Query 004952
Match_columns 722
No_of_seqs 370 out of 3409
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 15:37:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004952.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004952hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03052 acetate--CoA ligase; 100.0 6E-101 1E-105 888.9 72.6 717 1-722 4-728 (728)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 8.7E-85 1.9E-89 703.2 51.2 510 166-714 1-522 (528)
3 PRK12467 peptide synthase; Pro 100.0 1.1E-85 2.3E-90 874.1 39.4 638 19-713 1412-2084(3956)
4 PRK12467 peptide synthase; Pro 100.0 1.1E-84 2.4E-89 864.4 38.8 632 18-714 2935-3594(3956)
5 PTZ00237 acetyl-CoA synthetase 100.0 2.8E-80 6E-85 712.6 56.6 579 119-715 8-624 (647)
6 PRK12316 peptide synthase; Pro 100.0 1E-82 2.2E-87 858.6 37.8 624 19-711 2896-3541(5163)
7 PRK12316 peptide synthase; Pro 100.0 2.1E-82 4.5E-87 855.6 39.3 634 18-712 346-1004(5163)
8 TIGR02316 propion_prpE propion 100.0 4.2E-79 9.1E-84 703.2 59.0 572 120-715 2-605 (628)
9 TIGR03443 alpha_am_amid L-amin 100.0 1.3E-81 2.9E-86 785.9 40.9 654 18-711 86-825 (1389)
10 PLN02654 acetate-CoA ligase 100.0 5.4E-79 1.2E-83 704.2 58.5 578 119-715 30-641 (666)
11 PRK05691 peptide synthase; Val 100.0 1.1E-81 2.3E-86 843.4 41.3 627 24-711 3566-4225(4334)
12 PRK10252 entF enterobactin syn 100.0 3E-81 6.5E-86 780.2 41.1 629 20-711 303-964 (1296)
13 PRK03584 acetoacetyl-CoA synth 100.0 1.9E-78 4.1E-83 701.7 61.4 602 84-715 4-626 (655)
14 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.4E-78 3.1E-83 699.7 57.7 576 119-715 5-603 (625)
15 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.7E-78 8.1E-83 696.2 61.1 603 82-715 3-627 (652)
16 PRK00174 acetyl-CoA synthetase 100.0 2.4E-77 5.2E-82 690.6 58.8 574 119-715 17-611 (637)
17 PRK05691 peptide synthase; Val 100.0 2.9E-80 6.3E-85 829.7 36.9 639 18-712 2025-2695(4334)
18 PRK10524 prpE propionyl-CoA sy 100.0 5E-77 1.1E-81 687.4 57.4 573 119-715 2-606 (629)
19 KOG1175 Acyl-CoA synthetase [L 100.0 9.5E-77 2.1E-81 640.2 49.3 583 114-715 6-603 (626)
20 KOG1176 Acyl-CoA synthetase [L 100.0 1.5E-75 3.2E-80 635.2 48.3 496 188-716 28-534 (537)
21 KOG1177 Long chain fatty acid 100.0 4E-73 8.6E-78 571.4 38.7 503 186-718 60-591 (596)
22 PRK07788 acyl-CoA synthetase; 100.0 9.9E-71 2.1E-75 625.5 48.3 482 185-711 58-548 (549)
23 COG0318 CaiC Acyl-CoA syntheta 100.0 2.5E-70 5.5E-75 615.9 49.7 490 186-714 21-527 (534)
24 PLN03051 acyl-activating enzym 100.0 7.4E-70 1.6E-74 609.9 50.4 483 240-722 1-499 (499)
25 PRK04319 acetyl-CoA synthetase 100.0 2.7E-69 5.8E-74 616.1 52.1 508 166-714 35-559 (570)
26 PRK06334 long chain fatty acid 100.0 1.7E-69 3.6E-74 612.2 46.4 486 185-715 28-536 (539)
27 PRK07529 AMP-binding domain pr 100.0 1E-68 2.3E-73 616.5 52.3 510 186-715 35-571 (632)
28 PRK06060 acyl-CoA synthetase; 100.0 3.4E-69 7.5E-74 629.1 48.7 461 188-712 18-490 (705)
29 PLN02860 o-succinylbenzoate-Co 100.0 2.6E-68 5.5E-73 606.8 48.3 495 185-719 16-559 (563)
30 PRK13382 acyl-CoA synthetase; 100.0 2E-67 4.4E-72 596.0 47.3 480 185-710 52-536 (537)
31 PRK13295 cyclohexanecarboxylat 100.0 6.4E-67 1.4E-71 593.8 51.2 495 187-714 35-544 (547)
32 PLN02574 4-coumarate--CoA liga 100.0 3.7E-67 8E-72 596.9 49.2 490 187-716 50-556 (560)
33 PRK05677 long-chain-fatty-acid 100.0 1.4E-66 3E-71 592.7 51.2 495 186-716 34-559 (562)
34 COG1021 EntE Peptide arylation 100.0 4.5E-68 9.8E-73 522.8 33.1 496 185-715 37-539 (542)
35 PLN02246 4-coumarate--CoA liga 100.0 1.4E-66 3.1E-71 589.8 49.9 486 187-714 34-536 (537)
36 PRK08314 long-chain-fatty-acid 100.0 6.2E-66 1.3E-70 586.4 48.9 494 186-715 20-543 (546)
37 PLN02736 long-chain acyl-CoA s 100.0 1.5E-66 3.2E-71 601.2 42.2 506 186-718 54-645 (651)
38 PRK09274 peptide synthase; Pro 100.0 5.4E-66 1.2E-70 587.3 45.8 494 186-717 16-551 (552)
39 PRK07656 long-chain-fatty-acid 100.0 1.4E-65 3E-70 579.2 48.7 487 186-710 15-512 (513)
40 PRK07638 acyl-CoA synthetase; 100.0 1.1E-65 2.4E-70 575.7 45.8 466 186-715 11-482 (487)
41 PRK06839 acyl-CoA synthetase; 100.0 3.8E-65 8.2E-70 573.1 48.6 474 185-714 11-495 (496)
42 PRK07769 long-chain-fatty-acid 100.0 2.1E-65 4.5E-70 590.6 46.2 489 187-714 32-614 (631)
43 PRK05605 long-chain-fatty-acid 100.0 6.3E-65 1.4E-69 581.0 49.7 498 186-717 42-572 (573)
44 PRK05852 acyl-CoA synthetase; 100.0 5.4E-65 1.2E-69 576.5 48.7 508 165-714 7-532 (534)
45 TIGR03098 ligase_PEP_1 acyl-Co 100.0 8.1E-65 1.8E-69 573.2 49.8 490 187-710 11-514 (515)
46 PRK05851 long-chain-fatty-acid 100.0 1.2E-65 2.5E-70 579.9 42.2 468 186-714 12-522 (525)
47 PRK12583 acyl-CoA synthetase; 100.0 1.2E-64 2.6E-69 577.4 50.9 505 186-718 28-556 (558)
48 PRK08315 AMP-binding domain pr 100.0 7.5E-65 1.6E-69 579.2 49.0 504 186-719 26-556 (559)
49 PRK07470 acyl-CoA synthetase; 100.0 8.4E-65 1.8E-69 574.5 48.7 483 187-715 18-519 (528)
50 PLN02330 4-coumarate--CoA liga 100.0 1.4E-64 3.1E-69 574.4 49.4 489 186-716 38-543 (546)
51 PRK08279 long-chain-acyl-CoA s 100.0 9.1E-65 2E-69 582.4 46.9 497 186-715 47-565 (600)
52 PRK06145 acyl-CoA synthetase; 100.0 2.6E-64 5.6E-69 566.4 49.3 476 186-713 12-496 (497)
53 PRK06187 long-chain-fatty-acid 100.0 2.4E-64 5.2E-69 570.2 49.1 489 185-714 15-519 (521)
54 PRK07008 long-chain-fatty-acid 100.0 3.3E-64 7.1E-69 570.3 50.1 492 187-714 21-533 (539)
55 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.4E-64 7.4E-69 570.5 50.2 491 186-709 32-537 (538)
56 PRK05857 acyl-CoA synthetase; 100.0 1.7E-64 3.6E-69 572.5 46.4 485 185-716 23-533 (540)
57 PRK12476 putative fatty-acid-- 100.0 9.7E-65 2.1E-69 582.6 44.9 487 187-714 45-606 (612)
58 PRK06155 crotonobetaine/carnit 100.0 3.7E-64 7.9E-69 569.7 48.7 487 186-713 31-523 (542)
59 PLN03102 acyl-activating enzym 100.0 3.7E-64 8E-69 573.6 49.0 494 187-716 25-556 (579)
60 PRK07868 acyl-CoA synthetase; 100.0 6.1E-65 1.3E-69 607.3 44.2 482 185-714 456-958 (994)
61 PLN02614 long-chain acyl-CoA s 100.0 4.3E-65 9.3E-70 587.4 41.3 501 186-718 55-653 (666)
62 PRK03640 O-succinylbenzoic aci 100.0 2.4E-64 5.2E-69 564.7 46.0 464 185-714 11-482 (483)
63 PRK07514 malonyl-CoA synthase; 100.0 7.9E-64 1.7E-68 563.6 50.1 480 188-716 14-503 (504)
64 PRK08043 bifunctional acyl-[ac 100.0 1.2E-64 2.6E-69 591.3 44.7 486 186-714 214-713 (718)
65 PRK08316 acyl-CoA synthetase; 100.0 5.2E-64 1.1E-68 567.8 48.4 493 186-717 21-522 (523)
66 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 5.7E-64 1.2E-68 567.2 47.3 483 186-709 33-527 (527)
67 PRK09088 acyl-CoA synthetase; 100.0 1.2E-63 2.6E-68 559.5 48.9 470 186-715 5-486 (488)
68 PRK10946 entE enterobactin syn 100.0 1.5E-63 3.2E-68 564.6 49.8 484 190-716 37-534 (536)
69 PRK07786 long-chain-fatty-acid 100.0 1.2E-63 2.6E-68 566.3 47.7 499 172-717 16-527 (542)
70 PRK06087 short chain acyl-CoA 100.0 1.7E-63 3.7E-68 566.1 49.0 495 187-719 34-541 (547)
71 PRK05620 long-chain-fatty-acid 100.0 1.5E-63 3.2E-68 569.5 48.7 500 187-714 21-557 (576)
72 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.7E-63 3.6E-68 560.6 47.5 474 186-713 10-501 (502)
73 PRK12492 long-chain-fatty-acid 100.0 2.5E-63 5.5E-68 565.9 49.3 490 186-711 34-561 (562)
74 PRK08008 caiC putative crotono 100.0 2E-63 4.3E-68 561.9 47.9 491 186-709 17-517 (517)
75 PRK06018 putative acyl-CoA syn 100.0 4.3E-63 9.2E-68 561.8 49.9 498 186-714 20-534 (542)
76 PRK13390 acyl-CoA synthetase; 100.0 2E-63 4.2E-68 559.6 45.6 478 185-709 6-501 (501)
77 PRK07798 acyl-CoA synthetase; 100.0 5.9E-63 1.3E-67 560.5 49.9 496 186-714 13-532 (533)
78 PRK13388 acyl-CoA synthetase; 100.0 4E-63 8.6E-68 561.0 47.9 477 188-715 13-507 (540)
79 PLN02861 long-chain-fatty-acid 100.0 6.5E-64 1.4E-68 578.1 42.1 499 186-718 53-650 (660)
80 PRK08633 2-acyl-glycerophospho 100.0 1.9E-63 4.2E-68 614.2 44.2 498 186-715 625-1144(1146)
81 PRK07867 acyl-CoA synthetase; 100.0 2.3E-62 4.9E-67 553.1 49.0 469 189-714 16-507 (529)
82 PRK07787 acyl-CoA synthetase; 100.0 1.2E-62 2.5E-67 548.5 45.6 451 186-710 10-469 (471)
83 PRK08751 putative long-chain f 100.0 1.7E-62 3.8E-67 559.5 47.9 491 186-712 35-558 (560)
84 PRK06188 acyl-CoA synthetase; 100.0 3E-62 6.6E-67 553.1 49.1 481 187-714 23-517 (524)
85 TIGR02262 benz_CoA_lig benzoat 100.0 2.8E-62 6.1E-67 551.2 47.9 493 173-711 3-508 (508)
86 PRK06710 long-chain-fatty-acid 100.0 2.7E-62 5.7E-67 558.1 47.0 499 186-717 34-558 (563)
87 TIGR03205 pimA dicarboxylate-- 100.0 4.7E-62 1E-66 553.4 48.7 488 186-709 31-541 (541)
88 PRK06164 acyl-CoA synthetase; 100.0 4.6E-62 1E-66 553.7 48.5 497 186-719 20-537 (540)
89 PRK07059 Long-chain-fatty-acid 100.0 5.2E-62 1.1E-66 555.0 49.0 490 186-711 33-555 (557)
90 PRK06178 acyl-CoA synthetase; 100.0 9.5E-62 2.1E-66 554.0 49.7 513 166-715 26-566 (567)
91 PRK04813 D-alanine--poly(phosp 100.0 5.7E-62 1.2E-66 548.4 46.6 474 187-714 13-503 (503)
92 PRK07445 O-succinylbenzoic aci 100.0 3.4E-62 7.3E-67 539.3 43.6 428 209-718 19-451 (452)
93 PRK13383 acyl-CoA synthetase; 100.0 9.2E-62 2E-66 547.7 47.1 465 186-709 45-515 (516)
94 PLN02479 acetate-CoA ligase 100.0 1.7E-61 3.8E-66 551.2 48.8 500 186-722 30-567 (567)
95 PRK12406 long-chain-fatty-acid 100.0 8.9E-61 1.9E-65 539.1 51.5 485 193-715 3-504 (509)
96 PRK08974 long-chain-fatty-acid 100.0 8E-61 1.7E-65 545.6 50.4 495 186-717 33-558 (560)
97 PRK08162 acyl-CoA synthetase; 100.0 2.4E-60 5.2E-65 540.3 51.1 496 187-718 29-543 (545)
98 PRK08180 feruloyl-CoA synthase 100.0 2.1E-61 4.5E-66 554.8 42.6 489 186-718 49-600 (614)
99 PRK13391 acyl-CoA synthetase; 100.0 2.1E-60 4.5E-65 536.2 49.1 489 186-714 7-509 (511)
100 PTZ00342 acyl-CoA synthetase; 100.0 6.7E-61 1.5E-65 551.0 44.9 499 186-717 71-737 (746)
101 PRK09029 O-succinylbenzoic aci 100.0 1.4E-60 3E-65 530.1 45.0 438 186-718 13-457 (458)
102 PLN02387 long-chain-fatty-acid 100.0 2.6E-61 5.7E-66 558.7 40.6 506 186-718 68-693 (696)
103 PRK08308 acyl-CoA synthetase; 100.0 3.7E-60 8E-65 519.3 44.9 405 194-709 1-408 (414)
104 PTZ00216 acyl-CoA synthetase; 100.0 5.1E-61 1.1E-65 557.7 40.3 500 185-718 78-695 (700)
105 PRK08276 long-chain-fatty-acid 100.0 5E-60 1.1E-64 532.2 47.0 475 209-718 11-500 (502)
106 PRK06814 acylglycerophosphoeth 100.0 3.7E-60 7.9E-65 582.9 47.7 485 187-719 642-1137(1140)
107 PLN02430 long-chain-fatty-acid 100.0 1.7E-59 3.8E-64 540.3 41.9 501 186-718 52-650 (660)
108 PRK09192 acyl-CoA synthetase; 100.0 8.6E-59 1.9E-63 530.4 45.2 477 187-715 32-567 (579)
109 COG1020 EntF Non-ribosomal pep 100.0 1.8E-60 3.9E-65 551.5 31.2 543 21-636 75-642 (642)
110 PRK12582 acyl-CoA synthetase; 100.0 4.9E-59 1.1E-63 536.2 39.4 490 186-718 59-611 (624)
111 TIGR01923 menE O-succinylbenzo 100.0 2.6E-58 5.7E-63 508.9 42.5 428 211-708 1-436 (436)
112 PRK05850 acyl-CoA synthetase; 100.0 8.6E-58 1.9E-62 522.7 45.5 485 187-715 12-569 (578)
113 PRK07768 long-chain-fatty-acid 100.0 8.4E-56 1.8E-60 502.8 44.8 472 187-713 13-544 (545)
114 COG1022 FAA1 Long-chain acyl-C 100.0 5.1E-56 1.1E-60 485.9 36.4 485 185-718 25-605 (613)
115 KOG1256 Long-chain acyl-CoA sy 100.0 4.9E-53 1.1E-57 454.3 42.1 506 186-718 85-684 (691)
116 KOG1179 Very long-chain acyl-C 100.0 2.6E-52 5.6E-57 430.0 34.0 494 185-711 86-610 (649)
117 PF00501 AMP-binding: AMP-bind 100.0 3.6E-53 7.8E-58 465.1 27.4 391 185-618 4-417 (417)
118 KOG1180 Acyl-CoA synthetase [L 100.0 2.2E-52 4.7E-57 428.4 30.9 488 205-718 85-673 (678)
119 TIGR01733 AA-adenyl-dom amino 100.0 2.7E-51 5.8E-56 448.9 37.9 393 211-643 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 1.1E-46 2.4E-51 404.6 33.2 316 353-714 32-357 (358)
121 PTZ00297 pantothenate kinase; 100.0 7.5E-43 1.6E-47 416.3 39.3 468 186-718 437-999 (1452)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 3.5E-41 7.5E-46 360.3 27.8 286 356-704 95-386 (386)
123 KOG1178 Non-ribosomal peptide 100.0 1.7E-38 3.7E-43 359.6 22.7 490 188-711 48-576 (1032)
124 TIGR02155 PA_CoA_ligase phenyl 100.0 3.8E-36 8.2E-41 329.5 27.5 322 353-706 72-418 (422)
125 TIGR03335 F390_ftsA coenzyme F 100.0 1.1E-28 2.4E-33 270.7 28.8 325 352-705 82-440 (445)
126 KOG3628 Predicted AMP-binding 99.9 3.7E-24 8.1E-29 235.1 35.8 503 186-716 780-1354(1363)
127 TIGR03089 conserved hypothetic 99.9 2.6E-24 5.6E-29 213.3 23.6 216 186-447 6-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 8E-22 1.7E-26 205.2 27.4 319 352-703 86-428 (438)
129 PRK09188 serine/threonine prot 99.9 2.1E-21 4.6E-26 203.2 14.2 116 589-715 209-329 (365)
130 TIGR02304 aden_form_hyp probab 99.7 2.9E-15 6.3E-20 160.8 25.4 258 358-663 101-378 (430)
131 KOG3628 Predicted AMP-binding 99.5 2E-12 4.4E-17 143.8 24.2 488 187-714 105-704 (1363)
132 PF13193 AMP-binding_C: AMP-bi 99.4 8.7E-13 1.9E-17 105.6 6.3 69 626-702 1-73 (73)
133 PF13745 HxxPF_rpt: HxxPF-repe 98.9 2.4E-11 5.3E-16 102.1 -5.3 84 41-132 1-91 (91)
134 PF04443 LuxE: Acyl-protein sy 98.9 4E-08 8.7E-13 103.5 17.0 237 353-622 86-358 (365)
135 PF03321 GH3: GH3 auxin-respon 98.3 1.1E-05 2.4E-10 90.1 14.0 89 591-681 371-467 (528)
136 PLN02249 indole-3-acetic acid- 97.8 0.0012 2.7E-08 74.1 18.7 43 590-632 409-455 (597)
137 PLN02620 indole-3-acetic acid- 97.5 0.012 2.6E-07 65.7 20.6 43 590-632 422-468 (612)
138 PLN02247 indole-3-acetic acid- 97.4 0.0087 1.9E-07 66.9 18.8 43 590-632 416-462 (606)
139 PF14535 AMP-binding_C_2: AMP- 97.1 0.0025 5.4E-08 53.7 8.0 84 619-705 1-91 (96)
140 COG1541 PaaK Coenzyme F390 syn 91.7 0.81 1.8E-05 49.1 8.9 81 209-290 109-192 (438)
141 PF00501 AMP-binding: AMP-bind 75.4 15 0.00032 39.8 9.6 89 354-451 8-99 (417)
142 PLN02736 long-chain acyl-CoA s 74.1 37 0.00079 39.6 12.9 119 354-479 57-180 (651)
143 TIGR03335 F390_ftsA coenzyme F 69.6 25 0.00055 38.8 9.7 77 209-288 105-184 (445)
144 PRK09274 peptide synthase; Pro 67.5 35 0.00076 38.7 10.7 99 354-453 19-121 (552)
145 TIGR02155 PA_CoA_ligase phenyl 66.5 30 0.00064 37.8 9.5 81 209-290 94-177 (422)
146 PRK07656 long-chain-fatty-acid 66.0 47 0.001 37.1 11.2 97 354-460 18-117 (513)
147 TIGR03089 conserved hypothetic 65.6 30 0.00065 34.2 8.4 76 189-281 148-226 (227)
148 PRK04319 acetyl-CoA synthetase 63.3 55 0.0012 37.3 11.2 85 374-459 72-159 (570)
149 PLN03052 acetate--CoA ligase; 63.1 48 0.001 39.2 10.9 99 354-454 188-289 (728)
150 PRK08008 caiC putative crotono 62.3 56 0.0012 36.6 10.9 101 354-459 20-123 (517)
151 PRK00174 acetyl-CoA synthetase 62.0 47 0.001 38.5 10.5 97 354-454 80-179 (637)
152 PRK13295 cyclohexanecarboxylat 61.9 42 0.0009 38.0 9.9 97 354-454 37-136 (547)
153 TIGR02188 Ac_CoA_lig_AcsA acet 60.0 52 0.0011 38.0 10.4 97 354-454 70-169 (625)
154 PLN02246 4-coumarate--CoA liga 59.8 52 0.0011 37.2 10.1 98 354-459 36-136 (537)
155 PRK06334 long chain fatty acid 59.1 58 0.0013 36.9 10.4 84 375-459 45-128 (539)
156 PLN02654 acetate-CoA ligase 59.1 61 0.0013 37.9 10.8 97 354-454 102-201 (666)
157 PRK07514 malonyl-CoA synthase; 59.0 60 0.0013 36.1 10.4 86 373-459 26-114 (504)
158 PTZ00237 acetyl-CoA synthetase 59.0 64 0.0014 37.5 10.9 95 355-453 75-172 (647)
159 KOG1177 Long chain fatty acid 58.9 46 0.00099 36.2 8.4 109 372-481 74-199 (596)
160 PRK07798 acyl-CoA synthetase; 58.9 65 0.0014 36.1 10.8 86 374-460 27-115 (533)
161 PRK03584 acetoacetyl-CoA synth 58.8 63 0.0014 37.6 10.8 95 355-454 98-195 (655)
162 PRK06187 long-chain-fatty-acid 58.8 60 0.0013 36.2 10.4 84 376-460 32-118 (521)
163 PRK05857 acyl-CoA synthetase; 58.6 45 0.00097 37.8 9.3 94 354-455 27-123 (540)
164 PLN02387 long-chain-fatty-acid 58.5 62 0.0013 38.1 10.7 103 374-481 105-210 (696)
165 PRK10524 prpE propionyl-CoA sy 57.6 63 0.0014 37.4 10.5 96 354-453 66-164 (629)
166 PRK06839 acyl-CoA synthetase; 56.2 74 0.0016 35.3 10.5 96 354-459 15-114 (496)
167 PRK08316 acyl-CoA synthetase; 56.1 65 0.0014 36.0 10.1 86 374-460 35-123 (523)
168 PLN02574 4-coumarate--CoA liga 55.6 71 0.0015 36.3 10.4 99 354-460 52-154 (560)
169 PRK07788 acyl-CoA synthetase; 55.0 52 0.0011 37.3 9.1 84 375-459 74-160 (549)
170 PRK08279 long-chain-acyl-CoA s 54.7 75 0.0016 36.5 10.5 96 354-459 50-148 (600)
171 KOG1176 Acyl-CoA synthetase [L 54.6 62 0.0013 36.5 9.2 97 358-461 34-135 (537)
172 TIGR03443 alpha_am_amid L-amin 54.5 51 0.0011 42.4 9.8 98 354-452 249-349 (1389)
173 PTZ00342 acyl-CoA synthetase; 54.0 1.4E+02 0.003 35.5 12.5 118 354-480 74-208 (746)
174 PRK13388 acyl-CoA synthetase; 53.9 88 0.0019 35.4 10.7 84 375-459 26-113 (540)
175 PRK08315 AMP-binding domain pr 53.7 68 0.0015 36.3 9.8 92 355-454 30-124 (559)
176 PRK07529 AMP-binding domain pr 52.8 75 0.0016 36.8 10.1 96 354-452 38-136 (632)
177 TIGR01217 ac_ac_CoA_syn acetoa 52.7 87 0.0019 36.5 10.6 93 356-453 99-194 (652)
178 PRK13383 acyl-CoA synthetase; 51.4 60 0.0013 36.4 8.8 84 375-459 60-146 (516)
179 PRK07470 acyl-CoA synthetase; 51.4 83 0.0018 35.3 10.0 82 374-456 31-115 (528)
180 TIGR02316 propion_prpE propion 51.2 57 0.0012 37.8 8.8 96 354-453 65-163 (628)
181 PLN02614 long-chain acyl-CoA s 51.0 1.1E+02 0.0024 35.7 11.1 87 374-461 78-167 (666)
182 PRK08276 long-chain-fatty-acid 50.6 68 0.0015 35.7 9.1 83 376-459 12-97 (502)
183 PRK13391 acyl-CoA synthetase; 49.8 1E+02 0.0022 34.5 10.3 97 354-458 10-109 (511)
184 PRK06155 crotonobetaine/carnit 49.5 79 0.0017 35.8 9.4 86 375-461 46-134 (542)
185 PRK07059 Long-chain-fatty-acid 49.3 89 0.0019 35.4 9.9 95 354-458 36-133 (557)
186 PRK08751 putative long-chain f 49.1 84 0.0018 35.6 9.6 95 354-458 38-136 (560)
187 TIGR03208 cyc_hxne_CoA_lg cycl 48.9 88 0.0019 35.3 9.7 97 354-454 35-134 (538)
188 PLN02330 4-coumarate--CoA liga 48.7 74 0.0016 36.0 9.1 97 354-458 41-140 (546)
189 TIGR01733 AA-adenyl-dom amino 48.2 61 0.0013 34.8 8.0 67 392-459 20-86 (408)
190 PLN03102 acyl-activating enzym 47.8 62 0.0013 37.1 8.3 83 375-458 39-124 (579)
191 PRK05677 long-chain-fatty-acid 47.7 88 0.0019 35.5 9.5 94 354-457 37-134 (562)
192 PLN02430 long-chain-fatty-acid 47.5 1.1E+02 0.0025 35.6 10.5 120 354-479 55-179 (660)
193 PRK08314 long-chain-fatty-acid 46.8 1E+02 0.0022 34.7 9.9 85 375-460 35-123 (546)
194 PRK12583 acyl-CoA synthetase; 46.8 1E+02 0.0023 34.8 9.9 93 354-454 31-126 (558)
195 PRK06087 short chain acyl-CoA 46.6 82 0.0018 35.6 9.0 90 354-452 36-128 (547)
196 PRK09088 acyl-CoA synthetase; 46.3 1.2E+02 0.0026 33.6 10.1 92 354-453 8-102 (488)
197 PRK06164 acyl-CoA synthetase; 46.3 80 0.0017 35.6 8.9 91 354-454 23-116 (540)
198 PRK13390 acyl-CoA synthetase; 46.1 1.3E+02 0.0029 33.4 10.5 93 354-454 10-105 (501)
199 TIGR03098 ligase_PEP_1 acyl-Co 45.5 74 0.0016 35.5 8.4 84 375-459 25-111 (515)
200 COG0318 CaiC Acyl-CoA syntheta 44.3 1.7E+02 0.0037 33.0 11.1 93 354-454 24-119 (534)
201 PRK05605 long-chain-fatty-acid 43.9 96 0.0021 35.3 9.1 84 375-459 57-143 (573)
202 PRK03640 O-succinylbenzoic aci 43.7 1.6E+02 0.0035 32.4 10.7 94 354-457 15-111 (483)
203 PLN02861 long-chain-fatty-acid 42.8 1E+02 0.0022 36.0 9.1 86 374-460 76-164 (660)
204 PRK06018 putative acyl-CoA syn 42.6 1.3E+02 0.0028 34.0 9.8 100 354-459 23-125 (542)
205 PLN02479 acetate-CoA ligase 41.9 1.1E+02 0.0024 34.9 9.1 93 354-456 33-128 (567)
206 PRK12492 long-chain-fatty-acid 41.4 94 0.002 35.3 8.4 81 374-455 48-132 (562)
207 PRK05850 acyl-CoA synthetase; 41.1 2.3E+02 0.0051 32.1 11.7 102 354-459 14-123 (578)
208 PF09580 Spore_YhcN_YlaJ: Spor 40.6 1E+02 0.0023 28.8 7.3 54 624-685 77-130 (177)
209 PRK10696 tRNA 2-thiocytidine b 40.6 2.3E+02 0.0049 28.5 10.1 77 211-287 4-94 (258)
210 PRK08162 acyl-CoA synthetase; 40.4 96 0.0021 35.0 8.3 84 375-459 43-129 (545)
211 PRK12476 putative fatty-acid-- 39.9 2.4E+02 0.0053 32.4 11.7 101 354-458 47-155 (612)
212 PRK13382 acyl-CoA synthetase; 39.9 1.3E+02 0.0029 33.8 9.4 94 354-457 56-152 (537)
213 PLN02860 o-succinylbenzoate-Co 39.8 82 0.0018 35.9 7.6 79 375-454 32-113 (563)
214 TIGR01923 menE O-succinylbenzo 38.5 98 0.0021 33.6 7.8 69 385-454 12-80 (436)
215 PRK12406 long-chain-fatty-acid 38.0 1E+02 0.0022 34.4 8.0 85 375-460 11-98 (509)
216 TIGR02898 spore_YhcN_YlaJ spor 37.2 1.3E+02 0.0027 27.8 6.8 53 625-683 57-109 (158)
217 PRK08180 feruloyl-CoA synthase 36.1 1.8E+02 0.004 33.4 9.8 95 354-453 52-154 (614)
218 PRK06178 acyl-CoA synthetase; 35.6 1.5E+02 0.0033 33.6 9.0 85 375-460 58-145 (567)
