 192 (722)
Q Consensus 125 LGl~~~~~~~~~~~~--~~~G~~~~-----~~~~~~~~~~~~~ll~~~~~~~~~~-----~~~~~~~s~~~~l~~~~~~~ 192 (722)
+|++..........+ ..++.... ..........+..+......+.... .....+.++.+++...
T Consensus 75 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~---- 150 (431)
T 3k7m_X 75 YGIPTAAASEFTSFRHRLGPTAVDQAFPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKL---- 150 (431)
T ss_dssp HTCCEEECCCCCEECCBSCTTCCSSSSCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHH----
T ss_pred hCCeeeecCCCCcEEEEecCCeecCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhc----
Confidence 999876544332222 22332221 1111111122222221111100000 0001124555554321
Q ss_pred ccCCCHHHHHHHHHHHHhhhhccchhhHHHHHH-hhccCC-CC---CCCCCeeeeCCChHHHHHHHHHcC-CcccCceEE
Q 004948 193 WDSGNAEAMNLFNWHLANLEYANASLLSKLSLA-FWDQDD-PY---DMGGDHCFLPGGNGRLVQALVENV-PILYEKTVH 266 (722)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~-~~---~~~g~~~~~~gG~~~L~~aLa~~l-~I~ln~~V~ 266 (722)
...+....++..............++..... ++.... .+ ...... .+.+|++.+++++++.+ +|++|++|+
T Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~l~~~~~~~~g~i~~~~~V~ 227 (431)
T 3k7m_X 151 --DLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGSADLVDAMSQEIPEIRLQTVVT 227 (431)
T ss_dssp --TCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTHHHHHHHHTTCSCEESSCCEE
T ss_pred --CCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcHHHHHHHHHhhCCceEeCCEEE
Confidence 1233333333332222111111111111110 110000 00 001122 78999999999998755 899999999
Q ss_pred EEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCce
Q 004948 267 TIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFG 345 (722)
Q Consensus 267 ~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g 345 (722)
+|..++++|+|++ +|++++||+||+|+|+++++. +.|.|+||..+.++++.+.++..+||.+.|++++|. .++
T Consensus 228 ~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~----i~~ 301 (431)
T 3k7m_X 228 GIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG----IEC 301 (431)
T ss_dssp EEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT----EEE
T ss_pred EEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC----ceE
Confidence 9999988999988 777899999999999999984 678899999999999999999999999999998742 222
Q ss_pred eeecCCCCCcceEEEeecccc-CCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCC
Q 004948 346 HLTDDSSSRGEFFLFYSYATV-AGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGG 424 (722)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~p-~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~ 424 (722)
..+.. ...++++... .+..++++++.+.. +...+ ++ .+.+.|+++++. ++ |.....++|..
T Consensus 302 --~~d~~----~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~-~~---~~~~~l~~~~~~----~~-~~~~~~~~W~~ 363 (431)
T 3k7m_X 302 --VGDGI----FPTLYDYCEVSESERLLVAFTDSGS---FDPTD-IG---AVKDAVLYYLPE----VE-VLGIDYHDWIA 363 (431)
T ss_dssp --EBSSS----SSEEEEEEECSSSEEEEEEEEETTT---CCTTC-HH---HHHHHHHHHCTT----CE-EEEEECCCTTT
T ss_pred --cCCCC----EEEEEeCcCCCCCCeEEEEEecccc---CCCCC-HH---HHHHHHHHhcCC----CC-ccEeEecccCC
Confidence 22221 1122333333 55678888887664 33223 32 456677888753 22 77888899999
Q ss_pred CCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHH
Q 004948 425 DPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAH 487 (722)
Q Consensus 425 ~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~ 487 (722)
+||+.|+|++++||+....++.+.+|+ +||||||++|+..|+||||||+.||++||++|+.
T Consensus 364 d~~~~G~~~~~~~g~~~~~~~~l~~p~--g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 364 DPLFEGPWVAPRVGQFSRVHKELGEPA--GRIHFVGSDVSLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp CTTTSSSSCCCCTTTTTTSSGGGGSCB--TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCcCCCCCcccHHHHhCCC--CcEEEEehhhhccCCeEehHHHHHHHHHHHHHHh
Confidence 999999999999999877889999997 8999999999988999999999999999999986
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=8e-39 Score=362.39 Aligned_cols=425 Identities=20% Similarity=0.315 Sum_probs=279.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCC----CC------CCcceEeeccceEEcCCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGG----AG------NRISASADLGGSVLTGTLGN 116 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~----~g------n~~~~~~D~Ga~~~~~~~~~ 116 (722)
.+||+|||||++||+||++|+++|++|+|||+++++||+++|.+..+. .+ -..+..+|.|++++...+
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 88 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH-- 88 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS--
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH--
Confidence 489999999999999999999999999999999999999999876310 00 001348999999987655
Q ss_pred HHHHHHHHhCCCeeeecCC--cceEe-cC-----CcccChhhhHHHHHHHHHHHHHHHHHHHHhhcccc------CCCHH
Q 004948 117 PLGILAKQLGSLLHKVRDK--CPLYR-LD-----GNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAM------DVSLG 182 (722)
Q Consensus 117 ~l~~L~~eLGl~~~~~~~~--~~~~~-~~-----G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~------~~s~~ 182 (722)
.+..+++++|+........ ..+++ .+ |..+..+.... ..+..+.......... ..+.. +.++.
T Consensus 89 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ 165 (489)
T 2jae_A 89 ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTYRAAKA--DTFGYMSELLKKATDQ-GALDQVLSREDKDALS 165 (489)
T ss_dssp THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEHHHHHH--HHHHHHHHHHHHHHHH-TTTTTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccHHHHhh--hhhccHHHHHHHHHhc-cccccccchhhHHHHH
Confidence 6778999999987655432 23333 34 55444322111 1111111111111110 01111 11233
Q ss_pred HHHHHHHHHhccCCCHHH---HHHHHHHHH--hhh-hcc---chhhHHHHHH-hhcc---CCCCCCCCCeeeeCCChHHH
Q 004948 183 SALETFWRVYWDSGNAEA---MNLFNWHLA--NLE-YAN---ASLLSKLSLA-FWDQ---DDPYDMGGDHCFLPGGNGRL 249 (722)
Q Consensus 183 ~~l~~~~~~~~~~~~~~~---~~~~~~~~~--~~~-~~~---~~~l~~l~~~-~~~~---~~~~~~~g~~~~~~gG~~~L 249 (722)
+++.. ++....... .....|... ... ... ...+..+... ++.. .........+++++||+++|
T Consensus 166 ~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l 241 (489)
T 2jae_A 166 EFLSD----FGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMMFTPVGGMDRI 241 (489)
T ss_dssp HHHHH----HTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSEEEETTCTTHH
T ss_pred HHHHH----hhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccEEeecCCHHHH
Confidence 33322 111110000 000000000 000 000 0012222211 1110 01122334678999999999
Q ss_pred HHHHHHcCC---cccCceEEEEEecCCcEEEEE-CC---EEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCC
Q 004948 250 VQALVENVP---ILYEKTVHTIRYGSDGVQVLA-GS---QVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGY 322 (722)
Q Consensus 250 ~~aLa~~l~---I~ln~~V~~I~~~~~~v~V~~-~G---~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~ 322 (722)
+++|++.+. |++|++|++|..++++|+|++ +| ++++||+||+|+|+.++.. +.+ +||+.+.+++++++|
T Consensus 242 ~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~~~~~l~~~~~ 317 (489)
T 2jae_A 242 YYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLPGDVLTALKAAKP 317 (489)
T ss_dssp HHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHHHHHHHHTEEC
T ss_pred HHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHHHHHHHHhCCC
Confidence 999998764 999999999999999999887 55 6899999999999999875 333 789999999999999
Q ss_pred CceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEeeccc-c-CCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHH
Q 004948 323 GLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYAT-V-AGGPLLIALVAGEAAHKFESMPPTDAVTKVLQIL 400 (722)
Q Consensus 323 ~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~~-p-~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L 400 (722)
++..||++.|+++||.+....+|.+.... .....++++... + +...++.+|+.+..+..|..++++++++.++++|
T Consensus 318 ~~~~kv~l~~~~~~w~~~~~~~g~~~~~~--~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L 395 (489)
T 2jae_A 318 SSSGKLGIEYSRRWWETEDRIYGGASNTD--KDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEG 395 (489)
T ss_dssp CCEEEEEEEESSCHHHHTTCCCSCEEEES--STTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCCccCCCCcccccccCC--CCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHH
Confidence 99999999999999976545554332211 112233333221 1 2233444688888888899999999999999999
Q ss_pred HhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCC------CCCCCccHHHHhcccCCCcEEEcccccccccCccchHH
Q 004948 401 KGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVA------VGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGA 474 (722)
Q Consensus 401 ~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~------pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGA 474 (722)
++++|.. ....+.....++|.++||+.|+|..+. ||.....++.+.+|. +||||||++++. +.++|+||
T Consensus 396 ~~~~~~~--~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~l~faG~~~~~-~~~~v~gA 470 (489)
T 2jae_A 396 SEIHGEK--YTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPV--DKIYFAGDHLSN-AIAWQHGA 470 (489)
T ss_dssp HHHHCGG--GGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCB--TTEEECSGGGBS-STTSHHHH
T ss_pred HHHcCcc--hhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCC--CcEEEeEHHhcc-CccHHHHH
Confidence 9999740 123566777889999999999998776 787656677888887 899999999974 57899999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 004948 475 FLSGLRETAKMAHCANA 491 (722)
Q Consensus 475 i~SG~~AA~~Il~~l~~ 491 (722)
+.||++||++|++.+..
T Consensus 471 i~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 471 LTSARDVVTHIHERVAQ 487 (489)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999987754
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.9e-37 Score=348.20 Aligned_cols=408 Identities=20% Similarity=0.211 Sum_probs=274.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC------CcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG------FRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGI 120 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G------~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~ 120 (722)
++||+|||||++||+||++|+++| ++|+|||+++++||+++|....|. .+|.|++++...+. .+..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~-------~~d~G~~~~~~~~~-~~~~ 76 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGY-------IIERGPDSFLERKK-SAPQ 76 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTC-------CEESSCCCEETTCT-HHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCE-------EeccChhhhhhCCH-HHHH
Confidence 479999999999999999999999 999999999999999999988765 99999999887754 4677
Q ss_pred HHHHhCCCeeeec--CCcceEecCCcccChhhhH------HHHHH-HHHHHH---HHHHHHHHhh---ccccCCCHHHHH
Q 004948 121 LAKQLGSLLHKVR--DKCPLYRLDGNSVDPEIDM------KVEAD-FNRLLD---KASRLRQLMG---EVAMDVSLGSAL 185 (722)
Q Consensus 121 L~~eLGl~~~~~~--~~~~~~~~~G~~~~~~~~~------~~~~~-~~~ll~---~~~~~~~~~~---~~~~~~s~~~~l 185 (722)
+++++|+...... ....+++.+|.....+... ..... ...++. ........+. ...++.++.+++
T Consensus 77 l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 156 (470)
T 3i6d_A 77 LVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFF 156 (470)
T ss_dssp HHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSHHHHHHHHSCCCSSSSCCBHHHHH
T ss_pred HHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHHHHH
Confidence 9999999754432 2334445555543322110 00000 001111 1111111111 113456677666
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHhhhhccchhhHHHHHH-hhcc----CC------------------CCCCCCCeeee
Q 004948 186 ETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLA-FWDQ----DD------------------PYDMGGDHCFL 242 (722)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~----~~------------------~~~~~g~~~~~ 242 (722)
... + .......++.+............++..... .+.. .. .....+.++++
T Consensus 157 ~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (470)
T 3i6d_A 157 RRR---V---GDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL 230 (470)
T ss_dssp HHH---S---CHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE
T ss_pred HHh---c---CHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe
Confidence 431 1 111122223333222222121111111000 0000 00 00113467789
Q ss_pred CCChHHHHHHHHHcC---CcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHH
Q 004948 243 PGGNGRLVQALVENV---PILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIK 318 (722)
Q Consensus 243 ~gG~~~L~~aLa~~l---~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~ 318 (722)
++|++.|+++|++.+ +|++|++|++|..++++|+|++ +|++++||+||+|+|+..+.+ +...| | ..++++
T Consensus 231 ~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~--~--~~~~~~ 304 (470)
T 3i6d_A 231 STGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG--MLSEL--P--AISHLK 304 (470)
T ss_dssp TTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH--HTTTS--T--THHHHH
T ss_pred CChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH--HcCCc--h--hhHHHh
Confidence 999999999999988 5999999999999999999988 787999999999999999886 22222 2 357889
Q ss_pred hcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEe-----eccccCCCcEEEEEecchhhhhhcCCCHHHHH
Q 004948 319 RLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFY-----SYATVAGGPLLIALVAGEAAHKFESMPPTDAV 393 (722)
Q Consensus 319 ~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~-----~~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~ 393 (722)
++++.++.+|++.|++++|..+...++++.+.........+.| +...|.+..++++++.+..+..+..+++++++
T Consensus 305 ~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 384 (470)
T 3i6d_A 305 NMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDII 384 (470)
T ss_dssp TCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHH
T ss_pred cCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHH
Confidence 9999999999999999999877677888876543322222222 33456677788898887777778889999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCC---ccHHHHhcccCCCcEEEcccccccccCcc
Q 004948 394 TKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASG---DDYDIMAESVGDGRLFFAGEATIRRYPAT 470 (722)
Q Consensus 394 ~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~---~~~~~l~~pv~~~~L~fAGd~ts~~~~g~ 470 (722)
+.++++|.++||.. ++|....+++|.. ++..+.+|... ..++.+.+|. +||||||+++.. .+
T Consensus 385 ~~~~~~l~~~~g~~----~~p~~~~~~~w~~------a~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g---~g 449 (470)
T 3i6d_A 385 NIVLEDLKKVMNIN----GEPEMTCVTRWHE------SMPQYHVGHKQRIKELREALASAY--PGVYMTGASFEG---VG 449 (470)
T ss_dssp HHHHHHHGGGSCCC----SCCSEEEEEEEEE------EEEECBTTHHHHHHHHHHHHHHHS--TTEEECSTTTSC---CS
T ss_pred HHHHHHHHHHhCCC----CCceEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhhC--CCEEEEeecCCC---CC
Confidence 99999999999752 5788889999964 33334455421 2334566777 899999999863 36
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 004948 471 MHGAFLSGLRETAKMAHCA 489 (722)
Q Consensus 471 ~eGAi~SG~~AA~~Il~~l 489 (722)
|++|+.||+++|++|++.+
T Consensus 450 v~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 450 IPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1e-36 Score=343.87 Aligned_cols=413 Identities=16% Similarity=0.143 Sum_probs=268.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
++||+|||||++||+||++|+++|++|+|||+++++|||++|.+..|. .+|.|++++... ...+..+++++|
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~-------~~~~g~~~~~~~-~~~~~~~~~~~g 87 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGY-------LVEQGPNSFLDR-EPATRALAAALN 87 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTE-------EEESSCCCEETT-CHHHHHHHHHTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCe-------eeecChhhhhhh-hHHHHHHHHHcC
Confidence 489999999999999999999999999999999999999999998765 999999999875 356778999999
Q ss_pred CCeeeec----CCcceEecCCcccChhhhHHHH--HHHHHHHHHHHHHHHHhhc---cccCCCHHHHHHHHHHHhccCCC
Q 004948 127 SLLHKVR----DKCPLYRLDGNSVDPEIDMKVE--ADFNRLLDKASRLRQLMGE---VAMDVSLGSALETFWRVYWDSGN 197 (722)
Q Consensus 127 l~~~~~~----~~~~~~~~~G~~~~~~~~~~~~--~~~~~ll~~~~~~~~~~~~---~~~~~s~~~~l~~~~~~~~~~~~ 197 (722)
+...... ....+++.+|..+..+.+.... ..+..+......+...+.. ..++.++.++++.. +. .
T Consensus 88 l~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~~---~ 161 (478)
T 2ivd_A 88 LEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRH---LG---H 161 (478)
T ss_dssp CGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHH---TC---H
T ss_pred CcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHh---hC---H
Confidence 9743321 2234555677654433221100 0000001111111111111 13456777776531 11 1
Q ss_pred HHHHHHHHHHHHhhhhccchh--------------------hHHHHHHh--hc-----cCCCCCCCCCeeeeCCChHHHH
Q 004948 198 AEAMNLFNWHLANLEYANASL--------------------LSKLSLAF--WD-----QDDPYDMGGDHCFLPGGNGRLV 250 (722)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~--------------------l~~l~~~~--~~-----~~~~~~~~g~~~~~~gG~~~L~ 250 (722)
+....++.+.+.......... +..+.... .. ....+...+..+++++|+++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~ 241 (478)
T 2ivd_A 162 RATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLI 241 (478)
T ss_dssp HHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHH
T ss_pred HHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHH
Confidence 111122222221111111000 00000000 00 0000111156789999999999
Q ss_pred HHHHHcC--CcccCceEEEEEecCCcEEEEE----CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCc
Q 004948 251 QALVENV--PILYEKTVHTIRYGSDGVQVLA----GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGL 324 (722)
Q Consensus 251 ~aLa~~l--~I~ln~~V~~I~~~~~~v~V~~----~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~ 324 (722)
++|++.+ +|+++++|++|..++++|.|++ +|++++||+||+|+|+..+.+ +.|++|+.+.++++++++++
T Consensus 242 ~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~----ll~~l~~~~~~~l~~~~~~~ 317 (478)
T 2ivd_A 242 DALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK----LLRPLDDALAALVAGIAYAP 317 (478)
T ss_dssp HHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHH----HHTTTCHHHHHHHHTCCBCC
T ss_pred HHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHH----HhhccCHHHHHHHhcCCCCc
Confidence 9998865 7999999999999888888875 567899999999999999875 44789999999999999999
Q ss_pred eeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEeec-----cccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHH
Q 004948 325 LNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSY-----ATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQI 399 (722)
Q Consensus 325 ~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~-----~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~ 399 (722)
..+|++.|++++|..+ ..++.+.+.........+.++. ..|++..++++++.+..+..+..++++++++.++++
T Consensus 318 ~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (478)
T 2ivd_A 318 IAVVHLGFDAGTLPAP-DGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREE 396 (478)
T ss_dssp EEEEEEEECTTSSCCC-CSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHH
T ss_pred EEEEEEEEccccCCCC-CceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHH
Confidence 9999999999999754 4566554321112222233322 235566788888888777777788999999999999
Q ss_pred HHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccC-CCcEEEcccccccccCccchHHHHHH
Q 004948 400 LKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVG-DGRLFFAGEATIRRYPATMHGAFLSG 478 (722)
Q Consensus 400 L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~-~~~L~fAGd~ts~~~~g~~eGAi~SG 478 (722)
|.++++.. ..|....+++|.. +|..+.||... ....+..+.. .+||||||+++.. ++|+||+.||
T Consensus 397 l~~~~~~~----~~p~~~~~~~w~~------~~p~~~~g~~~-~~~~~~~~~~~~~~l~~aG~~~~g---~gv~gA~~SG 462 (478)
T 2ivd_A 397 LKALAGVT----ARPSFTRVFRWPL------GIPQYNLGHLE-RVAAIDAALQRLPGLHLIGNAYKG---VGLNDCIRNA 462 (478)
T ss_dssp HHHHHCCC----SCCSEEEEEEESS------CCBCCBTTHHH-HHHHHHHHHHTSTTEEECSTTTSC---CSHHHHHHHH
T ss_pred HHHHhCCC----CCCcEEEEEECCC------cccCCCcCHHH-HHHHHHHHHhhCCCEEEEccCCCC---CCHHHHHHHH
Confidence 99999753 3577777889965 34344555421 1111211111 2799999999842 4699999999
Q ss_pred HHHHHHHHHHHhhh
Q 004948 479 LRETAKMAHCANAR 492 (722)
Q Consensus 479 ~~AA~~Il~~l~~~ 492 (722)
++||++|+..++.+
T Consensus 463 ~~aA~~i~~~l~~~ 476 (478)
T 2ivd_A 463 AQLADALVAGNTSH 476 (478)
T ss_dssp HHHHHHHCC-----
T ss_pred HHHHHHHHHhhccC
Confidence 99999998776543
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=3.5e-36 Score=341.87 Aligned_cols=415 Identities=19% Similarity=0.170 Sum_probs=269.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHh
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQL 125 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eL 125 (722)
+++||+|||||++||+||++|+++|++|+|||+++++||+++|.+..|. .+|.|++++...+ ..+..+++++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~g~~~~~~~~-~~~~~~~~~l 83 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGL-------IWDEGANTMTESE-GDVTFLIDSL 83 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTE-------EEESSCCCBCCCS-HHHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCe-------EEecCCcccccCc-HHHHHHHHHc
Confidence 3589999999999999999999999999999999999999999998765 9999999997654 5577899999
Q ss_pred CCCeeeec---CCcceEecCCcccChhhhHHHHHH--HHHHHHHHHHHHHHh-h-------ccccCCCHHHHHHHHHHHh
Q 004948 126 GSLLHKVR---DKCPLYRLDGNSVDPEIDMKVEAD--FNRLLDKASRLRQLM-G-------EVAMDVSLGSALETFWRVY 192 (722)
Q Consensus 126 Gl~~~~~~---~~~~~~~~~G~~~~~~~~~~~~~~--~~~ll~~~~~~~~~~-~-------~~~~~~s~~~~l~~~~~~~ 192 (722)
|+...... ....++..+|..+..+.+...... +.........+...+ . ....+.++.+++... +
T Consensus 84 gl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~ 160 (504)
T 1sez_A 84 GLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRH---F 160 (504)
T ss_dssp TCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHH---H
T ss_pred CCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHHH---c
Confidence 99754332 223445667766543322110000 000000000000000 0 013456777776532 1
Q ss_pred ccCCCHHHHHHHHHHHHhhhhccchhh--------------------HHHHHHhhccCC-----------CCCCCCCeee
Q 004948 193 WDSGNAEAMNLFNWHLANLEYANASLL--------------------SKLSLAFWDQDD-----------PYDMGGDHCF 241 (722)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------------~~l~~~~~~~~~-----------~~~~~g~~~~ 241 (722)
+ .+....++.+............+ ..+....+.... ........++
T Consensus 161 ~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (504)
T 1sez_A 161 G---KEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFS 237 (504)
T ss_dssp C---HHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBE
T ss_pred C---HHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEe
Confidence 1 11112222222211111111110 000000000000 0001234678
Q ss_pred eCCChHHHHHHHHHcC---CcccCceEEEEEecCCc------EEEEE---CC---EEEEeCEEEEcCChhhhhcCCcc-c
Q 004948 242 LPGGNGRLVQALVENV---PILYEKTVHTIRYGSDG------VQVLA---GS---QVFEGDMVLCTVPLGVLKSGSIK-F 305 (722)
Q Consensus 242 ~~gG~~~L~~aLa~~l---~I~ln~~V~~I~~~~~~------v~V~~---~G---~~~~AD~VI~AvP~~~l~~~~i~-~ 305 (722)
++||+++|+++|++.+ +|++|++|++|..++++ +.|++ +| ++++||+||+|+|+..+.+.... .
T Consensus 238 ~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~ 317 (504)
T 1sez_A 238 FLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKR 317 (504)
T ss_dssp ETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESS
T ss_pred eCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhccc
Confidence 9999999999999876 59999999999998877 77766 34 57899999999999999862210 1
Q ss_pred CCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCC---CcceE-E----EeeccccCCCcEEEEEec
Q 004948 306 IPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSS---RGEFF-L----FYSYATVAGGPLLIALVA 377 (722)
Q Consensus 306 ~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~---~~~~~-~----~~~~~~p~g~~vl~~~v~ 377 (722)
.+++++. .+.++++.++.+|++.|++++|..+...++++.+.... ..... . .++...|++..++++|+.
T Consensus 318 ~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~ 394 (504)
T 1sez_A 318 GNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVG 394 (504)
T ss_dssp SSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEE
T ss_pred CCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeC
Confidence 1234332 26678888999999999999998766677776653221 01111 1 223345667778899998
Q ss_pred chhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCc--cHHHHhcccCCCc
Q 004948 378 GEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD--DYDIMAESVGDGR 455 (722)
Q Consensus 378 g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~--~~~~l~~pv~~~~ 455 (722)
+..+..|..++++++++.++++|+++++.. ..|....+.+|.. +|..+.+|.... ......+|+ +|
T Consensus 395 g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~----~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~~--~~ 462 (504)
T 1sez_A 395 GSRNRELAKASRTELKEIVTSDLKQLLGAE----GEPTYVNHLYWSK------AFPLYGHNYDSVLDAIDKMEKNL--PG 462 (504)
T ss_dssp STTCGGGTTCCHHHHHHHHHHHHHHHHCBC----SCCSSEEEEEEEE------EEECCCTTHHHHHHHHHHHHHHS--TT
T ss_pred CCCcccccCCCHHHHHHHHHHHHHHHhCCC----CCCeEEEEeECCC------CCCccCcCHHHHHHHHHHHHHhC--CC
Confidence 888888888999999999999999999853 3577788899965 333344443211 112345666 89
Q ss_pred EEEcccccccccCccchHHHHHHHHHHHHHHHHHhhh
Q 004948 456 LFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (722)
Q Consensus 456 L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (722)
|||||++++. ++|+||+.||++||++|++.++..
T Consensus 463 l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 463 LFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp EEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999972 589999999999999999987543
No 15
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=3.6e-35 Score=331.10 Aligned_cols=407 Identities=18% Similarity=0.147 Sum_probs=270.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
++||+|||||++||+||++|+++| ++|+|||+++++||++.|....|. .+|.|++++...+ ..+..++++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~g~~~~~~~~-~~~~~l~~~ 75 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGF-------TIERGPDSYVARK-HILTDLIEA 75 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTC-------CEESSCCCEETTS-THHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCE-------EEecCchhhhccc-HHHHHHHHH
Confidence 389999999999999999999999 999999999999999999988765 9999999987765 447779999
Q ss_pred hCCCeeeec--CCcceEecCCcccChhhhH------HHHHHH----HHHHHHHHHHHHHhh---c----cccCCCHHHHH
Q 004948 125 LGSLLHKVR--DKCPLYRLDGNSVDPEIDM------KVEADF----NRLLDKASRLRQLMG---E----VAMDVSLGSAL 185 (722)
Q Consensus 125 LGl~~~~~~--~~~~~~~~~G~~~~~~~~~------~~~~~~----~~ll~~~~~~~~~~~---~----~~~~~s~~~~l 185 (722)
+|+...... ....+++.+|.....+... .....+ ....... .+...+. . ..++.++.+++
T Consensus 76 lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~l 154 (475)
T 3lov_A 76 IGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ-EVADLLLHPSDSLRIPEQDIPLGEYL 154 (475)
T ss_dssp TTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHH-HHHHHHHSCCTTCCCCSSCCBHHHHH
T ss_pred cCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHH-HhhCcccCCcccccCCCCCcCHHHHH
Confidence 999865442 2333444555443321100 000000 0000011 1111111 1 23566777776
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHhhhhccchhhH------HH----------HHHhhccC---------C-CCCCCCCe
Q 004948 186 ETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLS------KL----------SLAFWDQD---------D-PYDMGGDH 239 (722)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~l----------~~~~~~~~---------~-~~~~~g~~ 239 (722)
... ++ ......++.+.+..........++ .+ ........ . ....++.+
T Consensus 155 ~~~---~~---~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (475)
T 3lov_A 155 RPR---LG---DALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQF 228 (475)
T ss_dssp HHH---HC---HHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSE
T ss_pred HHH---hC---HHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcE
Confidence 531 11 111222233332222111111110 00 00000000 0 00124567
Q ss_pred eeeCCChHHHHHHHHHcC---CcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHH
Q 004948 240 CFLPGGNGRLVQALVENV---PILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLD 315 (722)
Q Consensus 240 ~~~~gG~~~L~~aLa~~l---~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ 315 (722)
+++++|++.|+++|++.+ +|++|++|++|..++++|+|++ +| +++||+||+|+|+..+.+ +...+++ +
T Consensus 229 ~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~~~-----~ 300 (475)
T 3lov_A 229 LSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ--LLPDAHL-----P 300 (475)
T ss_dssp EEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH--HCTTSCC-----H
T ss_pred EeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH--HcCccCH-----H
Confidence 889999999999999987 6999999999999999999988 66 899999999999999886 2222322 6
Q ss_pred HHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEee-----ccccCCCcEEEEEecchhhhhhcCCCHH
Q 004948 316 AIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYS-----YATVAGGPLLIALVAGEAAHKFESMPPT 390 (722)
Q Consensus 316 ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~-----~~~p~g~~vl~~~v~g~~a~~~~~ls~e 390 (722)
+++++++.++.+|++.|++++ ..+...++++.+.........+.++ ...|. ..++.+++.+..+..+..++++
T Consensus 301 ~~~~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~e 378 (475)
T 3lov_A 301 ELEQLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESDE 378 (475)
T ss_dssp HHHTCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCHH
T ss_pred HHhcCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCHH
Confidence 789999999999999999998 4455677887765433322222332 22333 5678888877777778889999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCC---CccHHHHhcccCCCcEEEccccccccc
Q 004948 391 DAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGAS---GDDYDIMAESVGDGRLFFAGEATIRRY 467 (722)
Q Consensus 391 el~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~---~~~~~~l~~pv~~~~L~fAGd~ts~~~ 467 (722)
++++.++++|.++||.. +.|....+++|... +..+.+|.. ...++.+.+|+ +||||||+++..