219 cd02070 corrinoid_protein_B12- 34.4 4.2E+02 0.0092 25.4 10.7 109 379-491 64-183 (201)
220 TIGR02262 benz_CoA_lig benzoat 32.7 1.8E+02 0.004 32.3 8.9 96 354-459 18-116 (508)
221 PRK07867 acyl-CoA synthetase; 32.6 1.8E+02 0.0039 32.8 8.8 83 375-458 28-114 (529)
222 PRK05620 long-chain-fatty-acid 32.6 1.6E+02 0.0034 33.6 8.5 99 354-459 23-125 (576)
223 PRK07008 long-chain-fatty-acid 31.5 1.5E+02 0.0033 33.4 8.1 83 375-458 39-124 (539)
224 PTZ00216 acyl-CoA synthetase; 31.3 1.8E+02 0.0039 34.3 8.8 88 372-460 118-208 (700)
225 PRK06188 acyl-CoA synthetase; 31.0 1.5E+02 0.0033 33.1 8.0 80 374-454 36-118 (524)
226 PRK06060 acyl-CoA synthetase; 30.5 1.7E+02 0.0036 34.5 8.4 92 354-456 19-113 (705)
227 PRK08974 long-chain-fatty-acid 30.5 1.8E+02 0.004 32.9 8.6 81 375-456 48-132 (560)
228 PRK05852 acyl-CoA synthetase; 29.6 1.8E+02 0.0039 32.7 8.2 90 354-451 29-121 (534)
229 cd06451 AGAT_like Alanine-glyo 29.0 5.7E+02 0.012 26.7 11.6 76 212-287 27-104 (356)
230 PRK08633 2-acyl-glycerophospho 28.4 2.6E+02 0.0056 35.0 10.1 99 353-460 627-727 (1146)
231 TIGR01734 D-ala-DACP-lig D-ala 28.1 1.5E+02 0.0033 32.8 7.2 79 375-454 25-106 (502)
232 PRK07769 long-chain-fatty-acid 28.0 5.6E+02 0.012 29.5 12.1 101 354-458 34-142 (631)
233 PRK13237 tyrosine phenol-lyase 26.2 3E+02 0.0065 30.4 8.5 46 230-280 114-174 (460)
234 PRK09162 hypoxanthine-guanine 26.2 1.6E+02 0.0035 27.8 5.9 43 209-252 16-59 (181)
235 PRK07786 long-chain-fatty-acid 26.0 2.4E+02 0.0052 31.7 8.5 83 375-458 42-127 (542)
236 TIGR03205 pimA dicarboxylate-- 25.9 2.1E+02 0.0046 32.2 8.0 78 375-453 46-126 (541)
237 PF01041 DegT_DnrJ_EryC1: DegT 25.9 1.6E+02 0.0034 31.4 6.5 63 221-287 52-120 (363)
238 PRK12582 acyl-CoA synthetase; 25.6 2.1E+02 0.0045 33.0 8.0 95 354-452 62-164 (624)
239 PRK04813 D-alanine--poly(phosp 25.6 2.2E+02 0.0047 31.5 7.9 78 375-453 27-107 (503)
240 PF09664 DUF2399: Protein of u 25.2 5.3E+02 0.012 23.6 10.6 112 373-494 21-135 (152)
241 PRK09029 O-succinylbenzoic aci 24.9 2.5E+02 0.0054 30.7 8.1 79 374-453 27-108 (458)
242 PRK06710 long-chain-fatty-acid 24.8 2E+02 0.0044 32.5 7.6 81 375-456 49-132 (563)
243 PLN03051 acyl-activating enzym 24.4 4.9E+02 0.011 28.9 10.5 98 189-290 117-218 (499)
244 PLN02419 methylmalonate-semial 23.4 3.5E+02 0.0075 31.2 8.8 50 395-444 248-302 (604)
245 TIGR02275 DHB_AMP_lig 2,3-dihy 23.3 2.1E+02 0.0046 32.1 7.3 79 375-454 48-129 (527)
246 PRK09192 acyl-CoA synthetase; 22.6 3.6E+02 0.0079 30.6 9.1 87 373-460 47-143 (579)
247 TIGR01139 cysK cysteine syntha 22.4 4E+02 0.0086 27.4 8.5 67 222-289 45-112 (298)
248 COG4009 Uncharacterized protei 22.3 4E+02 0.0086 21.2 6.0 67 209-286 9-79 (88)
249 KOG1178 Non-ribosomal peptide 22.1 3.7 8.1E-05 49.1 -7.3 136 211-382 130-266 (1032)
250 TIGR02379 ECA_wecE TDP-4-keto- 22.0 2.4E+02 0.0052 30.3 6.9 62 222-287 59-126 (376)
251 PF06277 EutA: Ethanolamine ut 21.7 3.7E+02 0.0079 29.6 8.0 56 188-250 370-425 (473)
252 PRK07868 acyl-CoA synthetase; 21.4 5.1E+02 0.011 32.0 10.4 93 354-459 460-555 (994)
253 PF01037 AsnC_trans_reg: AsnC 21.3 3.3E+02 0.0072 20.6 6.0 49 622-682 10-58 (74)
254 COG0365 Acs Acyl-coenzyme A sy 21.3 4E+02 0.0087 30.1 8.6 94 359-457 27-124 (528)
255 PLN02565 cysteine synthase 21.0 5.9E+02 0.013 26.6 9.5 59 230-288 63-121 (322)
256 PLN02556 cysteine synthase/L-3 20.3 3.9E+02 0.0086 28.5 8.1 67 222-288 98-165 (368)
257 PRK08308 acyl-CoA synthetase; 20.3 3.4E+02 0.0075 29.2 8.0 78 375-453 8-87 (414)
No 1
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=5.8e-101 Score=888.93 Aligned_cols=717 Identities=62% Similarity=1.054 Sum_probs=606.5
Q ss_pred CCCcccccChhHHHHcCCChhHHHHHHHHHHHHHhhccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccC
Q 004952 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIK 80 (722)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~ 80 (722)
|||.+++|+++||+++|+..+++++|.+.|+++...+++ +-..++-.. ..+.|+|..+.+++|+|++.++-++.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (728)
T PLN03052 4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGA-SPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL 81 (728)
T ss_pred ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcC-CchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence 799999999999999999999999999999999977653 566777777 889999999999999999999999988877
Q ss_pred CCCCccCCCccccccccHHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCC
Q 004952 81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK 160 (722)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 160 (722)
++.+.|.|.+....++++..+++..+.......|...+.+|+.|+++++++++.||..+++.+.+.|.+++.++++..+.
T Consensus 82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~ 161 (728)
T PLN03052 82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE 161 (728)
T ss_pred CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence 78889999988888889988888764443334477777899999999999999999999999988999999999875333
Q ss_pred CCCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 004952 161 SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (722)
Q Consensus 161 ~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~ 239 (722)
..+..+||.++.+|++++|++++. +++||++|+++.+++.+++..+++||+||+++++++|++|++. +++||+|+++
T Consensus 162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~ 239 (728)
T PLN03052 162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239 (728)
T ss_pred CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 456679999999999999998864 4689999999987632233456899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCC
Q 004952 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (722)
Q Consensus 240 ~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (722)
++|++++++++|||+++|++++|++|+++.+++.+++++++++++|+++...++++.++....+.+.....++++.....
T Consensus 240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~ 319 (728)
T PLN03052 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK 319 (728)
T ss_pred eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999998887888888777776655555666654321
Q ss_pred CCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCE
Q 004952 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (722)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~ 399 (722)
........+..+|++++.............+...++++++||+|||||||+||||+++|++++..+......++++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~ 399 (728)
T PLN03052 320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI 399 (728)
T ss_pred ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence 11111122356688876543210001112223346799999999999999999999999998877766666788999999
Q ss_pred EEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEee
Q 004952 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (722)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~ 479 (722)
++++++++|+++.+.++.+|++|++++++++.++++.+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus 400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 99999999999998899999999999999877777889999999999999999999999988765566789999999999
Q ss_pred cCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe
Q 004952 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (722)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~ 559 (722)
||+++++...|+...++..+++|.||+||++++++......+...+++|+|++|++++|+|++|+++|.|++++|||++.
T Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~ 559 (728)
T PLN03052 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF 559 (728)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence 99999999888877665568999999999987655554444556688999999999999999999999987557999998
Q ss_pred cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcc
Q 004952 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (722)
Q Consensus 560 ~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (722)
+.+++...++++++.+..||..+|..+|++||+|||++++++||+++|+||+||+||++|+||++.|||++|+..||+|.
T Consensus 560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~ 639 (728)
T PLN03052 560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVL 639 (728)
T ss_pred CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcc
Confidence 88777766677777778899888888888999999999999999999999999999999999999999999854799999
Q ss_pred eeEEEeecCCCCCceEEEEEEEec--CCCCCCHHHHHHHHHHHH----HhhcCCC-eeecCCCCCCCCchhhHHHHHHHH
Q 004952 640 ETAAISVSPAGGGPEVLVIFVVLK--KGFTSQPDKLKMIFSKAI----QSKLNPL-FKVVPEFPRTASNKLLRRVLRDQI 712 (722)
Q Consensus 640 ~~~vv~~~~~~~g~~~l~a~vv~~--~~~~~~~~~l~~~l~~~l----~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~ 712 (722)
||+|++++++..|++++++||+++ ++...+.++|++++++.+ +.+++|. ++++++||+|+|||++|+.|++++
T Consensus 640 eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~ 719 (728)
T PLN03052 640 ETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQL 719 (728)
T ss_pred eEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHH
Confidence 999999999866558999999998 555556677777765554 5567774 558999999999999999999998
Q ss_pred hhhhhhcccC
Q 004952 713 KHELSVRSRI 722 (722)
Q Consensus 713 ~~~~~~~~~~ 722 (722)
.+... +|||
T Consensus 720 ~~~~~-~~~~ 728 (728)
T PLN03052 720 AQELS-RSKL 728 (728)
T ss_pred Hhhhh-ccCC
Confidence 77765 7775
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=8.7e-85 Score=703.17 Aligned_cols=510 Identities=27% Similarity=0.422 Sum_probs=434.2
Q ss_pred CcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCC
Q 004952 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMT 243 (722)
Q Consensus 166 ~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~--v~~gd~V~l~~~~s 243 (722)
+||.++.+|.+++|++++... ..+|++|+++.++. ++. +++||+||.++++++|+.|++. + +||||+++||++
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~-~~~~~~aii~~~e~--~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~ 75 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEA-DRPDDTAIIFDGED--GLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNS 75 (528)
T ss_pred CCcCCceeechhhhhhhhhhc-cCCCceEEEEEcCC--CCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCC
Confidence 599999999999999997522 34899999999773 222 7999999999999999999975 7 999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCC
Q 004952 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (722)
Q Consensus 244 ~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (722)
++++++||||+|+||+++|+.+.++++.+++++++++++++|++++..++++.++....+.+.... ++++....
T Consensus 76 pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~iv~~r~~----- 149 (528)
T COG0365 76 PEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-VVVVPRLG----- 149 (528)
T ss_pred HHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-eEEecccc-----
Confidence 999999999999999999999999999999999999999999999999999988887777766555 44443221
Q ss_pred CCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH-HhhhhcCCCCCCEEEE
Q 004952 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCW 402 (722)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~-~~~~~~~~~~~d~~l~ 402 (722)
.+|.++.+..+. ..+....+++|++|++|||||||+||||+|+|++++.... .....+.+.++|++++
T Consensus 150 ------~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~ 218 (528)
T COG0365 150 ------LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWN 218 (528)
T ss_pred ------ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEe
Confidence 677887766543 3344457899999999999999999999999998755554 4445688889999999
Q ss_pred ecCccccchhHH-HHHHhhcCCEEEEecCCCC--hhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEee
Q 004952 403 PTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (722)
Q Consensus 403 ~~~~~~~~~~~~-~~~~L~~G~~lv~~~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~ 479 (722)
.++++|.++.+. +|++|++|+|++++++.++ +..++++|++++||+++++|+.+++|.+......+++++||.+.++
T Consensus 219 ~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~Sa 298 (528)
T COG0365 219 SSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSA 298 (528)
T ss_pred CCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeecc
Confidence 999999999965 8999999999999987665 7899999999999999999999999999876677899999999999
Q ss_pred cCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe
Q 004952 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (722)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~ 559 (722)
||+|+++.++|+.+.++ ++|.+.||+||+++++....+ +...++.|+|+||+++.|+|++|+++|+|+ |+|++.
T Consensus 299 GEPLnpe~~~w~~~~~g-~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~---G~Lvi~ 372 (528)
T COG0365 299 GEPLNPEAFEWFYSALG-VWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV---GELVVR 372 (528)
T ss_pred CCCCCHHHHHHHHHHhC-CCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCCCCc---eEEEEe
Confidence 99999999999998874 999999999999976666555 445566699999999999999999999997 899995
Q ss_pred cccCCCcccccc-ccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCc
Q 004952 560 PLYLGASDRLLN-ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (722)
Q Consensus 560 ~~y~~~~~~~~~-~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V 638 (722)
....+....|++ ++.+.+.|-. . ||.|||.+++|+||+++|+||.||+||+.|+||.+.|||++|+ +||+|
T Consensus 373 ~~~p~~~~~~w~d~er~~~~y~~------~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~-~hP~V 444 (528)
T COG0365 373 LPWPGMALTYWNDPERYKEAYFG------R-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLL-AHPAV 444 (528)
T ss_pred CCCchhhhhhhCCHHHHHHHHhh------c-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHH-hCcce
Confidence 433333333333 3344333321 1 8999999999999999999999999999999999999999996 99999
Q ss_pred ceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHH----HhhcCCCe-eecCCCCCCCCchhhHHHHHHHHh
Q 004952 639 LETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAI----QSKLNPLF-KVVPEFPRTASNKLLRRVLRDQIK 713 (722)
Q Consensus 639 ~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l----~~~~~p~~-~~v~~lP~t~~GKvdR~~L~~~~~ 713 (722)
.||+||+.+|+..| +.++|||++++|...+ +|++.|++++ ..+..|+. .++++||||.||||.|+.|++.+.
T Consensus 445 aEaAvVg~pd~~kg-~~v~afVvL~~g~~~~--~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 445 AEAAVVGVPDPGKG-QIVLAFVVLAAGVEPN--ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILH 521 (528)
T ss_pred eeeEEEeccCCCCC-cEEEEEEEecCCCChH--HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHh
Confidence 99999999999999 8999999999987655 5555554444 44667744 499999999999999999999887
Q ss_pred h
Q 004952 714 H 714 (722)
Q Consensus 714 ~ 714 (722)
+
T Consensus 522 ~ 522 (528)
T COG0365 522 K 522 (528)
T ss_pred h
Confidence 4
No 3
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-85 Score=874.14 Aligned_cols=638 Identities=19% Similarity=0.203 Sum_probs=519.5
Q ss_pred ChhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCCC-----CCccC--CCc
Q 004952 19 KLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PLYWF--PSL 90 (722)
Q Consensus 19 ~~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~ 90 (722)
..++..+|.+.|+++++. +.+++||++||++ |++.|+++|..+..|+ ||+||++++..... ..... ...
T Consensus 1412 ~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~-i~~~l~~~r~~~~~pL--Fq~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1488 (3956)
T PRK12467 1412 EVDGQASFQQLLQQVKQAALEAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMFNHQRDDHQAQAQLPGLSVESLSWE 1488 (3956)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHHhcccccCCCCCc--eeEEEEeecccccccccCCCceeEeeecC
Confidence 345667788888888777 6666999999999 9999999988888888 99999987643221 11111 112
Q ss_pred cccccccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCCCCc
Q 004952 91 DQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHGGTW 167 (722)
Q Consensus 91 ~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~w 167 (722)
...++|||++.+.+.++.+...+ |+. ++|++.++++|.++|.++|+++...++.+..++ ++..+.......|
T Consensus 1489 ~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~~~~~~~~ 1563 (3956)
T PRK12467 1489 SQTAQFDLTLDTYESSEGLQASLTYAT-----DLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAERRQILEGW 1563 (3956)
T ss_pred CcccccceEEEEEecCCeEEEEEEEeC-----CcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHHhhhhHHhh
Confidence 34678899988877777787788 998 999999999999999999999998888877764 4544444445567
Q ss_pred CCCCccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004952 168 LPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (722)
Q Consensus 168 ~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~ 244 (722)
+.+........+++. ..+++++||++|+++.++ .+||+||+++++++|++|++. +++|++|+++++||+
T Consensus 1564 ~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~ 1635 (3956)
T PRK12467 1564 NATHTGYPLARLVHQLIEDQAAATPEAVALVFGEQ--------ELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSL 1635 (3956)
T ss_pred cCCccCCCccccHHHHHHHHHHhCCCCeEEEeCCc--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCH
Confidence 765443332333433 245689999999999877 999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCC
Q 004952 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIP 324 (722)
Q Consensus 245 ~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (722)
++++++|||+|+|++|+|+||.+|.+|+.+++++++++++|++....... + .......+.+...
T Consensus 1636 ~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~---~------~~~~~~~~~~~~~------- 1699 (3956)
T PRK12467 1636 EMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARL---P------LPDGLRSLVLDQE------- 1699 (3956)
T ss_pred HHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhC---c------cccCCcEEEeccc-------
Confidence 99999999999999999999999999999999999999999987532111 0 0001112222110
Q ss_pred CCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEec
Q 004952 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPT 404 (722)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~ 404 (722)
.+..... ....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|++++++
T Consensus 1700 --------~~~~~~~-----~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~ 1766 (3956)
T PRK12467 1700 --------DDWLEGY-----SDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFT 1766 (3956)
T ss_pred --------cchhccC-----CCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEec
Confidence 0000111 111222345679999999999999999999999999999999988899999999999999
Q ss_pred CccccchhHHHHHHhhcCCEEEEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCC
Q 004952 405 NLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGET 482 (722)
Q Consensus 405 ~~~~~~~~~~~~~~L~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~ 482 (722)
|++||++++++|.+|++|+++++.+.. .++..+++.|++++||++.++|++++.|..... ...++++||.+++|||+
T Consensus 1767 ~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~ 1845 (3956)
T PRK12467 1767 SFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEA 1845 (3956)
T ss_pred CccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEcccc
Confidence 999999999999999999999998743 467899999999999999999999999987422 23457899999999999
Q ss_pred CCcchHHHHHhhccCCcccccccccccccccccCCcC----CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE
Q 004952 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (722)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (722)
++++..+.|.+.+++.+++|.||+||+++.++..... ......++|+|++|++++|+|++++++|.|++ |||+|
T Consensus 1846 l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~--GEl~i 1923 (3956)
T PRK12467 1846 LEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVA--GELYL 1923 (3956)
T ss_pred CCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCc--eEEEe
Confidence 9999999888887778899999999999765543321 11234689999999999999999999999995 99998
Q ss_pred -----ecccCCCccccccccccccceeccccC-CCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 559 -----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 559 -----~~~y~~~~~~~~~~~~t~~~f~~~p~~-~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
+.||++ +++.|+++|..+|+. +|.|||||||+|+|++||.|+|+||+|||||++|+||+|+|||++|.