T Consensus 379 ~~~~~~~~~L~~~~g~~----~~p~~~~v~~w~~a------~p~~~~g~~~~~~~~~~~l~~~~--~~l~~aG~~~~g-- 444 (475)
T 3lov_A 379 VLQQAVLQDLEKICGRT----LEPKQVIISRLMDG------LPAYTVGHADRIQRVREEVLAQY--PGIYLAGLAYDG-- 444 (475)
T ss_dssp HHHHHHHHHHHHHHSSC----CCCSEEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHHS--TTEEECSTTTSC--
T ss_pred HHHHHHHHHHHHHhCCC----CCCeEEEEEEcccC------CCCCCCChHHHHHHHHHHHHhhC--CCEEEEccCCCC--
Confidence 99999999999999853 47888899999763 223344432 12344566777 899999999973
Q ss_pred CccchHHHHHHHHHHHHHHHHHhhhh
Q 004948 468 PATMHGAFLSGLRETAKMAHCANARA 493 (722)
Q Consensus 468 ~g~~eGAi~SG~~AA~~Il~~l~~~~ 493 (722)
.+|++|+.||+++|++|++.++...
T Consensus 445 -~g~~~a~~sG~~aA~~i~~~l~~~~ 469 (475)
T 3lov_A 445 -VGLPDCVASAKTMIESIELEQSHTD 469 (475)
T ss_dssp -SSHHHHHHHHHHHHHHHHHTC----
T ss_pred -CCHHHHHHHHHHHHHHHHHHhhccc
Confidence 4799999999999999998775543
No 16
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=7.5e-35 Score=337.69 Aligned_cols=258 Identities=14% Similarity=0.115 Sum_probs=188.0
Q ss_pred CCCeeeeCCChHHHHHHHHHcC----CcccCceEE--EEEecCCc-------EEEEE--CCE--EEEeCEEEEcCChhhh
Q 004948 236 GGDHCFLPGGNGRLVQALVENV----PILYEKTVH--TIRYGSDG-------VQVLA--GSQ--VFEGDMVLCTVPLGVL 298 (722)
Q Consensus 236 ~g~~~~~~gG~~~L~~aLa~~l----~I~ln~~V~--~I~~~~~~-------v~V~~--~G~--~~~AD~VI~AvP~~~l 298 (722)
+..++.+.||+++|+++|++.+ .|+++++|+ +|...+++ |+|++ +|+ +++||+||+|+|+.++
T Consensus 336 ~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L 415 (721)
T 3ayj_A 336 SNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQL 415 (721)
T ss_dssp TCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHH
T ss_pred ccceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHH
Confidence 3457889999999999998764 599999999 99987655 88855 566 7899999999999998
Q ss_pred hc----CCcc-------c--------------CCC-C-C-------HHHHHHHHhcCCCceeEEEEEc-----CCCcccC
Q 004948 299 KS----GSIK-------F--------------IPE-L-P-------QRKLDAIKRLGYGLLNKVAMLF-----PYVFWET 339 (722)
Q Consensus 299 ~~----~~i~-------~--------------~p~-L-p-------~~~~~ai~~l~~~~~~kV~l~f-----~~~~w~~ 339 (722)
.. ..|. + .|+ | | ..+.+++++++|+...||++.| +++||.+
T Consensus 416 ~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~ 495 (721)
T 3ayj_A 416 TPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQ 495 (721)
T ss_dssp HHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCE
T ss_pred hhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccc
Confidence 52 2344 2 344 6 8 8999999999999999999999 9999987
Q ss_pred CCC-CceeeecCCCCCcceEEEe-----eccccCCCcEEEEEecchhhhhh------cCCCHHHH-------HHHHHHHH
Q 004948 340 DLD-TFGHLTDDSSSRGEFFLFY-----SYATVAGGPLLIALVAGEAAHKF------ESMPPTDA-------VTKVLQIL 400 (722)
Q Consensus 340 ~~~-~~g~l~~~~~~~~~~~~~~-----~~~~p~g~~vl~~~v~g~~a~~~------~~ls~eel-------~~~vl~~L 400 (722)
+.. ..+....+...+ ..+++. ++..+..+.++.+|++++.+..| ..+++++. ++.++++|
T Consensus 496 ~~g~~i~~s~TD~~~r-~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~l 574 (721)
T 3ayj_A 496 WRGEPIKAVVSDSGLA-ASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRA 574 (721)
T ss_dssp ETTEECCEEEETTTTE-EEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHT
T ss_pred cCCCCceeeecCCCcc-eEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHH
Confidence 511 111222222111 112221 22223334578889999999888 56666666 99999999
Q ss_pred H--hhcCCCCC----------CCCCCceEEEecCCCCCCCCcccCCCCCCCCCc--cHHH----HhcccCCCcEEEcccc
Q 004948 401 K--GIYEPKGI----------NVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD--DYDI----MAESVGDGRLFFAGEA 462 (722)
Q Consensus 401 ~--~i~~~~~~----------~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~--~~~~----l~~pv~~~~L~fAGd~ 462 (722)
. ++++.... ..-.+.+...++|..+| +.|+|..+.||+... .+.. ...|..++|||||||+
T Consensus 575 a~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~ 653 (721)
T 3ayj_A 575 YRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDS 653 (721)
T ss_dssp CCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGG
T ss_pred hhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehh
Confidence 9 88864210 00013456889999999 999999999998310 0111 1123345899999999
Q ss_pred cccccCccchHHHHHHHHHHHHHHHHHhhhhhhh
Q 004948 463 TIRRYPATMHGAFLSGLRETAKMAHCANARALRM 496 (722)
Q Consensus 463 ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~~~ 496 (722)
++. ++||||||+.||.+||..|+..++......
T Consensus 654 ~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~~~~ 686 (721)
T 3ayj_A 654 YSH-LGGWLEGAFMSALNAVAGLIVRANRGDVSA 686 (721)
T ss_dssp GSS-CTTSHHHHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred hcc-CCceehHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 985 689999999999999999999998776644
No 17
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=323.67 Aligned_cols=407 Identities=18% Similarity=0.195 Sum_probs=262.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCC--CcHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTL--GNPLGILA 122 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~--~~~l~~L~ 122 (722)
++||+|||||++||+||++|+++|+ +|+|||+++++||+++|....++ ..+|.|++++.... ...+..++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g------~~~d~G~~~~~~~~~~~~~~~~l~ 75 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNG------AIFELGPRGIRPAGALGARTLLLV 75 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTS------CEEESSCCCBCCCHHHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCC------eEEEeCCCcccCCCcccHHHHHHH
Confidence 3799999999999999999999999 99999999999999999876422 39999999885431 23456799
Q ss_pred HHhCCCeeeec--C-----CcceEecCCcccChhhhHH--HH--HHHHHHHHHHHHHHHHh--hccccCCCHHHHHHHHH
Q 004948 123 KQLGSLLHKVR--D-----KCPLYRLDGNSVDPEIDMK--VE--ADFNRLLDKASRLRQLM--GEVAMDVSLGSALETFW 189 (722)
Q Consensus 123 ~eLGl~~~~~~--~-----~~~~~~~~G~~~~~~~~~~--~~--~~~~~ll~~~~~~~~~~--~~~~~~~s~~~~l~~~~ 189 (722)
+++|+...... . ...+.+.+|.....+.... .. ..+... .....+.... .....+.++.+++...
T Consensus 76 ~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~- 153 (477)
T 3nks_A 76 SELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKP-LFWAGLRELTKPRGKEPDETVHSFAQRR- 153 (477)
T ss_dssp HHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSC-SSHHHHTTTTSCCCCSSCCBHHHHHHHH-
T ss_pred HHcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhH-HHHHHHHhhhcCCCCCCCcCHHHHHHHh-
Confidence 99999843321 1 1123444555432211100 00 000000 0000011111 1113456777666531
Q ss_pred HHhccCCCHHHHHHHHHHHHhhhhccchhhHH----------------HHHHhhccCCC------------CCCCCCeee
Q 004948 190 RVYWDSGNAEAMNLFNWHLANLEYANASLLSK----------------LSLAFWDQDDP------------YDMGGDHCF 241 (722)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------l~~~~~~~~~~------------~~~~g~~~~ 241 (722)
++. .....++.+............++. +....+..... .......++
T Consensus 154 --~g~---~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (477)
T 3nks_A 154 --LGP---EVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWS 228 (477)
T ss_dssp --HCH---HHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEE
T ss_pred --hCH---HHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEE
Confidence 110 111111222211111111110000 00000000000 001235788
Q ss_pred eCCChHHHHHHHHH-----cCCcccCceEEEEEecCCc-EEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHH
Q 004948 242 LPGGNGRLVQALVE-----NVPILYEKTVHTIRYGSDG-VQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLD 315 (722)
Q Consensus 242 ~~gG~~~L~~aLa~-----~l~I~ln~~V~~I~~~~~~-v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ 315 (722)
+++|++.|+++|++ |++|++|++|++|..++++ |.|++++++++||+||+|+|+..+.+ +.+++++...+
T Consensus 229 ~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~~~~ad~vv~a~p~~~~~~----ll~~~~~~~~~ 304 (477)
T 3nks_A 229 LRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSE----LLPAEAAPLAR 304 (477)
T ss_dssp ETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSCEEEESEEEECSCHHHHHH----HSCGGGHHHHH
T ss_pred ECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCeEEEcCEEEECCCHHHHHH----hccccCHHHHH
Confidence 99999999999977 4589999999999998777 88877777899999999999999876 45666677888
Q ss_pred HHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEeecc------ccCCCcEEEEEecchhhhhhc----
Q 004948 316 AIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYA------TVAGGPLLIALVAGEAAHKFE---- 385 (722)
Q Consensus 316 ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~------~p~g~~vl~~~v~g~~a~~~~---- 385 (722)
.+.++++.++.+|++.|++++|.. ..+|++.+.........+.++.. .+++..++++++.+..+..+.
T Consensus 305 ~l~~~~~~~~~~v~l~~~~~~~~~--~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~ 382 (477)
T 3nks_A 305 ALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGC 382 (477)
T ss_dssp HHHTCCEEEEEEEEEEETTCCCSS--CSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSC
T ss_pred HHhcCCCCcEEEEEEEECCCCCCC--CCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccC
Confidence 999999999999999999999953 46788876544333334444321 133667888999877665553
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCc---cHHHHhcccCCCcEEEcccc
Q 004948 386 SMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGD---DYDIMAESVGDGRLFFAGEA 462 (722)
Q Consensus 386 ~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~---~~~~l~~pv~~~~L~fAGd~ 462 (722)
.++++++++.++++|.++++.. +.|....+++|.. ++..+.+|.... ....+... .++|++||+|
T Consensus 383 ~~~~~~~~~~~~~~L~~~~g~~----~~~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~--~~~l~l~G~~ 450 (477)
T 3nks_A 383 VLSQELFQQRAQEAAATQLGLK----EMPSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAH--RLPLTLAGAS 450 (477)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCC----SCCSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHT--TCSEEECSTT
T ss_pred CCCHHHHHHHHHHHHHHHhCCC----CCCcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhc--CCCEEEEccC
Confidence 4689999999999999999752 5678888999965 555555665321 11223322 2689999999
Q ss_pred cccccCccchHHHHHHHHHHHHHHH
Q 004948 463 TIRRYPATMHGAFLSGLRETAKMAH 487 (722)
Q Consensus 463 ts~~~~g~~eGAi~SG~~AA~~Il~ 487 (722)
+.. .+|++|+.||++||++|+.
T Consensus 451 ~~G---~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 451 YEG---VAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TSC---CSHHHHHHHHHHHHHHHHH
T ss_pred CCC---CcHHHHHHHHHHHHHHHHh
Confidence 863 4799999999999999986
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2.3e-32 Score=310.12 Aligned_cols=421 Identities=17% Similarity=0.158 Sum_probs=204.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
+++|||||||++||+||++|+++|++|+|||+++++||+++|++.+|+ .+|.|++++... ..+..+++.+|
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~-------~~D~G~~~~~~~--~~~~~l~~~~g 71 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGF-------TFDAGPTVITDP--SAIEELFALAG 71 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTE-------EEECSCCCBSCT--HHHHHHHHTTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCE-------EEecCceeecCc--hhHHHHHHHhc
Confidence 478999999999999999999999999999999999999999998876 999999998653 45667778777
Q ss_pred CC------eeeecCCcceEecCCcccChhhhHH-HH-----------HHHHHHHHHHHHHHHHhhcc------ccCCCHH
Q 004948 127 SL------LHKVRDKCPLYRLDGNSVDPEIDMK-VE-----------ADFNRLLDKASRLRQLMGEV------AMDVSLG 182 (722)
Q Consensus 127 l~------~~~~~~~~~~~~~~G~~~~~~~~~~-~~-----------~~~~~ll~~~~~~~~~~~~~------~~~~s~~ 182 (722)
.. ..+......+.+.+|..+..+.+.. .. ..+.++++.. +...... ....+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 148 (501)
T 4dgk_A 72 KQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYS---RAVFKEGYLKLGTVPFLSFR 148 (501)
T ss_dssp CCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHH---HHHTSSSCC--CCCCCCCHH
T ss_pred chhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHH---HHhhhhhhhhccccccchhh
Confidence 53 2233344445666776654432221 11 1112222211 1111110 1112222
Q ss_pred HHH------------HHHHHHhcc-CCCHHHHHHHHHHHHhhhhccchhhHHHHHHhhccCCCCCCCCCeeeeCCChHHH
Q 004948 183 SAL------------ETFWRVYWD-SGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRL 249 (722)
Q Consensus 183 ~~l------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~~~~~~gG~~~L 249 (722)
+.+ ..+.+.... ..++..+.++.+...............+....+. ....+.++++||+++|
T Consensus 149 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~-----~~~~G~~~p~GG~~~l 223 (501)
T 4dgk_A 149 DMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHAL-----EREWGVWFPRGGTGAL 223 (501)
T ss_dssp HHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHH-----HSCCCEEEETTHHHHH
T ss_pred hhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhh-----hccCCeEEeCCCCcch
Confidence 221 112222222 2234444444433221111110000001111111 1123467899999999
Q ss_pred HHHHHH-----cCCcccCceEEEEEecCCcEE-EEE-CCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCC
Q 004948 250 VQALVE-----NVPILYEKTVHTIRYGSDGVQ-VLA-GSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGY 322 (722)
Q Consensus 250 ~~aLa~-----~l~I~ln~~V~~I~~~~~~v~-V~~-~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~ 322 (722)
+++|++ |.+|++|++|++|..++++++ |++ +|+++.||.||+++++..+.+.++. ...++....+.+++.++
T Consensus 224 ~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~ 302 (501)
T 4dgk_A 224 VQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS-QHPAAVKQSNKLQTKRM 302 (501)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------------------------
T ss_pred HHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc-ccccchhhhhhhhcccc
Confidence 999976 567999999999999999987 566 8999999999999988776542222 12344555566777776
Q ss_pred C-ceeEEEEEcCCCcccCCCCCceeeecC------------CCCCcc-eEEEe-----eccccCCCcEEEEEecchhhhh
Q 004948 323 G-LLNKVAMLFPYVFWETDLDTFGHLTDD------------SSSRGE-FFLFY-----SYATVAGGPLLIALVAGEAAHK 383 (722)
Q Consensus 323 ~-~~~kV~l~f~~~~w~~~~~~~g~l~~~------------~~~~~~-~~~~~-----~~~~p~g~~vl~~~v~g~~a~~ 383 (722)
+ +..++++.++.+........ -++.++ ...... +++.. +...|+|...+.+++..+.. .
T Consensus 303 ~~s~~~~~~~l~~~~~~l~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~-~ 380 (501)
T 4dgk_A 303 SNSLFVLYFGLNHHHDQLAHHT-VCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHL-G 380 (501)
T ss_dssp CCEEEEEEEEESSCCTTSCSEE-EEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCT-T
T ss_pred CCceeEEEecccCCccccccce-eccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCcc-c
Confidence 6 46777888876542111000 001000 000111 11111 12346777777766643211 1
Q ss_pred hcCC----CHHHHHHHHHHHHHhhcCCCCCCCCCCce-EEEe---cCCCC-CCCCcccCCCC--CCCCCccHHH-Hhccc
Q 004948 384 FESM----PPTDAVTKVLQILKGIYEPKGINVPEPIQ-TVCT---RWGGD-PFSLGSYSNVA--VGASGDDYDI-MAESV 451 (722)
Q Consensus 384 ~~~l----s~eel~~~vl~~L~~i~~~~~~~v~~p~~-~~~~---rW~~~-p~~~G~y~~~~--pG~~~~~~~~-l~~pv 451 (722)
+... ..+++.+.+++.|++.+.|. +.+-+. ..+. .|... ....|++.... +.+....++. ..+|+
T Consensus 381 ~~~~~~~~~~~~~~~~vl~~l~~~~~P~---~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i 457 (501)
T 4dgk_A 381 TANLDWTVEGPKLRDRIFAYLEQHYMPG---LRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTI 457 (501)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHTCTT---HHHHEEEEEEECTTTTC------------------------------CC
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhCCC---hHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCC
Confidence 1111 23567788888888766321 111111 1110 22221 11122211111 1122122332 24677
Q ss_pred CCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhhhh
Q 004948 452 GDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (722)
Q Consensus 452 ~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (722)
+||||||++|.++ ++++||+.||+.||++|++.+.+.+-
T Consensus 458 --~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 458 --TNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp --TTEEECCCH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred --CCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 8999999999764 68999999999999999999976553
No 19
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=9.1e-33 Score=306.54 Aligned_cols=399 Identities=14% Similarity=0.101 Sum_probs=248.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcC-CCCcHHHHHHHHhC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG-TLGNPLGILAKQLG 126 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~-~~~~~l~~L~~eLG 126 (722)
+||||||||++||+||++|+++|++|+|||+++++||++.++...|+ .+|.|++++.. ...+.+..+++++|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~-------~~d~G~~~~~~~~~~~~~~~l~~~lg 73 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGF-------QLSSGAFHMLPNGPGGPLACFLKEVE 73 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTE-------EEESSSCSCBTTGGGSHHHHHHHHTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCc-------EEcCCCceEecCCCccHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999988776 99999865542 33456788999999
Q ss_pred CCeeeecCCcceEecC-----------CcccChhhhHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHhccC
Q 004948 127 SLLHKVRDKCPLYRLD-----------GNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDS 195 (722)
Q Consensus 127 l~~~~~~~~~~~~~~~-----------G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~ 195 (722)
+............... +.....+....... +.........+.........+.++.+++... +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---~--- 146 (425)
T 3ka7_A 74 ASVNIVRSEMTTVRVPLKKGNPDYVKGFKDISFNDFPSLLS-YKDRMKIALLIVSTRKNRPSGSSLQAWIKSQ---V--- 146 (425)
T ss_dssp CCCCEEECCCCEEEEESSTTCCSSTTCEEEEEGGGGGGGSC-HHHHHHHHHHHHHTTTSCCCSSBHHHHHHHH---C---
T ss_pred CCceEEecCCceEEeecCCCcccccccccceehhhhhhhCC-HHHHHHHHHHHHhhhhcCCCCCCHHHHHHHh---c---
Confidence 8755433222111111 22222111000000 0000011111111111233566777766532 1
Q ss_pred CCHHHHHHHHHHHHhhhhccchhhHHHH-HHhhccCCCCCCCCCeeeeCCChHHHHHHHHH-----cCCcccCceEEEEE
Q 004948 196 GNAEAMNLFNWHLANLEYANASLLSKLS-LAFWDQDDPYDMGGDHCFLPGGNGRLVQALVE-----NVPILYEKTVHTIR 269 (722)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~-----~l~I~ln~~V~~I~ 269 (722)
..+....++..............++... ...+... ...+...++.+|++.++++|++ |++|++|++|++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~---~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~ 223 (425)
T 3ka7_A 147 SDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM---YRFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKIL 223 (425)
T ss_dssp CCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH---HHHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH---HhcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEE
Confidence 2333333333332221111111111100 0000000 0112457889999999999976 56899999999999
Q ss_pred ecCCcEE-EEECCEEEEeCEEEEcCChhhhhcCCcccCCCC--CHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCcee
Q 004948 270 YGSDGVQ-VLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPEL--PQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGH 346 (722)
Q Consensus 270 ~~~~~v~-V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~L--p~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~ 346 (722)
.++++|+ |+++|++++||.||+|+|+..+.+ .+.-.+.+ |+.+.+.++++.+++..+|++.|+++.|.. .+.
T Consensus 224 ~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~-ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~~ 298 (425)
T 3ka7_A 224 IENGKAAGIIADDRIHDADLVISNLGHAATAV-LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH----TGV 298 (425)
T ss_dssp EETTEEEEEEETTEEEECSEEEECSCHHHHHH-HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS----SSE
T ss_pred EECCEEEEEEECCEEEECCEEEECCCHHHHHH-hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc----CEE
Confidence 9988887 666889999999999999998876 22222333 788889999999999999999999987632 233
Q ss_pred eecCCCCCcceEEEe----eccccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecC
Q 004948 347 LTDDSSSRGEFFLFY----SYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRW 422 (722)
Q Consensus 347 l~~~~~~~~~~~~~~----~~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW 422 (722)
+............+. +...|+|..++.+++.... + ..+. +++.++.++++|++++|.. .+....+++|
T Consensus 299 ~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~-~~~~-~~~~~~~~~~~l~~~~p~~-----~~~~~~v~~~ 370 (425)
T 3ka7_A 299 LLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-E-NVKN-LESEIEMGLEDLKEIFPGK-----RYEVLLIQSY 370 (425)
T ss_dssp EECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-G-GGGG-HHHHHHHHHHHHHHHSTTC-----CEEEEEEEEE
T ss_pred EECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-c-cccc-hHHHHHHHHHHHHHhCCCC-----ceEEEEEEEE
Confidence 332221111111221 2335678888777665321 1 1112 3466799999999999741 3334467788
Q ss_pred CCCCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHH
Q 004948 423 GGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMA 486 (722)
Q Consensus 423 ~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il 486 (722)
.. ++..+.+|.. .++...+|+ +|||+||||+.+.+..+|++|+.||++||++|+
T Consensus 371 ~~------~~P~~~~~~~--~~~~~~~p~--~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 371 HD------EWPVNRAASG--TDPGNETPF--SGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp BT------TBCSBSSCTT--CCCCSBCSS--BTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred CC------CccccccccC--CCCCCCCCc--CCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 65 3333444432 223345666 799999999998666799999999999999986
No 20
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=3.9e-32 Score=308.65 Aligned_cols=408 Identities=14% Similarity=0.110 Sum_probs=248.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEecCCCcceeeeeeec-CCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRAGGRVYTKKM-EGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~GGr~~T~~~-~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
++||||||||+|||+||++|+++ |++|+|||+++++||+++|... +|+ .+|.|+|++...+ ..+..++++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~-------~~D~G~h~~~~~~-~~v~~l~~e 81 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGF-------LYDVGGHVIFSHY-KYFDDCLDE 81 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSC-------EEESSCCCCCCCB-HHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCE-------EEEeCceEecCCC-HHHHHHHHH
Confidence 48999999999999999999985 9999999999999999999654 454 9999999997665 346678888
Q ss_pred hCCCeeee--cCCcceEecCCcccChhhhHHH-----HHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHhccCCC
Q 004948 125 LGSLLHKV--RDKCPLYRLDGNSVDPEIDMKV-----EADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGN 197 (722)
Q Consensus 125 LGl~~~~~--~~~~~~~~~~G~~~~~~~~~~~-----~~~~~~ll~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~ 197 (722)
++.....+ ......++.+|+.++.+..... .........................++.+++.... +..+
T Consensus 82 ~~~~~~~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~---g~~l- 157 (513)
T 4gde_A 82 ALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMM---GTGI- 157 (513)
T ss_dssp HSCSGGGEEEEECCEEEEETTEEEESSGGGGGGGSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHHHHHH---HHHH-
T ss_pred hCCccceeEEecCceEEEECCeEeecchhhhhhhcchhhHHHHHHHHHHHHHhhhcccccccCHHHHHHHhh---hhhh-
Confidence 87643222 2334455667776654432110 01111111111111111222345667777664311 1100
Q ss_pred HHHHHHHHHHHHhhhhccchh---------------hHHHHHHhhc-cCCCCCCCCC-eeeeCCChHHHHHHHHHcC---
Q 004948 198 AEAMNLFNWHLANLEYANASL---------------LSKLSLAFWD-QDDPYDMGGD-HCFLPGGNGRLVQALVENV--- 257 (722)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~---------------l~~l~~~~~~-~~~~~~~~g~-~~~~~gG~~~L~~aLa~~l--- 257 (722)
...++.++........... .......... .......... .+.++||++.|+++|++.+
T Consensus 158 --~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~ 235 (513)
T 4gde_A 158 --ADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKE 235 (513)
T ss_dssp --HHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGG
T ss_pred --hhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHhc
Confidence 0111222211111111100 0011111111 1111111112 3345799999999998866
Q ss_pred --CcccCceEEEEEecCCcEEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCC
Q 004948 258 --PILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYV 335 (722)
Q Consensus 258 --~I~ln~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~ 335 (722)
+|++|++|++|..++++++ ..+|+++.||+||+|+|+..+.+ ..+ ++....+...++|.++..|++.++..
T Consensus 236 g~~i~~~~~V~~I~~~~~~v~-~~~G~~~~ad~vI~t~P~~~l~~----~l~--~~~~~~~~~~l~y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 236 KTRFGEKGKVTKVNANNKTVT-LQDGTTIGYKKLVSTMAVDFLAE----AMN--DQELVGLTKQLFYSSTHVIGVGVRGS 308 (513)
T ss_dssp GEEESGGGCEEEEETTTTEEE-ETTSCEEEEEEEEECSCHHHHHH----HTT--CHHHHHHHTTCCEEEEEEEEEEEESS
T ss_pred CeeeecceEEEEEEccCCEEE-EcCCCEEECCEEEECCCHHHHHH----hcC--chhhHhhhhcccCCceEEEEEEEecc
Confidence 4999999999998776543 22899999999999999999976 333 35566788899999999999988765
Q ss_pred cccCCCCCceeeecCCCC--------------------Ccce-EEEeec----cccCCCcEEEEEecchhhhhhcCCCHH
Q 004948 336 FWETDLDTFGHLTDDSSS--------------------RGEF-FLFYSY----ATVAGGPLLIALVAGEAAHKFESMPPT 390 (722)
Q Consensus 336 ~w~~~~~~~g~l~~~~~~--------------------~~~~-~~~~~~----~~p~g~~vl~~~v~g~~a~~~~~ls~e 390 (722)
.+....+..+....++.. .... ..+.+. ..+.+...+.+++.+.....+..++++
T Consensus 309 ~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de 388 (513)
T 4gde_A 309 RPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQE 388 (513)
T ss_dssp CCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTT
T ss_pred ccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHH
Confidence 433222222221111110 0000 111111 122333455666655555667789999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCC---ccHHHHhcccCCCcEEEccccccccc
Q 004948 391 DAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASG---DDYDIMAESVGDGRLFFAGEATIRRY 467 (722)
Q Consensus 391 el~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~---~~~~~l~~pv~~~~L~fAGd~ts~~~ 467 (722)
++++.++++|.++.+.. ..+.++...+.||.. +|..+.+|... ..++.+.. .|||+||....+.|
T Consensus 389 ~l~~~~~~~L~~~~~i~--~~~~i~~~~v~r~~~------ayP~y~~~~~~~~~~~~~~l~~----~~l~~~GR~g~~~Y 456 (513)
T 4gde_A 389 TILADCIQGLVNTEMLK--PTDEIVSTYHRRFDH------GYPTPTLEREGTLTQILPKLQD----KDIWSRGRFGSWRY 456 (513)
T ss_dssp THHHHHHHHHHHTTSSC--TTCEEEEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH----TTEEECSTTTTCCG
T ss_pred HHHHHHHHHHHHhcCCC--CccceEEEEEEECCC------eecccCHhHHHHHHHHHHHHhh----cCcEEecCCcccCc
Confidence 99999999999998643 123456778888955 45544445421 12333433 58999998777666
Q ss_pred C-ccchHHHHHHHHHHHHHHH
Q 004948 468 P-ATMHGAFLSGLRETAKMAH 487 (722)
Q Consensus 468 ~-g~~eGAi~SG~~AA~~Il~ 487 (722)
. ++|++|+.+|++||++|+.
T Consensus 457 ~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 457 EVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp GGCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHc
Confidence 5 6899999999999999996
No 21
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=287.03 Aligned_cols=327 Identities=18% Similarity=0.238 Sum_probs=229.1
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 48 LRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
+||+|||||++||+||+.|++ .|++|+|||+++.+||++.+...... ....+|.|+.++...... ..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~----~~~~~d~g~~~~~~~~~~-~~----- 71 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHN----PQCTADLGAQYITCTPHY-AK----- 71 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSC----TTCEEESSCCCEEECSSH-HH-----
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCC----CCceEecCCceEEcCchH-HH-----
Confidence 689999999999999999999 99999999999999999998876432 124788888766432110 00
Q ss_pred hCCCeeeecCCcceEecCCcccChhhhHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHhccCCCHHHHHHH
Q 004948 125 LGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMNLF 204 (722)
Q Consensus 125 LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~ 204 (722)
.+..++. .+... . ....
T Consensus 72 --------------------------------~~~~~~~---~~~~~-g-~~~~-------------------------- 88 (342)
T 3qj4_A 72 --------------------------------KHQRFYD---ELLAY-G-VLRP-------------------------- 88 (342)
T ss_dssp --------------------------------HTHHHHH---HHHHT-T-SCEE--------------------------
T ss_pred --------------------------------HHHHHHH---HHHhC-C-Ceec--------------------------
Confidence 0000000 00000 0 0000
Q ss_pred HHHHHhhhhccchhhHHHHHHhhccCCCCCCCCCeeeeCCChHHHHHHHHH--cCCcccCceEEEEEecCCcEEEEE-CC
Q 004948 205 NWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVE--NVPILYEKTVHTIRYGSDGVQVLA-GS 281 (722)
Q Consensus 205 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~--~l~I~ln~~V~~I~~~~~~v~V~~-~G 281 (722)
.. ... .... .......+...+|++.++++|++ +++|+++++|++|..++++|+|++ +|
T Consensus 89 --------~~--~~~--------~~~~-~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g 149 (342)
T 3qj4_A 89 --------LS--SPI--------EGMV-MKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTG 149 (342)
T ss_dssp --------CC--SCE--------ETCC-C--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSS
T ss_pred --------Cc--hhh--------ccee-ccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCC
Confidence 00 000 0000 00112356778999999999988 889999999999999999999988 77
Q ss_pred EEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEe
Q 004948 282 QVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFY 361 (722)
Q Consensus 282 ~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~ 361 (722)
++++||.||+|+|++.+.++.-.+.|.||+...+.+++++|.+..+|++.|++++|.+. ...|.+..+.. ...++++
T Consensus 150 ~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~~--~~~~~~~ 226 (342)
T 3qj4_A 150 SPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDV-PWAGQYITSNP--CIRFVSI 226 (342)
T ss_dssp CCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CC-SCSEEECSSCS--SEEEEEE
T ss_pred CEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCCccCC-ceeeEEccCCc--ceEEEEc
Confidence 77899999999999998863323445688888999999999999999999999888643 34566654321 1233344
Q ss_pred ecccc-----CCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCC-C
Q 004948 362 SYATV-----AGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSN-V 435 (722)
Q Consensus 362 ~~~~p-----~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~-~ 435 (722)
+...+ ++...+++++.+..+..+.+++++++++.++++|.+++|. .+.|..+.++||.... ..|.. .
T Consensus 227 ~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~----~~~p~~~~v~rW~~a~---p~~~~~~ 299 (342)
T 3qj4_A 227 DNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPG----LPQPIATKCQKWRHSQ---VTNAAAN 299 (342)
T ss_dssp HHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCS----CCCCSEEEEEEETTCS---BSSCCSS
T ss_pred cccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccC----CCCCceeeeccccccc---cccccCC
Confidence 44333 2345788888888888888999999999999999999973 4688999999996431 11211 0
Q ss_pred CCCCCCccHHHHh-cccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHH
Q 004948 436 AVGASGDDYDIMA-ESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHC 488 (722)
Q Consensus 436 ~pG~~~~~~~~l~-~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~ 488 (722)
.++. +. .+. ++|++||||+.. ++||+|+.||.+||++|+++
T Consensus 300 ~~~~-------~~~~~~--~~l~laGd~~~g---~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 300 CPGQ-------MTLHHK--PFLACGGDGFTQ---SNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp SCSC-------EEEETT--TEEEECSGGGSC---SSHHHHHHHHHHHHHHHTTC
T ss_pred Ccce-------eEecCC--ccEEEEccccCC---CCccHHHHHHHHHHHHHHhh
Confidence 1221 11 233 799999999964 69999999999999999764
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.97 E-value=1.2e-29 Score=281.62 Aligned_cols=387 Identities=17% Similarity=0.127 Sum_probs=233.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEc-CCCCcHHHHHHHHhC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLT-GTLGNPLGILAKQLG 126 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~-~~~~~~l~~L~~eLG 126 (722)
+||+|||||++||+||++|+++|++|+|||+++++||++.+....|+ .+|.|++++. ......+..+++++|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~-------~~d~G~~~~~~~~~~~~~~~l~~~lg 73 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGF-------QLSTGALHMIPHGEDGPLAHLLRILG 73 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTE-------EEESSSCSEETTTTSSHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCE-------EEecCCeEEEccCCChHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999998776 9999986654 333457888999999
Q ss_pred CCeeeec-CCcceEecCCcccChhhhHHHH--HHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHhccCCCHHHHHH
Q 004948 127 SLLHKVR-DKCPLYRLDGNSVDPEIDMKVE--ADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMNL 203 (722)
Q Consensus 127 l~~~~~~-~~~~~~~~~G~~~~~~~~~~~~--~~~~~ll~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~ 203 (722)
+...... .....+..+|.....+...... .....+.......... .....+.++.+++.... ...+....+
T Consensus 74 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~~g-----~~~~~~~~~ 147 (421)
T 3nrn_A 74 AKVEIVNSNPKGKILWEGKIFHYRESWKFLSVKEKAKALKLLAEIRMN-KLPKEEIPADEWIKEKI-----GENEFLLSV 147 (421)
T ss_dssp CCCCEEECSSSCEEEETTEEEEGGGGGGGCC--------CCHHHHHTT-CCCCCCSBHHHHHHHHT-----CCCHHHHHH
T ss_pred CcceEEECCCCeEEEECCEEEEcCCchhhCCHhHHHHHHHHHHHHHhc-cCCCCCCCHHHHHHHhc-----CCcHHHHHH
Confidence 8654332 1222333466654433211100 0000000000000000 01122356666554320 122333333
Q ss_pred HHHHHHhhhhccchhhHH--HHHHhhccCCCCCCCCCeeeeCCChHHHHHHHHH-----cCCcccCceEEEEEecCCcEE
Q 004948 204 FNWHLANLEYANASLLSK--LSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVE-----NVPILYEKTVHTIRYGSDGVQ 276 (722)
Q Consensus 204 ~~~~~~~~~~~~~~~l~~--l~~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~-----~l~I~ln~~V~~I~~~~~~v~ 276 (722)
+..............+.. +...+... ...+..+++.+|++.++++|++ |++|++|++|++|..++++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v- 222 (421)
T 3nrn_A 148 LESFAGWADSVSLSDLTALELAKEIRAA----LRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV- 222 (421)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-
T ss_pred HHHHHHHhcCCCcccCCHHHHHHHHHHH----hhcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-
Confidence 333322211111111110 00000000 0012457899999999999976 56899999999999988888
Q ss_pred EEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeee-cCCCCCc
Q 004948 277 VLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLT-DDSSSRG 355 (722)
Q Consensus 277 V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~-~~~~~~~ 355 (722)
|+++|++++||.||+|+|+..+.+ .+. .+.+|+...+.++++.+.+..+|++.++++.+. ..+.+. ++.. .
T Consensus 223 V~~~g~~~~ad~Vv~a~~~~~~~~-ll~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~----~~~~~~~~~~~--~ 294 (421)
T 3nrn_A 223 YTRDNEEYSFDVAISNVGVRETVK-LIG-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRI----GNTIVFTPGLM--I 294 (421)
T ss_dssp EETTCCEEECSEEEECSCHHHHHH-HHC-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSS----CSSEEECTTSS--S
T ss_pred EEeCCcEEEeCEEEECCCHHHHHH-hcC-cccCCHHHHHHHhCCCCCceEEEEEEEcCCccc----CCeEEEcCCcc--e
Confidence 755888999999999999998875 111 135788888899999999999999999887432 122222 2221 1
Q ss_pred ceEEEe----eccccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcc
Q 004948 356 EFFLFY----SYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGS 431 (722)
Q Consensus 356 ~~~~~~----~~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~ 431 (722)
....+. +...|+|..++.++.... ..++++.++.++++|++++| . .++ ..+.+|... ...
T Consensus 295 ~~i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p-~----~~~--~~~~~~~~~---~p~ 358 (421)
T 3nrn_A 295 NGFNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP-E----GEP--LLAQVYRDG---NPV 358 (421)
T ss_dssp CEEECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT-T----CEE--EEEEEC---------
T ss_pred eeEeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC-C----CeE--EEeeeccCC---CCc
Confidence 111211 223466776666655322 23345669999999999997 1 122 355678542 011
Q ss_pred cCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHH
Q 004948 432 YSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKM 485 (722)
Q Consensus 432 y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~I 485 (722)
| ...+|.. . + .+ . +|||+|||++.+.+.-+||||+.||.+||++|
T Consensus 359 ~-~~~~~~~--~-~--~~--~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 359 N-RTRAGLH--I-E--WP--L-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp --------C--C-C--CC--C-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred c-cccCCCC--C-C--CC--C-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 1 1122221 1 1 22 2 79999999998642225699999999999998
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.96 E-value=2.8e-28 Score=275.64 Aligned_cols=409 Identities=14% Similarity=0.111 Sum_probs=253.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEecCCCcceeeeee-ecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGGRVYTK-KMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GGr~~T~-~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
++||+|||||++||+||++|+++| .+|+|||+++++||+++|. ..+|. .+|.|++++...+ ..+..++++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~-------~~~~g~~~~~~~~-~~~~~l~~~ 80 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGF-------TWDLGGHVIFSHY-QYFDDVMDW 80 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSC-------EEESSCCCBCCSB-HHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCc-------EEeeCCcccccCh-HHHHHHHHH
Confidence 489999999999999999999999 7999999999999999996 44554 9999999987643 446668888
Q ss_pred hCCCeeeecCCcceEecCCcccChhhhH-------H-HHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHH-HHHhccC
Q 004948 125 LGSLLHKVRDKCPLYRLDGNSVDPEIDM-------K-VEADFNRLLDKASRLRQLMGEVAMDVSLGSALETF-WRVYWDS 195 (722)
Q Consensus 125 LGl~~~~~~~~~~~~~~~G~~~~~~~~~-------~-~~~~~~~ll~~~~~~~~~~~~~~~~~s~~~~l~~~-~~~~~~~ 195 (722)
+...... .....+++.+|+.++.+... . ....+..++.. .......++.++++++... .....+.
T Consensus 81 ~~~~~~~-~~~~~~~~~~g~~~~~P~~~~~~~l~~~~~~~~~~~ll~~-----~~~~~~~~~~s~~e~~~~~~g~~~~~~ 154 (484)
T 4dsg_A 81 AVQGWNV-LQRESWVWVRGRWVPYPFQNNIHRLPEQDRKRCLDELVRS-----HARTYTEPPNNFEESFTRQFGEGIADI 154 (484)
T ss_dssp HCSCEEE-EECCCEEEETTEEEESSGGGCGGGSCHHHHHHHHHHHHHH-----HHCCCSSCCSSHHHHHHHHHHHHHCCC
T ss_pred Hhhhhhh-ccCceEEEECCEEEEeCccchhhhCCHHHHHHHHHHHHHH-----HhccCCCCCCCHHHHHHHHhHHHHHHH
Confidence 7533222 22334455677765544211 0 00111111111 1111224677888887542 2211111
Q ss_pred C-CHHHHHHHHHHHHhhhhc------cchhhHHHHHHhhccCCC--CCCCCCeeee-CCChHHHHHHHHHcC---CcccC
Q 004948 196 G-NAEAMNLFNWHLANLEYA------NASLLSKLSLAFWDQDDP--YDMGGDHCFL-PGGNGRLVQALVENV---PILYE 262 (722)
Q Consensus 196 ~-~~~~~~~~~~~~~~~~~~------~~~~l~~l~~~~~~~~~~--~~~~g~~~~~-~gG~~~L~~aLa~~l---~I~ln 262 (722)
. .+.....+......+... ....+..+....+..... ....+.+.++ .||+++|+++|++.+ +|+++
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~ 234 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFN 234 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCGGGEEEC
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhhCeEEEC
Confidence 1 111111110000000000 000011111111211111 1111223333 599999999999988 69999
Q ss_pred --ceEEEEEecCCcEEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCC
Q 004948 263 --KTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETD 340 (722)
Q Consensus 263 --~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~ 340 (722)
++|++|..++++|++ .+|+++.||+||+|+|+..+.+......+++|+...+.++.++|.++.+|.+.|+.+....-
T Consensus 235 ~~~~V~~I~~~~~~v~~-~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~ 313 (484)
T 4dsg_A 235 SGFQAIAIDADAKTITF-SNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHL 313 (484)
T ss_dssp GGGCEEEEETTTTEEEE-TTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGG
T ss_pred CCceeEEEEecCCEEEE-CCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccC
Confidence 569999988876643 37889999999999999998762111124578888899999999999999999988642221
Q ss_pred CCCceeeecCCCCCcceEEEee----ccccCCCcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCc-
Q 004948 341 LDTFGHLTDDSSSRGEFFLFYS----YATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPI- 415 (722)
Q Consensus 341 ~~~~g~l~~~~~~~~~~~~~~~----~~~p~g~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~- 415 (722)
...++.+.++......-..+++ ...|++..+++..+... ....++++++++.++++|.++.+.. ..+++
T Consensus 314 ~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~~~~---~~~~~~ 387 (484)
T 4dsg_A 314 KTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASNLLL---PEDLLV 387 (484)
T ss_dssp TTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTTSCC---TTCCEE
T ss_pred CCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcCCCC---ccceEE
Confidence 3456666655432212222222 23456666666666433 3456799999999999999986421 12333
Q ss_pred eEEEecCCCCCCCCcccCCCCCCCCC---ccHHHHhcccCCCcEEEcccccccccC-ccchHHHHHHHHHHHHHH
Q 004948 416 QTVCTRWGGDPFSLGSYSNVAVGASG---DDYDIMAESVGDGRLFFAGEATIRRYP-ATMHGAFLSGLRETAKMA 486 (722)
Q Consensus 416 ~~~~~rW~~~p~~~G~y~~~~pG~~~---~~~~~l~~pv~~~~L~fAGd~ts~~~~-g~~eGAi~SG~~AA~~Il 486 (722)
...+.+|.. +|..+.+|... ..++.+.+ .||+++|.+..+.|. ..|+.|+.||++||++|+
T Consensus 388 ~~~v~r~~~------~yP~y~~~~~~~~~~~~~~l~~----~~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 388 SKWHYRIEK------GYPTPFIGRNNLLEKAQPELMS----RCIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH----TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCc------cccCCCccHHHHHHHHHHHHHh----CCcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 346778854 66666666432 12223332 289999998776543 479999999999999997
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.96 E-value=4.9e-29 Score=276.66 Aligned_cols=396 Identities=16% Similarity=0.187 Sum_probs=225.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHh
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQL 125 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eL 125 (722)
++||+|||||++||+||++|+++| ++|+|||+++++||+++|.+..|. .+|.|++++...+ ..+..+++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~-------~~d~G~~~~~~~~-~~~~~l~~~~ 77 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGR-------RYEMGAIMGVPSY-DTIQEIMDRT 77 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTE-------ECCSSCCCBCTTC-HHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCc-------ccccCceeecCCc-HHHHHHHHHh
Confidence 489999999999999999999999 899999999999999999988765 8999999986554 4577899999
Q ss_pred CCCeeeecCCcceEecCCcccChhhhHHHHHHHHHHHHHHHHHH-HHhhcc-----------ccCCCHHHHHHHHHHHhc
Q 004948 126 GSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLR-QLMGEV-----------AMDVSLGSALETFWRVYW 193 (722)
Q Consensus 126 Gl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~-----------~~~~s~~~~l~~~~~~~~ 193 (722)
|++.........++..+|....+..+......+...+.....+. ...... ....++.++++.. .
T Consensus 78 g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~----~ 153 (424)
T 2b9w_A 78 GDKVDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALN----G 153 (424)
T ss_dssp CCCCCSCCCCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHT----T
T ss_pred CCccccccccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhh----C
Confidence 98765433333455666765432211100000111111111111 100000 1234555555321 0
Q ss_pred cCCCHHHHHHH-HHHHHhhhhccchhhHHHHH-HhhccCCC-CCCCCCeeeeCCChHHHHHHHHHcC--CcccCceEEEE
Q 004948 194 DSGNAEAMNLF-NWHLANLEYANASLLSKLSL-AFWDQDDP-YDMGGDHCFLPGGNGRLVQALVENV--PILYEKTVHTI 268 (722)
Q Consensus 194 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~-~~~~~~~~-~~~~g~~~~~~gG~~~L~~aLa~~l--~I~ln~~V~~I 268 (722)
.. .....+ .+... ..+........+.. .++..... ....+..+.+.+|+++++++|.+.+ +|++|++|++|
T Consensus 154 --~~-~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i 229 (424)
T 2b9w_A 154 --CE-AARDLWINPFTA-FGYGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRI 229 (424)
T ss_dssp --CG-GGHHHHTTTTCC-CCCCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEE
T ss_pred --cH-HHHHHHHHHHHh-hccCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHHHHHHHhhcceEEcCCEEEEE
Confidence 11 111111 00000 00011111111100 01000000 0011234578899999999999876 59999999999
Q ss_pred EecCCcEEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeee
Q 004948 269 RYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLT 348 (722)
Q Consensus 269 ~~~~~~v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~ 348 (722)
..++++|+|++++.+++||+||+|+|+..+.+ +.|++|+.. +.+.++.+.++... +.+...++. ..+++.
T Consensus 230 ~~~~~~v~v~~~~g~~~ad~Vv~a~~~~~~~~----~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~ 299 (424)
T 2b9w_A 230 TREDGKVHIHTTDWDRESDVLVLTVPLEKFLD----YSDADDDER-EYFSKIIHQQYMVD-ACLVKEYPT----ISGYVP 299 (424)
T ss_dssp ECCTTCEEEEESSCEEEESEEEECSCHHHHTT----SBCCCHHHH-HHHTTCEEEEEEEE-EEEESSCCS----SEEECG
T ss_pred EEECCEEEEEECCCeEEcCEEEECCCHHHHhh----ccCCCHHHH-HHHhcCCcceeEEE-EEEeccCCc----cccccc
Confidence 99888899888434599999999999998754 456555543 45677776653322 222222211 112222
Q ss_pred cCCC--CCcceEEEeeccccCC-CcEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCC
Q 004948 349 DDSS--SRGEFFLFYSYATVAG-GPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGD 425 (722)
Q Consensus 349 ~~~~--~~~~~~~~~~~~~p~g-~~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~ 425 (722)
.+.. ..+.... .....+++ ..++++|+.+. ...+...+++++++.++++|.+ +++. .+.+ ....+|...
T Consensus 300 ~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~v~~~l~~-l~~~---~~~~--~~~~~w~~~ 371 (424)
T 2b9w_A 300 DNMRPERLGHVMV-YYHRWADDPHQIITTYLLRN-HPDYADKTQEECRQMVLDDMET-FGHP---VEKI--IEEQTWYYF 371 (424)
T ss_dssp GGGSGGGTTSCCE-EEECCTTCTTSCEEEEEECC-BTTBCCCCHHHHHHHHHHHHHH-TTCC---EEEE--EEEEEEEEE
T ss_pred CCCCCcCCCcceE-EeeecCCCCceEEEEEeccC-CCcccccChHHHHHHHHHHHHH-cCCc---cccc--ccccceeee
Confidence 1110 1111111 22222222 45777887654 3556678899999999999998 5431 1111 223456321
Q ss_pred CC-CCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHH
Q 004948 426 PF-SLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMA 486 (722)
Q Consensus 426 p~-~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il 486 (722)
|. ....| ..| .+..+....+.++|||||+|+. .|++|+|+.||++||++|+
T Consensus 372 p~~~~~~~---~~G----~~~~~~~~~~~~~l~~aG~~~~---~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 372 PHVSSEDY---KAG----WYEKVEGMQGRRNTFYAGEIMS---FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EECCHHHH---HTT----HHHHHHHTTTGGGEEECSGGGS---CSSHHHHHHHHHHHHHHHT
T ss_pred eccCHHHH---hcc----HHHHHHHHhCCCCceEeccccc---cccHHHHHHHHHHHHHHhc
Confidence 11 00001 111 1222332222279999999986 4799999999999999885
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.95 E-value=1.5e-25 Score=240.15 Aligned_cols=321 Identities=16% Similarity=0.233 Sum_probs=220.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcCCCCcHHHHHHHHhC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
++||+|||||++||++|+.|+++|++|+|||+++.+||++.+....+. .+|.|..++.... ..+..+++++.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~ 73 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAG-------ALDMGAQYFTARD-RRFATAVKQWQ 73 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTE-------EEECSCCCBCCCS-HHHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCC-------eEecCCCeEecCC-HHHHHHHHHHH
Confidence 379999999999999999999999999999999999999998877654 8888888775432 11222222211
Q ss_pred CCeeeecCCcceEecCCcccChhhhHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHhccCCCHHHHHHHHH
Q 004948 127 SLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMNLFNW 206 (722)
Q Consensus 127 l~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~ 206 (722)
.... .......
T Consensus 74 ~~~~-----------------------------------------~~~~~~~---------------------------- 84 (336)
T 1yvv_A 74 AQGH-----------------------------------------VAEWTPL---------------------------- 84 (336)
T ss_dssp HHTS-----------------------------------------EEEECCC----------------------------
T ss_pred hCCC-----------------------------------------eeecccc----------------------------
Confidence 0000 0000000
Q ss_pred HHHhhhhccchhhHHHHHHhhccCCCCCCCCCeeeeCCChHHHHHHHHHcCCcccCceEEEEEecCCcEEEEE-CCEEEE
Q 004948 207 HLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLA-GSQVFE 285 (722)
Q Consensus 207 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~ 285 (722)
....... ...........+....|+..+.++|+++++|+++++|++|..++++|+|++ +|+.+.
T Consensus 85 ----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~ 149 (336)
T 1yvv_A 85 ----LYNFHAG-----------RLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHG 149 (336)
T ss_dssp ----EEEESSS-----------BCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEE
T ss_pred ----ceeccCc-----------ccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCcc
Confidence 0000000 000001112345667899999999999999999999999999999999988 676664
Q ss_pred -eCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEEeecc
Q 004948 286 -GDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYA 364 (722)
Q Consensus 286 -AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~~~~~ 364 (722)
||.||+|+|...+.+ +.+.. +.....+..+.|.+..++++.|+.++|... . +....+ +...+++...
T Consensus 150 ~a~~vV~a~g~~~~~~----~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~----~~~~~l~~~~ 217 (336)
T 1yvv_A 150 PFSHVIIATPAPQAST----LLAAA-PKLASVVAGVKMDPTWAVALAFETPLQTPM-Q--GCFVQD----SPLDWLARNR 217 (336)
T ss_dssp EESEEEECSCHHHHGG----GGTTC-HHHHHHHTTCCEEEEEEEEEEESSCCSCCC-C--EEEECS----SSEEEEEEGG
T ss_pred ccCEEEEcCCHHHHHH----hhccC-HHHHHHHhhcCccceeEEEEEecCCCCCCC-C--eEEeCC----CceeEEEecC
Confidence 999999999998876 22322 345678899999999999999999987532 2 222221 2233333332
Q ss_pred -ccCCC---cEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCC
Q 004948 365 -TVAGG---PLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGAS 440 (722)
Q Consensus 365 -~p~g~---~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~ 440 (722)
.|... ..++.+..++.+..+..++++++.+.+++.+.+++|. ..+.|.....++|... ...|. .+..
T Consensus 218 ~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~---~~~~p~~~~~~rw~~a---~~~~~---~~~~ 288 (336)
T 1yvv_A 218 SKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDC---TMPAPVFSLAHRWLYA---RPAGA---HEWG 288 (336)
T ss_dssp GSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSS---CCCCCSEEEEEEEEEE---EESSC---CCCS
T ss_pred cCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCC---CCCCCcEEEccccCcc---CCCCC---CCCC
Confidence 23211 3466666667777888899999999999999999974 3556777788999531 11111 1111
Q ss_pred CccHHHHhcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHh
Q 004948 441 GDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCAN 490 (722)
Q Consensus 441 ~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~ 490 (722)
.+..+. +||+||||+++. ++|++|+.||.++|+.|++.+.
T Consensus 289 -----~~~~~~--~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 289 -----ALSDAD--LGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp -----CEEETT--TTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTT
T ss_pred -----eeecCC--CCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhh
Confidence 111232 899999999974 5999999999999999998764
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.88 E-value=2.4e-23 Score=229.57 Aligned_cols=251 Identities=16% Similarity=0.186 Sum_probs=149.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEecCCCcceeeeeeec--CCCCCCCcceEe-eccceEEcCCCCcHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRAGGRVYTKKM--EGGAGNRISASA-DLGGSVLTGTLGNPLGILA 122 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~GGr~~T~~~--~g~~gn~~~~~~-D~Ga~~~~~~~~~~l~~L~ 122 (722)
++||+|||||++||+||++|+++ |++|+|||+++++||+++|... .|. .+ |.|++++...+ ..+..++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~-------~~~~~G~~~~~~~~-~~~~~~~ 78 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGI-------EVHKYGAHLFHTSN-KRVWDYV 78 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCC-------EEETTSCCCEEESC-HHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCE-------EEEeCCCcEEcCCc-HHHHHHH
Confidence 58999999999999999999999 9999999999999999999987 343 66 59999988654 4567789
Q ss_pred HHhCCCeeeecCCcceEecCCcccChhhhHH-HHHHHHHH--HHHHH-HHHHHhhcc--ccCCCHHHHHHHHHHHhccCC
Q 004948 123 KQLGSLLHKVRDKCPLYRLDGNSVDPEIDMK-VEADFNRL--LDKAS-RLRQLMGEV--AMDVSLGSALETFWRVYWDSG 196 (722)
Q Consensus 123 ~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~l--l~~~~-~~~~~~~~~--~~~~s~~~~l~~~~~~~~~~~ 196 (722)
+++|+. ... .....+..+|..+..+.... ....+... ..... .+....... .++.++.+++.. .++.