T Consensus 1924 ~G~~v~~GYl~------~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~ 1997 (3956)
T PRK12467 1924 GGVGLARGYLN------RPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLR 1997 (3956)
T ss_pred ccccccccccC------ChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHH
Confidence 456666 667899999999985 47899999999999999999999999999999999999999999995
Q ss_pred ccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCC--------CHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchh
Q 004952 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS--------QPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKL 703 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~--------~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKv 703 (722)
+||+|.+|+|++.+ ..++ ++++|||++.++... ..++++++|+++||.||+| .++.+++||+|+||||
T Consensus 1998 -~~p~V~~a~vv~~~-~~~~-~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKi 2074 (3956)
T PRK12467 1998 -EQGGVREAVVIAQD-GANG-KQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKL 2074 (3956)
T ss_pred -hCCCcceEEEEEec-CCCC-cEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCc
Confidence 99999999999986 3344 799999998754321 2468999999999999999 5669999999999999
Q ss_pred hHHHHHHHHh
Q 004952 704 LRRVLRDQIK 713 (722)
Q Consensus 704 dR~~L~~~~~ 713 (722)
||++|++...
T Consensus 2075 dr~~L~~~~~ 2084 (3956)
T PRK12467 2075 DRKALPAPDA 2084 (3956)
T ss_pred chhhCCCCcc
Confidence 9999987543
No 4
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-84 Score=864.38 Aligned_cols=632 Identities=16% Similarity=0.156 Sum_probs=510.2
Q ss_pred CChhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCC--------CCCccCC
Q 004952 18 LKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKG--------PPLYWFP 88 (722)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 88 (722)
+..++..+|.++|+++++. +.+++||++||++ |++.++..+ .+ + |++++++++.... ..+...+
T Consensus 2935 ~~~~~~~~~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~~~~~~-~~---l--f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3007 (3956)
T PRK12467 2935 ASPRAEQTVSDWLQQVQAQNLALREFEHTPLAD-IQRWAGQGG-EA---L--FDSILVFENYPISEALKQGAPSGLRFGA 3007 (3956)
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHhhccCC-CC---C--cceEEEeecCCchhhhhccCCCCceeec
Confidence 3455677888888888777 6666999999999 999987432 33 4 5666666553211 1111111
Q ss_pred C-ccccccccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCC
Q 004952 89 S-LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHG 164 (722)
Q Consensus 89 ~-~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~ 164 (722)
. .....+|+|++.+.. ++.+...+ |+. ++|++.+++++.++|.++|+++...++.+...+ +...+.....
T Consensus 3008 ~~~~~~~~~~l~l~~~~-~~~~~~~~~y~~-----~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~~~~~~~~ 3081 (3956)
T PRK12467 3008 VSSREQTNYPLTLAVGL-GDTLELEFSYDR-----QHFDAAAIERLAESFDRLLQAMLNNPAARLGELPTLAAHERRQVL 3081 (3956)
T ss_pred ccccccccCceEEEecc-CcceeEEEEech-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccCCCHHHHHHHH
Confidence 1 123467888887654 44666666 888 999999999999999999999988888776654 3333333334
Q ss_pred CCcCCCCccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcC
Q 004952 165 GTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMP 241 (722)
Q Consensus 165 ~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~ 241 (722)
..|+..........+++. ..+++++||++|+++.+. ++||+||+++++++|++|++. +++|++|+|+++
T Consensus 3082 ~~~~~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~ 3153 (3956)
T PRK12467 3082 HAWNATAAAYPSERLVHQLIEAQVARTPEAPALVFGDQ--------QLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVE 3153 (3956)
T ss_pred HhhccCCCCCCccccHHHHHHHHHHhCCCcceEeeCCc--------ccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeC
Confidence 578765444333334433 246689999999999887 999999999999999999999 999999999999
Q ss_pred CCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCC
Q 004952 242 MTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV 321 (722)
Q Consensus 242 ~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (722)
||+++++++|||+|+|++|||+||.+|.+++.+++++++++++|++....... + .......+.+..
T Consensus 3154 ~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~---~------~~~~~~~~~~~~----- 3219 (3956)
T PRK12467 3154 RSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQL---P------APAGDTALTLDR----- 3219 (3956)
T ss_pred CCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhc---c------cccCCceeeecc-----
Confidence 99999999999999999999999999999999999999999999987542110 0 000111111110
Q ss_pred CCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEE
Q 004952 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYC 401 (722)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l 401 (722)
..... .....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|+++
T Consensus 3220 -------------~~~~~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l 3282 (3956)
T PRK12467 3220 -------------LDLNG----YSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVL 3282 (3956)
T ss_pred -------------hhhcc----cCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEE
Confidence 00000 0111222345689999999999999999999999999999999998999999999999
Q ss_pred EecCccccchhHHHHHHhhcCCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeec
Q 004952 402 WPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (722)
Q Consensus 402 ~~~~~~~~~~~~~~~~~L~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~G 480 (722)
+++|++|+.+++++|.+|+.|++++++++ ..++..+++.|++++||++.++|++++.|++.. ...++++||.+++||
T Consensus 3283 ~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~--~~~~~~~lr~~~~gG 3360 (3956)
T PRK12467 3283 LFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA--GGADCASLDIYVFGG 3360 (3956)
T ss_pred EecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc--cccCCCCceEEEEec
Confidence 99999999999999999999999999883 257889999999999999999999999998753 234578999999999
Q ss_pred CCCCcchHHHHHhhccCCcccccccccccccccccCCcCC----cCccccccccCCCceEEEECCCCCcCCCCCCccceE
Q 004952 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEV 556 (722)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel 556 (722)
|++++++.+++.+.+++++++|.||+||+++.++...... .....++|+|++|++++|+|++++++|.|++ |||
T Consensus 3361 e~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~--GEL 3438 (3956)
T PRK12467 3361 EAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVA--GEL 3438 (3956)
T ss_pred CCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCC--ceE
Confidence 9999999998888777888999999999987655432211 1234689999999999999999999999996 999
Q ss_pred EE-----ecccCCCccccccccccccceecccc-CCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHH
Q 004952 557 GL-----FPLYLGASDRLLNADHEEVYFRGMPM-YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERV 630 (722)
Q Consensus 557 ~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~-~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~ 630 (722)
+| +.||++ +++.|+++|..+|+ .+|.|||||||+|+|++||+|+|+||+|+|||++|+||+|+|||++
T Consensus 3439 ~i~G~~v~~GY~~------~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~ 3512 (3956)
T PRK12467 3439 YIGGVGLARGYHQ------RPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEAR 3512 (3956)
T ss_pred EEcchhhhhhccC------CcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHH
Confidence 98 456666 67799999999998 6789999999999999999999999999999999999999999999
Q ss_pred HhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHH
Q 004952 631 CDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 631 l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~ 709 (722)
|. +||+|.+|+|++..+. .+ ++++|||++..+.....++++++|+++||.||+| .++.+++||+|+||||||++|+
T Consensus 3513 l~-~~p~V~~a~v~~~~~~-~~-~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~ 3589 (3956)
T PRK12467 3513 LL-QHPSVREAVVLARDGA-GG-KQLVAYVVPADPQGDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALP 3589 (3956)
T ss_pred Hh-hCcccceEEEEEecCC-CC-cEEEEEEeCCCCCcccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcC
Confidence 95 9999999999987543 45 7999999988755566789999999999999999 5669999999999999999998
Q ss_pred HHHhh
Q 004952 710 DQIKH 714 (722)
Q Consensus 710 ~~~~~ 714 (722)
+....
T Consensus 3590 ~~~~~ 3594 (3956)
T PRK12467 3590 DPDAK 3594 (3956)
T ss_pred CCCcc
Confidence 76443
No 5
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-80 Score=712.61 Aligned_cols=579 Identities=20% Similarity=0.261 Sum_probs=458.6
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEe
Q 004952 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (722)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (722)
.+|+-++++++++++.||..+.+.+ ..|.+++.++++. .....+||.++.+|.++++++++.....+||++|+++.
T Consensus 8 ~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~---~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~~ 83 (647)
T PTZ00237 8 FDYENDSNYANSNPESFWDEVAKKY-VHWDKMYDKVYSG---DEIYPDWFKGGELNTCYNVLDIHVKNPLKRDQDALIYE 83 (647)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHhc-CeeeCCcccccCC---CCCchhhCCCCeeeHHHHHHHHhhcccCCCCceEEEEE
Confidence 5678899999999999999999987 6999999999864 22347999999999999999886522237999999986
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHH
Q 004952 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (722)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~ 277 (722)
.+. .+..+++||+||.++++++|+.|++. |++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++
T Consensus 84 ~~~--~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~ 161 (647)
T PTZ00237 84 CPY--LKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIE 161 (647)
T ss_pred cCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 441 12246899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeccchhcCCccccchHHHhhcC------CCcEEEEcCCCCC--C------CCCCCCCCCCHHHHhcccCCCC
Q 004952 278 VSKAKGIFTQDFILRGGRKFPLYSKVLGAA------PLKAIVLPAIGND--V------GIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
+++++++|+++...+.++.++....+.+.. ..+++++...... . .....+....|++++.......
T Consensus 162 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (647)
T PTZ00237 162 TITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENN 241 (647)
T ss_pred hcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhcccc
Confidence 999999999876655555544443332221 1233333211100 0 0001113355777654321100
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChH-HHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~-~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (722)
...........+++++||+|||||||+||||+++|++ +.+........+....++++++.++++|..+...++.+|+.|
T Consensus 242 ~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G 321 (647)
T PTZ00237 242 QSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLG 321 (647)
T ss_pred CCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhCC
Confidence 1111223445789999999999999999999999998 444333334456778899999999999998777789999999
Q ss_pred CEEEEecCCC-C----hhhHHHHHHHhCCcEEechhHHHHHHHhcCC-----CCCCCccceeEEEeecCCCCcchHHHHH
Q 004952 423 ATLALYQGSP-L----ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----LEGLDWTKIRSFASTGETSNVDDDLWLS 492 (722)
Q Consensus 423 ~~lv~~~~~~-~----~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~-----~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~ 492 (722)
++++++++.. . +..+++.|++++||++.++|++++.|++... ....++++||.+++|||++++++.+++.
T Consensus 322 ~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~ 401 (647)
T PTZ00237 322 NTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIE 401 (647)
T ss_pred cEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHH
Confidence 9999987632 2 4679999999999999999999999987532 1345789999999999999999999998
Q ss_pred hhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEec----ccCCCccc
Q 004952 493 SKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFP----LYLGASDR 568 (722)
Q Consensus 493 ~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~----~y~~~~~~ 568 (722)
+.+ +++++|.||+||++++++..........+++|+|++|++++|+|++|+++|.|+. |||++.. +++. .+
T Consensus 402 ~~~-g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~--GEl~v~~p~~p~~~~--gy 476 (647)
T PTZ00237 402 NKL-KIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNEI--GEVAFKLPMPPSFAT--TF 476 (647)
T ss_pred Hhc-CCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCCc--eEEEEeccCCchhhC--ce
Confidence 776 5899999999999865543332222334789999999999999999999999985 9999952 2221 12
Q ss_pred cccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecC
Q 004952 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (722)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~ 648 (722)
+.+++.+.++|...+ | ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||.|.+|+|+++++
T Consensus 477 ~~~~~~~~~~f~~~~---g--~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~-~~p~V~eaavvg~~~ 550 (647)
T PTZ00237 477 YKNDEKFKQLFSKFP---G--YYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSIL-KHPLVLECCSIGIYD 550 (647)
T ss_pred eCCHHHHHHHHhCCC---C--EEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHH-hCCCceeeEEEeeEc
Confidence 234556666775432 3 9999999999999999999999999999999999999999996 999999999999999
Q ss_pred CCCCceEEEEEEEecCCC---CCCH----HHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 649 AGGGPEVLVIFVVLKKGF---TSQP----DKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~---~~~~----~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+..| +.++|||+++++. ..+. ++|+++++++|+.+++|+ ++++++||+|+||||+|+.|++++.++
T Consensus 551 ~~~g-~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~ 624 (647)
T PTZ00237 551 PDCY-NVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDS 624 (647)
T ss_pred CCCC-CEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCC
Confidence 9888 8999999998532 2333 456778888899999995 559999999999999999999998654
No 6
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1e-82 Score=858.57 Aligned_cols=624 Identities=19% Similarity=0.215 Sum_probs=513.5
Q ss_pred ChhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCCC----CCccC--CCcc
Q 004952 19 KLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP----PLYWF--PSLD 91 (722)
Q Consensus 19 ~~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~ 91 (722)
..++..+|.+.|+++.+. ..+++||++||++ |++.++++++.+.+|+ ||++|++++..... ...+. ....
T Consensus 2896 ~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2972 (5163)
T PRK12316 2896 QVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMYNHQSGERAAAQLPGLHIESFAWDG 2972 (5163)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhccccccCCCCc--eeEEEeeeccccccccCCCceeEeeeccC
Confidence 445667888888888877 5666999999999 9999999988888888 89999887643221 11111 1123
Q ss_pred ccccccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCCCCcC
Q 004952 92 QSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHGGTWL 168 (722)
Q Consensus 92 ~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~w~ 168 (722)
...++||.+.+.+.++++...+ |+. ++|++.+++++.++|.++|+++...++.+...+ ++..+.......|+
T Consensus 2973 ~~~~~dL~l~v~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~~~~~~~~~ 3047 (5163)
T PRK12316 2973 AATQFDLALDTWESAEGLGASLTYAT-----DLFDARTVERLARHWQNLLRGMVENPQRSVDELAMLDAEERGQLLEAWN 3047 (5163)
T ss_pred CccceeeEEEEEecCCcEEEEEEECc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccCCCHHHHHHHHHHhC
Confidence 4567899888877777787787 988 999999999999999999999988887776654 33333223334576
Q ss_pred CCCccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH
Q 004952 169 PGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245 (722)
Q Consensus 169 ~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~ 245 (722)
..........+++. ..+++++|+++|+.+.++ .+||+||+++++++|++|++. +++|++|+|++++|++
T Consensus 3048 ~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l~~~~s~~ 3119 (5163)
T PRK12316 3048 ATAAEYPLERGVHRLFEEQVERTPDAVALAFGEQ--------RLSYAELNRRANRLAHRLIERGVGPDVLVGVAVERSLE 3119 (5163)
T ss_pred CCCcCCCCcCCHHHHHHHHHHhCCCCeeEeeCCe--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHH
Confidence 55433333334443 346689999999999887 999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCC
Q 004952 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPL 325 (722)
Q Consensus 246 ~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (722)
+++++|||+|+|++|||+||++|.+|+.+++++++++++++++.. .++ ......++.+....
T Consensus 3120 ~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~-----~~~------~~~~~~~~~~~~~~------- 3181 (5163)
T PRK12316 3120 MVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHL-----RLP------LAQGVQVLDLDRGD------- 3181 (5163)
T ss_pred HHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCccc-----cCC------ccCCccEEEecccc-------
Confidence 999999999999999999999999999999999999999998642 000 00011122221100
Q ss_pred CCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecC
Q 004952 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (722)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~ 405 (722)
.. .....+.....++++|||+|||||||+||||+++|+++.+.+.+....++++++|+++++++
T Consensus 3182 -----------~~-----~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~ 3245 (5163)
T PRK12316 3182 -----------EN-----YAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGDRVLQFTT 3245 (5163)
T ss_pred -----------cc-----ccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCcccEEEeecC
Confidence 00 00112223456799999999999999999999999999999999989999999999999999
Q ss_pred ccccchhHHHHHHhhcCCEEEEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCC
Q 004952 406 LGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETS 483 (722)
Q Consensus 406 ~~~~~~~~~~~~~L~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l 483 (722)
++||.+++++|.+|++|+++++.+.. .++..+.+.++++++|++.++|++++.+.+.. ....+++||.+++|||++
T Consensus 3246 ~~fd~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~--~~~~~~~lr~~~~gGe~l 3323 (5163)
T PRK12316 3246 FSFDVFVEELFWPLMSGARVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEE--DAHRCTSLKRIVCGGEAL 3323 (5163)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc--ccccCCcceEEEEccccC
Confidence 99999999999999999999998643 36778999999999999999999999998653 233468999999999999
Q ss_pred CcchHHHHHhhccCCcccccccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE----
Q 004952 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL---- 558 (722)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v---- 558 (722)
++++.++|.. +.+++|.||+||++++++..... ......+||+|++|++++|+|++++++|+|++ |||+|
T Consensus 3324 ~~~~~~~~~~---~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--GEl~i~G~~ 3398 (5163)
T PRK12316 3324 PADLQQQVFA---GLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL--GELYLGGEG 3398 (5163)
T ss_pred CHHHHHHHHh---CCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC--ceEEecccc
Confidence 9999888872 56899999999999876554432 22345799999999999999999999999995 99998
Q ss_pred -ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCC
Q 004952 559 -FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADES 637 (722)
Q Consensus 559 -~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~ 637 (722)
+.||++ +++.|+++|..+|+.+|.|||||||+|||++||.|+|+||+|+|||++|+||+|+|||++|. +||+
T Consensus 3399 v~~GY~~------~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G~rIel~eIE~~l~-~~~~ 3471 (5163)
T PRK12316 3399 LARGYHN------RPGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRGFRIELGEIEARLL-EHPW 3471 (5163)
T ss_pred cchhcCC------ChhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEeeCcEeeChHHHHHHHH-hCCC
Confidence 456666 67799999999999889999999999999999999999999999999999999999999995 9999
Q ss_pred cceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHH
Q 004952 638 ILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQ 711 (722)
Q Consensus 638 V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~ 711 (722)
|.+|+|++.. + ++++|||++..+.....++++++|+++||.||+| .++.+++||+|+|||+||++|++.
T Consensus 3472 V~~a~v~~~~----~-~~l~a~vv~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKvdr~~L~~~ 3541 (5163)
T PRK12316 3472 VREAVVLAVD----G-RQLVAYVVPEDEAGDLREALKAHLKASLPEYMVPAHLLFLERMPLTPNGKLDRKALPRP 3541 (5163)
T ss_pred cceEEEEEcc----C-CeEEEEEEcCCcCcccHHHHHHHHHhhCCcccCcceeeeHhhcCCCCCcchhHHhcCCC
Confidence 9999998875 3 7899999987655555688999999999999999 566999999999999999999764
No 7
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-82 Score=855.65 Aligned_cols=634 Identities=20% Similarity=0.210 Sum_probs=517.2
Q ss_pred CChhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCC-------CCCc--cC
Q 004952 18 LKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKG-------PPLY--WF 87 (722)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~ 87 (722)
+...+..+|.+.++++.+. ..+++||++||++ +++.|++.+..+..|+ ||+++++++.... .... ..
T Consensus 346 ~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (5163)
T PRK12316 346 SVFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVEALKVERSLSHSPL--FQVMYNHQPLVADIEALDTVAGLEFGQL 422 (5163)
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhCCCCCCCCCCc--EEEEEEeecccccccccccCCCceEEee
Confidence 3445566788888888877 5566999999999 9999999988888888 9999998753211 1111 11
Q ss_pred CCccccccccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCC
Q 004952 88 PSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHG 164 (722)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~ 164 (722)
+......++||.+.+.+.++++...+ |+. ++|++++++++.++|.++|+++...++.+..++ +...+.....
T Consensus 423 ~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~~~~~~~ 497 (5163)
T PRK12316 423 EWKSRTTQFDLTLDTYEKGGRLHAALTYAT-----DLFEARTVERMARHWQNLLRGMVENPQARVDELPMLDAEERGQLV 497 (5163)
T ss_pred ccCCCccceeEEEEEEEcCCcEEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhccccccccCCCCCHHHHHHHH
Confidence 22234568898888877778888888 988 999999999999999999999988888877664 3333222223
Q ss_pred CCcCCCCccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcC
Q 004952 165 GTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMP 241 (722)
Q Consensus 165 ~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~ 241 (722)
..|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|+.|++. +++|++|+|+++
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~~~--------~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~ 569 (5163)
T PRK12316 498 EGWNATAAEYPLQRGVHRLFEEQVERTPEAPALAFGEE--------TLDYAELNRRANRLAHALIERGVGPDVLVGVAME 569 (5163)
T ss_pred HHhcCccccCCCCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC
Confidence 345543322111223332 235689999999998777 999999999999999999999 999999999999
Q ss_pred CCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCC
Q 004952 242 MTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDV 321 (722)
Q Consensus 242 ~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (722)
|++++++++|||+|+|++|+|+||.+|.+++.+++++++++++|++....... + .......+.+...
T Consensus 570 ~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~---~------~~~~~~~~~~~~~---- 636 (5163)
T PRK12316 570 RSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKL---P------LAAGVQVLDLDRP---- 636 (5163)
T ss_pred CCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhC---C------cccCceEEEecCc----
Confidence 99999999999999999999999999999999999999999999987532110 0 0001111222100
Q ss_pred CCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEE
Q 004952 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYC 401 (722)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l 401 (722)
....... ....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++++++
T Consensus 637 -----------~~~~~~~-----~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l 700 (5163)
T PRK12316 637 -----------AAWLEGY-----SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVL 700 (5163)
T ss_pred -----------chhhccC-----CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 0000000 011122345679999999999999999999999999999999999999999999999
Q ss_pred EecCccccchhHHHHHHhhcCCEEEEecC--CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEee
Q 004952 402 WPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (722)
Q Consensus 402 ~~~~~~~~~~~~~~~~~L~~G~~lv~~~~--~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~ 479 (722)
+++|++|+++++++|.+|++|+++++++. ..++..+++.|++++||++.++|++++.|++... ..++++||.+++|
T Consensus 701 ~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~g 778 (5163)
T PRK12316 701 QKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCS 778 (5163)
T ss_pred eeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEe
Confidence 99999999999999999999999999864 3578899999999999999999999999987532 3357899999999
Q ss_pred cCCCCcchHHHHHhhccCCcccccccccccccccccCCc-CCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE
Q 004952 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (722)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (722)
||++++++.+++...+++++++|.||+||+++.++.... .......++|+|++|++++|+|++++++|.|+. |||+|
T Consensus 779 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--GEl~i 856 (5163)
T PRK12316 779 GEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVL--GELYL 856 (5163)
T ss_pred eccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCc--eEEEe
Confidence 999999999998888888899999999999864433322 223345689999999999999999999999995 99998
Q ss_pred -----ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhc
Q 004952 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (722)
Q Consensus 559 -----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (722)
+.||++ +++.|++.|..+|+.+|.|||+|||+|++++||.|+|+||+|||||++|+||+|+|||++|.
T Consensus 857 ~G~~v~~GYl~------~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~- 929 (5163)
T PRK12316 857 AGRGLARGYHG------RPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLL- 929 (5163)
T ss_pred cccccChhhCC------ChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHH-
Confidence 356665 67789999999998888999999999999999999999999999999999999999999995
Q ss_pred cCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHH
Q 004952 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQI 712 (722)
Q Consensus 634 ~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~ 712 (722)
+||+|.+|+|++.+ + +.++|||++.++.....++++++++++||.||+| .++++++||+|+||||||++|++..
T Consensus 930 ~~p~V~~a~V~~~~----~-~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 930 EHPWVREAAVLAVD----G-KQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred hCCCcceEEEEEcC----C-CeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 99999999999986 4 7899999998766667789999999999999999 4669999999999999999998754
No 8
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4.2e-79 Score=703.19 Aligned_cols=572 Identities=23% Similarity=0.363 Sum_probs=458.4
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEec
Q 004952 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWRE 199 (722)
Q Consensus 120 ~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~ 199 (722)
+|+.+++++++++..||..+++. +.|.+++.++++.. ..+..+||.++.+|.++++++++. +++|+++|+++.+
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~~ 75 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARR--IDWQTPPQRILDYS--NPPFARWFAGGRTNLCHNALDRHL--DERGEQLALVTVS 75 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHh--CCeecCCcccccCC--CCCcCccCCCCEeeHHHHHHHHHh--CcCCCCeEEEEEc
Confidence 46888999999999999999997 57999999987542 235679999999999999998764 6789999999854
Q ss_pred CCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHh
Q 004952 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRV 278 (722)
Q Consensus 200 ~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~ 278 (722)
. +.+..+++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.+++++
T Consensus 76 ~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~ 153 (628)
T TIGR02316 76 S--ETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDD 153 (628)
T ss_pred C--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHh
Confidence 2 122345899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEeccchhcCCccccchHHHhh---c---CCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCcc
Q 004952 279 SKAKGIFTQDFILRGGRKFPLYSKVLG---A---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (722)
Q Consensus 279 ~~~~~il~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (722)
++++++|+++...++++.++....+.+ . ....++++...... ..........|.++...... ...+...