T Consensus 79 ~~~g~~-~~~-~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~---~~g~-- 151 (399)
T 1v0j_A 79 RQFTDF-TDY-RHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAIS---LIGR-- 151 (399)
T ss_dssp TTTCCB-CCC-CCCEEEEETTEEEEESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGSCTTC----CCHHHH---HHCH--
T ss_pred HHhhhh-hcc-ccceEEEECCEEEeCCCCHHHHHHHhcccCCHHHHHHHHHHHhhccCCCCcccHHHHHHH---HHhH--
Confidence 999872 222 23345567787665544321 11111100 11111 112222211 234556565543 1111
Q ss_pred CHHHHHHHHHHHHhhhhccchhhHHHHHHhhccCCCCC---CCCCe-eeeCCChHHHHHHHHHc--CCcccCceEEEEEe
Q 004948 197 NAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYD---MGGDH-CFLPGGNGRLVQALVEN--VPILYEKTVHTIRY 270 (722)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~---~~g~~-~~~~gG~~~L~~aLa~~--l~I~ln~~V~~I~~ 270 (722)
.....++.++...........++......+....... ....+ .+++||+++|+++|++. .+|++|++|++|..
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~ 230 (399)
T 1v0j_A 152 -PLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRG 230 (399)
T ss_dssp -HHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCSTTEEEECSCCHHHHHH
T ss_pred -HHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcCCeEEEECCchhhhhh
Confidence 1122233333322222222222211110000000000 11123 28899999999999874 46999999999864
Q ss_pred cCCcEEEEECCEEE-EeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCc
Q 004948 271 GSDGVQVLAGSQVF-EGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVF 336 (722)
Q Consensus 271 ~~~~v~V~~~G~~~-~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~ 336 (722)
. | + ++ +||+||+|+|+..+.+ + .+.+++|.++..+.+.++.+.
T Consensus 231 ~---v----~--~~~~aD~VI~t~p~~~l~~--~------------~l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 231 Q---L----R--PGSPAAPVVYTGPLDRYFD--Y------------AEGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp H---H----T--TTSTTCCEEECSCHHHHTT--T------------TTCCCCEEEEEEEEEEESSSC
T ss_pred h---h----h--hcccCCEEEECCcHHHHHh--h------------hhCCCCcceEEEEEEEEcccc
Confidence 3 2 1 34 6999999999998864 1 234678888888888887653
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.84 E-value=2.2e-20 Score=203.57 Aligned_cols=250 Identities=15% Similarity=0.156 Sum_probs=153.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEee-ccceEEcCCCCcHHHHHHHHhC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASAD-LGGSVLTGTLGNPLGILAKQLG 126 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D-~Ga~~~~~~~~~~l~~L~~eLG 126 (722)
+||+|||||++||+||++|+++|++|+|+|+++++||++.|....|. .+| .|++++...+ ..+..++++++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~-------~~~~~G~~~~~~~~-~~~~~~~~~l~ 73 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGI-------QIHKYGAHIFHTND-KYIWDYVNDLV 73 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTE-------EEETTSCCCEEESC-HHHHHHHHTTS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCc-------eeeccCCceecCCC-HHHHHHHHHhh
Confidence 79999999999999999999999999999999999999999887654 775 9999988754 34666888888
Q ss_pred CCeeeecCCcceEecCCcccChhhhHH-HHHHHHH-HHHHHHHH-HHHhhc--cccCCCHHHHHHHHHHHhccCCCHHHH
Q 004948 127 SLLHKVRDKCPLYRLDGNSVDPEIDMK-VEADFNR-LLDKASRL-RQLMGE--VAMDVSLGSALETFWRVYWDSGNAEAM 201 (722)
Q Consensus 127 l~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~-ll~~~~~~-~~~~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~ 201 (722)
.... . ........+|..++.+.+.. +...+.. .......+ ...... ...+.++++++... ++. ....
T Consensus 74 ~~~~-~-~~~~~~~~~g~~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~---~g~---~~~~ 145 (367)
T 1i8t_A 74 EFNR-F-TNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISL---VGE---DLYQ 145 (367)
T ss_dssp CBCC-C-CCCCEEEETTEEEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTTTCCCCCCSHHHHHHHH---HHH---HHHH
T ss_pred hhhh-c-cccceEEECCeEEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhccCCCCCccHHHHHHHH---HhH---HHHH
Confidence 6321 1 22334556777665543321 1111100 01111111 111111 13567788776532 111 1111
Q ss_pred HHHHHHHHhhhhccchhhHHHHHHhhccC---CCCCCCCCe-eeeCCChHHHHHHHHHcCCcccCceEEEEEecCCcEEE
Q 004948 202 NLFNWHLANLEYANASLLSKLSLAFWDQD---DPYDMGGDH-CFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQV 277 (722)
Q Consensus 202 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~---~~~~~~g~~-~~~~gG~~~L~~aLa~~l~I~ln~~V~~I~~~~~~v~V 277 (722)
.++.++...........++.......... +.....+.+ .+++||+++|+++|+++++|++|++|++|.. .|
T Consensus 146 ~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g~~i~l~~~V~~i~~---~v-- 220 (367)
T 1i8t_A 146 ALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKD---SL-- 220 (367)
T ss_dssp HHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTTSEEECSCCGGGSHH---HH--
T ss_pred HHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcCCEEEeCCceeeech---hh--
Confidence 23333333222222222221111000000 000112234 3889999999999999999999999998863 12
Q ss_pred EECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcc
Q 004948 278 LAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFW 337 (722)
Q Consensus 278 ~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w 337 (722)
.+.||+||+|+|+..+... .+.+++|.+...|.+.++.+.+
T Consensus 221 -----~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 221 -----ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp -----HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred -----hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccC
Confidence 2458999999999987631 1346788888889998887643
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.84 E-value=1.5e-20 Score=206.02 Aligned_cols=244 Identities=16% Similarity=0.199 Sum_probs=148.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeec--CCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKM--EGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~--~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
++||+|||||++||+||+.|+++|++|+|+|+++++||+++|... .|. ...|.|++++...+ ..+..++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~------~~~~~G~~~~~~~~-~~~~~~~~~ 75 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNV------MVHVYGPHIFHTDN-ETVWNYVNK 75 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCC------EEETTSCCCEEESC-HHHHHHHHT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCc------eEeeCCceEECCCC-HHHHHHHHH
Confidence 379999999999999999999999999999999999999999887 443 23499999998654 456778999
Q ss_pred hCCCeeeecCCcceEecCCcccChhhhHH-HHHHHHHH--HHHHH-HHHHHhhc-cccCCCHHHHHHHHHHHhccCCCHH
Q 004948 125 LGSLLHKVRDKCPLYRLDGNSVDPEIDMK-VEADFNRL--LDKAS-RLRQLMGE-VAMDVSLGSALETFWRVYWDSGNAE 199 (722)
Q Consensus 125 LGl~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~l--l~~~~-~~~~~~~~-~~~~~s~~~~l~~~~~~~~~~~~~~ 199 (722)
+|.. ... ........+|..+..+.... ....+... ..... .+...... ...+.++++++... ++ ...
T Consensus 76 l~~~-~~~-~~~~~~~~~g~~~~~P~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~sl~e~~~~~---~g---~~~ 147 (384)
T 2bi7_A 76 HAEM-MPY-VNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDSTIADPQTFEEEALRF---IG---KEL 147 (384)
T ss_dssp TSCE-EEC-CCCEEEEETTEEEEESCCHHHHHHHTTCCCCHHHHHHHHHHHSCCSCSSCCBHHHHHHHH---HC---HHH
T ss_pred Hhhh-ccc-ccceEEEECCEEEECCCChhHHHHHhcccCCHHHHHHHHHHhhhccCCCCcCHHHHHHHh---hc---HHH
Confidence 9862 222 22334556776554433321 11111100 01111 11111111 13566777776432 11 111
Q ss_pred HHHHHHHHHHhhhhccchhhHHHHHHhhc---cCCCCCCCCCee-eeCCChHHHHHHHHH--cCCcccCceEE-EEEecC
Q 004948 200 AMNLFNWHLANLEYANASLLSKLSLAFWD---QDDPYDMGGDHC-FLPGGNGRLVQALVE--NVPILYEKTVH-TIRYGS 272 (722)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~---~~~~~~~~g~~~-~~~gG~~~L~~aLa~--~l~I~ln~~V~-~I~~~~ 272 (722)
...++.++...........++......+. ..+.....+.+. +++||+++++++|++ +++|++|++|+ +|..
T Consensus 148 ~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~-- 225 (384)
T 2bi7_A 148 YEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHENIKVDLQREFIVEERT-- 225 (384)
T ss_dssp HHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG--
T ss_pred HHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcCCCEEEECCeeehhhhc--
Confidence 22233333332222222222211110000 001111223343 899999999999997 45799999999 7853
Q ss_pred CcEEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcC
Q 004948 273 DGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFP 333 (722)
Q Consensus 273 ~~v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~ 333 (722)
.||+||+|+|+..+.+. .+..++|.+...+.+.++
T Consensus 226 ------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 226 ------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE
T ss_pred ------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC
Confidence 28999999999998641 134678888888888886
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.81 E-value=1.8e-19 Score=197.33 Aligned_cols=251 Identities=16% Similarity=0.134 Sum_probs=155.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeee-cCCCCCCCcceEeeccceEEcCCCCcHHHHHHHH
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKK-MEGGAGNRISASADLGGSVLTGTLGNPLGILAKQ 124 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~-~~g~~gn~~~~~~D~Ga~~~~~~~~~~l~~L~~e 124 (722)
..+||+|||||++||+||++|+++|++|+|+|+++++||++++.. ..|. ..+|.|+|++.... ..+..++++
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~------~~~~~G~~~~~~~~-~~~~~~~~~ 100 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGV------LIHPYGPHIFHTNS-KDVFEYLSR 100 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSC------EECTTSCCCCEESC-HHHHHHHHT
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCc------eEeecCCcccCCCh-HHHHHHHHH
Confidence 458999999999999999999999999999999999999999987 4443 23599999987553 556778999
Q ss_pred hCCCeeeecCCcceEecCCcccChhhhHHH-HHHHHHHH--HHHHHHHH-HhhccccCCCHHHHHHHHHHHhccCCCHHH
Q 004948 125 LGSLLHKVRDKCPLYRLDGNSVDPEIDMKV-EADFNRLL--DKASRLRQ-LMGEVAMDVSLGSALETFWRVYWDSGNAEA 200 (722)
Q Consensus 125 LGl~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~ll--~~~~~~~~-~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~ 200 (722)
+|... ........+.+|+.++.+..... ...+...+ .....+.. ......++.++++++... ++. ...
T Consensus 101 ~~~~~--~~~~~~~~~~~g~l~~lP~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~s~~e~~~~~---~G~---~~~ 172 (397)
T 3hdq_A 101 FTEWR--PYQHRVLASVDGQLLPIPINLDTVNRLYGLNLTSFQVEEFFASVAEKVEQVRTSEDVVVSK---VGR---DLY 172 (397)
T ss_dssp SCCEE--ECCCBEEEEETTEEEEESCCHHHHHHHHTCCCCHHHHHHHHHHHCCCCSSCCBHHHHHHHH---HHH---HHH
T ss_pred hhhcc--cccccceEEECCEEEEcCCChHHHHHhhccCCCHHHHHHHHhhcccCCCCCcCHHHHHHHh---cCH---HHH
Confidence 98532 22334556678887776654321 11111000 01111111 111224567888876532 121 112
Q ss_pred HHHHHHHHHhhhhccchhhHHHHHHhhccC---CCCCCCCCe-eeeCCChHHHHHHHHH--cCCcccCceEEEEEecCCc
Q 004948 201 MNLFNWHLANLEYANASLLSKLSLAFWDQD---DPYDMGGDH-CFLPGGNGRLVQALVE--NVPILYEKTVHTIRYGSDG 274 (722)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~---~~~~~~g~~-~~~~gG~~~L~~aLa~--~l~I~ln~~V~~I~~~~~~ 274 (722)
..++.++.........+.++.....-.... +.....+.+ .++.+|+++|+++|++ +++|++|++|+++
T Consensus 173 e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~------ 246 (397)
T 3hdq_A 173 NKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPNIKVMLNTDYREI------ 246 (397)
T ss_dssp HHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTTEEEEESCCGGGT------
T ss_pred HHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccCCEEEECCeEEec------
Confidence 223333333333333322221111111111 111111222 3689999999999987 6789999999743
Q ss_pred EEEEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcc
Q 004948 275 VQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFW 337 (722)
Q Consensus 275 v~V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w 337 (722)
+.++.||+||+|+|++.+.. . .+.+++|.++..+.+.++...+
T Consensus 247 ------~~~~~~d~vI~T~P~d~~~~----~----------~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 247 ------ADFIPFQHMIYTGPVDAFFD----F----------CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp ------TTTSCEEEEEECSCHHHHTT----T----------TTCCCCEEEEEEEEEEESSSCS
T ss_pred ------cccccCCEEEEcCCHHHHHH----H----------hcCCCCCceEEEEEEEeccccC
Confidence 23456899999999998742 1 2446788899999999886544
No 30
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.81 E-value=2.9e-18 Score=192.04 Aligned_cols=374 Identities=11% Similarity=0.098 Sum_probs=195.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCC-C---C-------------CCCcceEeeccce
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEG-G---A-------------GNRISASADLGGS 108 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g-~---~-------------gn~~~~~~D~Ga~ 108 (722)
..+||||||||++||+||+.|+++|++|+|||+++++||+++|++.+| + + +.+..+.+++|+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~ 89 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPK 89 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccccc
Confidence 348999999999999999999999999999999999999999977554 1 0 0111123344444
Q ss_pred EEcCCCCcHHHHHHHHhCCCee--eecCCcceEecCCcccChhhh-HH----------HHHHHHHHHHHHHHHHHHh---
Q 004948 109 VLTGTLGNPLGILAKQLGSLLH--KVRDKCPLYRLDGNSVDPEID-MK----------VEADFNRLLDKASRLRQLM--- 172 (722)
Q Consensus 109 ~~~~~~~~~l~~L~~eLGl~~~--~~~~~~~~~~~~G~~~~~~~~-~~----------~~~~~~~ll~~~~~~~~~~--- 172 (722)
++.. ...+..+++++|+... .......+.+.+|..+..+.+ .. ....+.+++..+..+....
T Consensus 90 ~l~~--~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (453)
T 2bcg_G 90 FLMA--NGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLST 167 (453)
T ss_dssp BEET--TSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGG
T ss_pred eeec--CcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchh
Confidence 4332 2467789999998532 111112333456765443322 10 0112222222221110000
Q ss_pred -hc-cccCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhh---hhccchhhHHH-H-HHhhccCCCCCCCCCeeeeCCC
Q 004948 173 -GE-VAMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANL---EYANASLLSKL-S-LAFWDQDDPYDMGGDHCFLPGG 245 (722)
Q Consensus 173 -~~-~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l-~-~~~~~~~~~~~~~g~~~~~~gG 245 (722)
.. .....++.+++..+ ..++..+.++....... .+........+ . ..+......+ ..+.+.++.||
T Consensus 168 ~~~~~~~~~s~~~~l~~~------~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG 240 (453)
T 2bcg_G 168 HQGLDLDKNTMDEVYYKF------GLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYG 240 (453)
T ss_dssp STTCCTTTSBHHHHHHHT------TCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTC
T ss_pred hhccccccCCHHHHHHHh------CCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCC
Confidence 00 01234555544321 23455555543322110 01100111111 0 0010000000 12456689999
Q ss_pred hHHHHHHHHH-----cCCcccCceEEEEEec--CCcEE-EEECCEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHH
Q 004948 246 NGRLVQALVE-----NVPILYEKTVHTIRYG--SDGVQ-VLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAI 317 (722)
Q Consensus 246 ~~~L~~aLa~-----~l~I~ln~~V~~I~~~--~~~v~-V~~~G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai 317 (722)
++.|+++|++ |.+|+++++|++|..+ ++++. |.++|+++.||.||+|+++..-. +
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~---l-------------- 303 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEK---C-------------- 303 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGG---E--------------
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchh---h--------------
Confidence 9999999975 5679999999999988 67654 55588999999999999875211 0
Q ss_pred HhcCCCceeEEEEEcCCCcc-cCCCCCceeeecC-C-CCCcceEE-Eeec---cccCCCcEEEEEecchhhhhhcCCCHH
Q 004948 318 KRLGYGLLNKVAMLFPYVFW-ETDLDTFGHLTDD-S-SSRGEFFL-FYSY---ATVAGGPLLIALVAGEAAHKFESMPPT 390 (722)
Q Consensus 318 ~~l~~~~~~kV~l~f~~~~w-~~~~~~~g~l~~~-~-~~~~~~~~-~~~~---~~p~g~~vl~~~v~g~~a~~~~~ls~e 390 (722)
++.+- .....++.+++++- .+.......+.+. . .....+++ ..+. ..|+|..++.+++..+. .+.+
T Consensus 304 ~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~------~~~~ 376 (453)
T 2bcg_G 304 KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIET------DKPH 376 (453)
T ss_dssp EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCS------SCHH
T ss_pred cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCC------CCHH
Confidence 11110 23333333666541 1111122222221 1 01122222 2222 25788888877776442 1223
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCceEEEecCCCCCCCCcccCCCCCCCCCccHHHHhcccCCCcEEEcccccccccCcc
Q 004948 391 DAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPAT 470 (722)
Q Consensus 391 el~~~vl~~L~~i~~~~~~~v~~p~~~~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l~~pv~~~~L~fAGd~ts~~~~g~ 470 (722)
+.++.+++ .+.+. ...... ..++ |. |-. .. ..+|||+||++... ..
T Consensus 377 ~~l~~~~~---~l~~~----~~~~~~--~~~~---------~~---~~~--------~~--~~~~~~~~~~~~~~---~~ 422 (453)
T 2bcg_G 377 IELEPAFK---LLGPI----EEKFMG--IAEL---------FE---PRE--------DG--SKDNIYLSRSYDAS---SH 422 (453)
T ss_dssp HHTHHHHG---GGCSC----SEEEEE--EEEE---------EE---ESS--------CS--TTTSEEECCCCCSC---SB
T ss_pred HHHHHHHH---HhhhH----HHhhcc--chhe---------ee---ecC--------CC--CCCCEEECCCCCcc---cc
Confidence 32333333 33221 011111 1111 11 000 01 12799999998864 36
Q ss_pred chHHHHHHHHHHHHHH
Q 004948 471 MHGAFLSGLRETAKMA 486 (722)
Q Consensus 471 ~eGAi~SG~~AA~~Il 486 (722)
+|+|+.++++++++|+
T Consensus 423 ~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 423 FESMTDDVKDIYFRVT 438 (453)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7999999999999997
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.78 E-value=6.4e-17 Score=164.24 Aligned_cols=59 Identities=32% Similarity=0.675 Sum_probs=54.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCCCCCCCcceEeeccceEEcC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTG 112 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g~~gn~~~~~~D~Ga~~~~~ 112 (722)
++||+|||||+|||+||+.|+++|++|+||||++++||++.+.+..+. .+|+|+.++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~-------~~d~g~~~~~~ 60 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAG-------ALDMGAQYFTA 60 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTE-------EEECSCCCBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCc-------eeecCcccccc
Confidence 389999999999999999999999999999999999999999988775 89999877653
No 32
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.73 E-value=1.8e-16 Score=172.08 Aligned_cols=86 Identities=33% Similarity=0.407 Sum_probs=69.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecC-CCcceeeeeeecCCCC---CCCcceEeeccceEEcCCCCcHHHHH
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR-KRAGGRVYTKKMEGGA---GNRISASADLGGSVLTGTLGNPLGIL 121 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~-~r~GGr~~T~~~~g~~---gn~~~~~~D~Ga~~~~~~~~~~l~~L 121 (722)
..+||+|||||++||+||+.|+++|++|+|||++ +++|||+.|.+..... ....+..+|.|++++...+ ..+..+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~-~~~~~~ 121 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFH-PLTLAL 121 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTC-HHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchH-HHHHHH
Confidence 3489999999999999999999999999999999 9999999998743100 0011358999999997664 456779
Q ss_pred HHHhCCCeeee
Q 004948 122 AKQLGSLLHKV 132 (722)
Q Consensus 122 ~~eLGl~~~~~ 132 (722)
++++|+.....
T Consensus 122 ~~~lGl~~~~~ 132 (376)
T 2e1m_A 122 IDKLGLKRRLF 132 (376)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHcCCCccee
Confidence 99999987654
No 33
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.71 E-value=1.2e-16 Score=177.91 Aligned_cols=242 Identities=15% Similarity=0.121 Sum_probs=146.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeee-cC-CC------------CCCCcceEeeccceEEcC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKK-ME-GG------------AGNRISASADLGGSVLTG 112 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~-~~-g~------------~gn~~~~~~D~Ga~~~~~ 112 (722)
++||+|||||++||+||+.|+++|++|+|+|+++++||++.|++ .. |. .+.+..+.+|+|++++..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~~ 85 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMA 85 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEET
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceeec
Confidence 48999999999999999999999999999999999999999988 21 00 011245689999998875
Q ss_pred CCCcHHHHHHHHhCCCee--eecCCcceEecCCcccChhhhH-H----------HHHHHHHHHHHHHHHHHHhh---c--
Q 004948 113 TLGNPLGILAKQLGSLLH--KVRDKCPLYRLDGNSVDPEIDM-K----------VEADFNRLLDKASRLRQLMG---E-- 174 (722)
Q Consensus 113 ~~~~~l~~L~~eLGl~~~--~~~~~~~~~~~~G~~~~~~~~~-~----------~~~~~~~ll~~~~~~~~~~~---~-- 174 (722)
. ..+..+++++|+... .......+.+.+|..+..+.+. . ....+.+++..+..+..... .
T Consensus 86 ~--~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 163 (433)
T 1d5t_A 86 N--GQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV 163 (433)
T ss_dssp T--SHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTTC
T ss_pred c--chHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhcccc
Confidence 4 467789999997632 1112223345567654333221 1 01122222222221100000 0
Q ss_pred cccCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhh---hhccchhhHH-HHH-HhhccCCCCCCCCCeeeeCCChHHH
Q 004948 175 VAMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANL---EYANASLLSK-LSL-AFWDQDDPYDMGGDHCFLPGGNGRL 249 (722)
Q Consensus 175 ~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~-l~~-~~~~~~~~~~~~g~~~~~~gG~~~L 249 (722)
.....++.++++.+ ..++..+.++...+... .+........ ... .+......+ ..+.++++.+|++.|
T Consensus 164 ~~~~~s~~~~l~~~------~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l 236 (433)
T 1d5t_A 164 DPQNTSMRDVYRKF------DLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGEL 236 (433)
T ss_dssp CTTTSBHHHHHHHT------TCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHH
T ss_pred ccccCCHHHHHHHc------CCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHH
Confidence 01344565555321 23555555544321110 0001111111 111 111111111 124577999999999
Q ss_pred HHHHHH-----cCCcccCceEEEEEecCCcEEE-EECCEEEEeCEEEEcCChhh
Q 004948 250 VQALVE-----NVPILYEKTVHTIRYGSDGVQV-LAGSQVFEGDMVLCTVPLGV 297 (722)
Q Consensus 250 ~~aLa~-----~l~I~ln~~V~~I~~~~~~v~V-~~~G~~~~AD~VI~AvP~~~ 297 (722)
+++|++ |.+|+++++|++|..+++++.+ .++|+++.||+||+|+|+..
T Consensus 237 ~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 237 PQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 999975 6789999999999998888774 44899999999999998764
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.64 E-value=1.7e-16 Score=155.03 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=102.4
Q ss_pred cEEEEEecchhhhhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCCceE--EEecCCCCCCCCcccCCCCCCCCCccHHHH
Q 004948 370 PLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQT--VCTRWGGDPFSLGSYSNVAVGASGDDYDIM 447 (722)
Q Consensus 370 ~vl~~~v~g~~a~~~~~ls~eel~~~vl~~L~~i~~~~~~~v~~p~~~--~~~rW~~~p~~~G~y~~~~pG~~~~~~~~l 447 (722)
.+|++|++++.+..+..++++++++.++++|.++|++. +..+... ..++|..+||+.|+|+.+.||.....++.+
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~---~~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l 113 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRR---IEVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDV 113 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGG---GGGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHH
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCC---cHhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHH
Confidence 58889999999999999999999999999999999753 3223366 889999999999999999999876667889
Q ss_pred hcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhhhh
Q 004948 448 AESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARAL 494 (722)
Q Consensus 448 ~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~~ 494 (722)
.+|. ++||||||+|+. |+||||||+.||++||++|++.++....
T Consensus 114 ~~p~--grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~~ 157 (181)
T 2e1m_C 114 VRPE--GPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDTG 157 (181)
T ss_dssp HSCB--TTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC----
T ss_pred hCCC--CcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9997 899999999996 8999999999999999999988765443
No 35
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.59 E-value=7.6e-15 Score=163.76 Aligned_cols=240 Identities=12% Similarity=0.140 Sum_probs=139.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCC-------------CCCCCcceEeeccceEEcC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEG-------------GAGNRISASADLGGSVLTG 112 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g-------------~~gn~~~~~~D~Ga~~~~~ 112 (722)
+.+||+|||||++|+++|+.|+++|++|+|+|+++++||++.+..... ..|+...+.+|++++++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 458999999999999999999999999999999999999999986431 0112235689999888854
Q ss_pred CCCcHHHHHHHHhCCCeeeec--CCcc-eEe--------cCCcccChhhh-----------HHHHHHHHHHHHHHHHHHH
Q 004948 113 TLGNPLGILAKQLGSLLHKVR--DKCP-LYR--------LDGNSVDPEID-----------MKVEADFNRLLDKASRLRQ 170 (722)
Q Consensus 113 ~~~~~l~~L~~eLGl~~~~~~--~~~~-~~~--------~~G~~~~~~~~-----------~~~~~~~~~ll~~~~~~~~ 170 (722)
. ..+..++.++|+..+... .... ++. ++|+..+.+.+ ..-+..+.+++..+..+.+
T Consensus 99 ~--g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~ 176 (475)
T 3p1w_A 99 G--GNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDA 176 (475)
T ss_dssp T--SHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCT
T ss_pred C--cHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhh
Confidence 3 357778888887633111 1111 121 13444332211 1111223333333222110
Q ss_pred H----hhcc-ccCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHhhhh----ccchhhHHHHH--HhhccCCCCCCCCCe
Q 004948 171 L----MGEV-AMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANLEY----ANASLLSKLSL--AFWDQDDPYDMGGDH 239 (722)
Q Consensus 171 ~----~~~~-~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~--~~~~~~~~~~~~g~~ 239 (722)
. .... ....++.++++.+ ..++....++ |+...+.. ........+.. .+......+ .+..+
T Consensus 177 ~~~~~~~~~~l~~~s~~e~l~~~------gls~~l~~fl-~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~ 248 (475)
T 3p1w_A 177 NKRNTWDNLDPYKLTMLEIYKHF------NLCQLTIDFL-GHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPF 248 (475)
T ss_dssp TCGGGSTTCCTTTSBHHHHHHHT------TCCHHHHHHH-HHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSE
T ss_pred ccchhhhcccccCCCHHHHHHHc------CCCHHHHHHH-HHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCce
Confidence 0 0001 1345666665432 2445444433 22211111 11111111110 111000001 12357
Q ss_pred eeeCCChHHHHHHHHH-----cCCcccCceEEEEEe-cCCcE-EEEE-CCEEEEeCEEEEcCCh
Q 004948 240 CFLPGGNGRLVQALVE-----NVPILYEKTVHTIRY-GSDGV-QVLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 240 ~~~~gG~~~L~~aLa~-----~l~I~ln~~V~~I~~-~~~~v-~V~~-~G~~~~AD~VI~AvP~ 295 (722)
.++++|++.|+++|++ |++|+++++|++|.. +++++ .|.+ +|++++||.||++...