T Consensus 154 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 228 (628)
T TIGR02316 154 ATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP-MRLIPGRDVDYAALRTQHED----AQVPVEW 228 (628)
T ss_pred cCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC-cCcccCccccHHHHhhcccc----CCCCcee
Confidence 999999999877666666555443322 1 12334444321111 00111123456665543211 1122233
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHH-HHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEecC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~ 430 (722)
..+++++||+|||||||.||||+++|++++. ........++++++|++++.++++|+.+. +.++.+|+.|++++++++
T Consensus 229 ~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~ 308 (628)
T TIGR02316 229 LESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEG 308 (628)
T ss_pred cCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCC
Confidence 5679999999999999999999999999753 44455566889999999999999999986 678899999999999875
Q ss_pred C---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccccc
Q 004952 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (722)
Q Consensus 431 ~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG 505 (722)
. .++..++++|++++||+++++|++++.|.+... ....++++||.+++|||++++++.+++...+ +.+++|.||
T Consensus 309 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG 387 (628)
T TIGR02316 309 LPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYW 387 (628)
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEeccc
Confidence 3 367789999999999999999999999987643 2355789999999999999999998887765 578999999
Q ss_pred ccccccccccCCc---CCcCccccccccCCCceEEEECC-CCCcCCCCCCccceEEEe-c---ccCCCcccccccccccc
Q 004952 506 GTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLF-P---LYLGASDRLLNADHEEV 577 (722)
Q Consensus 506 ~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v~-~---~y~~~~~~~~~~~~t~~ 577 (722)
+||++..++.... ..+...+++|+|++|++++|+|+ +|+++|.|+. |||++. | +|+.+ ++.+++.+.+
T Consensus 388 ~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~--Gel~v~gp~~~g~~~~--~~~~~~~~~~ 463 (628)
T TIGR02316 388 QTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEK--GVLTVVPPLPPGCLST--VWGDDARFLK 463 (628)
T ss_pred ccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCc--EEEEEecCCCcccccc--ccCChHHHHH
Confidence 9999854433222 12334578899999999999997 7999999985 999994 3 33331 1223332222
Q ss_pred -ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEE
Q 004952 578 -YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (722)
Q Consensus 578 -~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l 656 (722)
+|... +++||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.+
T Consensus 464 ~~~~~~----~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~-~~p~V~ea~Vvg~~d~~~g-~~~ 537 (628)
T TIGR02316 464 TYWSHF----KRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS-SHPSVAEVAVVGVHDELKG-QVA 537 (628)
T ss_pred hhhhcC----CCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeeecCCCC-eEE
Confidence 22211 2459999999999999999999999999999999999999999995 9999999999999999888 899
Q ss_pred EEEEEecCCCCC--------CHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 657 VIFVVLKKGFTS--------QPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 657 ~a~vv~~~~~~~--------~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
++||+++++... ..++|+++++++|+.|++|. ++++++||+|+|||++|+.|++++.+.
T Consensus 538 ~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~ 605 (628)
T TIGR02316 538 VVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR 605 (628)
T ss_pred EEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC
Confidence 999998875432 23679999999999999995 559999999999999999999987654
No 9
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.3e-81 Score=785.94 Aligned_cols=654 Identities=16% Similarity=0.133 Sum_probs=493.6
Q ss_pred CChhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCCCCCccCCCccccccc
Q 004952 18 LKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSLDQSKLT 96 (722)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (722)
+..++..+|.++++++.+. ..+++||++||++ |++.+++.++...+|.+ |+++|..+...... .+ ....++
T Consensus 86 ~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~~~~~~p~l-f~~~~~~~~~~~~~--~~----~~~~~~ 157 (1389)
T TIGR03443 86 LNITPELSFLQLYAKVSEEEKEGASDIGVPFDE-LSEHIQAAKKLERTPPL-FRLAFQDAPDNQQT--TY----STGSTT 157 (1389)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccCCCCCCcc-EEEEeecCCccccc--cc----ccCCcc
Confidence 3456677888888888877 6666999999999 99999988766666522 56544432211110 11 344678
Q ss_pred cHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCC-----CCCcC
Q 004952 97 NLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH-----GGTWL 168 (722)
Q Consensus 97 ~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~-----~~~w~ 168 (722)
||.+.+.+.++++...+ |+. ++|++.+++++.++|..+|+++...++.+..++ +...+.... ...|.
T Consensus 158 dl~~~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 232 (1389)
T TIGR03443 158 DLTVFLTPSSPELELSIYYNS-----LLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSLLPDPTKDLDWS 232 (1389)
T ss_pred ceEEEEEecCCcEEEEEEEch-----hcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhhhhccccccCcC
Confidence 88888877777888888 988 999999999999999999999988888877654 222221111 11232
Q ss_pred CCCccchhhhcccCcccCCCCCCceEEEEecCCC-CCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHH
Q 004952 169 PGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRA 246 (722)
Q Consensus 169 ~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~ 246 (722)
.. .......+. .+++++||++|+++..... .....+++||+||+++++++|++|++. +++||+|+|+++|++++
T Consensus 233 ~~--~~~l~~~~~--~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~ 308 (1389)
T TIGR03443 233 GF--RGAIHDIFA--DNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL 308 (1389)
T ss_pred cc--cCcHHHHHH--HHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH
Confidence 11 011122233 3457899999998642210 011234899999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC-----CCcEEEEcCCCCCC
Q 004952 247 VIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-----PLKAIVLPAIGNDV 321 (722)
Q Consensus 247 vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 321 (722)
++++|||+|+|++|+|+||.+|.+++.+++++++++++++..... ............. ....+.+......
T Consensus 309 i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 384 (1389)
T TIGR03443 309 VVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAG---TLDQLVRDYIDKELELRTEIPALALQDDGSL- 384 (1389)
T ss_pred HHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEecccc---ccchhhhhhhhcccccccccceEEecccccc-
Confidence 999999999999999999999999999999999999999876421 0001111111000 0001111100000
Q ss_pred CCCCCCCCCC--HHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCE
Q 004952 322 GIPLREQDLS--WKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (722)
Q Consensus 322 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~ 399 (722)
..+... ..+....... ...........++++|||+|||||||.||||+++|+++++.+.+....+++.++|+
T Consensus 385 ----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~ 458 (1389)
T TIGR03443 385 ----VGGSLEGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDK 458 (1389)
T ss_pred ----cccccccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCE
Confidence 000000 0011100000 00001122346799999999999999999999999999999988888899999999
Q ss_pred EEEecCccccchhHHHHHHhhcCCEEEEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEE
Q 004952 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFA 477 (722)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~ 477 (722)
++++++++|+.+++++|.+|+.|+++++++.. .++..+.+.|++++||++.++|++++.|.... ...+++||.++
T Consensus 459 ~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~ 535 (1389)
T TIGR03443 459 FTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAF 535 (1389)
T ss_pred EEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEE
Confidence 99999999999999999999999999998643 25678999999999999999999999987543 23478999999
Q ss_pred eecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCC----------cCccccccccCCCceEEEECCC--CCc
Q 004952 478 STGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDEC--GVP 545 (722)
Q Consensus 478 ~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~~~vld~~--~~~ 545 (722)
+|||++++....++....++++++|.||+||++++++...... .....++|+|+++++++|+|++ +++
T Consensus 536 ~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~ 615 (1389)
T TIGR03443 536 FVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQT 615 (1389)
T ss_pred EecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCc
Confidence 9999999998888877777889999999999986554322110 1124689999999999999964 578
Q ss_pred CCCCCCccceEEE-----ecccCCCccccccccccccceeccccC----------------------CCceecccCceEE
Q 004952 546 YPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY----------------------KGMCLRRHGDIIK 598 (722)
Q Consensus 546 ~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~----------------------~g~r~yrTGDl~~ 598 (722)
+|.|++ |||+| +.||++ +++.|+++|..+|+. ++.+||+|||+|+
T Consensus 616 ~~~G~~--GEL~i~G~~v~~GY~~------~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~ 687 (1389)
T TIGR03443 616 CGVGEV--GEIYVRAGGLAEGYLG------LPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGR 687 (1389)
T ss_pred CCCCCc--eEEEecccccchhcCC------ChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCcee
Confidence 999995 99998 356665 667888899766531 3468999999999
Q ss_pred EecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC-CC---------
Q 004952 599 RTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-TS--------- 668 (722)
Q Consensus 599 ~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~-~~--------- 668 (722)
+++||+|+|+||.|||||++|+||+|+|||++|. +||.|.+++|++.++...+ +.+++|+++..+. ..
T Consensus 688 ~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~-~~p~V~~a~v~~~~~~~~~-~~lva~vv~~~~~~~~~~~~~~~~~ 765 (1389)
T TIGR03443 688 YLPDGNVECCGRADDQVKIRGFRIELGEIDTHLS-QHPLVRENVTLVRRDKDEE-PTLVSYIVPQDKSDELEEFKSEVDD 765 (1389)
T ss_pred EcCCCCEEEecccCCEEEeCcEEecHHHHHHHHH-hCcchheeEEEEeeCCCCC-eEEEEEEeccCcccccccccccccc
Confidence 9999999999999999999999999999999995 9999999999998887666 8999999986321 10
Q ss_pred ----------------CHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHH
Q 004952 669 ----------------QPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQ 711 (722)
Q Consensus 669 ----------------~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~ 711 (722)
..++++++|+++||.||+|. ++.+++||+|+||||||++|++.
T Consensus 766 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~ 825 (1389)
T TIGR03443 766 EESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFP 825 (1389)
T ss_pred ccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCC
Confidence 13578999999999999994 66999999999999999999754
No 10
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.4e-79 Score=704.22 Aligned_cols=578 Identities=23% Similarity=0.334 Sum_probs=458.1
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCe--eeccCCCC---CCCCCCcCCCCccchhhhcccCcccCCCCCCce
Q 004952 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPK--CILDRTDK---SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (722)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~--~~l~~~~~---~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~ 193 (722)
.+|+.++++++++++.||..+.+.+ .|..++. ++++.... ..+..+||.++.+|.++++++++. .+.+|+++
T Consensus 30 ~~y~~~~~~s~~~~~~fw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~~~~~l~~~~-~~~~~~~~ 106 (666)
T PLN02654 30 QQYMEMYKRSVDDPAGFWSDIASQF--YWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNICYNCLDRNV-EAGNGDKI 106 (666)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhC--CeecCCCcceEeccCCCcccCCccccccCCCEeeHHHHHHHHhh-ccCCCCCE
Confidence 4678899999999999999999984 5777763 56532111 123579999999999999998864 12489999
Q ss_pred EEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHH
Q 004952 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (722)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l 272 (722)
|+++.+. +.+..+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++.+++
T Consensus 107 Al~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l 184 (666)
T PLN02654 107 AIYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESL 184 (666)
T ss_pred EEEEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHH
Confidence 9998543 122345899999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEeccchhcCCccccchHHHhhcCC---------CcEEEEcCCCCC--CCCC-CCCCCCCHHHHhcccC
Q 004952 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---------LKAIVLPAIGND--VGIP-LREQDLSWKDFLSSVD 340 (722)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~ 340 (722)
.+++++++++++|+++...++++.++....+..... ..++........ .... .......|+++.....
T Consensus 185 ~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (666)
T PLN02654 185 AQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP 264 (666)
T ss_pred HHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC
Confidence 999999999999999887766666554433322111 011111111000 0000 0112234555543211
Q ss_pred CCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHH-HHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHH
Q 004952 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (722)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (722)
...+.....++|++||+|||||||+||||+++|++++. ........++++++|++++.++++|.++. +.++++
T Consensus 265 -----~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 339 (666)
T PLN02654 265 -----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGP 339 (666)
T ss_pred -----CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHH
Confidence 11223345779999999999999999999999999764 34445567889999999999999999987 567899
Q ss_pred hhcCCEEEEecCC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHh
Q 004952 419 FLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (722)
Q Consensus 419 L~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 493 (722)
|+.|++++++++. +++..++++|++++||++.++|++++.|.+... ....++++||.++++||+++++..+|+.+
T Consensus 340 L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 419 (666)
T PLN02654 340 MLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFN 419 (666)
T ss_pred HHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHH
Confidence 9999999999753 367899999999999999999999999988653 24457899999999999999999999988
Q ss_pred hccC--CcccccccccccccccccCCc-CCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccc
Q 004952 494 KAWY--NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLL 570 (722)
Q Consensus 494 ~~~~--~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~ 570 (722)
.++. +++.+.||+||+++..+...+ ..+..++++|+|++|++++|+|++|++++.|+. |||++..++.+.+..|+
T Consensus 420 ~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~--Gel~v~~~~p~~~~gy~ 497 (666)
T PLN02654 420 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECS--GYLCVKKSWPGAFRTLY 497 (666)
T ss_pred HhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCc--eEEEEcCCCchhhhhhc
Confidence 8753 689999999999875544333 224566889999999999999999999998874 99999543222222233
Q ss_pred -cccccccc-eeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecC
Q 004952 571 -NADHEEVY-FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (722)
Q Consensus 571 -~~~~t~~~-f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~ 648 (722)
+++.+... |... +| ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|+++++
T Consensus 498 ~~~~~~~~~~~~~~---~g--~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaaVvg~~d 571 (666)
T PLN02654 498 GDHERYETTYFKPF---AG--YYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGIEH 571 (666)
T ss_pred CChHHHHHhhhhcC---CC--EEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEeeEc
Confidence 34444433 3321 23 9999999999999999999999999999999999999999996 999999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCCH---HHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 649 AGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+..| +.+++||+++++...+. ++|+++++++|+.+++|. ++++++||+|+|||++|+.|++++.++
T Consensus 572 ~~~g-e~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~ 641 (666)
T PLN02654 572 EVKG-QGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 641 (666)
T ss_pred CCCC-eEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC
Confidence 8888 89999999998765543 378888899999999995 558999999999999999999998764
No 11
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.1e-81 Score=843.43 Aligned_cols=627 Identities=16% Similarity=0.160 Sum_probs=496.9
Q ss_pred HHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCCC-------CCccCC-Cccccc
Q 004952 24 EEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-------PLYWFP-SLDQSK 94 (722)
Q Consensus 24 ~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~ 94 (722)
.++.++|+++++. ++.++||++||++ +++..+..+..++|+ +++++++..... ...... ......
T Consensus 3566 ~t~~~~L~~v~~~~~~~~~~q~~~l~~-i~~~~~~~~~~~LF~-----t~~v~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 3639 (4334)
T PRK05691 3566 CSVRQWLQGLLDSNMELREYEYLPLVA-IQECSELPKGQPLFD-----SLFVFENAPVEVSVLDRAQSLNASSDSGRTHT 3639 (4334)
T ss_pred CcHHHHHHHHHHHHHHHhhccCCCHHH-HHHHhcCCCCCCCcc-----EEEEeecCCcchhhhccccccccccccccccc
Confidence 4666666666665 6666999999999 998887666555554 445554432111 011001 112345
Q ss_pred cccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCCCCcCCCC
Q 004952 95 LTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHGGTWLPGS 171 (722)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~w~~~~ 171 (722)
+++|++.+.. ++.+...+ |++ ++|++.+++++.++|.++|+++...++.+...+ +...+.......|+...
T Consensus 3640 ~~~l~~~~~~-~~~l~~~l~y~~-----~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3713 (4334)
T PRK05691 3640 NFPLTAVCYP-GDDLGLHLSYDQ-----RYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPLLGEQERDFLLDGCNRSE 3713 (4334)
T ss_pred CCCeEEEEec-CCceEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCCCCHHHHHHHHHhhCCcc
Confidence 6677665433 33455566 887 999999999999999999999988887776664 33333333445677654
Q ss_pred ccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHH
Q 004952 172 VLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVI 248 (722)
Q Consensus 172 ~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv 248 (722)
.......+++. ..|++++||++|+++.+. ++||+||+++++++|++|++. |++|++|+|++++|+++++
T Consensus 3714 ~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v 3785 (4334)
T PRK05691 3714 RDYPLEQSYVRLFEAQVAAHPQRIAASCLDQ--------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLG 3785 (4334)
T ss_pred CCCccccCHHHHHHHHHHhCCCceEEEcCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH
Confidence 44444445544 356789999999999888 999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC---CcEEEEcCCCCCCCCCC
Q 004952 249 IYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDVGIPL 325 (722)
Q Consensus 249 ~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 325 (722)
++|||+|+|++||||||++|.+|+.+|+++++++++|+++..... ...+..... ...+++
T Consensus 3786 ~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~----------- 3848 (4334)
T PRK05691 3786 MIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQ------ARALLDELGCANRPRLLV----------- 3848 (4334)
T ss_pred HHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccch------hhhhhcccccccccceee-----------
Confidence 999999999999999999999999999999999999998754211 111111110 011111
Q ss_pred CCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecC
Q 004952 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (722)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~ 405 (722)
+++..... .+...+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|+++++++
T Consensus 3849 ------~~~~~~~~----~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s 3918 (4334)
T PRK05691 3849 ------WEEVQAGE----VASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTAS 3918 (4334)
T ss_pred ------eccccccc----ccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecC
Confidence 01110000 01112223456899999999999999999999999999999999888999999999999999
Q ss_pred ccccchhHHHHHHhhcCCEEEEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCC
Q 004952 406 LGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETS 483 (722)
Q Consensus 406 ~~~~~~~~~~~~~L~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l 483 (722)
++||.+++++|.+|+.|+++++++.. .++..+++.+++++||++.++|++++.++... ...+++||.+++|||++
T Consensus 3919 ~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l 3995 (4334)
T PRK05691 3919 QSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAM 3995 (4334)
T ss_pred CchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcC
Confidence 99999999999999999999998753 36788999999999999999999999987653 23478999999999999
Q ss_pred CcchHHHHHhhccCCcccccccccccccccccCCcC---CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE--
Q 004952 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (722)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-- 558 (722)
++++.+.|.+..++++++|.||+|||++.++..... ......++|+|++|++++|+|++++++|.|.. |||+|
T Consensus 3996 ~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~--GEL~i~G 4073 (4334)
T PRK05691 3996 PPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAV--GELCVAG 4073 (4334)
T ss_pred CHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCc--eEEEEec
Confidence 999999888888889999999999999765443221 12234689999999999999999999999995 99998
Q ss_pred ---ecccCCCccccccccccccceecccc-CCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhcc
Q 004952 559 ---FPLYLGASDRLLNADHEEVYFRGMPM-YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQA 634 (722)
Q Consensus 559 ---~~~y~~~~~~~~~~~~t~~~f~~~p~-~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~ 634 (722)
+.||++ +++.|+++|..+|+ .+|.|||||||+|||++||+|+|+||+|+|||++|+||+++|||++|. .
T Consensus 4074 ~~v~~GY~~------~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~-~ 4146 (4334)
T PRK05691 4074 TGVGRGYVG------DPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLH-E 4146 (4334)
T ss_pred ccccccccC------CcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHH-h
Confidence 456666 67799999999997 468899999999999999999999999999999999999999999995 9
Q ss_pred CCCcceeEEEeecCCCCCceEEEEEEEecCCCCC---CHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHH
Q 004952 635 DESILETAAISVSPAGGGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRD 710 (722)
Q Consensus 635 ~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~---~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~ 710 (722)
+|+|.+|+|+...+ ..+ +.++||++...+... ..++++.+|+++||+||+|. ++.+++||+|+||||||++|++
T Consensus 4147 ~~~v~~a~v~~~~~-~~~-~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~ 4224 (4334)
T PRK05691 4147 QAEVREAAVAVQEG-VNG-KHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPA 4224 (4334)
T ss_pred CCCccEEEEEEecC-CCC-cEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCC
Confidence 99999998876543 345 789999998764322 23679999999999999994 5689999999999999999987
Q ss_pred H
Q 004952 711 Q 711 (722)
Q Consensus 711 ~ 711 (722)
+
T Consensus 4225 ~ 4225 (4334)
T PRK05691 4225 L 4225 (4334)
T ss_pred C
Confidence 5
No 12
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3e-81 Score=780.22 Aligned_cols=629 Identities=19% Similarity=0.188 Sum_probs=487.8
Q ss_pred hhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCC---CCCccCC-Cccccc
Q 004952 20 LEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKG---PPLYWFP-SLDQSK 94 (722)
Q Consensus 20 ~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 94 (722)
..+..+|.++++++.+. ..+++||++||++ |++.++..+ ...++ |+++++++..... ....... ......
T Consensus 303 ~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~--~~~~l--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (1296)
T PRK10252 303 IAAQETLPELATRLAAQLKKMRRHQRYDAEQ-IVRDSGRAA--GDEPL--FGPVLNIKVFDYQLDFPGVQAQTHTLATGP 377 (1296)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhhcCCCHHH-HHHHhcCcc--CCCCc--eeEEEEeeecccccCcCCccceeeecCCCc
Confidence 34556777777777777 6666999999999 999997543 22334 5555655432211 1110000 001112
Q ss_pred cccHHHHHH-HhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCCCCcCCC
Q 004952 95 LTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHGGTWLPG 170 (722)
Q Consensus 95 ~~~l~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~w~~~ 170 (722)
.+|+++.+. ..++.+...+ |+. ++|++.+++++.++|..+|+++...++.+...+ +...+... ...|+..
T Consensus 378 ~~dl~l~~~~~~~~~l~~~~~y~~-----~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~~~-~~~~~~~ 451 (1296)
T PRK10252 378 VNDLELALFPDEHGGLSIEILANP-----QRYDEATLIAHAERLKALIAQFAADPALLCGDVDILLPGEYAQ-LAQVNAT 451 (1296)
T ss_pred cCCeEEEEEECCCCcEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHHHH-HHHhcCC
Confidence 346666554 2334566666 888 999999999999999999999987777766553 22221111 2334433
Q ss_pred CccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHH
Q 004952 171 SVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAV 247 (722)
Q Consensus 171 ~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~v 247 (722)
...... .++.. ..+++++||++|+++.+. .+||+||+++++++|++|.+. +++||+|+|+++++++++
T Consensus 452 ~~~~~~-~~l~~~~~~~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i 522 (1296)
T PRK10252 452 AVEIPE-TTLSALVAQQAAKTPDAPALADARY--------QFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLT 522 (1296)
T ss_pred CCCCCc-CCHHHHHHHHHHhCCCCeEEEcCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH
Confidence 222111 11211 234578999999998877 999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCC
Q 004952 248 IIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLRE 327 (722)
Q Consensus 248 v~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (722)
+++|||+++|++|+|+||++|.+++.+++++++++++++++........ .+. ..++
T Consensus 523 ~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~----------~~~-~~~~------------- 578 (1296)
T PRK10252 523 LALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFAD----------VPD-LTSL------------- 578 (1296)
T ss_pred HHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhccc----------CCC-ceee-------------
Confidence 9999999999999999999999999999999999999998753211100 000 0000
Q ss_pred CCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCcc
Q 004952 328 QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407 (722)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (722)
.+........ ..+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|++++.+|++
T Consensus 579 ---~~~~~~~~~~------~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 649 (1296)
T PRK10252 579 ---CYNAPLAPQG------AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCS 649 (1296)
T ss_pred ---eccccccccc------CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcc
Confidence 0000000000 0111223578999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHhhcCCEEEEecC--CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCC--CCCccceeEEEeecCCC
Q 004952 408 WVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFASTGETS 483 (722)
Q Consensus 408 ~~~~~~~~~~~L~~G~~lv~~~~--~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~Lr~i~~~Ge~l 483 (722)
|+.+++++|.+|++|+++++.+. ..++..++++|++++||++.++|++++.+++..... ...+++||.+++|||++
T Consensus 650 fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l 729 (1296)
T PRK10252 650 FDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEAL 729 (1296)
T ss_pred hhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCC
Confidence 99999999999999999999864 347788999999999999999999999988753222 23468999999999999
Q ss_pred CcchHHHHHhhccCCcccccccccccccccccCCcCC------cCccccccccCCCceEEEECCCCCcCCCCCCccceEE
Q 004952 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557 (722)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~ 557 (722)
++++.+.+.+.+ +++++|.||+||++++++...... .....++|+|++|++++|+|++++++|.|+. |||+
T Consensus 730 ~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~--Gel~ 806 (1296)
T PRK10252 730 PADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVA--GDLY 806 (1296)
T ss_pred CHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCc--eEEE
Confidence 999988887654 678999999999987554433221 2334689999999999999999999999996 9999
Q ss_pred E-----ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 558 L-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 558 v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
| +.||++ +++.|+++|..+|+.+|.+||+|||+|++++||+++|+||+|+|||++|+||+|+|||++|.
T Consensus 807 i~g~~~~~GY~~------~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~ 880 (1296)
T PRK10252 807 LTGIQLAQGYLG------RPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQ 880 (1296)
T ss_pred ecccccchhhCC------CcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHH
Confidence 8 356665 66789999999998889999999999999999999999999999999999999999999995
Q ss_pred ccCCCcceeEEEeec----CCCCC-ceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHH
Q 004952 633 QADESILETAAISVS----PAGGG-PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRR 706 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~----~~~~g-~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~ 706 (722)
.||+|.+|+|+... +...| ...+++||++..+...+.++|+++++++||.||+| .++.+++||+|+||||||+
T Consensus 881 -~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~ 959 (1296)
T PRK10252 881 -ALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRK 959 (1296)
T ss_pred -hCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHH
Confidence 99999999887652 11122 24799999988766667789999999999999999 4668999999999999999
Q ss_pred HHHHH
Q 004952 707 VLRDQ 711 (722)
Q Consensus 707 ~L~~~ 711 (722)
+|++.
T Consensus 960 ~L~~~ 964 (1296)
T PRK10252 960 ALPLP 964 (1296)
T ss_pred hcCCC
Confidence 99764
No 13
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-78 Score=701.70 Aligned_cols=602 Identities=27% Similarity=0.413 Sum_probs=475.5
Q ss_pred CccCCCccccccccHHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCC
Q 004952 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH 163 (722)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 163 (722)
+.|.|.+.....+++.-+....+.. ++..+.+|+.+++++++++..||..+++...+.|..++..+++.. ..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~ 76 (655)
T PRK03584 4 PLWTPSAERIAASRMTAFIRWLAAR-----RGLSFDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTVVLAGR--RMP 76 (655)
T ss_pred CCCCCChhhcccchHHHHHHHHHHH-----hCCChHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcEeecCC--CCC
Confidence 3676666555667777665443321 333345778999999999999999999887778999999887642 234
Q ss_pred CCCcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 004952 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (722)
Q Consensus 164 ~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~ 242 (722)
..+||.++.+|++++++++ .+|+++|+++.++. +..+++||+||.++++++|+.|++. +++||+|+++++|
T Consensus 77 ~~~wf~~~~~n~~~~~~~~-----~~~~~~Al~~~~~~---~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n 148 (655)
T PRK03584 77 GARWFPGARLNYAENLLRH-----RRDDRPAIIFRGED---GPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPN 148 (655)
T ss_pred CCeeCCCCEeeHHHHhhcc-----CCCCCeEEEEECCC---CceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 5799999999999999863 46999999987642 3346899999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHh---hcCCC--cEEEEcCC
Q 004952 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL---GAAPL--KAIVLPAI 317 (722)
Q Consensus 243 s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~ 317 (722)
++++++++|||+++|++++|++|.++.+++.+++++++++++|+++...++++.++....+. ...+. .++++...
T Consensus 149 ~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 228 (655)
T PRK03584 149 IPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYL 228 (655)
T ss_pred CHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecC
Confidence 99999999999999999999999999999999999999999999987766666555444432 22222 33444322
Q ss_pred CCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHH-HHHHHhhhhcCCCC
Q 004952 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKV 396 (722)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~-~~~~~~~~~~~~~~ 396 (722)
..............|++++..... .........+++++||+|||||||.||||+++|++++ +.+......+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 304 (655)
T PRK03584 229 GPAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGP 304 (655)
T ss_pred CCcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCC
Confidence 111111112234567777652211 1122334567999999999999999999999999875 44555566788999
Q ss_pred CCEEEEecCccccchhHHHHHHhhcCCEEEEecCC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCcc
Q 004952 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWT 471 (722)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~ 471 (722)
+|+++++++++|+++.+ ++++|+.|++++++++. .++..++++|+++++|++.++|++++.|.+... ....+++
T Consensus 305 ~d~~~~~~~~~~~~~~~-~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~ 383 (655)
T PRK03584 305 GDRFFWYTTCGWMMWNW-LVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLS 383 (655)
T ss_pred CCEEEEcCCchHHhHHH-HHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChh
Confidence 99999999999986543 67899999999998753 367899999999999999999999999987532 2346789
Q ss_pred ceeEEEeecCCCCcchHHHHHhhcc-CCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCC
Q 004952 472 KIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQ 550 (722)
Q Consensus 472 ~Lr~i~~~Ge~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~ 550 (722)
+||.+++|||++++++.+++.+.++ +.++++.||+||++..+.......+...+++|.|++|++++|+|++|+++ .|+
T Consensus 384 sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~ 462 (655)
T PRK03584 384 ALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGE 462 (655)
T ss_pred heEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCC-CCC
Confidence 9999999999999999999988763 57899999999987654443333445668899999999999999999999 677
Q ss_pred CccceEEEecccCCCcccccc-cccc---ccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHH
Q 004952 551 PCVGEVGLFPLYLGASDRLLN-ADHE---EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 626 (722)
Q Consensus 551 ~giGel~v~~~y~~~~~~~~~-~~~t---~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~e 626 (722)
. |||+|...+.+...+|++ ++.+ ..+|... +| ||+|||+|++|+||+++|+||+||+||++|+||+|.|
T Consensus 463 ~--GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~---~g--~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~E 535 (655)
T PRK03584 463 V--GELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTF---PG--VWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAE 535 (655)
T ss_pred c--eEEEEccCCCCCcceeeCCCccchHHHhhhccC---CC--EeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHH
Confidence 4 999995422222222333 2222 1233322 23 8999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCH---HHHHHHHHHHHHhhcCCC-eeecCCCCCCCCch
Q 004952 627 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNK 702 (722)
Q Consensus 627 IE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GK 702 (722)
||++|. +||+|.+|+|++++++..+ +.+++||+++++...+. ++|+++++++|+.+++|. ++++++||+|+|||
T Consensus 536 IE~~l~-~~p~V~ea~vvg~~~~~~g-~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK 613 (655)
T PRK03584 536 IYRQVE-ALPEVLDSLVIGQEWPDGD-VRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGK 613 (655)
T ss_pred HHHHHH-hCCCcceEEEEeeEcCCCC-EEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCcc
Confidence 999995 9999999999999998777 99999999988655443 578999999999999995 55999999999999
Q ss_pred hhHHHHHHHHhhh
Q 004952 703 LLRRVLRDQIKHE 715 (722)
Q Consensus 703 vdR~~L~~~~~~~ 715 (722)
|+|+.|++++.+.
T Consensus 614 i~r~~lr~~~~~~ 626 (655)
T PRK03584 614 KVELPVKKLLHGR 626 (655)
T ss_pred chHHHHHHHHcCC
Confidence 9999999987654
No 14
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.4e-78 Score=699.71 Aligned_cols=576 Identities=26% Similarity=0.419 Sum_probs=464.9
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEe
Q 004952 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (722)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (722)
.+|+.++++++++++.||..+.+. ...|.+++.++++.. ..+..+||.++.+|++++++++++ +.+||++|+++.
T Consensus 5 ~~y~~~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 79 (625)
T TIGR02188 5 EQYKELYEESIEDPDKFWAKLARE-LLDWFKPFTKVLDWS--FPPFYKWFVGGELNVSYNCVDRHL--EARPDKVAIIWE 79 (625)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh-cCceecCCceeecCC--CCCCCeeCCCCEEEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 467889999999999999999987 457999999987643 234689999999999999998765 679999999986
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHH
Q 004952 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (722)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~ 277 (722)
++ +.+..+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 80 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~ 157 (625)
T TIGR02188 80 GD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRIN 157 (625)
T ss_pred cC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHH
Confidence 54 123456899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeccchhcCCccccchHHHhh---cCC---CcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCc
Q 004952 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP---LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (722)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (722)
+++++++|+++...++++.++....+.+ ..+ ..++++......... .......|+++...... ...+.
T Consensus 158 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~ 231 (625)
T TIGR02188 158 DAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPW-VEGRDVWWHDLMAKASA-----YCEPE 231 (625)
T ss_pred hcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCc-cccccccHHHHHhhcCC-----CCCce
Confidence 9999999999887766665554443332 222 123333222111000 11123456666544221 12233
Q ss_pred cCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH-HhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEec
Q 004952 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (722)
Q Consensus 352 ~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~ 429 (722)
...+++++||+|||||||.||||+++|++++.... .....++++++|++++.++++|..+. +.++.+|++|+++++++
T Consensus 232 ~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~ 311 (625)
T TIGR02188 232 PMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFE 311 (625)
T ss_pred ecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEEC
Confidence 45779999999999999999999999999765433 34445788999999999999999886 56889999999999987
Q ss_pred CC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhcc--CCcccc
Q 004952 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIE 502 (722)
Q Consensus 430 ~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~--~~~l~n 502 (722)
+. .++..++++|+++++|++.++|++++.|.+.... ...++++||.+++|||++++++.+++.+.++ +++++|
T Consensus 312 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~ 391 (625)
T TIGR02188 312 GTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVD 391 (625)
T ss_pred CCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEe
Confidence 53 3678999999999999999999999999876432 3456899999999999999999999988765 378999
Q ss_pred cccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCC-CCCCccceEEEecccCCCcccccc-ccccccce
Q 004952 503 SCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGLFPLYLGASDRLLN-ADHEEVYF 579 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p-~G~~giGel~v~~~y~~~~~~~~~-~~~t~~~f 579 (722)
.||+||+++.++..... .+...+++|+|++|++++|+|++|++++ .|+. |||++...+.+....|++ ++.+...|
T Consensus 392 ~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~--GeL~v~~p~p~~~~gy~~~~~~~~~~~ 469 (625)
T TIGR02188 392 TWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEG--GYLVIKQPWPGMLRTIYGDHERFVDTY 469 (625)
T ss_pred cccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCe--EEEEEccCCCcccccccCChHHHHHHH
Confidence 99999998765443222 2345678999999999999999999999 8885 999995433222223333 33333322
Q ss_pred eccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEE
Q 004952 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (722)
Q Consensus 580 ~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~ 659 (722)
.. ..+| ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.+++|
T Consensus 470 ~~--~~~g--~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~~~~~g-~~~~a~ 543 (625)
T TIGR02188 470 FS--PFPG--YYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALV-SHPAVAEAAVVGIPDDIKG-QAIYAF 543 (625)
T ss_pred hc--cCCC--EEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEE
Confidence 11 1123 9999999999999999999999999999999999999999995 9999999999999998888 999999
Q ss_pred EEecCCCCCC---HHHHHHHHHHHHHhhcCCCe-eecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 660 VVLKKGFTSQ---PDKLKMIFSKAIQSKLNPLF-KVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 660 vv~~~~~~~~---~~~l~~~l~~~l~~~~~p~~-~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
|+++++...+ .++|+++++++|+.+++|.. +++++||+|+|||++|+.|++++.++
T Consensus 544 vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 544 VTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 9998875544 26799999999999999954 58999999999999999999998765
No 15
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=3.7e-78 Score=696.18 Aligned_cols=603 Identities=26% Similarity=0.379 Sum_probs=474.0
Q ss_pred CCCccCCCccccccccHHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCC
Q 004952 82 PPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKS 161 (722)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 161 (722)
++..|.|........++..+.+..+.. |...+.+|+.+++++++++..||..+++...+.|..++.++++...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~-- 75 (652)
T TIGR01217 3 PQPLWQPDAQRIAQARMTRFQAWAGEH-----HGAAEGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCARVVDDRT-- 75 (652)
T ss_pred CCCCCCCChhhcccchHHHHHHHHHHh-----hCCChhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCceeeeCCC--
Confidence 345787776666667776665444322 3334467899999999999999999999877899999999986522
Q ss_pred CCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEc
Q 004952 162 KHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDM 240 (722)
Q Consensus 162 ~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~ 240 (722)
.+..+||.++.+|+++++++. +++++|+++.++. +..+++||+||.++++++|+.|++. +++||+|++++
T Consensus 76 ~~~~~wf~~~~~n~~~~~~~~------~~~~~a~~~~~~~---~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~ 146 (652)
T TIGR01217 76 MPGAQWFPGARLNYAENLLRA------AGTEPALLYVDET---HEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYL 146 (652)
T ss_pred CCCCEECCCCeeeHHHHHhcc------CCCCeEEEEECCC---CCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Confidence 345789999999999999873 3689999987652 3456899999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhh---cCC--CcEEEEc
Q 004952 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP--LKAIVLP 315 (722)
Q Consensus 241 ~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~ 315 (722)
+|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++...++++.++....+.+ ..+ ..++++.
T Consensus 147 ~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~ 226 (652)
T TIGR01217 147 PNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIP 226 (652)
T ss_pred CCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEe
Confidence 99999999999999999999999999999999999999999999999887777666655444432 233 2234443
Q ss_pred CCCCCC-CCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHH-HHHHHhhhhcC
Q 004952 316 AIGNDV-GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHID 393 (722)
Q Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~-~~~~~~~~~~~ 393 (722)
...... ......+...|+++...... .........+++++||+|||||||.||||+++|++++ +........++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~ 302 (652)
T TIGR01217 227 YLGPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCD 302 (652)
T ss_pred CCCCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccC
Confidence 211100 00001234567777654211 1112234567999999999999999999999999964 44445555688
Q ss_pred CCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCC
Q 004952 394 LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGL 468 (722)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~ 468 (722)
++++|+++++++++|+++.+ ++.+|+.|++++++++. +++..+++++++++||++.++|++++.+..... ....
T Consensus 303 ~~~~d~~~~~~~~~~~~~~~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~ 381 (652)
T TIGR01217 303 LGPGDRLFYYTTTGWMMWNW-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTH 381 (652)
T ss_pred CCCCcEEEEeCCcchhhhHH-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccC
Confidence 99999999999999986544 56899999999999753 356789999999999999999998888866421 2346
Q ss_pred CccceeEEEeecCCCCcchHHHHHhhcc-CCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCC
Q 004952 469 DWTKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP 547 (722)
Q Consensus 469 ~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p 547 (722)
++++||.+++|||+++++..+++.+.++ +..+.+.||+||+++++.......+...+++|.|.+|++++|+|++|++++
T Consensus 382 ~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~~ 461 (652)
T TIGR01217 382 DLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPVT 461 (652)
T ss_pred ChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCCC
Confidence 7899999999999999999999887664 356789999999865444333334445678999999999999999999995
Q ss_pred CCCCccceEEEecccCCCcccccc-ccccc---cceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeec
Q 004952 548 DDQPCVGEVGLFPLYLGASDRLLN-ADHEE---VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS 623 (722)
Q Consensus 548 ~G~~giGel~v~~~y~~~~~~~~~-~~~t~---~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~ 623 (722)
|+. |||++...+.+.+..|++ ++.+. .+|... ..||+|||+|++|+||+|+|+||+||+||++|+||+
T Consensus 462 -g~~--GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~-----~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~ 533 (652)
T TIGR01217 462 -GEV--GELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTY-----PGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMG 533 (652)
T ss_pred -CCc--cEEEEecCCCccccceeCCCccchhHHhhhcCC-----CCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcC
Confidence 774 999995432222223333 33222 333321 228999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCH---HHHHHHHHHHHHhhcCCC-eeecCCCCCCC
Q 004952 624 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPL-FKVVPEFPRTA 699 (722)
Q Consensus 624 ~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~ 699 (722)
|.|||++|. +||+|.+|+|++++++..| +.++|||+++++...+. ++|+++++++|+.+++|. ++++++||+|+
T Consensus 534 p~EIE~~l~-~~p~V~eaavvg~~~~~~g-e~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~ 611 (652)
T TIGR01217 534 SAEIYNAVE-RLDEVRESLCIGQEQPDGG-YRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTL 611 (652)
T ss_pred HHHHHHHHH-hCCCcceEEEEeeecCCCC-EEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCC
Confidence 999999995 9999999999999998888 99999999988765543 578999999999999995 55899999999
Q ss_pred CchhhHHHHHHHHhhh
Q 004952 700 SNKLLRRVLRDQIKHE 715 (722)
Q Consensus 700 ~GKvdR~~L~~~~~~~ 715 (722)
||||+|+.|++++.+.
T Consensus 612 sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 612 TGKRVEVAVKRVLQGT 627 (652)
T ss_pred CccChHHHHHHHHcCC
Confidence 9999999999987544
No 16
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-77 Score=690.62 Aligned_cols=574 Identities=27% Similarity=0.397 Sum_probs=457.9
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEe
Q 004952 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (722)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (722)
.+|..+.+++++++..||..+.+. ..|.+++.++++. ..+..+||.++..|.++++++++. +++||++|+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~---~~~~~~w~~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 89 (637)
T PRK00174 17 EQYKALYQESVEDPEGFWAEQAKR--LDWFKPFDTVLDW---NAPFIKWFEDGELNVSYNCLDRHL--KTRGDKVAIIWE 89 (637)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh--cCeecCCcccccC---CCCCCccCCCCEeEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 456888899999999999999877 4688888888764 345789999999999999998765 678999999986
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHH
Q 004952 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (722)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~ 277 (722)
++. ++..+++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 90 ~~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~ 167 (637)
T PRK00174 90 GDD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRII 167 (637)
T ss_pred CCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHH
Confidence 541 12345899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeccchhcCCccccchHHHhh---cCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCcc
Q 004952 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (722)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (722)
+++++++|+++...+.++.++....+.. ..+. .++++......... .......|+++...... ..+...
T Consensus 168 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~ 241 (637)
T PRK00174 168 DAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDW-VEGRDLWWHELVAGASD-----ECEPEP 241 (637)
T ss_pred hcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCc-CCCCcccHHHHHhhcCC-----CCCccc
Confidence 9999999998876555554444433322 2221 23333221111100 01123456666543221 122334
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH-HhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEecC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~ 430 (722)
..+++++||+|||||||.||||+++|++++.... .....++++++|++++.++++|..+. +.++.+|++|++++++++
T Consensus 242 ~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 321 (637)
T PRK00174 242 MDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEG 321 (637)
T ss_pred cCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECC
Confidence 5678999999999999999999999999865443 34445788999999999999999887 578899999999999875
Q ss_pred C---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhcc--CCccccc
Q 004952 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIES 503 (722)
Q Consensus 431 ~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~--~~~l~n~ 503 (722)
. .++..+++.|++++||++.++|++++.|++.... ...++++||.+++|||++++++.+++.+.++ .++++|.
T Consensus 322 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~ 401 (637)
T PRK00174 322 VPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDT 401 (637)
T ss_pred CCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEec
Confidence 3 3678899999999999999999999999876432 3456889999999999999999998887764 3789999
Q ss_pred ccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccc-cccccccceec
Q 004952 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLL-NADHEEVYFRG 581 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~-~~~~t~~~f~~ 581 (722)
||+||++..++..... .....+++|+|++|++++|+|++|+++|.|+. |||++...+.+....|+ +++.+.+.|-
T Consensus 402 YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~--Gel~v~g~~p~~~~gy~~~~~~~~~~~~- 478 (637)
T PRK00174 402 WWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEG--GNLVIKDPWPGMMRTIYGDHERFVKTYF- 478 (637)
T ss_pred ccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCc--EEEEEcCCCCcccccccCCHHHHHHhhh-
Confidence 9999998755433221 23345789999999999999999999999985 99999532111112222 3333332221
Q ss_pred cccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEE
Q 004952 582 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVV 661 (722)
Q Consensus 582 ~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv 661 (722)
....+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++.+++..| +.+++||+
T Consensus 479 ---~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~-~~~~V~~~~Vvg~~~~~~g-~~~~a~vv 553 (637)
T PRK00174 479 ---STFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKVAEAAVVGRPDDIKG-QGIYAFVT 553 (637)
T ss_pred ---cCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEE
Confidence 112239999999999999999999999999999999999999999995 9999999999999998888 89999999
Q ss_pred ecCCCCCC---HHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 662 LKKGFTSQ---PDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 662 ~~~~~~~~---~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+.++...+ .++|+++++++|+.+++|. ++++++||+|+|||++|++|++++.+.
T Consensus 554 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 554 LKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred ECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 98865544 4689999999999999995 558999999999999999999987655
No 17
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.9e-80 Score=829.66 Aligned_cols=639 Identities=15% Similarity=0.161 Sum_probs=506.5
Q ss_pred CChhHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCC-----CCCc--cCCC
Q 004952 18 LKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKG-----PPLY--WFPS 89 (722)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~ 89 (722)
+..++..+|.++++++++. ..+++||++||++ |++.|++++....+|+ ||+++++++.... .... ....
T Consensus 2025 v~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2101 (4334)
T PRK05691 2025 CQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVEALQPPRSAAYNPL--FQVMCNVQRWEFQQSRQLAGMTVEYLVN 2101 (4334)
T ss_pred eecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccccCCCCc--eEEEEEeeccccccccCCCCceeEeecc
Confidence 3445667788888888877 6666999999999 9999999988888888 8898888753211 1111 1122
Q ss_pred ccccccccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCCCC
Q 004952 90 LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHGGT 166 (722)
Q Consensus 90 ~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~ 166 (722)
....++|||.+.+.+.++.+...+ |+. ++|++++++++.++|.++|+++...++.+...+ +...+.......
T Consensus 2102 ~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 2176 (4334)
T PRK05691 2102 DARATKFDLNLEVTDLDGRLGCCLTYSR-----DLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQQQLLDS 2176 (4334)
T ss_pred cCCccccceEEEEEecCCcEEEEEEECc-----ccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHHHHHHHHH
Confidence 234578898888777777777777 988 999999999999999999999987777766553 333222222223
Q ss_pred cCCCCccchhhhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC
Q 004952 167 WLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243 (722)
Q Consensus 167 w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s 243 (722)
|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|++|++. +++|++|+++++||
T Consensus 2177 ~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~l~~~~s 2248 (4334)
T PRK05691 2177 LAGEAGEARLDQTLHGLFAAQAARTPQAPALTFAGQ--------TLSYAELDARANRLARALRERGVGPQVRVGLALERS 2248 (4334)
T ss_pred hCCCCcCCCcccchHHHHHHHHHHCCCCeEEEeCCe--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC
Confidence 3333222222233433 245689999999999877 999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCC
Q 004952 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (722)
Q Consensus 244 ~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (722)
+++++++|||+|+|++|||+||.+|.+++.+++++++++++|++.........++ . ....+.+...
T Consensus 2249 ~~~vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~------~--~~~~~~~~~~------ 2314 (4334)
T PRK05691 2249 LEMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEALGELP------A--GVARWCLEDD------ 2314 (4334)
T ss_pred HHHHHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhhcccc------c--cceeEEeccc------
Confidence 9999999999999999999999999999999999999999999875321110000 0 0001111000
Q ss_pred CCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEe
Q 004952 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWP 403 (722)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~ 403 (722)
... ..... .........++++|||+|||||||+||||+++|+++++.+.+....++++++|+++++
T Consensus 2315 --------~~~-~~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~ 2380 (4334)
T PRK05691 2315 --------AAA-LAAYS-----DAPLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRADDCELHF 2380 (4334)
T ss_pred --------hhh-hhcCC-----CCCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcccEEEEe
Confidence 000 00000 0111122357899999999999999999999999999999988889999999999999
Q ss_pred cCccccchhHHHHHHhhcCCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCC
Q 004952 404 TNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGET 482 (722)
Q Consensus 404 ~~~~~~~~~~~~~~~L~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~ 482 (722)
++++|+.+++++|.+|++|+++++.+. ..++..+.++|++++||++.++|++++.|.+.... .....+||.+++|||+
T Consensus 2381 ~~~~fd~~~~~i~~~L~~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~-~~~~~~lr~i~~gGe~ 2459 (4334)
T PRK05691 2381 YSINFDAASERLLVPLLCGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAG-QGEQLPVRMCITGGEA 2459 (4334)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhc-cccCCCceEEEEcccc
Confidence 999999999999999999999999764 34778999999999999999999999999875422 2345689999999999
Q ss_pred CCcchHHHHHhhccCCcccccccccccccccccCCcC----CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE
Q 004952 483 SNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (722)
Q Consensus 483 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (722)
+++++.+++...++...++|.||+||++++.+..... ......++|+|++++.++|+|++++++|.|++ |||+|
T Consensus 2460 l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~~vp~G~~--GEL~i 2537 (4334)
T PRK05691 2460 LTGEHLQRIRQAFAPQLFFNAYGPTETVVMPLACLAPEQLEEGAASVPIGRVVGARVAYILDADLALVPQGAT--GELYV 2537 (4334)
T ss_pred CCHHHHHHHHHhCCCceEEeCcCCCcceEEEEEeecccccccCCCCCccccccCCCEEEEECCCCCCCCCCCc--eEEEe
Confidence 9999999998887777899999999998654332211 11233579999999999999999999999996 99998
Q ss_pred -----ecccCCCccccccccccccceeccccC-CCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 559 -----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 559 -----~~~y~~~~~~~~~~~~t~~~f~~~p~~-~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
+.||++ +++.|+++|..+|+. .|.|||+|||+|++++||+++|+||+|+|||++|+||+|+|||++|.