T Consensus 249 ~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 249 IYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp EEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred EEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 8999999999999976 678999999999998 56664 4666 7789999999999854
No 36
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.39 E-value=3e-11 Score=138.68 Aligned_cols=85 Identities=12% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCeeeeCCChHHHHHHHHH-----cCCcccCceEEEEEecC--CcEEEEE--CCEEEEeCEEEEcCChhhhhcCCcccCC
Q 004948 237 GDHCFLPGGNGRLVQALVE-----NVPILYEKTVHTIRYGS--DGVQVLA--GSQVFEGDMVLCTVPLGVLKSGSIKFIP 307 (722)
Q Consensus 237 g~~~~~~gG~~~L~~aLa~-----~l~I~ln~~V~~I~~~~--~~v~V~~--~G~~~~AD~VI~AvP~~~l~~~~i~~~p 307 (722)
+.++++.||++.|+++|++ |..|+++++|++|..++ ++++++. +|++++||.||++. ..+..
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~lp~------- 438 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SYLSE------- 438 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GGBCT-------
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hhcCH-------
Confidence 4788999999999999976 56799999999999887 6666544 69999999999932 22211
Q ss_pred CCCHHHHHHHHhcCCCceeEEEEEcCCCcc
Q 004948 308 ELPQRKLDAIKRLGYGLLNKVAMLFPYVFW 337 (722)
Q Consensus 308 ~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w 337 (722)
.+ ..++.++.+.++.+.++++.-
T Consensus 439 ~~-------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 439 NT-------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp TT-------TTTCCCEEEEEEEEEESSCSS
T ss_pred hH-------hccccccceEEEEEEecCCCC
Confidence 11 122345678888888887653
No 37
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.18 E-value=3.3e-10 Score=122.77 Aligned_cols=38 Identities=34% Similarity=0.587 Sum_probs=35.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
+|||+|||||++||+||+.|+++|++|+|||+++.+|.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 48999999999999999999999999999999988764
No 38
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.13 E-value=7.8e-10 Score=121.38 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=37.1
Q ss_pred CCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhh
Q 004948 257 VPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGV 297 (722)
Q Consensus 257 l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~ 297 (722)
++|+++++|++|..++++|+|++ +|++++||.||.|.....
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 67999999999999999999988 888999999999987654
No 39
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.09 E-value=6e-10 Score=127.02 Aligned_cols=37 Identities=49% Similarity=0.695 Sum_probs=34.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
++||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4899999999999999999999999999999987654
No 40
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.05 E-value=2.3e-09 Score=115.09 Aligned_cols=41 Identities=39% Similarity=0.528 Sum_probs=37.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||++|+++|++|+|||+.+.+|+.+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s 44 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTS 44 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccC
Confidence 48999999999999999999999999999999988876543
No 41
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.04 E-value=9.6e-09 Score=111.49 Aligned_cols=42 Identities=12% Similarity=0.222 Sum_probs=36.6
Q ss_pred cCCcccCceEEEEEecCCcEEEEECCEEEEeCEEEEcCChhh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGV 297 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~~~ 297 (722)
|++|+++++|++|..+++++.|.+++.+++||.||+|+....
T Consensus 164 Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 164 GAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp TCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGGGH
T ss_pred CCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCccH
Confidence 688999999999999888888888666899999999998653
No 42
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.04 E-value=9.4e-10 Score=118.93 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=36.8
Q ss_pred cCCcccCceEEEEEecCCcEEEEECCEEEEeCEEEEcCChhh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGV 297 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~~~ 297 (722)
|++|+++++|++|..+++++.|++++.+++||.||+|+....
T Consensus 168 Gv~i~~~~~V~~i~~~~~~~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 168 QGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp TCEEESSCCCCEEEEETTEEEEECSSEEEEESEEEECCGGGH
T ss_pred CCEEEcCCEEEEEEEeCCeEEEEeCCCEEEcCEEEECCChhH
Confidence 788999999999999988888888555999999999998753
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.02 E-value=2.5e-09 Score=125.45 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=38.1
Q ss_pred cCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGV 297 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~ 297 (722)
|++|+++++|++|..++++|.|.+ +|+++.||.||+|+....
T Consensus 431 Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 431 GLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred CCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 788999999999999999998888 778899999999998764
No 44
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.01 E-value=2e-09 Score=119.30 Aligned_cols=40 Identities=33% Similarity=0.455 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~ 86 (722)
++||||||||++||+||++|+++|+ +|+|||+.+.+||..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~ 46 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAIS 46 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCc
Confidence 4899999999999999999999999 999999998887754
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.01 E-value=1.5e-09 Score=119.75 Aligned_cols=41 Identities=34% Similarity=0.562 Sum_probs=37.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
+++||+|||||++||+||+.|+++|++|+|||+.+.+||.+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 34899999999999999999999999999999999998765
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.98 E-value=3.5e-09 Score=124.42 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=37.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
..+||||||||++||+||++|+++|++|+|||+.+.+|+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~ga 303 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGA 303 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcccccc
Confidence 35899999999999999999999999999999998888644
No 47
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.98 E-value=3.5e-11 Score=109.83 Aligned_cols=107 Identities=21% Similarity=0.302 Sum_probs=69.2
Q ss_pred CEEEEeCEEEEcCChhhhhcCCcccCCCCCHHHHHHHHhcCCCceeEEEEEcCCCcccCCCCCceeeecCCCCCcceEEE
Q 004948 281 SQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLF 360 (722)
Q Consensus 281 G~~~~AD~VI~AvP~~~l~~~~i~~~p~Lp~~~~~ai~~l~~~~~~kV~l~f~~~~w~~~~~~~g~l~~~~~~~~~~~~~ 360 (722)
.++++||+||+|+|+.+++ .|.|.|+||+.+.+++++++|+...||++.|+++||+++...+.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd--------------- 65 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK--------------- 65 (130)
T ss_dssp CEEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH---------------
T ss_pred ceEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc---------------
Confidence 3578999999999999998 58999999999999999999999999999999999986422110
Q ss_pred eeccccCCCcEEEEEe-cchhhhhhcCCCHHHHHHHHHHHHHhhcCC
Q 004948 361 YSYATVAGGPLLIALV-AGEAAHKFESMPPTDAVTKVLQILKGIYEP 406 (722)
Q Consensus 361 ~~~~~p~g~~vl~~~v-~g~~a~~~~~ls~eel~~~vl~~L~~i~~~ 406 (722)
....+....++++|+ +|+.+..|..+++ +..+.+++.|.+++|.
T Consensus 66 -~s~~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 66 -RELDAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp -HHHHHHSTTHHHHHHHHCCCSCCCC---------------------
T ss_pred -ccCCCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 000111223777888 5888888988866 6688899999999973
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.96 E-value=2e-08 Score=109.21 Aligned_cols=38 Identities=34% Similarity=0.587 Sum_probs=35.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
++||+|||||++||++|+.|+++|++|+|+|+.+.+|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 38999999999999999999999999999999987765
No 49
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.93 E-value=2.5e-08 Score=112.64 Aligned_cols=40 Identities=38% Similarity=0.432 Sum_probs=35.3
Q ss_pred CCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 44 SSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 44 ~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.++++||+|||||++||++|+.|+++|++|+|||+.+.++
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 3456999999999999999999999999999999987654
No 50
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.92 E-value=5.6e-09 Score=113.17 Aligned_cols=40 Identities=25% Similarity=0.367 Sum_probs=35.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
+.++||+|||||++||+||++|+++|++|+|||+.+..+|
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 3458999999999999999999999999999999865544
No 51
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.92 E-value=1.4e-08 Score=115.01 Aligned_cols=41 Identities=39% Similarity=0.501 Sum_probs=38.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||||||||++||+||+.|+++|.+|+||||.+.+||..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 35899999999999999999999999999999999998854
No 52
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.91 E-value=3.8e-08 Score=111.15 Aligned_cols=39 Identities=36% Similarity=0.451 Sum_probs=35.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
++++||+|||||++||++|+.|+++|++|+|||+.+.++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 47 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERT 47 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-C
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 345999999999999999999999999999999987664
No 53
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.89 E-value=5.9e-08 Score=105.71 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=40.2
Q ss_pred HHHHHHHHcC--CcccCceEEEEEecCC-cEEEEE-CCEEEEeCEEEEcCChhhhh
Q 004948 248 RLVQALVENV--PILYEKTVHTIRYGSD-GVQVLA-GSQVFEGDMVLCTVPLGVLK 299 (722)
Q Consensus 248 ~L~~aLa~~l--~I~ln~~V~~I~~~~~-~v~V~~-~G~~~~AD~VI~AvP~~~l~ 299 (722)
.|.+.|.+.+ .|+++++|++++..++ +|+|++ +|++++||.||-|-...-..
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKV 168 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcch
Confidence 4455555554 4999999999987654 588888 99999999999998765443
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.88 E-value=6.1e-08 Score=106.42 Aligned_cols=36 Identities=47% Similarity=0.674 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
++||+|||||++||++|+.|+++|++|+|+|+.+.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 389999999999999999999999999999998644
No 55
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.87 E-value=3.3e-08 Score=113.44 Aligned_cols=38 Identities=32% Similarity=0.315 Sum_probs=33.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.++||+|||||++||++|+.|+++|++|+|||+.+.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 34899999999999999999999999999999987653
No 56
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.86 E-value=2.5e-08 Score=107.59 Aligned_cols=39 Identities=26% Similarity=0.404 Sum_probs=35.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
++||+|||||++||++|++|+++|++|+|||+.+..+|.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~ 40 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQH 40 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 389999999999999999999999999999998877653
No 57
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.85 E-value=5.2e-08 Score=106.25 Aligned_cols=50 Identities=16% Similarity=0.145 Sum_probs=39.3
Q ss_pred HHHHHHHH-HcCCcccCceEEEEEecCCcEEEEECCEEEEeCEEEEcCChh
Q 004948 247 GRLVQALV-ENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 247 ~~L~~aLa-~~l~I~ln~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~~ 296 (722)
..|.+.+. .+++|+++++|++|..++++|.|.+++.+++||.||+|+...
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCcC
Confidence 34444333 368899999999999988888887755589999999999764
No 58
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.85 E-value=2.1e-08 Score=108.69 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=35.9
Q ss_pred cCCcccCceEEEEEecCCcEE-EEECCEEEEeCEEEEcCChhh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQ-VLAGSQVFEGDMVLCTVPLGV 297 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~-V~~~G~~~~AD~VI~AvP~~~ 297 (722)
+++|+++++|++|..++++|. |.+++.+++||.||+|+....
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETTEEEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEECCEEEEEEECCcEEECCEEEECcchhH
Confidence 688999999999999888887 777444899999999998653
No 59
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.83 E-value=1.3e-08 Score=110.95 Aligned_cols=38 Identities=34% Similarity=0.474 Sum_probs=34.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHH-CC-CcEEEEecCCCcce
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMR-LG-FRVTVLEGRKRAGG 84 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak-~G-~~V~VLEa~~r~GG 84 (722)
.++||+|||||++||++|++|++ +| ++|+|||+.+ +|+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~~ 59 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LAG 59 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CCC
Confidence 45899999999999999999999 99 9999999988 554
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.82 E-value=1.9e-08 Score=110.43 Aligned_cols=40 Identities=43% Similarity=0.642 Sum_probs=37.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|+++|.+|+|||+.+.+|+.+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 3899999999999999999999999999999999887654
No 61
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.81 E-value=2.4e-08 Score=114.89 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+||+|||||++||+||+.|++.|++|+|+|+.+.++
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 4899999999999999999999999999999986544
No 62
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.81 E-value=1.1e-07 Score=107.71 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
++||+|||||++||++|+.|++.|++|+|||+.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 389999999999999999999999999999998743
No 63
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.79 E-value=1.9e-08 Score=109.94 Aligned_cols=44 Identities=14% Similarity=-0.000 Sum_probs=38.7
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVL 298 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l 298 (722)
.+++|+++++|++|..++++|+|++ +|++++||.||.|......
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 3688999999999999988999888 8889999999999987644
No 64
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.78 E-value=1.1e-07 Score=109.09 Aligned_cols=41 Identities=32% Similarity=0.498 Sum_probs=37.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||+|||||++||+||+.|+++|.+|+|||+.+.+||..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 34899999999999999999999999999999999988743
No 65
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.77 E-value=1.7e-08 Score=112.46 Aligned_cols=41 Identities=32% Similarity=0.462 Sum_probs=37.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||+|||||++||+||+.|+++|.+|+|||+.+.+|+.+
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~ 65 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKL 65 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCcee
Confidence 34899999999999999999999999999999999888643
No 66
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.77 E-value=1.5e-07 Score=108.03 Aligned_cols=40 Identities=33% Similarity=0.511 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.+||+|||||++||+||+.|+++|.+|+|||+.+.+||..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 4899999999999999999999999999999999988754
No 67
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.73 E-value=2.1e-08 Score=106.85 Aligned_cols=40 Identities=35% Similarity=0.586 Sum_probs=37.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~ 42 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW 42 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 3799999999999999999999999999999999999754
No 68
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.71 E-value=2.2e-08 Score=114.32 Aligned_cols=48 Identities=33% Similarity=0.571 Sum_probs=41.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeeeeecCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEG 93 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T~~~~g 93 (722)
.++||+|||||++||+||+.|++.|++|+|||+++.+||.+...+..|
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg 67 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPG 67 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTT
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCC
Confidence 348999999999999999999999999999999999998665444433
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.68 E-value=6.5e-08 Score=110.39 Aligned_cols=42 Identities=43% Similarity=0.614 Sum_probs=38.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T 88 (722)
++||+|||||++||+||+.|++.|++|+|||+++.+||.+..
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 489999999999999999999999999999999999986643
No 70
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.68 E-value=5.2e-08 Score=106.57 Aligned_cols=53 Identities=9% Similarity=0.093 Sum_probs=42.0
Q ss_pred HHHHHHHHHc---CCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChhhhh
Q 004948 247 GRLVQALVEN---VPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLGVLK 299 (722)
Q Consensus 247 ~~L~~aLa~~---l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~~l~ 299 (722)
..|.+.|.+. ++|+++++|++|..++++|+|++ +|++++||.||.|.......
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKV 184 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSC
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhH
Confidence 3444445443 46999999999999888899888 78899999999999876543
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.68 E-value=4.4e-08 Score=111.68 Aligned_cols=47 Identities=30% Similarity=0.567 Sum_probs=40.9
Q ss_pred CCcEEEECccHHHHHHHHHHH-HCCCcEEEEecCCCcceeeeeeecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLM-RLGFRVTVLEGRKRAGGRVYTKKMEG 93 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~La-k~G~~V~VLEa~~r~GGr~~T~~~~g 93 (722)
++||+|||||++||+||+.|+ +.|++|+|+|+++.+||.+......|
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg 55 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPG 55 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCC
Confidence 389999999999999999999 89999999999999998665444433
No 72
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.63 E-value=4.6e-08 Score=111.25 Aligned_cols=42 Identities=33% Similarity=0.430 Sum_probs=38.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
..+||+|||||++||+||+.|++.|++|+|||+.+.+++|..
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~ 147 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTK 147 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCccccccc
Confidence 348999999999999999999999999999999999987653
No 73
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.62 E-value=6.8e-08 Score=110.65 Aligned_cols=40 Identities=30% Similarity=0.441 Sum_probs=36.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.+||+|||||++||++|+.|+++|++|+|+|+++..||..
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 4999999999999999999999999999999998776643
No 74
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.60 E-value=1.1e-07 Score=103.77 Aligned_cols=43 Identities=16% Similarity=0.280 Sum_probs=37.4
Q ss_pred cCCcccCceEEEEEecCCcE--EEEE-CCEEEEeCEEEEcCChhhh
Q 004948 256 NVPILYEKTVHTIRYGSDGV--QVLA-GSQVFEGDMVLCTVPLGVL 298 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v--~V~~-~G~~~~AD~VI~AvP~~~l 298 (722)
+++|+++++|++|..++++| .|++ +|++++||.||.|......
T Consensus 122 gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 122 TVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp TEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred CcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 57899999999999988888 8888 7789999999999986543
No 75
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.59 E-value=1.5e-07 Score=112.96 Aligned_cols=36 Identities=33% Similarity=0.601 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~ 82 (722)
++||+|||||++||++|++|+++|+ +|+|||+.+.+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 4899999999999999999999998 99999998764
No 76
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.58 E-value=1.3e-07 Score=105.22 Aligned_cols=40 Identities=35% Similarity=0.535 Sum_probs=37.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~GGr~ 86 (722)
.+||+|||||++||+||+.|++.|. +|+|||+++.+||..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 4899999999999999999999999 999999999999854
No 77
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.57 E-value=8.9e-08 Score=101.65 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 4899999999999999999999999999999999998755
No 78
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.56 E-value=2.1e-07 Score=102.14 Aligned_cols=37 Identities=35% Similarity=0.597 Sum_probs=34.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc-EEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFR-VTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~-V~VLEa~~r~G 83 (722)
.+||+|||||++||++|+.|++.|++ |+|||+.+.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 38999999999999999999999999 99999988764
No 79
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.55 E-value=1.6e-07 Score=98.61 Aligned_cols=39 Identities=28% Similarity=0.449 Sum_probs=35.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||+.|++.|++|+|+|++ +||.+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~ 53 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLT 53 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeec
Confidence 479999999999999999999999999999997 887553
No 80
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.53 E-value=1.4e-06 Score=100.05 Aligned_cols=40 Identities=40% Similarity=0.534 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.+||+|||||++||+||+.|++.|++|+|||+.+.+||..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 4799999999999999999999999999999999998754
No 81
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.52 E-value=2e-07 Score=106.26 Aligned_cols=42 Identities=33% Similarity=0.536 Sum_probs=38.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T 88 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||....
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~ 50 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYW 50 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 489999999999999999999999999999999999986543
No 82
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.40 E-value=1.1e-07 Score=101.26 Aligned_cols=41 Identities=29% Similarity=0.567 Sum_probs=37.8
Q ss_pred CcEEEECccHHHHHHHHHHHH--CCCcEEEEecCCCcceeeee
Q 004948 48 LRVLVIGAGLAGLAAARQLMR--LGFRVTVLEGRKRAGGRVYT 88 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak--~G~~V~VLEa~~r~GGr~~T 88 (722)
+||+|||||+|||+||++|++ .|++|+|||+.+.+||.+..
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 899999999999999999985 59999999999999997753
No 83
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.35 E-value=6.4e-06 Score=94.71 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=35.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
++||+|||||++||+||+.|+++|.+|+|||+....||.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 389999999999999999999999999999998877653
No 84
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.32 E-value=4.7e-07 Score=103.46 Aligned_cols=37 Identities=27% Similarity=0.324 Sum_probs=34.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
++||+|||||++||++|+.|++.|++|+|||+.+.++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~ 62 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTI 62 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 3799999999999999999999999999999988665
No 85
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.29 E-value=1.1e-05 Score=93.15 Aligned_cols=39 Identities=31% Similarity=0.399 Sum_probs=35.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
.+||||||||+|||+||+.|+++|.+|+|||+....||.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 489999999999999999999999999999998766653
No 86
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.27 E-value=4.2e-07 Score=95.63 Aligned_cols=40 Identities=30% Similarity=0.517 Sum_probs=36.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
+|||+|||||+|||+||++|++.|++|+|+|+ +.+||.|.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~ 45 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMA 45 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeee
Confidence 49999999999999999999999999999998 57888764
No 87
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.24 E-value=5.8e-07 Score=94.32 Aligned_cols=39 Identities=31% Similarity=0.419 Sum_probs=34.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
++|||+|||||+|||+||++|+++|++|+|+|+. .+||.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~ 43 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNR 43 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCe
Confidence 3599999999999999999999999999999995 56664
No 88
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.19 E-value=6.8e-07 Score=93.76 Aligned_cols=38 Identities=39% Similarity=0.486 Sum_probs=34.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
+.|||+|||||+|||+||.+|++.|++|+|+|+.. .||
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg 40 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGG 40 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCC
Confidence 35899999999999999999999999999999954 444
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.16 E-value=7.4e-07 Score=94.22 Aligned_cols=44 Identities=34% Similarity=0.429 Sum_probs=38.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEec----CCCcceeeee
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG----RKRAGGRVYT 88 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa----~~r~GGr~~T 88 (722)
..++||+|||||++||+||+.|++.|++|+|+|+ +..+||.+..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 3458999999999999999999999999999999 4578876553
No 90
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.10 E-value=1.4e-06 Score=93.59 Aligned_cols=42 Identities=24% Similarity=0.341 Sum_probs=38.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 358999999999999999999999999999999999988653
No 91
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.08 E-value=1.6e-06 Score=97.39 Aligned_cols=40 Identities=40% Similarity=0.591 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||++|++.|++|+|+|+ +.+||.|.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 65 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCV 65 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCcee
Confidence 58999999999999999999999999999999 78888654
No 92
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.08 E-value=2.5e-06 Score=91.73 Aligned_cols=37 Identities=35% Similarity=0.596 Sum_probs=33.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.++||+|||||++||++|++|+++|++|+|||+....