T Consensus 2538 ~G~~v~~GY~~------~~~~t~~~F~~~p~~~~~~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~EIE~~l~ 2611 (4334)
T PRK05691 2538 GGAGLAQGYHD------RPGLTAERFVADPFAADGGRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGEIESRLL 2611 (4334)
T ss_pred cccccCccccC------ChhhhhhhccCCCCCCCCCceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHHHHHHHH
Confidence 456665 667899999999875 47789999999999999999999999999999999999999999995
Q ss_pred ccCCCcceeEEEeecCCCCCceEEEEEEEecCCC------CCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhH
Q 004952 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGF------TSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLR 705 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~------~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR 705 (722)
+||+|.+|+|++..++ .+ +.+++|++..... ....++++++|+++||.||+| .++.+++||+|+|||+||
T Consensus 2612 -~~p~V~~a~V~~~~~~-~~-~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~v~~lP~t~~GKidr 2688 (4334)
T PRK05691 2612 -EHPAVREAVVLALDTP-SG-KQLAGYLVSAVAGQDDEAQAALREALKAHLKQQLPDYMVPAHLILLDSLPLTANGKLDR 2688 (4334)
T ss_pred -hCCCcceEEEEEeeCC-CC-cEEEEEEEecccccccccccccHHHHHHHHHhhCccccCChhheeecccCCCCCCcccH
Confidence 9999999999988543 44 7899999875321 223478999999999999999 566999999999999999
Q ss_pred HHHHHHH
Q 004952 706 RVLRDQI 712 (722)
Q Consensus 706 ~~L~~~~ 712 (722)
++|++..
T Consensus 2689 ~~L~~~~ 2695 (4334)
T PRK05691 2689 RALPAPD 2695 (4334)
T ss_pred HhhcCcc
Confidence 9998653
No 18
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=5e-77 Score=687.40 Aligned_cols=573 Identities=21% Similarity=0.319 Sum_probs=456.9
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCCCCCcCCCCccchhhhcccCcccCCCCCCceEEEEe
Q 004952 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (722)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (722)
.+|+.+++++++++..||..+++. ..|.+++.++++.. ..+..+||.++.+|.++++++++. +.+|+++|+++.
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~A~~~~ 75 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARR--IDWQTPFTQVLDYS--NPPFARWFVGGRTNLCHNAVDRHL--AKRPEQLALIAV 75 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHh--CCcccCchhhccCC--CCCcCccCCCcEeeHHHHHHHHhh--ccCCCCeEEEEE
Confidence 467889999999999999999996 47999999987642 235578999999999999998765 678999999985
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHH
Q 004952 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (722)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~ 277 (722)
+. +.+..+.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 76 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~ 153 (629)
T PRK10524 76 ST--ETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARID 153 (629)
T ss_pred cC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 42 112345899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeccchhcCCccccchHHHhh---cC---CCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCc
Q 004952 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (722)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (722)
+++++++|+++...++++.++....+.+ .. ...++++....... .........+.++...... ...+..
T Consensus 154 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~ 228 (629)
T PRK10524 154 DAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-ARVAGRDVDYATLRAQHLG----ARVPVE 228 (629)
T ss_pred hcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCCcccHHHHHhcCCC----CCCCce
Confidence 9999999998876666666554443322 11 22344443211100 0111223456665443221 111222
Q ss_pred cCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHH-HHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEec
Q 004952 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (722)
Q Consensus 352 ~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~ 429 (722)
...+++++|++|||||||.||||+++|++++... ......+++.++|++++.++++|..+. +.++.+|+.|+++++++
T Consensus 229 ~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 308 (629)
T PRK10524 229 WLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYE 308 (629)
T ss_pred eeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEEC
Confidence 3467899999999999999999999999975433 334456788999999999999999886 67889999999999987
Q ss_pred CC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 430 ~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
+. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+|+.+.+ +++++|.|
T Consensus 309 g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 387 (629)
T PRK10524 309 GLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNY 387 (629)
T ss_pred CCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEecc
Confidence 53 357789999999999999999999999987543 2345689999999999999999999888765 57899999
Q ss_pred cccccccccccCCc---CCcCccccccccCCCceEEEECC-CCCcCCCCCCccceEEEec----ccCCCccccccccccc
Q 004952 505 GGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLFP----LYLGASDRLLNADHEE 576 (722)
Q Consensus 505 G~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v~~----~y~~~~~~~~~~~~t~ 576 (722)
|+||++..++.... ..+...+++|+|++|++++|+|+ +|+++|.|+. |||++.. +++.+ ++.+++.+.
T Consensus 388 G~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~--Gel~i~gp~~~~~~~~--~~~~~~~~~ 463 (629)
T PRK10524 388 WQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK--GVLVIEGPLPPGCMQT--VWGDDDRFV 463 (629)
T ss_pred ccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc--EEEEEcCCCChhhcCC--ccCChHHHH
Confidence 99999843332221 12344578999999999999998 9999999985 9999943 34331 222333222
Q ss_pred -cceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceE
Q 004952 577 -VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (722)
Q Consensus 577 -~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~ 655 (722)
.+|... +.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.
T Consensus 464 ~~~~~~~----~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~d~~~g-~~ 537 (629)
T PRK10524 464 KTYWSLF----GRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESIS-SHPAVAEVAVVGVKDALKG-QV 537 (629)
T ss_pred HhhhccC----CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHH-hCCCcceEEEEccccCCCC-eE
Confidence 233211 3359999999999999999999999999999999999999999995 9999999999999998887 89
Q ss_pred EEEEEEecCCCCCC--------HHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 656 LVIFVVLKKGFTSQ--------PDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 656 l~a~vv~~~~~~~~--------~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+++||+++++...+ .++|+++++++|+.++.|. ++++++||+|+|||++|+.|++++.++
T Consensus 538 ~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 606 (629)
T PRK10524 538 AVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR 606 (629)
T ss_pred EEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 99999998754322 3678999999999999995 558999999999999999999987654
No 19
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.5e-77 Score=640.22 Aligned_cols=583 Identities=32% Similarity=0.459 Sum_probs=483.6
Q ss_pred cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeeeccCCCCCCCCCCcCCCCccchhhhcccCcccCCCCCCce
Q 004952 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (722)
Q Consensus 114 y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~ 193 (722)
|.....+|..|++.++++++.||...++.+....... .............+|+.+...|.+++|++++.... .++.+
T Consensus 6 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~-~~~~~ 82 (626)
T KOG1175|consen 6 YKNSLSSYREFYRFSVEDPERFWGEVAKELHWKFPWP--RCNKDENKGNPFTKWFPGAFLNACYNCLDRHIKEK-GGDKV 82 (626)
T ss_pred cCCCHHHHHHHHhhcccCHHHHHHHhhhhhhcccCcc--ccccccccCCCCccccccchhhhhHhhhhhhhhhc-CCCCc
Confidence 5556678899999999999999999999864333332 22222234456789999999999999999976445 79999
Q ss_pred EEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHH
Q 004952 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (722)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l 272 (722)
|+++.+..+ +....+||.||.+++.++|..|... +++||+|++++|+.+++++++|||.++|++.+++...+++..+
T Consensus 83 a~~~~~~~~--~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l 160 (626)
T KOG1175|consen 83 AIIFEGNEG--GDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKEL 160 (626)
T ss_pred EEEEEecCC--CceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHH
Confidence 999986643 3334499999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCcc
Q 004952 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (722)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (722)
..+++++++++|+|.+...++++.++......+................-......+..|.+.+..... ..++..
T Consensus 161 ~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~ 235 (626)
T KOG1175|consen 161 LDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVP 235 (626)
T ss_pred HHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC-----CCCcee
Confidence 999999999999999999999999888777766543322111110000001111235667777665543 334778
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChH-HHHHHHHhhhhcCCCCCCEEEEecCccccchhHH-HHHHhhcCCEEEEecC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG 430 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~-~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lv~~~~ 430 (722)
.+.+|+.+|+|||||||.|||+.+++.+ ++..+......++++++|++.+++.++|+.+.+. .+++|++|+|++++++
T Consensus 236 ~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g 315 (626)
T KOG1175|consen 236 VKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEG 315 (626)
T ss_pred cCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcC
Confidence 8899999999999999999999999987 4666666777899999999999999999999955 6789999999999987
Q ss_pred CC-ChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhccCCccccccccc
Q 004952 431 SP-LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (722)
Q Consensus 431 ~~-~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (722)
.+ ++..+++.+.+++||++++.|++++.|...... ..+++++||++.++||++.++..+|+.+.+...+|++.||+|
T Consensus 316 ~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qt 395 (626)
T KOG1175|consen 316 PPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQT 395 (626)
T ss_pred CCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeee
Confidence 76 888999999999999999999999988776443 344457899999999999999999999887655799999999
Q ss_pred ccccccccCCcCC-cCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccC-CCccccccc-c-ccccceeccc
Q 004952 508 ELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYL-GASDRLLNA-D-HEEVYFRGMP 583 (722)
Q Consensus 508 E~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~-~~~~~~~~~-~-~t~~~f~~~p 583 (722)
|+|..++...... +..++++|.|.+++.+.|+|++|++++.+. |.|+|++.+..+ +.+..++++ + ....||.++|
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~p 474 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFP 474 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCC
Confidence 9998887777766 889999999999999999999999999875 569999977666 555555544 3 3455666555
Q ss_pred cCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEec
Q 004952 584 MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLK 663 (722)
Q Consensus 584 ~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~ 663 (722)
. +|.|||.+++|+||+++++||.||+||++|+|+++.|||++|. +||.|.|++||+.+++..| +.++|||+++
T Consensus 475 g-----~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~-~hp~VaEsAvVg~p~~~~g-e~v~aFvvl~ 547 (626)
T KOG1175|consen 475 G-----YYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALV-EHPAVAESAVVGSPDPIKG-EVVLAFVVLK 547 (626)
T ss_pred c-----eEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHh-hCcchhheeeecCCCCCCC-eEEEEEEEEc
Confidence 2 8999999999999999999999999999999999999999995 9999999999999999988 9999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCC----ee-ecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 664 KGFTSQPDKLKMIFSKAIQSKLNPL----FK-VVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 664 ~~~~~~~~~l~~~l~~~l~~~~~p~----~~-~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
++. .+.++|++.|+++++..+.|. .+ +++.||+|.|||+.||+|++.+.++
T Consensus 548 ~g~-~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 548 SGS-HDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred CCC-CChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 984 445777777777766655553 33 8999999999999999999998876
No 20
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-75 Score=635.22 Aligned_cols=496 Identities=27% Similarity=0.298 Sum_probs=419.8
Q ss_pred CCCCc-eEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh---cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 188 KEDNT-VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM---FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 188 ~~pd~-~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~---v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
..+++ +++++.... .+.+||+|+..++.++|.+|.++ +++||+|++++||+++++.++|||+.+|+++.|+
T Consensus 28 ~~~~~~~~~i~~~~~-----g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 28 VYLDRNTSLVYQDSD-----GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred ccccCcceEEEecCC-----CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 34444 777776620 13999999999999999999975 7889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCC-HHHHhcccCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLS-WKDFLSSVDYH 342 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 342 (722)
+|.+.+.++.+.+++++++++|++.... +...........+++++................. +.++......
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~------~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFY------DKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP- 175 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchH------HHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC-
Confidence 9999999999999999999999998543 3343444444455555544311111111111111 3332222211
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcC
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (722)
.. ......+|++.++|||||||.||||++||++++...........+...++.++..|+.|..|++.++.++++|
T Consensus 176 ----~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~ 250 (537)
T KOG1176|consen 176 ----DG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAG 250 (537)
T ss_pred ----cc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhC
Confidence 11 3455679999999999999999999999999988877666667777899999999999999998888877777
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
++.++....++++.+++.|++|+||+++++|.++..|++.+.....+++++|.+.+||.+++++..+.+.++++...+.+
T Consensus 251 ~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q 330 (537)
T KOG1176|consen 251 GTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQ 330 (537)
T ss_pred CceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEE
Confidence 77777776779999999999999999999999999999987677789999999999999999999999999998789999
Q ss_pred cccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCcccccccccccc
Q 004952 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~ 577 (722)
.||+||+++..+.+.......++++|+++++.+..|.++.|+.+|+++. ||||+ ..||++ |++.|++
T Consensus 331 ~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~--GEI~vrg~~imkGY~~------NpeaT~~ 402 (537)
T KOG1176|consen 331 GYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQT--GEICVRGPQVMKGYLK------NPEATKE 402 (537)
T ss_pred eeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCc--eEEEEECcccchhhcC------ChHHHHh
Confidence 9999999976555544333578999999999999999999999999996 99999 356655 7788988
Q ss_pred ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 578 ~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
.|..+ .||+|||+|++|+||+|++.+|++|+||.+|+.|+|.|||++|+ .||.|.||+|++++|+..| +.++
T Consensus 403 ~~~~~------GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~-~hP~V~eaaVvgipDe~~G-e~p~ 474 (537)
T KOG1176|consen 403 AFDDD------GWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLL-THPDVLEAAVVGIPDEVWG-ETPA 474 (537)
T ss_pred hcccC------CccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHH-hCCCccEEEEEcccccccC-Ccce
Confidence 88854 29999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
||||.++|...++++++++++++|+.|+.| ..+++++||+|+||||.|+.|++.+.+..
T Consensus 475 A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 475 AFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLG 534 (537)
T ss_pred EEEEecCCCcCCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence 999999988999999999999999999999 56699999999999999999999987753
No 21
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-73 Score=571.44 Aligned_cols=503 Identities=20% Similarity=0.239 Sum_probs=424.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
+++.||+.|+++..++ .++||+|+.+.+.++|+.|.+. +++||||++..||+.+|+.++|||.++|.+.++++
T Consensus 60 t~~v~dkea~Vf~~eg------~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~N 133 (596)
T KOG1177|consen 60 TERVPDKEAAVFDHEG------IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLN 133 (596)
T ss_pred hhccCcceEEEEeecc------chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccC
Confidence 4688999999987764 2799999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc----------------CCCcEEEEcCCCCCCCCCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----------------APLKAIVLPAIGNDVGIPLREQ 328 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 328 (722)
|+|+.+++++.|+..+++++|+...+. .-...+.+.+. ++....++-..+.. .-.+
T Consensus 134 P~Yq~~elr~~L~k~~~k~l~~p~~~k----~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~----~~~G 205 (596)
T KOG1177|consen 134 PAYQSEELRYVLKKVGCKALFAPPQFK----TQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH----PLPG 205 (596)
T ss_pred cccccHHHHHHHhhcCeEEEEccchhh----hchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC----cCCC
Confidence 999999999999999999999986431 11122222221 12222222222111 1246
Q ss_pred CCCHHHHhcccCCCCC-CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCcc
Q 004952 329 DLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407 (722)
Q Consensus 329 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (722)
...++|++...+.... ....-.....|||++.|.|||||||.|||+.+||-|++|+......++++...+|++...|+.
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~ 285 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLY 285 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchH
Confidence 6778888776654111 111122345689999999999999999999999999999999999999999999999999999
Q ss_pred ccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcc
Q 004952 408 WVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (722)
Q Consensus 408 ~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~ 486 (722)
|.++. ..++.+|+.|+|+|++...+++...++.|.++++|+++.+|+|+..|++.......+++++|.++.||+++|++
T Consensus 286 H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~e 365 (596)
T KOG1177|consen 286 HCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPE 365 (596)
T ss_pred HHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHH
Confidence 99995 77889999999999999899999999999999999999999999999999888899999999999999999999
Q ss_pred hHHHHHhhccCCcccccccccccccccccCCcCC--cCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----e
Q 004952 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----F 559 (722)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~ 559 (722)
+.+.+.....-..+...||.||++...+.....+ .....++|..+++.+..|+|.+|.++|.|++ |||++ .
T Consensus 366 Llk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~--Gel~iRGY~tM 443 (596)
T KOG1177|consen 366 LLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTK--GELLIRGYSTM 443 (596)
T ss_pred HHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCC--ceEEEEechhh
Confidence 9988877543234788999999996544443322 2344689999999999999999999999997 99998 3
Q ss_pred cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcc
Q 004952 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (722)
Q Consensus 560 ~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (722)
.+||+ +++.|.+... .+|||+|||+|++|++|+++++||.+|+|+.+|.+|+|.|||+.|. +||.|.
T Consensus 444 l~Ywg------~~~kT~eti~------~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~-~hp~V~ 510 (596)
T KOG1177|consen 444 LGYWG------EEEKTKETIG------NDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLN-KHPLVK 510 (596)
T ss_pred eeecC------Ccccchhhcc------cccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHh-hCCCee
Confidence 45665 3344443332 4679999999999999999999999999999999999999999996 999999
Q ss_pred eeEEEeecCCCCCceEEEEEEEecCCCC--CCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 640 ETAAISVSPAGGGPEVLVIFVVLKKGFT--SQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 640 ~~~vv~~~~~~~g~~~l~a~vv~~~~~~--~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
++.||+++|+..| +.+||+|-++.+.. .+.++|+++++.+|..+.+|+ ++++++||+|.+|||.|-.++++++.++
T Consensus 511 ~a~VVGV~D~R~G-E~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~~l 589 (596)
T KOG1177|consen 511 EAHVVGVPDERLG-EEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKGHL 589 (596)
T ss_pred eEEEEccCCCccc-ceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHHhhc
Confidence 9999999999999 99999999998754 578999999999999999995 5599999999999999999999999876
Q ss_pred hh
Q 004952 717 SV 718 (722)
Q Consensus 717 ~~ 718 (722)
.-
T Consensus 590 ~l 591 (596)
T KOG1177|consen 590 GL 591 (596)
T ss_pred ce
Confidence 54
No 22
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.9e-71 Score=625.55 Aligned_cols=482 Identities=21% Similarity=0.226 Sum_probs=398.7
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++++||++|+++.+. ++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 58 ~a~~~pd~~Al~~~~~--------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 58 AARRAPDRAALIDERG--------TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred HHHHCCCceEEEECCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 3478999999998766 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
++.++.+++.+++++++++++|+++.... ....+.........++...... .....+...++++......
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 199 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTD------LLSALPPDLGRLRAWGGNPDDD--EPSGSTDETLDDLIAGSST-- 199 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHH------HHHhhccccccceEEEEecCcc--ccCCcCcccHHHHhcCCCC--
Confidence 99999999999999999999999875421 1111111111111111111000 0111244567777654322
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (722)
...+..++++++++|||||||.||||+++|+++.+.+......+++.++++++...|++|..++..++.++..|+
T Consensus 200 -----~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~ 274 (549)
T PRK07788 200 -----APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGS 274 (549)
T ss_pred -----CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCC
Confidence 111234578899999999999999999999999988887777888999999999999999999887888999999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
++++.. ..++..+++.+++++||++.++|++++.|++.... ...++++||.+++|||++++++.+++.+.+ +++++
T Consensus 275 ~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~ 352 (549)
T PRK07788 275 TVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLY 352 (549)
T ss_pred EEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-Cccce
Confidence 999874 56888999999999999999999999999887543 455688999999999999999999988776 46899
Q ss_pred ccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEec-----ccCCCccccccccccc
Q 004952 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFP-----LYLGASDRLLNADHEE 576 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~-----~y~~~~~~~~~~~~t~ 576 (722)
|.||+||++.++...........+++|+|+++++++|+|++++++|.|+. |||++.. ||++. +. .
T Consensus 353 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~------~~-~- 422 (549)
T PRK07788 353 NLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVV--GRIFVGNGFPFEGYTDG------RD-K- 422 (549)
T ss_pred eccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCe--EEEEEeCCCccccccCC------Cc-c-
Confidence 99999999865443332223345789999999999999999999999985 9999943 44432 11 1
Q ss_pred cceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEE
Q 004952 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (722)
Q Consensus 577 ~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l 656 (722)
..+ ..||+|||+|++++||+++|+||+||+||++|++|+|.|||++|. +||+|.+|+|++.+++..| +.+
T Consensus 423 ~~~--------~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~ 492 (549)
T PRK07788 423 QII--------DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLA-GHPDVVEAAVIGVDDEEFG-QRL 492 (549)
T ss_pred ccc--------CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHH-hCCCeeEEEEECCcCcccc-cEE
Confidence 111 239999999999999999999999999999999999999999995 9999999999999998877 899
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHH
Q 004952 657 VIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQ 711 (722)
Q Consensus 657 ~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~ 711 (722)
++||+++++...+.++++++++++|+.|++|. ++++++||+|+|||++|++|+++
T Consensus 493 ~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 493 RAFVVKAPGAALDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999988777788999999999999999995 55899999999999999999863
No 23
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-70 Score=615.86 Aligned_cols=490 Identities=26% Similarity=0.291 Sum_probs=406.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|+++.+..+ ++||+||+++++++|++|++. |++||+|+|+++|++++++++|||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~~~------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 21 ARRNPDRPALIFLGRGG------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred HHhCCCceEEEEcCCCc------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecC
Confidence 36899999999988721 399999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCC-CCHHHHhcccCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD-LSWKDFLSSVDYHP 343 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (722)
|.+...++.+++++++++++++++... +....+....+....+....... ... ..+.+.......
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 160 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPVVLVVLLVGDAD------DRLPITLEALAAEGPG-- 160 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCcceEEEeccccc------ccccccHHHHhhccCC--
Confidence 999999999999999999999997421 22222222222211222111100 000 245555332221
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC--CCCCCEEEEecCccccchhHH-HHHHhh
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPVI-LFSSFL 420 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~-~~~~L~ 420 (722)
.........++|+|+++|||||||.||||++||+|++.+.......++ +++.|+++...|++|++|+.. ++.+++
T Consensus 161 --~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~ 238 (534)
T COG0318 161 --PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLL 238 (534)
T ss_pred --cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHH
Confidence 111111267899999999999999999999999999988888878888 899999999999999999965 455599
Q ss_pred cCCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccc-eeEEEeecCCCCcchHHHHHhhccCC
Q 004952 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK-IRSFASTGETSNVDDDLWLSSKAWYN 498 (722)
Q Consensus 421 ~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~-Lr~i~~~Ge~l~~~~~~~~~~~~~~~ 498 (722)
.|+++++.++ .+++..++..+.++++|++.++|+++..|+........++++ ||.+++||+++++++.+.+.++++..
T Consensus 239 ~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 318 (534)
T COG0318 239 GGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPI 318 (534)
T ss_pred cCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCC
Confidence 9999999875 578889999999999999999999999999987766666665 99999999999999999999888766
Q ss_pred cccccccccccccccccCCcCC-cCccccccccCCCceEEEECCCCC-cCCCCCCccceEEE-----ecccCCCcccccc
Q 004952 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV-PYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (722)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~-~~p~G~~giGel~v-----~~~y~~~~~~~~~ 571 (722)
++++.||+||++..++...... ....+.+|+|+|+++++|+|+++. ++| |+ +|||++ ..||++ +
T Consensus 319 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~--vGei~irgp~v~~GY~~------~ 389 (534)
T COG0318 319 AILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GE--VGEIWVRGPNVMKGYWN------R 389 (534)
T ss_pred ceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CC--ceEEEEECchhhhhhcC------C
Confidence 8999999999997665555444 235567799999999999997664 666 77 599999 345555 4
Q ss_pred ccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCC
Q 004952 572 ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGG 651 (722)
Q Consensus 572 ~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~ 651 (722)
++.|++.|.. .+||+|||+|++|+||+++|+||.+|+||++|++|+|.|||+++. +||.|.+|+|++++|+..
T Consensus 390 pe~t~~~f~~------~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~-~~~~V~~aavvgvpd~~~ 462 (534)
T COG0318 390 PEATAEAFDE------DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLA-EHPAVAEAAVVGVPDERW 462 (534)
T ss_pred hHHHHHhhcc------CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHH-hCCCcceEEEEeCCCCcc
Confidence 5677766653 239999999999999999999999999999999999999999995 999999999999999999
Q ss_pred CceEEEEEEEecCC--CCCCHHHHHHHHHHHHHhhcCCCee-ecCCCCCCCCchhhHHHHHHHHhh
Q 004952 652 GPEVLVIFVVLKKG--FTSQPDKLKMIFSKAIQSKLNPLFK-VVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 652 g~~~l~a~vv~~~~--~~~~~~~l~~~l~~~l~~~~~p~~~-~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
| ++++|+|+++++ ...+.++|+++|+++++.|.+|+.+ ++++||+|++||++|+.|++.+..
T Consensus 463 G-e~~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 463 G-ERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred C-ceEEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 8 999999999986 3447899999999999999999655 889999999999999999998877
No 24
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=7.4e-70 Score=609.90 Aligned_cols=483 Identities=70% Similarity=1.147 Sum_probs=369.7
Q ss_pred cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCC
Q 004952 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (722)
Q Consensus 240 ~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (722)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++......+..+....+........+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 68999999999999999999999999999999999999999999999864322222223333332222223333321111
Q ss_pred CCCCCCCCCCCCHHHHhcccCCC--CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCC
Q 004952 320 DVGIPLREQDLSWKDFLSSVDYH--PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (722)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~ 397 (722)
...........+|.+++...... .......+....++++++|+|||||||.||||++||++++.........++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 00000011234566665321110 0000111122356899999999999999999999999987766555566788999
Q ss_pred CEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeE
Q 004952 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 475 (722)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~ 475 (722)
|++++.+|++|+.+.+.++.+|+.|+++++.+...++..+++.|+++++|++.++|++++.|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999988888999999999998765677889999999999999999999999987542 33457899999
Q ss_pred EEeecCCCCcchHHHHHhhcc-CCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccc
Q 004952 476 FASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (722)
Q Consensus 476 i~~~Ge~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giG 554 (722)
+++|||+++++..+++.+..+ +++++|.||+||++..++......+...+++|+|.++++++|+|++|+++|.|+..+|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 999999999998887766322 3689999999998754333222223445789999999999999999999999852259
Q ss_pred eEEEecccCCCccccccccccccceeccccC--CCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 555 EVGLFPLYLGASDRLLNADHEEVYFRGMPMY--KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 555 el~v~~~y~~~~~~~~~~~~t~~~f~~~p~~--~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
||++..++++.+.+|++++.++.+|.++|+. ++.+||+|||+|++|+||+|+|+||.||+||++|+||+|.|||++|.
T Consensus 321 el~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~ 400 (499)
T PLN03051 321 EVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACD 400 (499)
T ss_pred EEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHH
Confidence 9999766554444555655555555555543 56779999999999999999999999999999999999999999995
Q ss_pred ccCCCcceeEEEeecCCCCCceEEEEEE---EecCCC-CCCHHHHHHHHHHH----HHhhcCC-CeeecCCCCCCCCchh
Q 004952 633 QADESILETAAISVSPAGGGPEVLVIFV---VLKKGF-TSQPDKLKMIFSKA----IQSKLNP-LFKVVPEFPRTASNKL 703 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~~~~~g~~~l~a~v---v~~~~~-~~~~~~l~~~l~~~----l~~~~~p-~~~~v~~lP~t~~GKv 703 (722)
+.||+|.+|+|++++++..|.+.++||| +++++. ..+.++|+++|+++ |+.++.| .+.++++||+|+||||
T Consensus 401 ~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi 480 (499)
T PLN03051 401 RAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNKL 480 (499)
T ss_pred hcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCccH
Confidence 2399999999999999887756799999 777664 35667888777665 4444444 5668999999999999
Q ss_pred hHHHHHHHHhhhhhhcccC
Q 004952 704 LRRVLRDQIKHELSVRSRI 722 (722)
Q Consensus 704 dR~~L~~~~~~~~~~~~~~ 722 (722)
+|++|++.+.+.+..++||
T Consensus 481 ~r~~L~~~~~~~~~~~~~~ 499 (499)
T PLN03051 481 LRRVLRDQLKKELSGRSKL 499 (499)
T ss_pred HHHHHHHHHHHhhccccCC
Confidence 9999999999999888875
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-69 Score=616.11 Aligned_cols=508 Identities=23% Similarity=0.327 Sum_probs=419.9
Q ss_pred CcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004952 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (722)
Q Consensus 166 ~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~ 244 (722)
.|+.+...|.+++++++++ +..+|+++|+++.+.. ..+++||+||.++++++|++|.+. +++||+|+++++|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~----~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHA-DGGRKDKVALRYLDAS----RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIP 109 (570)
T ss_pred ccCCCCceeHHHHHHHHhh-ccCCCCceEEEEECCC----CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 6888889999998888754 1357999999986531 234899999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCC
Q 004952 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG 322 (722)
Q Consensus 245 ~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 322 (722)
++++++|||+++|++++|+++.++.+++.+++++++++++++++........ ...+. ..+++....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--------~~~~~~~~~~~~~~~~---- 177 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--------DDLPSLKHVLLVGEDV---- 177 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--------hcCCCceEEEEECCCc----
Confidence 9999999999999999999999999999999999999999998754321110 01111 222222111
Q ss_pred CCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEE
Q 004952 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402 (722)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~ 402 (722)
....+..++.+++..... ........+++++|++|||||||.||||+++|+++++.+......+++.++|++++
T Consensus 178 -~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~ 251 (570)
T PRK04319 178 -EEGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWC 251 (570)
T ss_pred -CCCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEe
Confidence 011234566666544322 12223446789999999999999999999999999888877777788999999999
Q ss_pred ecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEee
Q 004952 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFAST 479 (722)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~ 479 (722)
..+++|.++. +.++.++..|+++++.+...++..+++.|+++++|++.++|++++.|.+... ....++++||.+++|
T Consensus 252 ~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 252 TADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSV 331 (570)
T ss_pred cCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEc
Confidence 9999999886 6789999999999998777788999999999999999999999999987542 234568899999999
Q ss_pred cCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe
Q 004952 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (722)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~ 559 (722)
|+++++++.+++.+.+ +.++++.||+||++..+...........+++|+|+++++++|+|++++++|.|+. |||++.
T Consensus 332 G~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~--Gel~i~ 408 (570)
T PRK04319 332 GEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRM--GNLAIK 408 (570)
T ss_pred ccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCc--eEEEEc
Confidence 9999999999888765 5789999999999865443333333456789999999999999999999999985 999995
Q ss_pred c-------ccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 560 P-------LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 560 ~-------~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
. ||++ +++.++++|.+ | ||+|||+|++++||+++++||+||+||++|++|+|.|||++|.
T Consensus 409 ~~~~~~~~GY~~------~~~~~~~~~~~-----g--w~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~ 475 (570)
T PRK04319 409 KGWPSMMRGIWN------NPEKYESYFAG-----D--WYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLM 475 (570)
T ss_pred CCCChHHhHhcC------CHHHhhhhhcC-----C--ceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHh
Confidence 3 4554 45566666651 2 9999999999999999999999999999999999999999995
Q ss_pred ccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCH---HHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHH
Q 004952 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVL 708 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L 708 (722)
+||+|.+++|++.+++..| +.+++|+++.++...+. ++|+++++++|+.|+.|. ++++++||+|++||++|++|
T Consensus 476 -~~~~V~~~~v~g~~~~~~g-~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L 553 (570)
T PRK04319 476 -EHPAVAEAGVIGKPDPVRG-EIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVL 553 (570)
T ss_pred -hCCCeeecceecccCcCCc-eEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHH
Confidence 9999999999999998888 89999999887654332 588999999999999995 55899999999999999999
Q ss_pred HHHHhh
Q 004952 709 RDQIKH 714 (722)
Q Consensus 709 ~~~~~~ 714 (722)
+++..+
T Consensus 554 ~~~~~~ 559 (570)
T PRK04319 554 KAWELG 559 (570)
T ss_pred HHHHhC
Confidence 998654
No 26
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.7e-69 Score=612.17 Aligned_cols=486 Identities=18% Similarity=0.177 Sum_probs=384.0
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
.++++|+++|+.+.+.+ ++||+||.++++++|++|.+. +||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 ~~~~~p~~~a~~~~~~~-------~~Ty~el~~~~~~lA~~L~~~--~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 98 (539)
T PRK06334 28 LCSEMTTATVCWDEQLG-------KLSYNQVRKAVIALATKVSKY--PDQHIGIMMPASAGAYIAYFATLLSGKIPVMIN 98 (539)
T ss_pred HHHhCCCceEEEeCCCC-------cccHHHHHHHHHHHHHHHhhc--cCCeEEEEcCCchHHHHHHHHHHhcCCeeEecC
Confidence 34789999999876532 899999999999999999875 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc---CCCcEEEEcCCCCCCCCCCCCCCCCHHHHhccc--
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV-- 339 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 339 (722)
|.++.+++.+++++++++++|+++.... .+...... .+...+.+.... ....+.+.....
T Consensus 99 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~ 163 (539)
T PRK06334 99 WSQGLREVTACANLVGVTHVLTSKQLMQ------HLAQTHGEDAEYPFSLIYMEEVR---------KELSFWEKCRIGIY 163 (539)
T ss_pred cccchHHHHHHHHHcCCCEEEehHHHHH------HHhhhhhccccccccEEEEehhh---------hhccHHHhhhhhhh
Confidence 9999999999999999999999875421 11111110 112222221100 001111111000
Q ss_pred ---CCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHH
Q 004952 340 ---DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (722)
Q Consensus 340 ---~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (722)
...............++++++|+|||||||.||||+++|+++.....+....++++++|+++++.|+.|.+++ ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 243 (539)
T PRK06334 164 MSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCT 243 (539)
T ss_pred hcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHH
Confidence 0000000011123567999999999999999999999999998888777777889999999999999999887 457
Q ss_pred HHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhc
Q 004952 416 FSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (722)
Q Consensus 416 ~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~ 495 (722)
+.++..|+++++.....++..+++.|+++++|++.++|++++.|++.......++++||.+++||+++++++.+++.+.+
T Consensus 244 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 323 (539)
T PRK06334 244 LFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTF 323 (539)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHC
Confidence 88999999999876556888999999999999999999999999876554556789999999999999999999998888
Q ss_pred cCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECC-CCCcCCCCCCccceEEE-----ecccCCCcccc
Q 004952 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (722)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v-----~~~y~~~~~~~ 569 (722)
++++++|.||+||++.+++...........++|+|++|++++|+|+ .++++|.|+. |||+| ..||++.
T Consensus 324 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~~---- 397 (539)
T PRK06334 324 PHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGET--GLVLTRGTSLFSGYLGE---- 397 (539)
T ss_pred CCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCce--EEEEEecCcccccccCC----
Confidence 7889999999999986555443333334568999999999999995 5889999985 99998 3466653
Q ss_pred ccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcce------eEE
Q 004952 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE------TAA 643 (722)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~------~~v 643 (722)
++.+ .|.. .++.+||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|. +||+|.+ ++|
T Consensus 398 --~~~~--~~~~---~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~-~~~~v~~~~~~~~~~v 469 (539)
T PRK06334 398 --DFGQ--GFVE---LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILM-EGFGQNAADHAGPLVV 469 (539)
T ss_pred --cccc--ccee---eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHH-HccCCccccccCceEE
Confidence 3322 2221 124569999999999999999999999999999999999999999995 9999998 677
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHH-HHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 644 ISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~-l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
++.+++ . ..+++|++.. .+.++++++|+++ ++.||.|. +.++++||+|+||||||++|++++...
T Consensus 470 ~~~~~~--~-~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 536 (539)
T PRK06334 470 CGLPGE--K-VRLCLFTTFP----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSL 536 (539)
T ss_pred EcCCCC--c-eEEEEEEecc----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHHh
Confidence 777642 1 4566676642 3457899999986 78899995 558999999999999999999986654
No 27
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1e-68 Score=616.46 Aligned_cols=510 Identities=21% Similarity=0.214 Sum_probs=401.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++..........+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++| +++|++
T Consensus 35 a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~G-i~~pi~ 113 (632)
T PRK07529 35 AARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAAG-IANPIN 113 (632)
T ss_pred HHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC-EEEeCC
Confidence 37899999999753322222345999999999999999999999 9999999999999999999999999999 569999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc--EEEEcCCCCCCCC-C---------CCCCCCCH
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGI-P---------LREQDLSW 332 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~---------~~~~~~~~ 332 (722)
|.++++++.+++++++++++|+++.... ....+.........+.. ++.+......... . ...+...+
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTLGPFPG-TDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRKAHARILDF 192 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEeCCCCC-chHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccccccccCCH
Confidence 9999999999999999999999864310 00111111122222222 2222211100000 0 11234456
Q ss_pred HHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh
Q 004952 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (722)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (722)
.+.+..... ..........++++++++|||||||.||||+++|+++++........+++.+++++++..|++|..+.
T Consensus 193 ~~~~~~~~~---~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 269 (632)
T PRK07529 193 DAELARQPG---DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGLPLFHVNAL 269 (632)
T ss_pred HHHHhcCCC---ccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEecCchhhhHH
Confidence 665544322 11112223467999999999999999999999999998887777777888999999999999998887
Q ss_pred -HHHHHHhhcCCEEEEecCC-C-C---hhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcc
Q 004952 413 -VILFSSFLNGATLALYQGS-P-L---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (722)
Q Consensus 413 -~~~~~~L~~G~~lv~~~~~-~-~---~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~ 486 (722)
..++.+|..|+++++.+.. . + ...++++|+++++|++.++|+++..|++... ...++++||.+++||++++++
T Consensus 270 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~v~~gg~~l~~~ 348 (632)
T PRK07529 270 LVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRYALCGAAPLPVE 348 (632)
T ss_pred HHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEEEEEcCCCCCHH
Confidence 4688999999999997632 1 2 2478899999999999999999999987653 334689999999999999999
Q ss_pred hHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEE--ECCCC---CcCCCCCCccceEEEe-c
Q 004952 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVI--LDECG---VPYPDDQPCVGEVGLF-P 560 (722)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v--ld~~~---~~~p~G~~giGel~v~-~ 560 (722)
+.+++.+.+ +++++|.||+||+++++...........+++|+|++++.++| +|++| +++|.|+. |||+|. +
T Consensus 349 l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~--Gel~v~gp 425 (632)
T PRK07529 349 VFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEV--GVLCIAGP 425 (632)
T ss_pred HHHHHHHHh-CCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCc--eEEEEECC
Confidence 999888765 689999999999987655443333446689999999999888 47777 88999985 999993 3
Q ss_pred ccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcce
Q 004952 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE 640 (722)
Q Consensus 561 ~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~ 640 (722)
+.+.+ |++++.+...|. +.+||+|||+|++++||+++|+||+||+||++|++|+|.|||++|. +||+|.+
T Consensus 426 ~v~~G---Y~~~~~~~~~~~------~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~-~~p~V~~ 495 (632)
T PRK07529 426 NVFSG---YLEAAHNKGLWL------EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALL-RHPAVAL 495 (632)
T ss_pred Ccccc---ccCCcccccccc------CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCeeE
Confidence 32221 334444444443 2349999999999999999999999999999999999999999995 9999999
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHh-hcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 641 TAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS-KLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 641 ~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~-~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
|+|++.+++..| +.+++||++.++...+.+++++++++++++ +++|. ++++++||+|++|||+|++|++.+...
T Consensus 496 a~vvg~~d~~~g-e~~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 496 AAAVGRPDAHAG-ELPVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKIFKPALRRDAIRR 571 (632)
T ss_pred EEEEeccCCCCC-ceeEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcccHHHHHHHHHHH
Confidence 999999998887 899999999988777889999999999975 78995 558999999999999999999876543
No 28
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-69 Score=629.13 Aligned_cols=461 Identities=19% Similarity=0.216 Sum_probs=382.4
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 004952 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (722)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~ 266 (722)
.+||++|+++ +. .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|.
T Consensus 18 ~~pd~~a~~~-~~--------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~ 88 (705)
T PRK06060 18 GWYDRPAFYA-AD--------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPE 88 (705)
T ss_pred cCCCceEEEe-cC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCC
Confidence 4799999985 34 799999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCC
Q 004952 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (722)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (722)
++.+++.+++++++++++|+++........ .. .....++...... ..
T Consensus 89 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------------~~------------------~~~~~~~~~~~~~---~~ 135 (705)
T PRK06060 89 LHRDDHALAARNTEPALVVTSDALRDRFQP------------SR------------------VAEAAELMSEAAR---VA 135 (705)
T ss_pred CCHHHHHHHHhcCCCcEEEEchHHhhhhcc------------cc------------------cchhhhhhhhccc---cC
Confidence 999999999999999999998743211000 00 0001111111000 00
Q ss_pred CCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhh-hhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCE
Q 004952 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW-AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (722)
Q Consensus 347 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (722)
........+++++|++|||||||.||||+++|+++.+.+.+.. ..+++.+++++++..++.|+.++ ..++.+|+.|++
T Consensus 136 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 136 PGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 0011234568999999999999999999999999988776553 45788999999999999999887 568899999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
+++.+...++..+..+++++++|+++++|+++..|++... ..++++||.+++|||++++++.+++.+.+++++++|.|
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~Y 293 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGI 293 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeee
Confidence 9998766677788899999999999999999999987542 33578999999999999999999998888778999999
Q ss_pred cccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccccccccccce
Q 004952 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYF 579 (722)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f 579 (722)
|+||++.++.... ......+++|+|+++++++|+|++|+++|.|+. |||+|. .||++.++ .+ +
T Consensus 294 G~tE~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~--GEl~i~g~~v~~GY~~~~~------~~---~ 361 (705)
T PRK06060 294 GSTEVGQTFVSNR-VDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVE--GDLWVRGPAIAKGYWNRPD------SP---V 361 (705)
T ss_pred eccccCceEEecc-CCCCCcCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEccchhhhhhhCCCc------cc---c
Confidence 9999986543322 222345789999999999999999999999995 999993 46766432 21 1
Q ss_pred eccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEE
Q 004952 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (722)
Q Consensus 580 ~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~ 659 (722)
.+.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. .||+|.+++|++.++...+ +.+++|
T Consensus 362 ------~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~a~vv~~~~~~~~-~~~~a~ 433 (705)
T PRK06060 362 ------ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLII-EDEAVAEAAVVAVRESTGA-STLQAF 433 (705)
T ss_pred ------cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeecCccCC-eeEEEE
Confidence 13459999999999999999999999999999999999999999995 9999999999999988776 899999
Q ss_pred EEecCCCCCCH---HHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHH
Q 004952 660 VVLKKGFTSQP---DKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQI 712 (722)
Q Consensus 660 vv~~~~~~~~~---~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~ 712 (722)
|++.++...+. .+++++|+++||.||+| .++++++||+|+|||+||++|++.+
T Consensus 434 vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 434 LVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred EEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 99876544443 47889999999999999 5669999999999999999999865
No 29
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.6e-68 Score=606.81 Aligned_cols=495 Identities=18% Similarity=0.155 Sum_probs=390.6
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++++|+++|+++++. ++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 16 ~~~~~p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl 87 (563)
T PLN02860 16 LATLRGNAVVTISGNR--------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPL 87 (563)
T ss_pred HHHhcCCceEEecCCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeC
Confidence 3478999999998666 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHh-hcCCCcE-EEEcCCCCCCCCCCCCCCCCHHHHhcccCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPLKA-IVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (722)
+|.++.+++.+++++++++++++++... .....+. ...+... +++.................++++......
T Consensus 88 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 88 NYRWSFEEAKSAMLLVRPVMLVTDETCS------SWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecccc------hHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc
Confidence 9999999999999999999999987431 1111111 1112111 111111000000000011111111111000
Q ss_pred CCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhc
Q 004952 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (722)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (722)
.........++++++++|||||||.||||+++|++++.........+++.++|+++...|++|+.++..++.+|..
T Consensus 162 ----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~ 237 (563)
T PLN02860 162 ----TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMV 237 (563)
T ss_pred ----cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHHc
Confidence 0001122357899999999999999999999999998776666667889999999999999999999888999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhccCCc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~ 499 (722)
|+++++.+ ..++..+++.|+++++|++.++|+++..|++.... ....+++||.+++||+++++++.+++.+.+++.+
T Consensus 238 G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~ 316 (563)
T PLN02860 238 GACHVLLP-KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAK 316 (563)
T ss_pred CceEEecC-CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCc
Confidence 99999986 46788999999999999999999999999875422 2345789999999999999999999988887889
Q ss_pred ccccccccccccccccCCcCC----------------------cCccccccccCCCceEEEECCCCCcCCCCCCccceEE
Q 004952 500 IIESCGGTELSSAYIQGSLLQ----------------------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557 (722)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----------------------~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~ 557 (722)
++|.||+||+++.++...... .....++|+|+++++++|+|++ .|+ +|||+
T Consensus 317 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~--~Gel~ 389 (563)
T PLN02860 317 LFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSR--VGRIL 389 (563)
T ss_pred eecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC-----CCc--eeEEE
Confidence 999999999976443322111 0112378999999999999976 465 49999
Q ss_pred E-----ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 558 L-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 558 v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
+ ..||++ +++.|++.|.. .+||+|||+|++++||+++|+||+||+||++|++|+|.|||++|.
T Consensus 390 v~g~~~~~GY~~------~~~~t~~~~~~------~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 390 TRGPHVMLGYWG------QNSETASVLSN------DGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred EecCcccccccC------CccccchhccC------CCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 8 345555 45566665543 239999999999999999999999999999999999999999995
Q ss_pred ccCCCcceeEEEeecCCCCCceEEEEEEEecCCC--------------CCCHHHHHHHHHH-HHHhhcCCC-eee-cCCC
Q 004952 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------------TSQPDKLKMIFSK-AIQSKLNPL-FKV-VPEF 695 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~--------------~~~~~~l~~~l~~-~l~~~~~p~-~~~-v~~l 695 (722)
.||+|.+|+|++.+++..+ +.++|||+++++. ..+.+++++++++ .|+.|++|. ++. +++|
T Consensus 458 -~~p~V~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~l 535 (563)
T PLN02860 458 -QHPGVASVVVVGVPDSRLT-EMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPF 535 (563)
T ss_pred -hCCCcceeEEEEEecCcCC-ceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCC
Confidence 9999999999999998877 8999999988652 2456789999998 599999995 444 5789
Q ss_pred CCCCCchhhHHHHHHHHhhhhhhc
Q 004952 696 PRTASNKLLRRVLRDQIKHELSVR 719 (722)
Q Consensus 696 P~t~~GKvdR~~L~~~~~~~~~~~ 719 (722)
|+|++|||+|++|++++.+.+.+-
T Consensus 536 P~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 536 PLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred CCCcccchhHHHHHHHHHHHHhcc
Confidence 999999999999999998876553
No 30
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-67 Score=595.98 Aligned_cols=480 Identities=19% Similarity=0.187 Sum_probs=391.6
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++++||++|+++.+. ++||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 52 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 123 (537)
T PRK13382 52 AAQRCPDRPGLIDELG--------TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLL 123 (537)
T ss_pred HHHhCCCCeEEEeCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEec
Confidence 4478999999998665 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
+|.++.+++.+++++++++++|++.... +.........+....++..... .....++++......
T Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 188 (537)
T PRK13382 124 NTSFAGPALAEVVTREGVDTVIYDEEFS------ATVDRALADCPQATRIVAWTDE-------DHDLTVEVLIAAHAG-- 188 (537)
T ss_pred CcccCHHHHHHHHHhcCCCEEEEchhhH------HHHHHHHhhccccceEEEecCC-------cccccHHHHhhccCc--
Confidence 9999999999999999999999987432 1112211111111111111000 012344444432211
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (722)
. .....+++.++++|||||||.||||+++|+++..........+.+..+++++...|++|..++..++.++..|+
T Consensus 189 ---~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~ 263 (537)
T PRK13382 189 ---Q--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLAC 263 (537)
T ss_pred ---C--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCc
Confidence 0 11124688999999999999999999999998887777777788889999999999999999888899999999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
++++.+ ..++..+++.|+++++|++.++|++++.|++... ....++++||.+++|||++++++.+.+.+.++ .+++
T Consensus 264 ~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~ 341 (537)
T PRK13382 264 TIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIY 341 (537)
T ss_pred EEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEE
Confidence 998865 5678899999999999999999999999987542 12345678999999999999999988887764 6799
Q ss_pred ccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-cccCCCcccccccccccccee
Q 004952 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-PLYLGASDRLLNADHEEVYFR 580 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-~~y~~~~~~~~~~~~t~~~f~ 580 (722)
|.||+||++.+++..........+++|+|++++.++|+|++++++|.|+. |||++. ++.+.+ |. ++.+.. |.
T Consensus 342 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~g---Y~-~~~~~~-~~ 414 (537)
T PRK13382 342 NNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEV--GTIFVRNDTQFDG---YT-SGSTKD-FH 414 (537)
T ss_pred ecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCe--eEEEEEcCCcccC---cc-ccchhh-cc
Confidence 99999999865543332223456789999999999999999999999985 999993 333321 22 233332 21
Q ss_pred ccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEE
Q 004952 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (722)
Q Consensus 581 ~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~v 660 (722)
.| ||+|||++++++||+++|+||+||+||++|+||+|.|||+.|. .||+|.+++|++.+++..| +.+++||
T Consensus 415 -----~g--~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~v 485 (537)
T PRK13382 415 -----DG--FMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLA-THPDVAEAAVIGVDDEQYG-QRLAAFV 485 (537)
T ss_pred -----CC--CEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHH-hCCCEeeEEEEccCccccC-CEEEEEE
Confidence 12 9999999999999999999999999999999999999999995 9999999999999988777 8999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHH
Q 004952 661 VLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRD 710 (722)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~ 710 (722)
++.++...+.++++++++++|+.|++|. ++++++||+|++||++|++|++
T Consensus 486 v~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 486 VLKPGASATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EECCCCCCCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9987766777899999999999999995 5588999999999999999864
No 31
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.4e-67 Score=593.79 Aligned_cols=495 Identities=20% Similarity=0.235 Sum_probs=400.6
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+.+|+++|+++.+.+ .+..+.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 35 ~~~p~~~A~~~~~~~--~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 35 ASCPDKTAVTAVRLG--TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred HHCCCceEEEecCCC--ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEecccc
Confidence 578999999986521 12335999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC-
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH- 342 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (722)
.++.+++.+++++++++++++++.+.. .+..+....+....+. .++++... +..++.++.......