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 3489999999999999999999999999999997633
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.07 E-value=1.7e-06 Score=91.26 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=37.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 3799999999999999999999999999999999999865
No 94
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.07 E-value=1.9e-06 Score=90.80 Aligned_cols=41 Identities=39% Similarity=0.627 Sum_probs=36.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
.++||+|||||++||+||+.|++.|++|+|+|+ ..+||.+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 348999999999999999999999999999999 57787553
No 95
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.06 E-value=1.9e-06 Score=96.90 Aligned_cols=41 Identities=34% Similarity=0.603 Sum_probs=37.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||.|.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 48999999999999999999999999999999999998553
No 96
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.05 E-value=2e-06 Score=89.49 Aligned_cols=39 Identities=36% Similarity=0.586 Sum_probs=36.5
Q ss_pred CcEEEECccHHHHHHHHHHHHC-CCcEEEEecCCCcceee
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~GGr~ 86 (722)
+||+|||||++||+||+.|++. |.+|+|+|+.+.+||.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 8999999999999999999997 99999999999998743
No 97
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.05 E-value=1.7e-06 Score=90.38 Aligned_cols=41 Identities=37% Similarity=0.527 Sum_probs=37.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEE-EecCCCcceeee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTV-LEGRKRAGGRVY 87 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~V-LEa~~r~GGr~~ 87 (722)
+++||+|||||++||+||+.|++.|++|+| +|+ +.+||.+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 358999999999999999999999999999 999 78888654
No 98
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.05 E-value=2.4e-06 Score=96.88 Aligned_cols=55 Identities=33% Similarity=0.485 Sum_probs=34.1
Q ss_pred HhhhccccccccccccCCCCCCCCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 23 SNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 23 ~~g~~~~g~~~~~~~~~p~~~~~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+.|+++++.........+ ...++||+|||||++||+||..|++.|++|+|+|+.+
T Consensus 11 ~~~~~~~~~~m~~~~~~~---~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 11 SSGLVPRGSHMNGPEDLP---KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp ---------------CCC---SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCCcccCCCCCCcccccC---cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 467888877655443333 2235899999999999999999999999999999965
No 99
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.04 E-value=3.3e-06 Score=94.06 Aligned_cols=41 Identities=49% Similarity=0.627 Sum_probs=38.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
..+||+|||||+|||+||++|++.|++|+|||+.+++||..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 34899999999999999999999999999999999999864
No 100
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.02 E-value=2.2e-06 Score=91.22 Aligned_cols=41 Identities=34% Similarity=0.643 Sum_probs=37.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~GGr~~ 87 (722)
.+||+|||||++||+||++|+++ |++|+|+|+.+.+||.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 38999999999999999999997 999999999999987553
No 101
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.01 E-value=2.3e-06 Score=95.42 Aligned_cols=40 Identities=33% Similarity=0.528 Sum_probs=37.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||++|++.|++|+|+|+ +.+||.|.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 48999999999999999999999999999999 78888553
No 102
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.00 E-value=4.1e-06 Score=94.99 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=37.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||+|||||++|++||++|++.|++|+|+|+++.+||.|
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 82 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSC 82 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 45899999999999999999999999999999998888755
No 103
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.99 E-value=3.1e-06 Score=94.59 Aligned_cols=41 Identities=32% Similarity=0.546 Sum_probs=38.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++|++||++|++.|++|+|+|+++.+||.|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 48999999999999999999999999999999989998653
No 104
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.99 E-value=3.4e-06 Score=89.00 Aligned_cols=40 Identities=35% Similarity=0.494 Sum_probs=36.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||+.|++.|++|+|+|++ .+||.+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 489999999999999999999999999999998 7888654
No 105
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.98 E-value=2.8e-06 Score=90.89 Aligned_cols=37 Identities=32% Similarity=0.424 Sum_probs=33.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCC------CcEEEEecCCCcce
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG------FRVTVLEGRKRAGG 84 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G------~~V~VLEa~~r~GG 84 (722)
+||+|||||++||++|++|+++| .+|+|||+....+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 58999999999999999999998 89999999775444
No 106
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.98 E-value=2.9e-06 Score=94.79 Aligned_cols=41 Identities=34% Similarity=0.514 Sum_probs=38.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||.|.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 38999999999999999999999999999999999998654
No 107
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=4.6e-06 Score=93.15 Aligned_cols=41 Identities=37% Similarity=0.630 Sum_probs=37.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 35999999999999999999999999999999998898755
No 108
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.95 E-value=4.9e-06 Score=93.09 Aligned_cols=40 Identities=38% Similarity=0.610 Sum_probs=37.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|++.|++|+|+|+++.+||+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 4999999999999999999999999999999998887654
No 109
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.94 E-value=4.5e-06 Score=97.93 Aligned_cols=44 Identities=45% Similarity=0.672 Sum_probs=40.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeee
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T 88 (722)
...+||+|||||++||+||+.|++.|++|+|+|+++++||.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 34589999999999999999999999999999999999998654
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.94 E-value=5.4e-06 Score=89.72 Aligned_cols=38 Identities=34% Similarity=0.433 Sum_probs=35.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
.+||+|||||++||++|+.|++.|++|+|+|+.+.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 48999999999999999999999999999999887653
No 111
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.93 E-value=3.6e-06 Score=94.27 Aligned_cols=40 Identities=43% Similarity=0.676 Sum_probs=36.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||+|||||++||+||+.|++.|++|+|+|++ .+||.|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcc
Confidence 3589999999999999999999999999999975 788865
No 112
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.93 E-value=6.6e-06 Score=85.11 Aligned_cols=37 Identities=35% Similarity=0.527 Sum_probs=33.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
++||+|||||++||+||+.|++.|++|+|+|+++..+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~ 38 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN 38 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc
Confidence 3799999999999999999999999999999976433
No 113
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.91 E-value=5.7e-06 Score=86.59 Aligned_cols=39 Identities=31% Similarity=0.498 Sum_probs=35.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecCCCcceeee
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRVY 87 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~~ 87 (722)
+||+|||||++||+||+.|++.|+ +|+|+|+ +.+||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~ 41 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQIT 41 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCcccc
Confidence 799999999999999999999999 9999999 46777553
No 114
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.91 E-value=6.3e-06 Score=92.95 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=33.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
++||+|||||++|+++|+.|+++|++|+|+|+.+..+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~ 39 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLAC 39 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCC
Confidence 4899999999999999999999999999999986443
No 115
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.90 E-value=5.4e-06 Score=88.94 Aligned_cols=40 Identities=35% Similarity=0.525 Sum_probs=36.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||+.|++.|+ +|+|||+++ +||.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~ 44 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFK 44 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccc
Confidence 3799999999999999999999999 999999988 888543
No 116
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.89 E-value=5.5e-06 Score=92.19 Aligned_cols=40 Identities=43% Similarity=0.639 Sum_probs=37.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 7999999999999999999999999999999989998653
No 117
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.89 E-value=5.6e-06 Score=87.60 Aligned_cols=39 Identities=31% Similarity=0.566 Sum_probs=36.6
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcceee
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~GGr~ 86 (722)
+||+|||||++||+||+.|++. |++|+|+|+.+.+||.+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 6999999999999999999998 99999999999998744
No 118
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.88 E-value=5.3e-06 Score=90.82 Aligned_cols=37 Identities=32% Similarity=0.419 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
++||+|||||++||++|++|+++ |++|+|||+.+..+
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN 74 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 48999999999999999999999 99999999975444
No 119
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.87 E-value=4.9e-06 Score=92.19 Aligned_cols=38 Identities=34% Similarity=0.484 Sum_probs=34.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEecCCCcce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKRAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r~GG 84 (722)
++||+|||||++||++|++|+++| ++|+|||+.+.+|+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 489999999999999999999999 99999999656653
No 120
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.87 E-value=7.1e-06 Score=87.08 Aligned_cols=40 Identities=38% Similarity=0.478 Sum_probs=35.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.++||+|||||++||+||+.|++.|++|+|+|+. .+||.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 4589999999999999999999999999999974 677644
No 121
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.86 E-value=9.6e-06 Score=81.67 Aligned_cols=34 Identities=35% Similarity=0.537 Sum_probs=32.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++||+|||||++||+||+.|++.|.+|+|+|++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4899999999999999999999999999999984
No 122
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.86 E-value=8.5e-06 Score=93.39 Aligned_cols=38 Identities=32% Similarity=0.530 Sum_probs=35.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
++||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 48999999999999999999999999999999875555
No 123
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.86 E-value=7.8e-06 Score=88.81 Aligned_cols=36 Identities=33% Similarity=0.511 Sum_probs=33.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
++||+|||||++||++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 379999999999999999999999999999998754
No 124
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.86 E-value=6e-06 Score=92.36 Aligned_cols=40 Identities=35% Similarity=0.583 Sum_probs=37.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 4899999999999999999999999999999998999865
No 125
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.85 E-value=6.1e-06 Score=92.38 Aligned_cols=40 Identities=38% Similarity=0.626 Sum_probs=37.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 3899999999999999999999999999999999888755
No 126
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.85 E-value=9.1e-06 Score=88.09 Aligned_cols=35 Identities=37% Similarity=0.591 Sum_probs=33.1
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~ 82 (722)
+||+|||||++||++|+.|+++ |++|+|||+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998776
No 127
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.85 E-value=1.2e-05 Score=90.64 Aligned_cols=39 Identities=41% Similarity=0.577 Sum_probs=36.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
..+||+|||||++||++|..|++.|++|+|+|+.+.+|+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 358999999999999999999999999999999988763
No 128
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.84 E-value=7.7e-06 Score=91.87 Aligned_cols=32 Identities=41% Similarity=0.645 Sum_probs=31.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEec
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (722)
++||+|||||++||+||..|++.|++|+|+|+
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 48999999999999999999999999999998
No 129
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.84 E-value=1e-05 Score=95.40 Aligned_cols=43 Identities=40% Similarity=0.646 Sum_probs=39.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeeee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYT 88 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~T 88 (722)
..+||+|||||+|||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 4589999999999999999999999999999999999997653
No 130
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.83 E-value=6.3e-06 Score=92.43 Aligned_cols=40 Identities=33% Similarity=0.520 Sum_probs=37.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||+.|++.|++|+|+|+++.+||.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 4899999999999999999999999999999998998754
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.83 E-value=9.7e-06 Score=90.47 Aligned_cols=40 Identities=38% Similarity=0.521 Sum_probs=36.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||++|++.|++|+|+|++ .+||.+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 489999999999999999999999999999997 7888553
No 132
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.83 E-value=8.1e-06 Score=93.82 Aligned_cols=39 Identities=38% Similarity=0.641 Sum_probs=36.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHC------CCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL------GFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~------G~~V~VLEa~~r~GGr 85 (722)
++||+|||||++||+||+.|++. |++|+|||+.+.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 48999999999999999999999 9999999999988864
No 133
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.82 E-value=1e-05 Score=90.27 Aligned_cols=40 Identities=28% Similarity=0.485 Sum_probs=37.7
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCc---EEEEecCCCcceeee
Q 004948 48 LRVLVIGAGLAGLAAARQLMR---LGFR---VTVLEGRKRAGGRVY 87 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~---V~VLEa~~r~GGr~~ 87 (722)
+||+|||||++||+||..|++ .|++ |+|||+++.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 799999999999999999999 9999 999999999998654
No 134
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.82 E-value=7.9e-06 Score=86.38 Aligned_cols=39 Identities=28% Similarity=0.457 Sum_probs=34.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEec----CCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG----RKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa----~~r~GGr 85 (722)
++||+|||||++||+||+.|++.|++|+|+|+ ...+||.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~ 50 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ 50 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce
Confidence 37999999999999999999999999999998 4555554
No 135
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.81 E-value=1.1e-05 Score=89.08 Aligned_cols=34 Identities=41% Similarity=0.498 Sum_probs=32.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++||+|||||++||++|+.|+++|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999976
No 136
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.81 E-value=9.5e-06 Score=90.53 Aligned_cols=39 Identities=33% Similarity=0.637 Sum_probs=36.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||++|++.|++|+|+|++ .+||.|
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTC 42 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcC
Confidence 489999999999999999999999999999997 778754
No 137
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.79 E-value=9.4e-06 Score=91.26 Aligned_cols=40 Identities=33% Similarity=0.449 Sum_probs=35.4
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEe--------cCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLE--------GRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLE--------a~~r~GGr~ 86 (722)
++||+|||||++|++||++|++ .|++|+|+| +.+.+||.|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c 51 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTC 51 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccc
Confidence 4899999999999999999999 999999999 356677644
No 138
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.79 E-value=8.4e-06 Score=90.82 Aligned_cols=40 Identities=33% Similarity=0.579 Sum_probs=37.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++|++||..|++.|++|+|+|+ +.+||.|.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 48999999999999999999999999999999 78998664
No 139
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.79 E-value=9.2e-06 Score=90.30 Aligned_cols=36 Identities=39% Similarity=0.666 Sum_probs=33.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
++||+|||||++||+||+.|+++|++|+|||+.+.+
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 389999999999999999999999999999998764
No 140
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.79 E-value=9e-06 Score=91.11 Aligned_cols=39 Identities=33% Similarity=0.585 Sum_probs=36.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||+.|++.|++|+|+|++ .+||.|
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~ 49 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTC 49 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHH
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcC
Confidence 489999999999999999999999999999996 678755
No 141
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.79 E-value=8.9e-06 Score=91.51 Aligned_cols=39 Identities=31% Similarity=0.480 Sum_probs=35.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|++.|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 389999999999999999999999999999995 588755
No 142
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.78 E-value=9.2e-06 Score=85.26 Aligned_cols=39 Identities=28% Similarity=0.560 Sum_probs=35.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++||+||+.|++.|++|+|+|+ +.+||.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 43 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQL 43 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceE
Confidence 38999999999999999999999999999997 5788755
No 143
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.78 E-value=9.3e-06 Score=90.23 Aligned_cols=40 Identities=23% Similarity=0.487 Sum_probs=36.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++|++||++|++.|++|+|+|++ .+||.|.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 489999999999999999999999999999997 7887653
No 144
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=1.1e-05 Score=89.69 Aligned_cols=39 Identities=38% Similarity=0.583 Sum_probs=36.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||..|++.|++|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 489999999999999999999999999999997 788755
No 145
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.76 E-value=8.8e-06 Score=91.63 Aligned_cols=40 Identities=35% Similarity=0.505 Sum_probs=34.9
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEe--------cCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLE--------GRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLE--------a~~r~GGr~ 86 (722)
++||+|||||++|++||++|++ .|++|+|+| +++.+||.|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~ 55 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTC 55 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCee
Confidence 4899999999999999999999 999999999 345666644
No 146
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.75 E-value=1.5e-05 Score=89.44 Aligned_cols=33 Identities=39% Similarity=0.554 Sum_probs=31.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEec
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (722)
.++||+|||||++||+||++|++.|++|+|+|+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 359999999999999999999999999999995
No 147
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.75 E-value=2.1e-05 Score=75.56 Aligned_cols=33 Identities=45% Similarity=0.753 Sum_probs=31.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+||+|||||++|+.+|..|++.|.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999976
No 148
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.75 E-value=8.8e-06 Score=91.65 Aligned_cols=40 Identities=30% Similarity=0.419 Sum_probs=36.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHC---CCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL---GFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~---G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++|++||++|++. |++|+|+|+++ +||.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 38999999999999999999999 99999999988 888553
No 149
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.74 E-value=1.3e-05 Score=93.26 Aligned_cols=39 Identities=36% Similarity=0.359 Sum_probs=35.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
++||+|||||++||+||+.|+++|.+|+|||+....+|.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 389999999999999999999999999999998766553
No 150
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.74 E-value=1.6e-05 Score=92.09 Aligned_cols=40 Identities=28% Similarity=0.517 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
.+||+|||||++||+||++|++.|++|+|+|+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4899999999999999999999999999999999999844
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.72 E-value=1.6e-05 Score=83.02 Aligned_cols=37 Identities=41% Similarity=0.635 Sum_probs=33.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
+||+|||||++||+||+.|++.|++|+|+|+ ++||.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~ 38 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQI 38 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCcee
Confidence 7999999999999999999999999999985 467654
No 152
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.71 E-value=1.7e-05 Score=89.47 Aligned_cols=40 Identities=38% Similarity=0.600 Sum_probs=36.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||+.|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~ 41 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCV 41 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccc
Confidence 389999999999999999999999999999997 5787653
No 153
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.71 E-value=1.7e-05 Score=90.31 Aligned_cols=38 Identities=37% Similarity=0.490 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
.+||+|||||++||+||+.|++ |.+|+|||+.+..||.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 4899999999999999999999 9999999999877764
No 154
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.71 E-value=2.5e-05 Score=91.33 Aligned_cols=43 Identities=35% Similarity=0.506 Sum_probs=39.3
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
...+||+|||||+|||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 3458999999999999999999999999999999999998654
No 155
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.70 E-value=1.6e-05 Score=88.66 Aligned_cols=38 Identities=34% Similarity=0.558 Sum_probs=35.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
+||+|||||++|++||+.|++.|++|+|+|++ .+||.+
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 79999999999999999999999999999997 777654
No 156
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.68 E-value=2.5e-05 Score=88.78 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHH---CCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~ 80 (722)
.+||+|||||++||++|+.|++ .|++|+|||+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4899999999999999999999 999999999965
No 157
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.67 E-value=1.7e-05 Score=88.18 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=35.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-----CcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG-----FRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-----~~V~VLEa~~r~G 83 (722)
.+||+|||||++||+||+.|++.| .+|+|||+++.+|
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 479999999999999999999999 9999999999887
No 158
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.66 E-value=2.6e-05 Score=90.58 Aligned_cols=37 Identities=32% Similarity=0.521 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r~G 83 (722)
++||+|||||++||++|+.|++ .|++|+|||+.+.++
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4799999999999999999999 999999999987653
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.65 E-value=2e-05 Score=87.98 Aligned_cols=39 Identities=33% Similarity=0.582 Sum_probs=35.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 3899999999999999999999999999999977 88754
No 160
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.64 E-value=3e-05 Score=86.74 Aligned_cols=36 Identities=42% Similarity=0.711 Sum_probs=33.0
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
||+|||||++||+||+.|++.|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 7999999999999999999999999999998 55553
No 161
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.64 E-value=3.8e-05 Score=82.56 Aligned_cols=39 Identities=46% Similarity=0.566 Sum_probs=35.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr 85 (722)
++||+|||||++|+.||+.|++.|++|+|+|++...+.-
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp 39 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTP 39 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCc
Confidence 379999999999999999999999999999998866543
No 162
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.63 E-value=3.1e-05 Score=88.65 Aligned_cols=37 Identities=32% Similarity=0.519 Sum_probs=34.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC-Ccc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK-RAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~-r~G 83 (722)
++||+|||||+||++||+.|++.|.+|+|+|+.. .+|
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 4999999999999999999999999999999974 555
No 163
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.63 E-value=2.6e-05 Score=87.89 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHH---CCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~ 80 (722)
.+||||||||++|+++|+.|++ .|++|+|+|+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 3799999999999999999999 999999999975
No 164
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.59 E-value=3.5e-05 Score=88.48 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=34.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC-Ccce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK-RAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~-r~GG 84 (722)
++||+|||||++|++||+.|++.|.+|+|+|+.. .+|+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 4999999999999999999999999999999974 4553
No 165
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.59 E-value=1.9e-05 Score=88.85 Aligned_cols=40 Identities=35% Similarity=0.619 Sum_probs=37.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
++||+|||||++||+||++|++. ++|+|||+++++||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 36899999999999999999999 99999999999998764
No 166
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.59 E-value=3.7e-05 Score=94.11 Aligned_cols=40 Identities=33% Similarity=0.632 Sum_probs=37.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCCCcceee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRKRAGGRV 86 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~r~GGr~ 86 (722)
.+||+|||||+|||+||++|++.|+ +|+|||+.+++||.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 4899999999999999999999999 799999999999965
No 167
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.59 E-value=3.2e-05 Score=84.57 Aligned_cols=38 Identities=32% Similarity=0.340 Sum_probs=34.9
Q ss_pred CcEEEECccHHHHHHHHHHHH---CCCcEEEEecCCCccee
Q 004948 48 LRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~r~GGr 85 (722)
+||+|||||++||+||++|++ .|++|+|+|+++.++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~ 42 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR 42 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec
Confidence 689999999999999999999 89999999999976553
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.58 E-value=3.5e-05 Score=88.84 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=35.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEecCCCccee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKRAGGR 85 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r~GGr 85 (722)
++||+|||||++||+||+.|+++| .+|+|||+....+|.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 389999999999999999999999 999999998776653
No 169
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.58 E-value=4.4e-05 Score=86.55 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=32.4
Q ss_pred CCcEEEECccHHHHHHHHHHHH------------CCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR------------LGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak------------~G~~V~VLEa~~r 81 (722)
.+||+|||||++||+||..|++ .|++|+|+|+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 3899999999999999999999 9999999999653
No 170
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.58 E-value=4.7e-05 Score=86.84 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHH---CCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~ 80 (722)
.+||||||||++|++||+.|++ .|++|+|+|+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4899999999999999999999 999999999965
No 171
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.57 E-value=3.4e-05 Score=93.79 Aligned_cols=41 Identities=54% Similarity=0.766 Sum_probs=39.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~~ 87 (722)
.+||+|||||++||+||.+|++.|++|+|+|+++++||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 47899999999999999999999999999999999999887
No 172
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.55 E-value=3e-05 Score=86.37 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=38.0
Q ss_pred CCcEEEECccHHHHHHHHHHHH-C------CCcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-L------GFRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~------G~~V~VLEa~~r~GGr~~ 87 (722)
.+||+|||||++||+||..|++ . |++|+|+|+.+.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 3799999999999999999999 7 999999999999998774
No 173
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.54 E-value=4.2e-05 Score=84.91 Aligned_cols=36 Identities=25% Similarity=0.533 Sum_probs=34.3
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
+||+|||||++||+||++|++. |++|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 7999999999999999999998 89999999999877
No 174
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.54 E-value=4.3e-05 Score=87.78 Aligned_cols=37 Identities=32% Similarity=0.490 Sum_probs=33.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC-Ccc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK-RAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~-r~G 83 (722)
++||||||||++|++||+.|++.|.+|+|+|++. .+|
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 4999999999999999999999999999999974 444
No 175
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.54 E-value=4.3e-05 Score=84.20 Aligned_cols=38 Identities=32% Similarity=0.506 Sum_probs=35.4
Q ss_pred CcEEEECccHHHHHHHHHHHH--CCCcEEEEecCCCccee
Q 004948 48 LRVLVIGAGLAGLAAARQLMR--LGFRVTVLEGRKRAGGR 85 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak--~G~~V~VLEa~~r~GGr 85 (722)
+||+|||||++||+||++|++ .|++|+|+|+++..++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 789999999999999999999 78999999999988764
No 176
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.54 E-value=4.8e-05 Score=84.34 Aligned_cols=37 Identities=35% Similarity=0.602 Sum_probs=34.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
++||+|||||++||+||+.|++. |++|+|+|+++.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 38999999999999999999998 78999999988665
No 177
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.54 E-value=6e-05 Score=82.31 Aligned_cols=37 Identities=30% Similarity=0.440 Sum_probs=34.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecCCCcce
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAGG 84 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~GG 84 (722)
+||+|||||++||+||+.|++.|+ +|+|+|+++.++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 40 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY 40 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC
Confidence 689999999999999999999998 8999999986653
No 178
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.53 E-value=3.7e-05 Score=85.88 Aligned_cols=36 Identities=36% Similarity=0.418 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
+||+|||||++||+||+.|++. |++|+|+|+++.++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 7999999999999999999998 89999999998765
No 179
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.52 E-value=5e-05 Score=87.23 Aligned_cols=38 Identities=21% Similarity=0.335 Sum_probs=35.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
.++||+|||||++||+||++|++. |++|+|+|+++.+|
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 458999999999999999999998 89999999999876
No 180
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.52 E-value=4.8e-05 Score=86.14 Aligned_cols=39 Identities=41% Similarity=0.624 Sum_probs=34.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcceee
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRV 86 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GGr~ 86 (722)
..+||+|||||++||+||++|++.|++|+|+|+ ++||.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~ 249 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQV 249 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGG
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcc
Confidence 358999999999999999999999999999986 577754
No 181
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.51 E-value=4.3e-05 Score=85.18 Aligned_cols=41 Identities=27% Similarity=0.374 Sum_probs=37.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEecCCCcceeee
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKRAGGRVY 87 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r~GGr~~ 87 (722)
.+||+|||||++|++||..|++.| ++|+|||+.+.+||.++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 489999999999999999999998 99999999999998663
No 182
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.51 E-value=4.7e-05 Score=88.50 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHC------CCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL------GFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~------G~~V~VLEa~~r~G 83 (722)
++||+|||||+|||+||+.|+++ |.+|+|||+....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 48999999999999999999997 99999999976543
No 183
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.51 E-value=5.6e-05 Score=82.83 Aligned_cols=38 Identities=32% Similarity=0.434 Sum_probs=35.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc--EEEEecCCCcce
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFR--VTVLEGRKRAGG 84 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~--V~VLEa~~r~GG 84 (722)
++||+|||||++||+||+.|++.|++ |+|+|+++.++.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 48 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY 48 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc
Confidence 48999999999999999999999987 999999987654
No 184
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.47 E-value=6.3e-05 Score=87.42 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=32.6
Q ss_pred CCcEEEECccHHHHHHHHHHH---H-CCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLM---R-LGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~La---k-~G~~V~VLEa~~r 81 (722)
.+||+|||||+|||+||+.|+ + .|.+|+|+|+...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 489999999999999999999 6 8999999999875
No 185
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.46 E-value=6.4e-05 Score=84.16 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=33.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
++||+|||||++|++||+.|++. |.+|+|+|+++.+|
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 47999999999999999999996 89999999987654
No 186
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.46 E-value=6.8e-05 Score=86.36 Aligned_cols=33 Identities=33% Similarity=0.583 Sum_probs=31.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEec
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (722)
..+||+|||||+|||+||.+|++.|++|+|+|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 358999999999999999999999999999998
No 187
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.39 E-value=7.3e-05 Score=84.86 Aligned_cols=33 Identities=33% Similarity=0.504 Sum_probs=31.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
|||+|||||.+|++||.++++.|.+|+|+|+..
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 899999999999999999999999999999743
No 188
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.38 E-value=9e-05 Score=84.56 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=34.0
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
+||+|||||++||+||++|++. |++|+|+|+++.+|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 6899999999999999999998 78999999999876
No 189
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.38 E-value=0.00012 Score=80.06 Aligned_cols=37 Identities=24% Similarity=0.472 Sum_probs=34.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCc--EEEEecCCCcce
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFR--VTVLEGRKRAGG 84 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~--V~VLEa~~r~GG 84 (722)
++|+|||||++||+||+.|++.|++ |+|+|+++.++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 6899999999999999999999987 999999987764
No 190
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.38 E-value=9.7e-05 Score=81.92 Aligned_cols=36 Identities=28% Similarity=0.339 Sum_probs=33.3
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
+||+|||||++|++||+.|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 5899999999999999999998 99999999987654
No 191
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.36 E-value=0.0001 Score=85.94 Aligned_cols=36 Identities=39% Similarity=0.590 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHH-----CCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-----LGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-----~G~~V~VLEa~~r~ 82 (722)
++||+|||||++||++|..|++ .|++|+|||+.+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 3899999999999999999999 99999999997643
No 192
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.35 E-value=0.00011 Score=81.39 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
+||+|||||++||+||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999998 89999999988654
No 193
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.35 E-value=0.00054 Score=74.13 Aligned_cols=41 Identities=17% Similarity=0.308 Sum_probs=35.8
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCCh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~ 295 (722)
.+++|+++++|++|..+++++.|++ +|+++.+|.||+|++.
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 3678999999999998877888887 8889999999999874
No 194
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.33 E-value=0.00011 Score=82.72 Aligned_cols=38 Identities=32% Similarity=0.458 Sum_probs=34.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCcc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRAG 83 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~G 83 (722)
.++||+|||||+||++||+.|++. |.+|+|+|+++.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 348999999999999999999887 88999999998765
No 195
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.31 E-value=0.00014 Score=82.69 Aligned_cols=37 Identities=30% Similarity=0.472 Sum_probs=33.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
..+||||||||.+|+++|++|+++|++|+|||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3599999999999999999999999999999997643
No 196
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.29 E-value=0.00014 Score=79.02 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=34.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
++++|+|||||+||++||..|...+.+|+|+|+++.++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 34899999999999999999977789999999988654
No 197
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.28 E-value=0.00017 Score=78.84 Aligned_cols=36 Identities=33% Similarity=0.544 Sum_probs=32.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~ 82 (722)
++||+|||||++|++||+.|++.|+ +|+|+|+++.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 4899999999999999999999998 49999997654
No 198
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.26 E-value=0.0002 Score=77.50 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC--CcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~ 80 (722)
++||+|||||++||+||+.|++.| .+|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 489999999999999999999999 4699999865
No 199
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.26 E-value=0.00013 Score=82.53 Aligned_cols=35 Identities=26% Similarity=0.416 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r 81 (722)
+||+||||||.||+..|.+|++ .|++|+|||+..+
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5999999999999999999998 5789999999543
No 200
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.25 E-value=0.0002 Score=78.89 Aligned_cols=37 Identities=24% Similarity=0.419 Sum_probs=33.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~G 83 (722)
.+||+|||||++||+||..|++.|+ +|+|+|+++.++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 3899999999999999999999998 799999987643
No 201
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.21 E-value=0.0018 Score=71.62 Aligned_cols=42 Identities=26% Similarity=0.312 Sum_probs=36.5
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~ 296 (722)
.+++|+++++|++|..+++++.+.+ +++++.+|.||+|+...
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 4788999999999998888888877 78899999999999753
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.20 E-value=0.00016 Score=81.06 Aligned_cols=37 Identities=19% Similarity=0.336 Sum_probs=33.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC---CcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG---FRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G---~~V~VLEa~~r~G 83 (722)
++||+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 389999999999999999999988 9999999987654
No 203
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.19 E-value=0.00018 Score=79.39 Aligned_cols=35 Identities=29% Similarity=0.540 Sum_probs=32.7
Q ss_pred CCcEEEECccHHHHHHHHHHHH---CCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR---LGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak---~G~~V~VLEa~~r 81 (722)
++||+|||||++||+||+.|++ .|++|+|+|+++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 4799999999999999999999 8999999999874
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.13 E-value=0.00023 Score=76.72 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=31.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.||+|||||+||++||..|++.| +|+|+|+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 78999999999999999999999 9999999764
No 205
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.11 E-value=0.00026 Score=78.24 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~r~G 83 (722)
++|||||||.||++||..|++.|. +|+|+|+++.++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS 38 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 469999999999999999999884 699999987543
No 206
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.11 E-value=0.0013 Score=73.09 Aligned_cols=35 Identities=40% Similarity=0.547 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 68999999999999999999999999999997754
No 207
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.09 E-value=0.00019 Score=81.60 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|+||||||.||+++|.+|++ |.+|+|||+....+
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 4999999999999999999999 99999999976654
No 208
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.03 E-value=0.002 Score=71.25 Aligned_cols=35 Identities=29% Similarity=0.399 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 67999999999999999999999999999997653
No 209
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.02 E-value=0.00039 Score=78.25 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=34.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|++|||||.+|+++|++|++.|++|+|+|+..+.+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999987655
No 210
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.00 E-value=0.0039 Score=69.21 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=35.4
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCE-EEEeCEEEEcCCh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQ-VFEGDMVLCTVPL 295 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~-~~~AD~VI~AvP~ 295 (722)
.+++|+++++|++|..+++++.|++ +|+ ++.+|.||+|+..
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 4788999999999998777778877 787 8999999999874
No 211
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.00 E-value=0.00036 Score=79.81 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=32.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC-CcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~r 81 (722)
.+|+||||||.||+++|..|++.| .+|+||||...
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 499999999999999999999998 79999999764
No 212
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.99 E-value=0.00035 Score=78.61 Aligned_cols=36 Identities=19% Similarity=0.462 Sum_probs=33.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
++++|||||||++|++||..|.+.+++|+|+|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 348999999999999999999999999999999874
No 213
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.98 E-value=0.0004 Score=75.47 Aligned_cols=34 Identities=29% Similarity=0.493 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--CcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r 81 (722)
++|||||||.||++||.+|++.| .+|+|+|+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 68999999999999999999876 48999999875
No 214
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.94 E-value=0.00059 Score=76.87 Aligned_cols=37 Identities=30% Similarity=0.496 Sum_probs=33.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.++|++|||||.+|+++|++|++.|.+|+|+|+....
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4599999999999999999999999999999997643
No 215
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.88 E-value=0.00056 Score=75.32 Aligned_cols=34 Identities=35% Similarity=0.602 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--CcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~r 81 (722)
++|||||||+|||+||++|++.+ ++|+|+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 57999999999999999999876 78999999875
No 216
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.85 E-value=0.00045 Score=79.03 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=32.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHC-CCcEEEEecCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRK 80 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~ 80 (722)
+.+|+||||||.||+++|.+|++. |.+|+||||..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 359999999999999999999985 79999999976
No 217
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.82 E-value=0.0044 Score=69.37 Aligned_cols=35 Identities=34% Similarity=0.489 Sum_probs=32.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 68999999999999999999999999999998764
No 218
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.82 E-value=0.0041 Score=69.17 Aligned_cols=36 Identities=39% Similarity=0.613 Sum_probs=33.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 679999999999999999999999999999987653
No 219
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.0092 Score=66.46 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=32.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 67999999999999999999999999999997653
No 220
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.70 E-value=0.0031 Score=68.76 Aligned_cols=42 Identities=21% Similarity=0.114 Sum_probs=35.1
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~ 296 (722)
.|++|+++++|++|..++....|++ +|+++.||.||++++..
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 4789999999999987664456777 88999999999999753
No 221
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.69 E-value=0.0011 Score=75.92 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=33.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHH-CCCcEEEEecCCCc
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKRA 82 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r~ 82 (722)
..+|+||||||.+|+++|++|++ .|++|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45999999999999999999999 79999999997644
No 222
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.67 E-value=0.0036 Score=68.29 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=35.1
Q ss_pred HcCCcccCceEEEEEecCCcE-EEEE-CCEEEEeCEEEEcCCh
Q 004948 255 ENVPILYEKTVHTIRYGSDGV-QVLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v-~V~~-~G~~~~AD~VI~AvP~ 295 (722)
.|++|+++++|++|..+++++ .|.+ +|+++.||.||+++..
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 378899999999999887776 4666 8889999999999974
No 223
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.66 E-value=0.011 Score=66.14 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=36.1
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~ 296 (722)
.|++|+++++|++|..+++++.|.. +|+++.+|.||+|+...
T Consensus 236 ~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 236 RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 3688999999999998877788877 78899999999999743
No 224
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.63 E-value=0.012 Score=65.63 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=36.6
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCCh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~ 295 (722)
.|++|+++++|++|..+++++.|++ +|+++.||.||+|++.
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 3788999999999999888888888 7889999999999984
No 225
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.63 E-value=0.00061 Score=77.67 Aligned_cols=36 Identities=33% Similarity=0.403 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHH-CCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMR-LGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa~~r~ 82 (722)
.+|+||||||.||+++|.+|++ .|.+|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3899999999999999999999 68999999997654
No 226
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.63 E-value=0.00089 Score=76.15 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~r~ 82 (722)
.+|++|||||.+|+++|++|+++ |.+|+|||+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 49999999999999999999998 8999999997654
No 227
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.54 E-value=0.0059 Score=67.43 Aligned_cols=41 Identities=22% Similarity=0.277 Sum_probs=34.7
Q ss_pred HcCCcccCceEEEEEecCCcEEEEECCEEEEeCEEEEcCCh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPL 295 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~ 295 (722)
.|++|+++++|++|...++++.|.++++++.||.||+|++.
T Consensus 202 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 202 QAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFALNL 242 (452)
T ss_dssp TTEEEEETCCEEEEEECSSCEEEEESSCEEEESEEEECSCC
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEECCCEEEeCEEEECcCC
Confidence 46789999999999988888877774449999999999984
No 228
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.54 E-value=0.0044 Score=67.39 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=34.5
Q ss_pred cCCcccCceEEEEEecCCcEE-EEE-CCEEEEeCEEEEcCCh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQ-VLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~-V~~-~G~~~~AD~VI~AvP~ 295 (722)
|++|+++++|++|..+++++. |.+ +|+++.||.||+|+..
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 788999999999998777764 666 8889999999999975
No 229
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.52 E-value=0.00051 Score=77.30 Aligned_cols=40 Identities=20% Similarity=0.037 Sum_probs=31.6
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcce
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGG 84 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~GG 84 (722)
.+-+||||||||++||++|+.|.++|...+++|+.+..|+
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 3458999999999999999999999888888888777665
No 230
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.50 E-value=0.0093 Score=66.13 Aligned_cols=42 Identities=10% Similarity=0.091 Sum_probs=35.5
Q ss_pred HcCCcccCceEEEEEecCCcEEEEECCEEEEeCEEEEcCChh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~~G~~~~AD~VI~AvP~~ 296 (722)
.|++|+++++|++|..+++.+.|.++++++.+|.||+|+...
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTTHGELRADKLLVATGRT 270 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEETTEEEEESEEEECSCEE
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEECCcEEEcCEEEECCCCC
Confidence 378899999999999877767777777899999999999753
No 231
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.47 E-value=0.015 Score=65.66 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 68999999999999999999999999999997653
No 232
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.42 E-value=0.016 Score=64.20 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=35.6
Q ss_pred cCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCCh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~ 295 (722)
+++|+++++|++|..++++++|++ +|+++.||.||+|+..
T Consensus 216 GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 216 DVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred CCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 788999999999998778888777 8889999999999984
No 233
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.35 E-value=0.019 Score=64.22 Aligned_cols=41 Identities=12% Similarity=0.272 Sum_probs=34.5
Q ss_pred HcCCcccCceEEEEEecCC-cEEEEE-CCEEEEeCEEEEcCCh
Q 004948 255 ENVPILYEKTVHTIRYGSD-GVQVLA-GSQVFEGDMVLCTVPL 295 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~-~v~V~~-~G~~~~AD~VI~AvP~ 295 (722)
.|++|+++++|++|..+++ .+.|++ +|+++.+|.||+|+..
T Consensus 248 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 248 NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 4788999999999998754 477777 7889999999999874
No 234
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.16 E-value=0.033 Score=61.77 Aligned_cols=35 Identities=43% Similarity=0.539 Sum_probs=32.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 57999999999999999999999999999997643
No 235
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.93 E-value=0.019 Score=64.24 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=35.9
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChh
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~ 296 (722)
.|++|+++++|++|..+++++.|++ +|+++.||.||++++..
T Consensus 239 ~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 239 EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred cCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 3688999999999988777777777 88899999999999753
No 236
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.37 E-value=0.083 Score=59.70 Aligned_cols=40 Identities=15% Similarity=-0.016 Sum_probs=35.9
Q ss_pred HcCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCC
Q 004948 255 ENVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVP 294 (722)
Q Consensus 255 ~~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP 294 (722)
+++.+++++.|+++...++++.|.+ ++.++.+|.|++|+.
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 3678999999999999999999888 788899999999986
No 237
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.30 E-value=0.013 Score=64.46 Aligned_cols=37 Identities=35% Similarity=0.488 Sum_probs=34.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l 185 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPL 185 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccc
Confidence 4789999999999999999999999999999987653
No 238
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.14 E-value=0.013 Score=63.42 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=33.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 579999999999999999999999999999988654
No 239
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.00 E-value=0.016 Score=60.12 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=32.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 58999999999999999999999999999997653
No 240
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.77 E-value=0.042 Score=50.07 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+.+|+|||+|-.|...|..|.+.|++|+++|.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3679999999999999999999999999999965
No 241
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.60 E-value=0.022 Score=63.03 Aligned_cols=35 Identities=34% Similarity=0.611 Sum_probs=32.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 67999999999999999999999999999998765
No 242
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.49 E-value=0.036 Score=49.80 Aligned_cols=33 Identities=21% Similarity=0.473 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 689999999999999999999999999999854
No 243
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.46 E-value=0.03 Score=61.76 Aligned_cols=36 Identities=31% Similarity=0.548 Sum_probs=33.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 368999999999999999999999999999998754
No 244
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.36 E-value=0.043 Score=50.92 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|+|||+|..|+..|..|.+.|++|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3789999999999999999999999999999864
No 245
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.33 E-value=0.03 Score=59.94 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 67999999999999999999999999999998754
No 246
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.16 E-value=0.053 Score=49.23 Aligned_cols=33 Identities=30% Similarity=0.486 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|+|+|-.|...|..|.+.|++|+++|.+.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 679999999999999999999999999999864
No 247
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.10 E-value=0.034 Score=57.44 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 3679999999999999999999999999999754
No 248
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.95 E-value=0.045 Score=59.44 Aligned_cols=37 Identities=30% Similarity=0.513 Sum_probs=33.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 181 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM 181 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 3789999999999999999999999999999987653
No 249
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.83 E-value=0.053 Score=47.09 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-CcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~ 80 (722)
++|+|+|+|..|...|..|.+.| ++|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 67999999999999999999999 8999999854
No 250
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.57 E-value=0.05 Score=59.86 Aligned_cols=35 Identities=29% Similarity=0.517 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
++|.|||.|.+|+++|..|++.|++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 67999999999999999999999999999997654
No 251
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.48 E-value=0.052 Score=59.90 Aligned_cols=34 Identities=47% Similarity=0.623 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|.|||.|.+|+++|..|.+.|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3789999999999999999999999999999865
No 252
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.47 E-value=0.046 Score=60.73 Aligned_cols=37 Identities=32% Similarity=0.543 Sum_probs=33.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 222 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG 222 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh
Confidence 3789999999999999999999999999999977543
No 253
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.41 E-value=0.067 Score=59.58 Aligned_cols=35 Identities=31% Similarity=0.471 Sum_probs=32.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 67999999999999999999999999999998754
No 254
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.22 E-value=0.065 Score=59.32 Aligned_cols=36 Identities=36% Similarity=0.505 Sum_probs=33.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 214 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG 214 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC
Confidence 579999999999999999999999999999987653
No 255
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.16 E-value=0.06 Score=59.82 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGL 220 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 68999999999999999999999999999998754
No 256
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.06 E-value=0.11 Score=47.85 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 679999999999999999999999999999963
No 257
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.06 E-value=0.072 Score=58.81 Aligned_cols=35 Identities=31% Similarity=0.445 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 68999999999999999999999999999998754
No 258
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.04 E-value=0.089 Score=54.58 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..+|+|||+|..|.+.|..|+++|++|++++.+
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 367999999999999999999999999999985
No 259
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.04 E-value=0.088 Score=47.36 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 569999999999999999999999999999753
No 260
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.02 E-value=0.075 Score=58.16 Aligned_cols=35 Identities=34% Similarity=0.578 Sum_probs=32.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 68999999999999999999999999999997654
No 261
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.90 E-value=0.078 Score=56.06 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-+|..|++.|.+|+++|+.++
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 5899999999999999999999999999999764
No 262
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.83 E-value=0.081 Score=58.03 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=32.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 57999999999999999999999999999998764
No 263
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.77 E-value=0.097 Score=57.47 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 58999999999999999999999999999998754
No 264
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.66 E-value=0.094 Score=54.02 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|++++++++
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 6899999999999999999999999999998764
No 265
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.61 E-value=0.099 Score=54.79 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||||..|-.-|..++.+|++|+|+|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 679999999999999999999999999999853
No 266
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.60 E-value=0.1 Score=49.55 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHC-CCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL-GFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~-G~~V~VLEa~~ 80 (722)
..+|+|||+|..|...|..|.+. |++|+++|.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 36799999999999999999999 99999999864
No 267
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.45 E-value=0.066 Score=59.18 Aligned_cols=36 Identities=36% Similarity=0.469 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 367999999999999999999999999999998754
No 268
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.36 E-value=0.094 Score=58.55 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=33.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 368999999999999999999999999999998764
No 269
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.20 E-value=0.11 Score=57.16 Aligned_cols=35 Identities=23% Similarity=0.519 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch
Confidence 67999999999999999999999999999997754
No 270
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.16 E-value=0.13 Score=50.49 Aligned_cols=33 Identities=18% Similarity=0.471 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 271
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.16 E-value=0.11 Score=57.33 Aligned_cols=35 Identities=40% Similarity=0.543 Sum_probs=32.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 67999999999999999999999999999998764
No 272
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.05 E-value=0.11 Score=53.46 Aligned_cols=34 Identities=41% Similarity=0.428 Sum_probs=31.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 5799999999999999999999999999998764
No 273
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.73 E-value=0.13 Score=56.76 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=32.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
..+|+|||+|.+|+=.|..|++.|.+|+|+++++++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 367999999999999999999999999999987653
No 274
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.72 E-value=0.12 Score=53.77 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|+|++++++
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 6799999999999999999999999999999764
No 275
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.65 E-value=0.14 Score=53.34 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
+.++|+|||||-.|.+.|+.|++.|+ +|++++.+.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34789999999999999999999998 999999864
No 276
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.54 E-value=0.15 Score=57.75 Aligned_cols=35 Identities=31% Similarity=0.519 Sum_probs=32.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 58999999999999999999999999999997653
No 277
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.53 E-value=0.13 Score=58.12 Aligned_cols=35 Identities=29% Similarity=0.237 Sum_probs=32.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
..+|+|||+|.+|+-.|..|++.|.+|+|++++++
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999875
No 278
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.46 E-value=0.16 Score=53.28 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.|||+|.-|.+-|..|+++|++|++++.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 679999999999999999999999999999853
No 279
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.46 E-value=0.16 Score=52.10 Aligned_cols=33 Identities=33% Similarity=0.381 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|.-|...|..|+++|++|++++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 679999999999999999999999999998853
No 280
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.43 E-value=0.14 Score=53.55 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|++++++++
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 6899999999999999999999999999998764
No 281
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.38 E-value=0.13 Score=57.25 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=32.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-.|..|++.|.+|+|+|+.+++
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 57999999999999999999999999999998764
No 282
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.35 E-value=0.15 Score=56.36 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=32.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-.|..|++.|.+|+|+|+.+++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 68999999999999999999999999999997754
No 283
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.35 E-value=0.14 Score=53.08 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=31.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 5799999999999999999999999999998664
No 284
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=91.32 E-value=0.14 Score=52.82 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 6799999999999999999999999999998764
No 285
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.26 E-value=0.16 Score=56.08 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=32.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-.|..|++.|.+|+|+|+.+++
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 67999999999999999999999999999997754
No 286
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.25 E-value=0.18 Score=54.45 Aligned_cols=33 Identities=39% Similarity=0.596 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 789999999999999999999999999999864
No 287
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.18 E-value=0.19 Score=52.88 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHH-HHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLA-AARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLs-AA~~Lak~G~~V~VLEa~~r 81 (722)
.++|.|||.|-+|++ +|..|.+.|++|++.|.++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 368999999999997 78899999999999998653
No 288
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.14 E-value=0.17 Score=57.19 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
..+|+|||+|.+|+-.|..|++.|.+|+|++++++
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 47899999999999999999999999999999875
No 289
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.11 E-value=0.18 Score=52.80 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|.-|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 290
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.09 E-value=0.26 Score=54.25 Aligned_cols=35 Identities=23% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
..+|+|||+|..|...|..|+++|++|+++|.+..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 46799999999999999999999999999998754
No 291
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.09 E-value=0.13 Score=52.55 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
...|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3789999999999999999999999999998753
No 292
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.97 E-value=0.2 Score=51.15 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
++|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 3699999999999999999999999999998653
No 293
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.91 E-value=0.19 Score=52.07 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+++|.|||+|..|-.-|..|+ +|++|++++.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 488999999999999999999 999999999854
No 294
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.87 E-value=0.14 Score=53.22 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|++++++++
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 6899999999999999999999999999999764
No 295
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.83 E-value=0.16 Score=57.44 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=32.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
..+|+|||+|.+|+-+|..|++.|.+|+|++++++
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999875
No 296
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.78 E-value=0.23 Score=48.57 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.++|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 37899999999999999999999999999998764
No 297
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.77 E-value=0.19 Score=51.86 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|.|||+|..|.+.|..|+++|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 68999999999999999999999999999874
No 298
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.76 E-value=0.18 Score=55.18 Aligned_cols=36 Identities=17% Similarity=0.072 Sum_probs=32.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCc-EEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFR-VTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~-V~VLEa~~r~ 82 (722)
..+|+|||+|.+|+=.|..|++.|.+ |+|+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 36799999999999999999999999 9999997653
No 299
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.75 E-value=0.2 Score=49.67 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|+|||||-.|...|..|.+.|.+|+|++...
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3789999999999999999999999999998643
No 300
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.75 E-value=0.17 Score=52.43 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 6799999999999999999999999999998764
No 301
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.59 E-value=0.22 Score=51.78 Aligned_cols=35 Identities=31% Similarity=0.518 Sum_probs=32.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++++|.|||.|..|...|..|+++|++|++++++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45789999999999999999999999999998864
No 302
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.55 E-value=0.2 Score=55.59 Aligned_cols=34 Identities=26% Similarity=0.488 Sum_probs=31.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|+|||+|.-|+..|..|+++|++|++++.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3889999999999999999999999999998753
No 303
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.51 E-value=0.14 Score=56.29 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=32.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~r~ 82 (722)
..+|+|||||.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 36899999999999999999999 8899999997653
No 304
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.51 E-value=0.37 Score=51.70 Aligned_cols=39 Identities=33% Similarity=0.530 Sum_probs=34.1
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCC---cEEEEecCC-Cccee
Q 004948 47 KLRVLVIGA-GLAGLAAARQLMRLGF---RVTVLEGRK-RAGGR 85 (722)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~---~V~VLEa~~-r~GGr 85 (722)
..+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 378999999 9999999999999998 999999865 44665
No 305
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=90.49 E-value=0.18 Score=56.04 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=32.6
Q ss_pred CcEEEECccHHHHHHHHHHHHC---CCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL---GFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~---G~~V~VLEa~~r~ 82 (722)
.+|+|||||..|+-.|..|.+. |.+|+|+|+.+++
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 6899999999999999999999 9999999998754
No 306
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.44 E-value=0.19 Score=52.46 Aligned_cols=33 Identities=39% Similarity=0.517 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|--|.+-|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 679999999999999999999999999999864
No 307
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.39 E-value=0.25 Score=52.08 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
+++|+|||||-.|.+.|..|+..|+ +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3789999999999999999999998 999999864
No 308
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.38 E-value=0.17 Score=52.36 Aligned_cols=34 Identities=32% Similarity=0.375 Sum_probs=31.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 5799999999999999999999999999998653
No 309
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.28 E-value=0.19 Score=53.75 Aligned_cols=33 Identities=39% Similarity=0.538 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789999999999999999999999999999864
No 310
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.08 E-value=0.25 Score=56.28 Aligned_cols=35 Identities=29% Similarity=0.461 Sum_probs=32.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 67999999999999999999999999999997754
No 311
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.86 E-value=0.27 Score=56.07 Aligned_cols=32 Identities=41% Similarity=0.420 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999985
No 312
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.86 E-value=0.32 Score=53.74 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|.|||+|..|...|..|+++|++|+++|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3679999999999999999999999999998853
No 313
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=89.85 E-value=5.7 Score=44.98 Aligned_cols=37 Identities=14% Similarity=-0.028 Sum_probs=30.7
Q ss_pred CcEEEccccccccc---CccchHHHHHHHHHHHHHHHHHh
Q 004948 454 GRLFFAGEATIRRY---PATMHGAFLSGLRETAKMAHCAN 490 (722)
Q Consensus 454 ~~L~fAGd~ts~~~---~g~~eGAi~SG~~AA~~Il~~l~ 490 (722)
+|++++||+.+.-. ..+++-|+.+|..+|+.|...+.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 79999999987422 24899999999999999988763
No 314
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.81 E-value=0.29 Score=51.55 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|+|||+|--|.+.|..|+++|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 68999999999999999999999999999874
No 315
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=89.59 E-value=8.5 Score=44.03 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=30.1
Q ss_pred CCcEEEcccccccccC---ccchHHHHHHHHHHHHHHHHHh
Q 004948 453 DGRLFFAGEATIRRYP---ATMHGAFLSGLRETAKMAHCAN 490 (722)
Q Consensus 453 ~~~L~fAGd~ts~~~~---g~~eGAi~SG~~AA~~Il~~l~ 490 (722)
.+|++++||+.+...| .+|+-|++.+...|..+...+.
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~ 381 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLR 381 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHc
Confidence 3899999999985322 3899999999988888776654
No 316
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.58 E-value=0.32 Score=53.63 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=33.1
Q ss_pred CcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhhh
Q 004948 454 GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARA 493 (722)
Q Consensus 454 ~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~~ 493 (722)
++||.+||.... +..+.-|+..|..||..|...+.++.
T Consensus 410 ~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 410 DGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp TTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 799999999863 56788999999999999999987654
No 317
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=89.48 E-value=0.22 Score=52.58 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=31.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-.|..|++.|.+|+++++.++
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE 197 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC
Confidence 6799999999999999999999999999998764
No 318
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.42 E-value=0.31 Score=49.88 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=32.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
.+|+|||+|.+|+-+|..|.+.|.+|+++++.+++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 67999999999999999999999999999987643
No 319
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.42 E-value=0.28 Score=50.41 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=31.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-+|..|.+.|.+|+++++.++
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 6799999999999999999999999999999764
No 320
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.39 E-value=0.3 Score=51.06 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
.++|+|||||..|.+.|..|+++|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4789999999999999999999998 999999864
No 321
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.38 E-value=0.28 Score=52.54 Aligned_cols=33 Identities=36% Similarity=0.622 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|+|||.+|..+|..|...|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 3789999999999999999999998 89999996
No 322
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.35 E-value=0.22 Score=55.85 Aligned_cols=34 Identities=41% Similarity=0.428 Sum_probs=31.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 6899999999999999999999999999998654
No 323
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.23 E-value=0.31 Score=50.95 Aligned_cols=32 Identities=31% Similarity=0.544 Sum_probs=29.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.++|+|||+|--|.+.|..|+++|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 378999999999999999999999999999 64
No 324
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.23 E-value=0.29 Score=53.89 Aligned_cols=33 Identities=30% Similarity=0.571 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|..|+..|..|+++|++|++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999864
No 325
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.14 E-value=0.26 Score=50.87 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|--|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 689999999999999999999999999999863
No 326
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.03 E-value=0.3 Score=54.13 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=32.1
Q ss_pred CcEEEECccHHHHHHHHHHHHC-CC-cEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL-GF-RVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~-G~-~V~VLEa~~r 81 (722)
++|+|||+|.-|+..|..|+++ |+ +|++++.+..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 7899999999999999999999 99 9999998764
No 327
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.02 E-value=0.38 Score=48.19 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=31.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||+|.-|.+.|..|+++|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4789999999999999999999999999998854
No 328
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.85 E-value=0.34 Score=51.09 Aligned_cols=32 Identities=28% Similarity=0.192 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|+|||+|..|...|..|+++|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999875
No 329
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.77 E-value=0.34 Score=49.65 Aligned_cols=33 Identities=30% Similarity=0.477 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 679999999999999999999999999998864
No 330
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.72 E-value=0.37 Score=49.90 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 789999999999999999999999999998753
No 331
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.69 E-value=0.37 Score=51.30 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|+|||+|.-|.+.|..|+++|++|++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3789999999999999999999999999998853
No 332
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.56 E-value=0.34 Score=51.72 Aligned_cols=33 Identities=30% Similarity=0.586 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|+|||-+|..+|..|...|. +|+|++++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3789999999999999999999998 79999996
No 333
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.52 E-value=0.37 Score=50.61 Aligned_cols=33 Identities=33% Similarity=0.442 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.++|.|||+|--|.+.|..|+++|++|++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 388999999999999999999999999999874
No 334
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.43 E-value=0.43 Score=50.14 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
.+|+|||||-.|.+.|+.|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 689999999999999999999998 999999864
No 335
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.41 E-value=0.41 Score=53.05 Aligned_cols=32 Identities=31% Similarity=0.429 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 57999999999999999999999999999974
No 336
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=88.27 E-value=0.4 Score=52.77 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=32.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCc
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRA 82 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~ 82 (722)
..+|+|||||..|+-.|..|++.|.+|+++|+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 367999999999999999999999999999997753
No 337
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=88.19 E-value=0.44 Score=53.33 Aligned_cols=32 Identities=34% Similarity=0.465 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|+|||||..|+-.|..|++.|.+|+|+|+.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 56999999999999999999999999999974
No 338
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.12 E-value=0.34 Score=49.96 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+++|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4789999999999999999999999999998753
No 339
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.08 E-value=0.45 Score=50.44 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+++|+|||||..|..+|+.+.+.|++|++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999999999999999999999999754
No 340
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.05 E-value=0.44 Score=52.88 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|..|...|..|+++|++|+++|.+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999753
No 341
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.99 E-value=0.41 Score=51.80 Aligned_cols=33 Identities=45% Similarity=0.623 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 679999999999999999999999999998854
No 342
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.95 E-value=0.3 Score=50.03 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||.|..|...|..|+++|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999998864
No 343
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.83 E-value=0.52 Score=46.16 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|+|||+|..|.+.|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3679999999999999999999999999998753
No 344
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.67 E-value=0.44 Score=49.47 Aligned_cols=32 Identities=41% Similarity=0.536 Sum_probs=29.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|--|.+.|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 78999999999999999999 999999999854
No 345
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.66 E-value=0.35 Score=49.91 Aligned_cols=34 Identities=29% Similarity=0.293 Sum_probs=31.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||.|..|...|..|+++|++|++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999865
No 346
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.65 E-value=0.22 Score=45.35 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|..|...|..|.+.|++|+|++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 789999999999999999999999999999753
No 347
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.59 E-value=0.49 Score=50.85 Aligned_cols=33 Identities=45% Similarity=0.585 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789999999999999999999999999999864
No 348
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.57 E-value=0.4 Score=50.08 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||.|..|...|..|+++|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4789999999999999999999999999998753
No 349
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.54 E-value=0.36 Score=52.86 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|..|+..|..|+++|++|++++.+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 369999999999999999999999999998753
No 350
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.54 E-value=0.46 Score=49.37 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
++|+|||||..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 899999853
No 351
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.52 E-value=0.53 Score=49.31 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=30.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
..+|+|||||-.|.+.|+.|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3689999999999999999999998 999999753
No 352
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.35 E-value=0.45 Score=51.92 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|+|||+|.-|+..|..|++ |++|++++.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3689999999999999999998 99999999854
No 353
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.32 E-value=0.54 Score=50.07 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|+|+|-+|+.+|..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999998853
No 354
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.27 E-value=0.38 Score=49.59 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|.+|+-+|..|++.|.+|+++++.++
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 6799999999999999999999999999998764
No 355
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=87.23 E-value=0.52 Score=51.74 Aligned_cols=34 Identities=26% Similarity=0.561 Sum_probs=31.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+++|||.|.-|+..|..|+++|++|++++.+..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6799999999999999999999999999998753
No 356
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.20 E-value=0.4 Score=50.10 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=29.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEec
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (722)
++|+|||+|..|.+.|..|+++|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999987
No 357
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.18 E-value=0.61 Score=48.67 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=30.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
++|.|||+|..|.+-|..|.++|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 689999999999999999999999 899998754
No 358
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.09 E-value=0.49 Score=51.74 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=31.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++.+|+|||.|.-||..|..|+++|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 35789999999999999999999999999998754
No 359
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=86.84 E-value=0.49 Score=52.16 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHH--------------------HCCC-cEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLM--------------------RLGF-RVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~La--------------------k~G~-~V~VLEa~~r 81 (722)
..+|+|||+|..|+-+|..|+ +.|. +|+|+++++.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 368999999999999999999 5687 6999998764
No 360
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.82 E-value=0.38 Score=47.33 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=29.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEE-EecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTV-LEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~V-LEa~ 79 (722)
++|.|||+|..|.+.|..|+++|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 6899999999999999999999999988 6653
No 361
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.73 E-value=0.61 Score=48.33 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||.|..|...|..|+++|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999998754
No 362
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.63 E-value=0.61 Score=47.50 Aligned_cols=32 Identities=38% Similarity=0.491 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..|+|+|+|-.|.++|+.|++.|.+|+|+.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 67999999999999999999999999999875
No 363
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.53 E-value=0.58 Score=49.81 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||.|..|...|..|+++|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999999999999998854
No 364
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.52 E-value=0.4 Score=48.58 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=31.8
Q ss_pred CcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhh
Q 004948 454 GRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (722)
Q Consensus 454 ~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (722)
++||.+||.+.. +.....|+..|..||..|.+.+...
T Consensus 258 ~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 258 RGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp TTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 799999998873 5688899999999999999887543
No 365
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.52 E-value=0.6 Score=54.55 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|.|||+|..|...|..|+++|++|+++|.+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999853
No 366
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.50 E-value=0.63 Score=50.54 Aligned_cols=34 Identities=29% Similarity=0.520 Sum_probs=31.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+.+|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3679999999999999999999999999999864
No 367
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.42 E-value=0.63 Score=51.42 Aligned_cols=32 Identities=41% Similarity=0.573 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|+|||||..|+-.|..|++.|.+|+|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 57999999999999999999999999999973
No 368
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.37 E-value=0.61 Score=45.16 Aligned_cols=32 Identities=34% Similarity=0.515 Sum_probs=29.3
Q ss_pred CcEEEEC-ccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIG-AGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVG-AGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|+||| +|..|...|..|.+.|++|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3699999 9999999999999999999999874
No 369
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=86.30 E-value=0.3 Score=54.00 Aligned_cols=34 Identities=21% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|+|+|+|--|...|..|.+.|++|+|+|.+.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4889999999999999999999999999999964
No 370
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.02 E-value=0.69 Score=49.36 Aligned_cols=33 Identities=30% Similarity=0.559 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|+|+|-.|+.+|..|...|.+|++++.+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 679999999999999999999999999998753
No 371
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.81 E-value=0.5 Score=52.24 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~ 80 (722)
.++|.|||+|..|+..|..|+++ |++|++++.+.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999999 89999998753
No 372
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.74 E-value=0.68 Score=48.16 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~ 80 (722)
++|+|||+|..|.+.|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999996 78999999864
No 373
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.74 E-value=0.59 Score=51.47 Aligned_cols=33 Identities=30% Similarity=0.320 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|||+|-.|+..|..|.+.|.+|+|++...
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 789999999999999999999999999999753
No 374
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.64 E-value=0.49 Score=51.21 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|..|+..|..|++ |++|++++.+.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 369999999999999999999 99999998753
No 375
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=85.54 E-value=0.56 Score=48.83 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
+++|.|||.|..|...|..|+++|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4789999999999999999999999 99999985
No 376
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.39 E-value=0.69 Score=48.27 Aligned_cols=33 Identities=30% Similarity=0.428 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 3689999999999999999999999 99999986
No 377
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.36 E-value=0.87 Score=47.18 Aligned_cols=33 Identities=27% Similarity=0.494 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999998754
No 378
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=85.20 E-value=0.82 Score=46.57 Aligned_cols=34 Identities=32% Similarity=0.455 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|+|||+|-+|-++|+.|++.|.+|+|+.++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999998864
No 379
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.17 E-value=0.61 Score=47.52 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|+|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 67999999999999999999999999999886
No 380
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.15 E-value=0.63 Score=48.59 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-CcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~~ 80 (722)
++|.|||.|..|.+.|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 67999999999999999999999 9999999853
No 381
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=85.07 E-value=1.5 Score=51.18 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=31.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
-.+|.|||||..|-.-|+.++.+|++|+++|.++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 4689999999999999999999999999999754
No 382
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.03 E-value=0.79 Score=47.66 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
++|+|||||-.|.+.|+.|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 689999999999999999999997 999999753
No 383
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.01 E-value=0.83 Score=47.87 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
..+|+|||||-.|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3789999999999999999999998 999999854
No 384
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.88 E-value=0.64 Score=51.56 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHC--CCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~~ 80 (722)
.++|+|||+|..|+..|..|+++ |++|++++.+.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 78999998753
No 385
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=84.76 E-value=0.64 Score=48.32 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.7
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|+|||+|.+|+-+|..|++.| +|++++++.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 368999999999999999999998 699998863
No 386
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.73 E-value=0.87 Score=48.78 Aligned_cols=34 Identities=47% Similarity=0.523 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..+|+|||+|..|+.+|..|...|.+|++++.+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999999999999999753
No 387
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=84.61 E-value=0.67 Score=54.23 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=31.2
Q ss_pred CcEEEEC--ccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIG--AGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVG--AGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+||| ||..|+-+|..|++.|.+|+|+|+.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 5899999 99999999999999999999999976
No 388
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.60 E-value=0.8 Score=47.33 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
.+|+|||+|-+|.++|+.|++.|. +|+|+.++
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 679999999999999999999998 89999875
No 389
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.53 E-value=0.82 Score=46.37 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=29.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|.|||+|..|.+.|..|.+.|++|++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999874
No 390
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=84.53 E-value=0.69 Score=46.44 Aligned_cols=32 Identities=25% Similarity=0.487 Sum_probs=29.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-CcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG-FRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-~~V~VLEa~ 79 (722)
++|.|||+|..|.+.|..|.++| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999875
No 391
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.48 E-value=0.85 Score=53.21 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
-.+|.|||+|..|...|..|+++|++|+++|.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3679999999999999999999999999999853
No 392
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.47 E-value=0.8 Score=47.86 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=30.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
+.+|+|||||-.|.+.|+.|+..|. +|.++|-.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4789999999999999999999997 89999975
No 393
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.40 E-value=1.1 Score=47.05 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=31.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
...+|+|||+|..|.+.|+.|+..|+ +|.++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 34789999999999999999999997 899999743
No 394
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.23 E-value=0.7 Score=48.29 Aligned_cols=32 Identities=22% Similarity=0.499 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
++|+|||+|-.|.+.|..|++.|+ +|++++.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 369999999999999999999999 99999985
No 395
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=84.18 E-value=0.92 Score=46.78 Aligned_cols=33 Identities=24% Similarity=0.490 Sum_probs=30.4
Q ss_pred CcEEEEC-ccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIG-AGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVG-AGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5799999 99999999999999999999998754
No 396
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.11 E-value=0.73 Score=47.80 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--CcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG--FRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--~~V~VLEa~~ 80 (722)
++|+|||+|-.|.+.|..|+++| .+|++++.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 57999999999999999999999 6899999853
No 397
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.05 E-value=0.76 Score=46.18 Aligned_cols=32 Identities=38% Similarity=0.517 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
.+|+|||+|-.|..+|..|++.|. +++|++..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 679999999999999999999998 79999984
No 398
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=84.01 E-value=0.49 Score=50.30 Aligned_cols=31 Identities=29% Similarity=0.289 Sum_probs=29.5
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
+|+|||+|.-|.+.|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999875
No 399
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=83.92 E-value=0.47 Score=57.44 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=33.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 579999999999999999999999999999988754
No 400
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.88 E-value=0.81 Score=46.83 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=29.6
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998753
No 401
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.82 E-value=0.58 Score=48.36 Aligned_cols=31 Identities=23% Similarity=0.305 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC-----C-CcEEEEec
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL-----G-FRVTVLEG 78 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~-----G-~~V~VLEa 78 (722)
++|.|||+|.-|.+.|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999976
No 402
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.81 E-value=0.97 Score=47.14 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=30.6
Q ss_pred CCCCcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 45 SNKLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 45 ~~~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+.+.|+|.|| |.-|...+..|.+.|++|+++.++..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34578999999 99999999999999999999988653
No 403
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.71 E-value=0.99 Score=45.86 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
++|.|||+|..|.+.|..|.+.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 579999999999999999999998 89988874
No 404
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.69 E-value=1 Score=46.48 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 789999999999999999999999999999864
No 405
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.65 E-value=0.95 Score=50.13 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+++|.|||.|..|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 406
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.54 E-value=0.81 Score=46.97 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=30.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
+++|.|||+|..|...|..|.+.|++|++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 368999999999999999999999999999874
No 407
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.50 E-value=0.68 Score=49.42 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-------CcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG-------FRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-------~~V~VLEa~~r 81 (722)
++|.|||+|.-|.+.|..|+++| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999999 99999988653
No 408
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.47 E-value=0.97 Score=46.16 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=29.9
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|.|||+ |..|.+.|..|.+.|++|++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 68999999 999999999999999999999874
No 409
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=83.29 E-value=0.79 Score=46.64 Aligned_cols=32 Identities=31% Similarity=0.376 Sum_probs=29.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||+|..|...|..|.+ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998753
No 410
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=83.24 E-value=0.98 Score=47.37 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
..+|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4789999999999999999999997 89999974
No 411
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.10 E-value=1.1 Score=45.97 Aligned_cols=33 Identities=33% Similarity=0.509 Sum_probs=31.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999999999999999864
No 412
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.10 E-value=1 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=30.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCC----CcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLG----FRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G----~~V~VLEa~~ 80 (722)
.++|.|||+|.-|.+-|..|.++| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 368999999999999999999999 7899998754
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.07 E-value=0.84 Score=46.79 Aligned_cols=32 Identities=25% Similarity=0.586 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|+|||+|..|...|..|.+.|++|++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 58999999999999999999999999999875
No 414
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=82.93 E-value=1.3 Score=44.75 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|.|+|.-|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 679999999999999999999999999998754
No 415
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=82.80 E-value=1.2 Score=46.67 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
.+|+|||+|..|.+.|+.|+..|+ +|.++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 689999999999999999999988 999999864
No 416
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=82.74 E-value=0.87 Score=51.20 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=32.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.++|+|||+|.+|+-.|..|++.|.+|+|+++++.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 36899999999999999999999999999998653
No 417
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=82.64 E-value=0.99 Score=45.23 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCC----CcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG----FRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G----~~V~VLEa~~r 81 (722)
++|.|||+|.-|.+-|..|.++| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 67999999999999999999999 79999988653
No 418
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.52 E-value=0.97 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
..+|+|||||..|-+.|+.|+..|+ +|.++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3789999999999999999999998 899999865
No 419
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=82.51 E-value=1.3 Score=44.14 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC----cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF----RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~----~V~VLEa~ 79 (722)
++|.|||+|..|.+-|..|.++|+ +|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 679999999999999999999998 99999885
No 420
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.49 E-value=1.3 Score=42.64 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=29.7
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999996 9999999999999999999998853
No 421
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.49 E-value=1.2 Score=43.72 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=31.2
Q ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 46 NKLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 46 ~~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+.++|+|.|| |.-|...|..|.+.|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3478999998 9999999999999999999998854
No 422
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=82.45 E-value=1.1 Score=49.73 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 423
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=82.37 E-value=0.93 Score=46.21 Aligned_cols=32 Identities=31% Similarity=0.387 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|+|||+|-.|-+.|+.|.+.|.+|+|++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 67999999999999999999999999999875
No 424
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=82.36 E-value=0.99 Score=50.02 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|.|||+|.-|.+-|..|+++|++|++++++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 78999999999999999999999999999875
No 425
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=82.25 E-value=0.69 Score=47.31 Aligned_cols=32 Identities=28% Similarity=0.425 Sum_probs=29.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||+|..|...|..|.+.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 689999999999999999999999999998 53
No 426
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=82.23 E-value=0.91 Score=52.71 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=33.0
Q ss_pred CcEEEEC--ccHHHHHHHHHHHHCCCcEEEEecCCCcc
Q 004948 48 LRVLVIG--AGLAGLAAARQLMRLGFRVTVLEGRKRAG 83 (722)
Q Consensus 48 ~dVvIVG--AGiAGLsAA~~Lak~G~~V~VLEa~~r~G 83 (722)
.+|+||| +|.+|+-+|..|++.|.+|++++..+++.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 5699999 99999999999999999999999987654
No 427
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=82.14 E-value=1.1 Score=49.61 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998854
No 428
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=82.04 E-value=0.99 Score=45.23 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=30.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
+++|.|||+|..|..-|..|.+.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 368999999999999999999999999998874
No 429
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=81.98 E-value=1 Score=49.45 Aligned_cols=35 Identities=34% Similarity=0.486 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHC--------------------CC-cEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--------------------GF-RVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--------------------G~-~V~VLEa~~r~ 82 (722)
.+|+|||+|.+|+-+|..|++. |. +|+|+++++.+
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 6799999999999999999974 64 89999987643
No 430
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=81.98 E-value=0.97 Score=55.04 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
.+|+|||||..|+-+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999876
No 431
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=81.91 E-value=1.4 Score=44.28 Aligned_cols=32 Identities=31% Similarity=0.442 Sum_probs=29.8
Q ss_pred cEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 49 RVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
+|+|||+|-+|-++++.|.+.|. +|+|+.++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899998853
No 432
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=81.84 E-value=1 Score=46.56 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
++|+|||||-.|.+.|+.|+..|+ +|+++|...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 899999754
No 433
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=81.83 E-value=0.68 Score=49.91 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=28.6
Q ss_pred CcEEEECccHHHHHHHHHHHH-CCCcEEEEec
Q 004948 48 LRVLVIGAGLAGLAAARQLMR-LGFRVTVLEG 78 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak-~G~~V~VLEa 78 (722)
++|+|||+|..|.+.|..|++ +|++|++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 579999999999999999998 5999999983
No 434
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=81.82 E-value=1.5 Score=45.99 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=30.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
...+|+|||||-.|.+.|+.|+..|+ ++.++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34789999999999999999999997 79999974
No 435
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.81 E-value=0.65 Score=48.98 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCC-------CcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG-------FRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G-------~~V~VLEa~~r 81 (722)
++|+|||+|.-|.+.|..|+++| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 57999999999999999999999 89999988653
No 436
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=81.62 E-value=0.44 Score=47.40 Aligned_cols=32 Identities=34% Similarity=0.436 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|.|||+|.-|-+-|..|.++|++|+++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 78999999999999999999999999998874
No 437
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=81.54 E-value=0.97 Score=46.24 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
.+|+|||+|-+|-++|+.|.+.|. +|+|+.++.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 679999999999999999999998 899998764
No 438
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=81.49 E-value=1.3 Score=46.72 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.|||.|.-|-+-|..|.++|++|++++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 679999999999999999999999999999754
No 439
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.26 E-value=1 Score=45.27 Aligned_cols=32 Identities=38% Similarity=0.553 Sum_probs=29.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCc-EEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFR-VTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~-V~VLEa~ 79 (722)
++|.|||+|..|...|..|++.|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 6799999999999999999999998 8898874
No 440
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=81.19 E-value=1.1 Score=45.05 Aligned_cols=31 Identities=32% Similarity=0.289 Sum_probs=28.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEec
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEG 78 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa 78 (722)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3699999999999999999999999998654
No 441
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.18 E-value=1.5 Score=42.42 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=29.4
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|+|.|| |..|...+..|.++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 36999998 999999999999999999999875
No 442
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.14 E-value=1.2 Score=49.36 Aligned_cols=32 Identities=31% Similarity=0.539 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
++|.|||+|..|...|..|+++|++|++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999875
No 443
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.08 E-value=1.3 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=30.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
...+|+|||+|..|.+.|+.|+..|. ++.++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34789999999999999999999987 79999974
No 444
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=81.00 E-value=1.2 Score=46.54 Aligned_cols=33 Identities=30% Similarity=0.478 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~~ 80 (722)
++|+|||+|..|.+.|+.|+..|. +|.++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999987 899999864
No 445
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=80.90 E-value=1.5 Score=45.74 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=29.2
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..+|+|||+| +.|-.+|..|...|..|+|.+++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3789999999 67999999999999999988653
No 446
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.77 E-value=1.2 Score=44.99 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.8
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|+|||.-|...+..|.++|++|+++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 789999999999999999999999999998754
No 447
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=80.70 E-value=1.6 Score=44.47 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=30.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC---cEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF---RVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~---~V~VLEa~~ 80 (722)
++|.|||+|.-|.+-|..|.++|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 679999999999999999999998 899998854
No 448
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=80.69 E-value=0.99 Score=46.61 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=28.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|.+||-|..|..-|..|.++|++|++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999754
No 449
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=80.66 E-value=1.5 Score=44.57 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+++|+|+|-+|-++|+.|++.|. +|+|+.++
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3789999999999999999999996 89999775
No 450
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.56 E-value=1.6 Score=44.03 Aligned_cols=32 Identities=41% Similarity=0.429 Sum_probs=29.9
Q ss_pred cEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 49 RVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 49 dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+|+|||+|-.|-+.|+.|.+.|++|+|++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998863
No 451
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=80.51 E-value=0.93 Score=50.51 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=29.4
Q ss_pred CcEEEECccHHHHHHHHHHHHCC--------------CcEEEEecCCCc
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLG--------------FRVTVLEGRKRA 82 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G--------------~~V~VLEa~~r~ 82 (722)
..++|||||.+|+-.|..|++.+ .+|+|+|+.+++
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 46999999999999999887542 579999998765
No 452
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.48 E-value=1.6 Score=45.97 Aligned_cols=33 Identities=36% Similarity=0.327 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|||+|.-|.+-|..|++.|++|++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 579999999999999999999999999988754
No 453
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=80.40 E-value=17 Score=41.68 Aligned_cols=37 Identities=22% Similarity=0.325 Sum_probs=28.4
Q ss_pred CcEEEcccccccccC---ccchHHHHHHHHHHHHHHHHHh
Q 004948 454 GRLFFAGEATIRRYP---ATMHGAFLSGLRETAKMAHCAN 490 (722)
Q Consensus 454 ~~L~fAGd~ts~~~~---g~~eGAi~SG~~AA~~Il~~l~ 490 (722)
+|++++||+.+...| .+|+-|++.+..-|..|...+.
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~ 390 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT 390 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc
Confidence 899999999986433 3788888888887777766543
No 454
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=80.21 E-value=1.4 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
..+|+|||+|-+|-++|+.|.+.|. +|+|+.++.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3789999999999999999999998 899998753
No 455
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.10 E-value=1.7 Score=45.34 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=30.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|+|||-+|-++|+.|++.|. +|+|+.++
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3789999999999999999999998 79999886
No 456
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=79.92 E-value=0.65 Score=45.84 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=29.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+|+|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 679999999999999999999999 99999864
No 457
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=79.91 E-value=1.7 Score=44.56 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.0
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|+|+|-+|-+.|+.|++.|. +|+|+.++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3789999999999999999999996 89999875
No 458
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=79.76 E-value=1.2 Score=48.59 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=31.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.+..|||.|.-|+..|..|+++|++|++++.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 679999999999999999999999999999864
No 459
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=79.67 E-value=1.7 Score=44.51 Aligned_cols=32 Identities=31% Similarity=0.369 Sum_probs=29.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..|+|+|||-+|-++|+.|++.|. +|+|+.++
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 689999999999999999999998 69999775
No 460
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=79.58 E-value=2 Score=40.01 Aligned_cols=39 Identities=13% Similarity=0.038 Sum_probs=33.7
Q ss_pred cCCcccCceEEEEEecCCcEEEEE-CCEEEEeCEEEEcCChh
Q 004948 256 NVPILYEKTVHTIRYGSDGVQVLA-GSQVFEGDMVLCTVPLG 296 (722)
Q Consensus 256 ~l~I~ln~~V~~I~~~~~~v~V~~-~G~~~~AD~VI~AvP~~ 296 (722)
+++++++ +|++|..+++++.|.+ +| ++.+|.||+|+...
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 6889999 9999998888888887 56 89999999999743
No 461
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=79.50 E-value=1.7 Score=48.01 Aligned_cols=33 Identities=33% Similarity=0.301 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..|+|+|+|-.|.++|..|+..|.+|++.|.+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 779999999999999999999999999998753
No 462
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=79.49 E-value=1.3 Score=45.48 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=28.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..|+|+|||-.|.+.|+.|++.| +|+|+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 67999999999999999999999 99999775
No 463
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=79.32 E-value=1.7 Score=45.88 Aligned_cols=32 Identities=16% Similarity=0.346 Sum_probs=29.2
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 48 LRVLVIGA-GLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
.+|+|||| |-.|.++|+.|+..|. +|+++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 78999998 9999999999999995 79999974
No 464
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=79.24 E-value=1.1 Score=49.75 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHH-HHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLA-AARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLs-AA~~Lak~G~~V~VLEa~~ 80 (722)
..+|.|||.|-+|++ +|..|.+.|++|++.|...
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 378999999999997 6999999999999999754
No 465
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=79.20 E-value=2 Score=43.79 Aligned_cols=33 Identities=36% Similarity=0.530 Sum_probs=30.1
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|.|| |.-|-..+.+|.++|++|+++-+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999998 9999999999999999999997654
No 466
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=78.71 E-value=1.8 Score=41.92 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=30.9
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+++|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999996 9999999999999999999998864
No 467
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=78.70 E-value=1.6 Score=45.64 Aligned_cols=35 Identities=17% Similarity=0.394 Sum_probs=30.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 45 SNKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 45 ~~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
+++.+|+|||||-.|.+.|+.|+..+. ++.++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345899999999999999999999886 79999874
No 468
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=78.52 E-value=1.5 Score=45.81 Aligned_cols=34 Identities=21% Similarity=0.415 Sum_probs=30.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 46 NKLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 46 ~~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
++.+|+|||||-.|.+.|+.|+..+. ++.++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34789999999999999999999886 79999873
No 469
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=78.41 E-value=1.9 Score=45.81 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
+.|+|+|+|-.|..+|..|.+.|.+|+|.+..
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 78999999999999999999999999999864
No 470
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=78.40 E-value=2 Score=40.65 Aligned_cols=33 Identities=33% Similarity=0.575 Sum_probs=30.4
Q ss_pred CcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|+|+|| |..|...+..|.+.|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999999 9999999999999999999998754
No 471
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=78.27 E-value=1.7 Score=45.28 Aligned_cols=33 Identities=33% Similarity=0.606 Sum_probs=29.5
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
..+|+|||+|..|-+.|+.|+..|. +|.++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999998885 79999975
No 472
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=78.19 E-value=1.6 Score=45.13 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
+.+|.+||=|..|..-|..|.++|++|+|++++.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998854
No 473
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=78.02 E-value=1.8 Score=47.89 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+|.|||+|..|..-|..|+++|++|++++++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 67999999999999999999999999999875
No 474
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=78.00 E-value=1.9 Score=44.10 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=32.0
Q ss_pred hcccCCCcEEEcccccccccCccchHHHHHHHHHHHHHHHHHhhh
Q 004948 448 AESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANAR 492 (722)
Q Consensus 448 ~~pv~~~~L~fAGd~ts~~~~g~~eGAi~SG~~AA~~Il~~l~~~ 492 (722)
++.+ ++||-|||.+... +..+.-|+.+|..||..|.+.|...
T Consensus 261 ~Ts~--p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 261 RTSE--KNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp BCSS--TTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC--CCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4555 8999999988643 2245668889999999999888654
No 475
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=77.85 E-value=2.2 Score=44.37 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=30.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|+|||=+|-++|+.|++.|. +|+|+.++
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3789999999999999999999998 79999886
No 476
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.54 E-value=2.1 Score=45.00 Aligned_cols=33 Identities=30% Similarity=0.608 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
..+|+|||+|=.|-.+|.+|+..|. +++|++..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3789999999999999999999998 69998873
No 477
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=77.37 E-value=1.7 Score=45.26 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=29.0
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
.+|+|||||-.|.+.|+.|+..|. +|.++|..
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 689999999999999999999885 79999864
No 478
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=77.36 E-value=2.1 Score=46.61 Aligned_cols=30 Identities=40% Similarity=0.640 Sum_probs=28.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC---cEEEEe
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF---RVTVLE 77 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~---~V~VLE 77 (722)
.+|+|+|||-+|.++|+.|.+.|. +|+|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 679999999999999999999998 799998
No 479
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=77.25 E-value=1.6 Score=44.98 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=29.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
.+|+|||+|-.|-.+|.+|+++|. +++|+|..
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 789999999999999999999997 69998873
No 480
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=76.87 E-value=2.3 Score=46.13 Aligned_cols=33 Identities=30% Similarity=0.288 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 789999999999999999999999999999754
No 481
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=76.86 E-value=2.1 Score=43.60 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
.+|+|||+|-+|-++|+.|.+.|. +|+|+.++
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 679999999999999999999997 79999875
No 482
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=76.78 E-value=2.5 Score=44.39 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 3689999999999999999999999999998864
No 483
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=76.76 E-value=1.9 Score=43.84 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=28.5
Q ss_pred CcEEEECccHHHHHHHHHHHHC--CCcEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRL--GFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~--G~~V~VLEa~ 79 (722)
++|.|||+|..|.+.|..|.+. |++|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 6899999999999999999998 5788888764
No 484
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.71 E-value=2.4 Score=43.23 Aligned_cols=35 Identities=40% Similarity=0.555 Sum_probs=31.7
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
+++|+|.|| |.-|...+..|.+.|++|+++.++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 378999999 99999999999999999999987653
No 485
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=76.56 E-value=1.9 Score=46.54 Aligned_cols=34 Identities=35% Similarity=0.450 Sum_probs=30.9
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCC-cEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~~ 80 (722)
..+|+|||+|-.|..+|..|...|. +|++++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3789999999999999999999998 899998764
No 486
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=76.38 E-value=2 Score=43.12 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=29.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC-cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF-RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~-~V~VLEa~ 79 (722)
.+|+|||+|-.|..+|..|++.|. +++|+|..
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 789999999999999999999998 68999884
No 487
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=76.25 E-value=2.3 Score=47.12 Aligned_cols=33 Identities=33% Similarity=0.387 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..|+|||+|..|..+|..|...|.+|+++|.+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789999999999999999999999999999753
No 488
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=76.19 E-value=2.3 Score=43.19 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=29.2
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEec
Q 004948 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEG 78 (722)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa 78 (722)
..+|+|||+| +.|..+|..|.+.|..|+|...
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 3889999976 7999999999999999999976
No 489
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=76.02 E-value=2.3 Score=43.75 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=29.8
Q ss_pred CCcEEEECcc-HHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGAG-LAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGAG-iAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..+|+|||+| +.|.-+|..|...|..|+|+...
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 4789999999 68999999999999999999643
No 490
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=75.94 E-value=2.7 Score=42.92 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=29.8
Q ss_pred CcEEEEC-ccHHHHHHHHHHHHCCCcEEEEecC
Q 004948 48 LRVLVIG-AGLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVG-AGiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..|+|+| +|-.|.+.|+.|++.|.+|+++.++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 6799999 9999999999999999999999875
No 491
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=75.67 E-value=2.4 Score=43.66 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.4
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
..+|+|||+ |+.|..+|..|.+.|..|+|..++
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 378999995 569999999999999999999873
No 492
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=77.44 E-value=0.57 Score=45.48 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||+|-.|.+.|..|.+.|++|++++++.
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 679999999999999999999999999998754
No 493
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=75.30 E-value=3.4 Score=39.90 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=29.1
Q ss_pred CcEEEECc-cHHHHHHHHHHH-HCCCcEEEEecCC
Q 004948 48 LRVLVIGA-GLAGLAAARQLM-RLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGA-GiAGLsAA~~La-k~G~~V~VLEa~~ 80 (722)
+.|+|.|| |-.|...|..|+ +.|++|+++.++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 34999995 999999999999 8999999998853
No 494
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=75.11 E-value=3.7 Score=42.29 Aligned_cols=33 Identities=30% Similarity=0.410 Sum_probs=30.2
Q ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCcEEEEecC
Q 004948 47 KLRVLVIGA-GLAGLAAARQLMRLGFRVTVLEGR 79 (722)
Q Consensus 47 ~~dVvIVGA-GiAGLsAA~~Lak~G~~V~VLEa~ 79 (722)
.+.|+|.|| |.-|...+..|.+.|++|+++.++
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 378999998 999999999999999999999875
No 495
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=74.80 E-value=2.7 Score=43.99 Aligned_cols=34 Identities=35% Similarity=0.508 Sum_probs=31.2
Q ss_pred CCcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 47 KLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
.++|.|||.|-.|...|..|+..|++|++++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3789999999999999999999999999999754
No 496
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=74.52 E-value=2.1 Score=44.07 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=28.5
Q ss_pred CcEEEECccHHHHHHHHHHHHCCC--cEEEEecC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGF--RVTVLEGR 79 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~--~V~VLEa~ 79 (722)
++|+|||||--|-++|+.|...+. ++.++|-.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999998875 69999874
No 497
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=74.52 E-value=2.8 Score=45.45 Aligned_cols=33 Identities=33% Similarity=0.305 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
..|+|||.|..|..+|..|...|.+|+++|.++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 789999999999999999999999999999854
No 498
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=74.33 E-value=2.9 Score=47.09 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=32.1
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKR 81 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~r 81 (722)
.+|+|||+|--|...|..|.+.|++|+|+|.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 6799999999999999999999999999999764
No 499
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=74.31 E-value=1.8 Score=45.22 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=30.0
Q ss_pred CCcEEEEC-ccHHHHHHHHHHHHCC--CcEEEEecCC
Q 004948 47 KLRVLVIG-AGLAGLAAARQLMRLG--FRVTVLEGRK 80 (722)
Q Consensus 47 ~~dVvIVG-AGiAGLsAA~~Lak~G--~~V~VLEa~~ 80 (722)
.++|+||| +|..|.+.|+.|+..| .+|.+++...
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 47899999 7999999999999998 6899999654
No 500
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=74.09 E-value=3.2 Score=43.52 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=30.9
Q ss_pred CcEEEECccHHHHHHHHHHHHCCCcEEEEecCC
Q 004948 48 LRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRK 80 (722)
Q Consensus 48 ~dVvIVGAGiAGLsAA~~Lak~G~~V~VLEa~~ 80 (722)
++|.|||.|-.|...|..|...|++|++++++.
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~ 197 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSK 197 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 679999999999999999999999999999764
Done!