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 181 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKTFRG-FDHAAMARRLRPELPALRHVVVVGGD----------GADSFEALLITPAWEQ 181 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEeccccC-cchHHHHHHHhhhCCCcceEEEecCC----------CccCHHHHhhCCcccc
Confidence 999999999999999999999875310 0000111112122221 12222111 122344443322110
Q ss_pred --CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHh
Q 004952 343 --PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (722)
Q Consensus 343 --~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (722)
............++++++++|||||||.||||+++|++++..+......+++.+++++++..|++|..+. +.++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l 261 (547)
T PRK13295 182 EPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPV 261 (547)
T ss_pred ccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHH
Confidence 0001111223467899999999999999999999999999888877778899999999999999998876 6688999
Q ss_pred hcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCc
Q 004952 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (722)
Q Consensus 420 ~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~ 499 (722)
..|+++++.+ ..++..+++.++++++|++.++|+++..|.........++++||.+++||+++++++.+++.+.+ +++
T Consensus 262 ~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 339 (547)
T PRK13295 262 MLGATAVLQD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAK 339 (547)
T ss_pred HcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCC
Confidence 9999999876 46788999999999999999999999999887655566789999999999999999999888776 789
Q ss_pred ccccccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccc
Q 004952 500 IIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNAD 573 (722)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~ 573 (722)
++|.||+||++.+.+..... ......++|+|++++.++|+|++++++|.|+. |||+|. .||++ +++
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~------~~~ 411 (547)
T PRK13295 340 IVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI--GRLQVRGCSNFGGYLK------RPQ 411 (547)
T ss_pred eEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC--CeEEEEcCcccccccC------Ccc
Confidence 99999999998654333221 12234688999999999999999999999986 999993 34444 444
Q ss_pred ccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCc
Q 004952 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (722)
Q Consensus 574 ~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~ 653 (722)
.|+..+ +| ||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+++|++++++..|
T Consensus 412 ~t~~~~------~g--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~-~~~~v~~~~v~~~~~~~~g- 481 (547)
T PRK13295 412 LNGTDA------DG--WFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLY-RHPAIAQVAIVAYPDERLG- 481 (547)
T ss_pred ccccCC------CC--CeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCeeeEEEEeeecCCCC-
Confidence 454331 23 9999999999999999999999999999999999999999995 9999999999999988887
Q ss_pred eEEEEEEEecCCCCCCHHHHHHHHHH-HHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 654 EVLVIFVVLKKGFTSQPDKLKMIFSK-AIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~-~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
++++++|+++++...+.+++++++++ .++.||+| .++++++||+|++||++|++|++++.+
T Consensus 482 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 482 ERACAFVVPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred cEEEEEEEeCCCCCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhc
Confidence 89999999987766677899999997 79999999 455999999999999999999998865
No 32
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.7e-67 Score=596.91 Aligned_cols=490 Identities=19% Similarity=0.221 Sum_probs=395.7
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
+.+|+++|+++...+ .++||+||+++++++|++|++ . +++||+|+++++|++++++++|||+++|++++|++
T Consensus 50 ~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 50 HNHNGDTALIDSSTG------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cccCCCCEEEECCCC------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcC
Confidence 468999999975431 279999999999999999999 8 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
|.++.+++.++++++++++++++.+.. ..+. ......+.+..... .. ........+.++......
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--- 188 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENV---------EKLS-PLGVPVIGVPENYD-FD-SKRIEFPKFYELIKEDFD--- 188 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHH---------HHHH-hcCCcEEecCcccc-cc-cCccCcccHHHHhhcCCc---
Confidence 999999999999999999999987432 1111 11112222211000 00 000122345555443221
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh----hcCC-CCCCEEEEecCccccchh-HHHHHH
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDL-KVGDVYCWPTNLGWVMGP-VILFSS 418 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~----~~~~-~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (722)
..+.....++++++++|||||||.||||+++|+++.+.+..... .+.. ...++++...|+.|..++ ..++.+
T Consensus 189 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 266 (560)
T PLN02574 189 --FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGL 266 (560)
T ss_pred --ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHH
Confidence 11223345789999999999999999999999999877654432 2222 356788999999999887 446678
Q ss_pred hhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC-CCCCccceeEEEeecCCCCcchHHHHHhhccC
Q 004952 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (722)
Q Consensus 419 L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~-~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~ 497 (722)
+..|+++++.+ ..++..++++|+++++|++.++|++++.|.+.... ...++++||.+++||++++++..+++.+.+++
T Consensus 267 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~ 345 (560)
T PLN02574 267 LSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPH 345 (560)
T ss_pred HhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCC
Confidence 88999999886 46788999999999999999999999999886532 34568899999999999999999998888878
Q ss_pred CcccccccccccccccccCCc-CCcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEe-----cccCCCccccc
Q 004952 498 NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF-----PLYLGASDRLL 570 (722)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~ 570 (722)
+++++.||+||++.+.+.... ......+++|+|+++++++|+| ++|+++|.|+. |||+|. .||++
T Consensus 346 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~--Gei~v~g~~~~~GY~~------ 417 (560)
T PLN02574 346 VDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC--GELWIQGPGVMKGYLN------ 417 (560)
T ss_pred CcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC--eEEEEECcchhhhhcC------
Confidence 899999999999865433222 2223457899999999999999 78999999995 999993 45554
Q ss_pred cccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCC
Q 004952 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (722)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~ 650 (722)
+++.|++.|.. .+||+|||+|++++||+++++||+||+||++|++|++.|||++|. .||+|.+++|++++++.
T Consensus 418 ~~~~t~~~~~~------~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~V~~~~v~~~~~~~ 490 (560)
T PLN02574 418 NPKATQSTIDK------DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLI-SHPEIIDAAVTAVPDKE 490 (560)
T ss_pred ChhHhhhhccC------CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHH-hCCCcceEEEEccccCC
Confidence 55667666643 239999999999999999999999999999999999999999995 99999999999999887
Q ss_pred CCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
.| +.+++||+.+++...+.++++++++++|+.|+.|. +.++++||+|++||++|+.|++.+....
T Consensus 491 ~g-~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~ 556 (560)
T PLN02574 491 CG-EIPVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSV 556 (560)
T ss_pred CC-cceEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcc
Confidence 77 88999999887766777899999999999999995 5589999999999999999999986643
No 33
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-66 Score=592.69 Aligned_cols=495 Identities=21% Similarity=0.227 Sum_probs=396.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+++.++ .+||+||.++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 34 a~~~p~~~al~~~~~--------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 34 CQRFADKPAFSNLGK--------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeec
Confidence 367899999998766 89999999999999999997 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCC-CC------------------CCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN-DV------------------GIP 324 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------~~~ 324 (722)
+|.++.+++.+++++++++++|+++... +....+......+.+++..... .. ...
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 106 NPLYTAREMEHQFNDSGAKALVCLANMA------HLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred CCCCCHHHHHHHHhccCceEEEEecchh------hhHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 9999999999999999999999976432 1112221111112222211000 00 000
Q ss_pred CCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC--CCC-CCEEE
Q 004952 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKV-GDVYC 401 (722)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~--~~~-~d~~l 401 (722)
..++...+.+.+..... .........++++++++|||||||.||||+++|+++...+......+. +.. .++++
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 180 HLPQAVKFNDALAKGAG----QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred CCcccccHHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 00122334444433221 111223346799999999999999999999999999877655544433 343 36788
Q ss_pred EecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeec
Q 004952 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (722)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~G 480 (722)
+..|+.|..+. +.++.++..|++.++.+...++..+++.|+++++|++..+|+++..|.........++++||.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 89999998887 56778888999888877656788899999999999999999999999876544445678999999999
Q ss_pred CCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-
Q 004952 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF- 559 (722)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~- 559 (722)
+++++++.+++.+.+ ++++++.||+||++.++..... .....+++|+|++++.++|+|++++++|.|+. |||++.
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPS-QAIQVGTIGIPVPSTLCKVIDDDGNELPLGEV--GELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCc-cCCCCCccCccCCCCEEEEECCCCCCCCCCCC--eEEEEec
Confidence 999999988887764 6899999999998865443322 23345789999999999999999999999985 999993
Q ss_pred ----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccC
Q 004952 560 ----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (722)
Q Consensus 560 ----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~ 635 (722)
+||++ +++.|++.|..+ +||+|||+|++++||.+++.||+||+||++|++|+|.|||++|. .|
T Consensus 412 ~~~~~gY~~------~~~~t~~~~~~~------g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~-~~ 478 (562)
T PRK05677 412 PQVMKGYWQ------RPEATDEILDSD------GWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLA-AL 478 (562)
T ss_pred CccchhhcC------CchhhhhccCCC------CcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHH-hC
Confidence 45555 556777777532 39999999999999999999999999999999999999999995 99
Q ss_pred CCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 636 p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
|+|.+++|++++++..+ +.+++|++++++...+.++++++++++|+.|++|. ++++++||+|+|||++|++|++++..
T Consensus 479 ~~v~~~~v~g~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~ 557 (562)
T PRK05677 479 PGVLQCAAIGVPDEKSG-EAIKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELK 557 (562)
T ss_pred CCccEEEEEeccCccCC-ceEEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHH
Confidence 99999999999988877 88999999887666778899999999999999994 55899999999999999999987765
Q ss_pred hh
Q 004952 715 EL 716 (722)
Q Consensus 715 ~~ 716 (722)
+.
T Consensus 558 ~~ 559 (562)
T PRK05677 558 KA 559 (562)
T ss_pred hc
Confidence 53
No 34
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.5e-68 Score=522.83 Aligned_cols=496 Identities=20% Similarity=0.247 Sum_probs=418.6
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+|+++||++|++++++ .+||+||+++++++|..|++. +++||+|.+.+||..+++++++|.+|+|+++|.-
T Consensus 37 ~A~~~pdriAv~d~~~--------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlA 108 (542)
T COG1021 37 HAARYPDRIAVIDGER--------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLA 108 (542)
T ss_pred HHhhcCCceEEecCcc--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhc
Confidence 3479999999999888 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
-|++...+|.+..+.+.++.+|.+... .++..-+....+....+....++...... .....+..+....
T Consensus 109 LpsHr~~Ei~~f~~~~e~~~~i~~~~~-~gFd~~~~ar~~~a~~~tlr~v~v~ge~~-------~~~~~~~~~~~~a--- 177 (542)
T COG1021 109 LPSHRASELGAFASQIEAALLIVARQH-SGFDYRPFARELVAKHPTLRHVIVAGEAE-------HPSVLEAALCHPA--- 177 (542)
T ss_pred cchhhHHHHHHHHHhhcchheeechhh-cccCcHHHHHHHHhhCCcceEEEEccCCC-------CcchhhhhhhCcc---
Confidence 999999999999999999999998643 34444455555666666633333222211 0111222222221
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh--HHHHHHhhc
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP--VILFSSFLN 421 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~L~~ 421 (722)
....+..+.+++++||...+.||||.||-+..+|..+..++......++++..+++++..|..|.+.+ -.+++.+++
T Consensus 178 -~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 178 -GLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred -ccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeee
Confidence 12233456678899999999999999999999999999988888889999999999999998887766 458999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
|+++|+.+ ++++.....+|++++||+..++|.+...|++..+.+..+++|||.+-+||..+++++.+++...+ +|.+-
T Consensus 257 gG~VVla~-~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQ 334 (542)
T COG1021 257 GGTVVLAP-DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQ 334 (542)
T ss_pred ccEEEECC-CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHH
Confidence 99999976 67788889999999999999999999999999888999999999999999999999999887765 78999
Q ss_pred ccccccccccccccCCcCCcCccccccccC-CCceEEEECCCCCcCCCCCCccceEEEeccc-CCCccccccccccccce
Q 004952 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGLFPLY-LGASDRLLNADHEEVYF 579 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld~~~~~~p~G~~giGel~v~~~y-~~~~~~~~~~~~t~~~f 579 (722)
+.+|+.|.-++++-.......-..+-|+|+ |.-+++|+|++|++|++|++ |+|.....| +. .||..++.++..|
T Consensus 335 QVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~--G~LltRGPYTir--GYyrap~HNa~aF 410 (542)
T COG1021 335 QVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEV--GELLTRGPYTIR--GYYRAPEHNARAF 410 (542)
T ss_pred HHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCc--ceeeecCCeeee--eeccCchhhhhcc
Confidence 999999976655443332223335779998 57799999999999999996 999883333 22 1344666778888
Q ss_pred eccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEE
Q 004952 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (722)
Q Consensus 580 ~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~ 659 (722)
..+. +|+|||++++++||+|.+.||.+|||+.+|++|..+|||+.|+ .||.|.+|++|+++|+..| ++.|||
T Consensus 411 ~a~G------FYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL-~HP~V~~AAlVampDelLG-EksCAf 482 (542)
T COG1021 411 DADG------FYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLL-RHPAVHDAALVAMPDELLG-EKSCAF 482 (542)
T ss_pred CcCC------ceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHh-hCchhhhhhhhcCchhhcC-cceeEE
Confidence 8765 7999999999999999999999999999999999999999997 9999999999999999999 999999
Q ss_pred EEecCCCCCCHHHHHHHHHHH-HHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 660 VVLKKGFTSQPDKLKMIFSKA-IQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~-l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
|++++. ..+..+|+++|++. |.+|.+| +..++++||+|+-||||||+|++.+...
T Consensus 483 iv~~~~-~~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 483 IVVKEP-PLRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred EEecCC-CCCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 999874 47778999999986 7889999 7779999999999999999999987754
No 35
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.4e-66 Score=589.81 Aligned_cols=486 Identities=21% Similarity=0.248 Sum_probs=398.6
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++|+++|+++.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 34 ~~~~~~~a~~~~~~~------~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 34 SEFSDRPCLIDGATG------RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred HhCCCCeEEEecCCC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCC
Confidence 578999999875321 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
.++.+++..++++++++++|+++... +.+...........+.+.... .....+.++......
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~---- 169 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYV------DKLKGLAEDDGVTVVTIDDPP--------EGCLHFSELTQADEN---- 169 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchH------HHHHHHhhcCCceEEEeCCCC--------CCceeHHHHhcCCCC----
Confidence 99999999999999999999987432 111122111111222222110 122334444432211
Q ss_pred CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh----hcCCCCCCEEEEecCccccchh-HHHHHHhh
Q 004952 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (722)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (722)
..+.....+++++|++|||||||.||||+++|+++++.+.+... .+++.++|+++...|+.|.+++ ..++.++.
T Consensus 170 -~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 170 -ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred -CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 12233456799999999999999999999999999877654432 4678999999999999999987 44678899
Q ss_pred cCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcc
Q 004952 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (722)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l 500 (722)
.|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++++.+
T Consensus 249 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~ 327 (537)
T PLN02246 249 VGAAILIMP-KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVL 327 (537)
T ss_pred cCCEEEEeC-CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeE
Confidence 999999987 4577899999999999999999999999987665555668899999999999999999999998888889
Q ss_pred cccccccccccccccCCc----CCcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEe-----cccCCCccccc
Q 004952 501 IESCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF-----PLYLGASDRLL 570 (722)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~ 570 (722)
++.||+||++.+++.... ......+++|+|+++++++|+| +.++++|.|+. |||++. .||++
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~------ 399 (537)
T PLN02246 328 GQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQP--GEICIRGPQIMKGYLN------ 399 (537)
T ss_pred eccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCc--eEEEEECCchhccccC------
Confidence 999999999865433211 1123456899999999999999 57999999996 999993 45554
Q ss_pred cccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCC
Q 004952 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (722)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~ 650 (722)
+++.++.+|.. .+||+|||+|++++||+++++||+||+||++|+||+|.|||+.|. .||+|.+++|++.++..
T Consensus 400 ~~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~ 472 (537)
T PLN02246 400 DPEATANTIDK------DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLI-SHPSIADAAVVPMKDEV 472 (537)
T ss_pred CchhhhhcccC------CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHH-hCCCeeEEEEEcccCcc
Confidence 44556555532 249999999999999999999999999999999999999999995 99999999999998887
Q ss_pred CCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
.+ +.++++++..++...+.++|+++|+++|+.|+.| +++++++||+|+|||++|++|++++..
T Consensus 473 ~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 473 AG-EVPVAFVVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred CC-ceeEEEEEeCCCCCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 77 8899999988776667789999999999999999 566999999999999999999988653
No 36
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.2e-66 Score=586.36 Aligned_cols=494 Identities=20% Similarity=0.241 Sum_probs=402.8
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~--v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+++.+. ++||+||.++++++|..|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~--------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 91 (546)
T PRK08314 20 ARRYPDKTAIVFYGR--------AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPV 91 (546)
T ss_pred HHHcCCCcceeecCc--------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeec
Confidence 368899999999877 999999999999999999986 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCC----CC--------------CCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND----VG--------------IPL 325 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------------~~~ 325 (722)
+|.++.+++.+++++++++++++++.... .+...........+++...... .. ...
T Consensus 92 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 92 NPMNREEELAHYVTDSGARVAIVGSELAP------KVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred CcCcCHHHHHHHHHhCCCeEEEEccchhh------hHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 99999999999999999999999875421 1111111111111111100000 00 000
Q ss_pred CCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecC
Q 004952 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (722)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~ 405 (722)
..+...|++....... .......++++++++|||||||.||||+++|+++++.+......+++.++|++++..|
T Consensus 166 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 239 (546)
T PRK08314 166 PGGVVAWKEALAAGLA------PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLP 239 (546)
T ss_pred ccccccHHHHhcccCC------CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcC
Confidence 1123445555443211 1223456789999999999999999999999999998888777888999999999999
Q ss_pred ccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCC
Q 004952 406 LGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSN 484 (722)
Q Consensus 406 ~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~ 484 (722)
+.|..++ +.++.+|.+|+++++.+ ..++..++++++++++|++.++|++++.++........+++++|.+++||++++
T Consensus 240 ~~~~~g~~~~~~~~l~~G~~i~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 240 LFHVTGMVHSMNAPIYAGATVVLMP-RWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred chHHHHHHHHHHHHHHcCCeEEecC-CCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 9999987 56789999999999987 357788999999999999999999999998765555567889999999999999
Q ss_pred cchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEe----
Q 004952 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF---- 559 (722)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~---- 559 (722)
+++.+++.+.+ +.++++.||+||++......... .....++|+|+++++++|+| ++++++|.|.. |||++.
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~ 394 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSNPPD-RPKLQCLGIPTFGVDARVIDPETLEELPPGEV--GEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecCCCc-CCCCCccCcccCCeEEEEEeCCCCcCCCCCCc--eEEEEECCch
Confidence 99999988776 57899999999998654433222 23456899999999999999 46999999985 999993
Q ss_pred -cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCc
Q 004952 560 -PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (722)
Q Consensus 560 -~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V 638 (722)
.||++ +++.+++.|..+ +|.+||+|||+|+++++|.++++||+||+||++|+||+|.|||++|. +||+|
T Consensus 395 ~~gY~~------~~~~t~~~f~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~-~~~~v 464 (546)
T PRK08314 395 FKGYWN------RPEATAEAFIEI---DGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY-KHPAI 464 (546)
T ss_pred hccccC------ChhHhhhhhhhc---CCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH-hCcch
Confidence 34544 445666666543 35569999999999999999999999999999999999999999995 99999
Q ss_pred ceeEEEeecCCCCCceEEEEEEEecCCC--CCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 639 LETAAISVSPAGGGPEVLVIFVVLKKGF--TSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 639 ~~~~vv~~~~~~~g~~~l~a~vv~~~~~--~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
.+++|++.++...+ +.+++|++++++. ..+.++++++++++|+.|++| .++++++||+|+|||++|+.|++..+..
T Consensus 465 ~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~ 543 (546)
T PRK08314 465 QEACVIATPDPRRG-ETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKAR 543 (546)
T ss_pred heEEEEeCCCcccC-ceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhhh
Confidence 99999999988777 8999999988753 245589999999999999999 5669999999999999999998765543
No 37
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.5e-66 Score=601.16 Aligned_cols=506 Identities=17% Similarity=0.123 Sum_probs=380.1
Q ss_pred CCCCCCceEEEEec-CCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++||++|+.+.. ..+..+.++.+||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 54 a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 54 VETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPL 133 (651)
T ss_pred HHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 47899999996421 111123456799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCC----CCCCCCCCHHHHhcc
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGI----PLREQDLSWKDFLSS 338 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 338 (722)
++.++.+++.+++++++++++|++.... +.........+. +.+++......... ........|+++.+.
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTL------NTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQ 207 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHH------HHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHh
Confidence 9999999999999999999999987432 222222222322 22222111000000 001123457776654
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (722)
.... ..+.....++++++|+|||||||.||||++||++++..+.+....+++.++|++++++|++|+++.+.++.+
T Consensus 208 ~~~~----~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~ 283 (651)
T PLN02736 208 GRSS----PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVM 283 (651)
T ss_pred cccC----CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHH
Confidence 3220 111223467999999999999999999999999999988888778889999999999999999999888899
Q ss_pred hhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC-----------------------------CCCC-
Q 004952 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----------------------------LEGL- 468 (722)
Q Consensus 419 L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~-----------------------------~~~~- 468 (722)
|..|+++++.+. ++..+++.|+++++|+++++|++++.|.+... ....
T Consensus 284 l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (651)
T PLN02736 284 LHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPM 361 (651)
T ss_pred HHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCch
Confidence 999999998864 56789999999999999999999988754310 0000
Q ss_pred -----------Cc-cceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceE
Q 004952 469 -----------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGL 536 (722)
Q Consensus 469 -----------~l-~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 536 (722)
.+ ++||.+++||+++++++.+++...+ ++++++.||+||+++.++.... .....+++|+|+||+++
T Consensus 362 ~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~pg~~v 439 (651)
T PLN02736 362 WDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMDE-GDNLSGHVGSPNPACEV 439 (651)
T ss_pred HHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccCC-CCCCCCccCCccCceEE
Confidence 01 4899999999999999999887665 5789999999999865443332 23456789999999999
Q ss_pred EEECC-CCCcCCCCCCc-cceEEE-ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCC
Q 004952 537 VILDE-CGVPYPDDQPC-VGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADD 613 (722)
Q Consensus 537 ~vld~-~~~~~p~G~~g-iGel~v-~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd 613 (722)
+|+|. ++.....+.++ .|||++ +++.+. .|+.+++.|++.|..+ +||+|||+|++|+||+|+|+||.||
T Consensus 440 ~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~--GY~~~~~~t~~~~~~d------gw~~TGDlg~~d~dG~l~i~GR~kd 511 (651)
T PLN02736 440 KLVDVPEMNYTSEDQPYPRGEICVRGPIIFK--GYYKDEVQTREVIDED------GWLHTGDIGLWLPGGRLKIIDRKKN 511 (651)
T ss_pred EEEEccccCcccCCCCCCCceEEecCCcccc--ccccCHHHHHhhhccC------CCeeccceEEEcCCCcEEEEEechh
Confidence 99983 32221111111 489988 333222 1223666777777532 3999999999999999999999999
Q ss_pred eeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC--------CCCHHHHHHHHH------
Q 004952 614 TMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------TSQPDKLKMIFS------ 678 (722)
Q Consensus 614 ~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~--------~~~~~~l~~~l~------ 678 (722)
+||+ +|++|+|.|||++|. .||.|.+|+|++. . .+ +.++|+|+++++. ..+..++.++++
T Consensus 512 ~ik~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~--~-~~-~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (651)
T PLN02736 512 IFKLAQGEYIAPEKIENVYA-KCKFVAQCFVYGD--S-LN-SSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRA 586 (651)
T ss_pred heEcCCCcEechHHHHHHHh-cCCCeeEEEEEec--C-CC-ceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHH
Confidence 9997 699999999999995 9999999999983 2 34 7899999987521 122122322222
Q ss_pred ------------HHHHhhcCC-CeeecCCCC------CCCCchhhHHHHHHHHhhhhhh
Q 004952 679 ------------KAIQSKLNP-LFKVVPEFP------RTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 679 ------------~~l~~~~~p-~~~~v~~lP------~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
+.|+.|..| ++.++++.| +|++||++|++|++.+++++++
T Consensus 587 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~ 645 (651)
T PLN02736 587 AVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISD 645 (651)
T ss_pred HHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 147778888 555788776 7999999999999999888764
No 38
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=5.4e-66 Score=587.30 Aligned_cols=494 Identities=16% Similarity=0.158 Sum_probs=385.0
Q ss_pred CCCCCCceEEEEecCCCC--CCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 004952 186 RRKEDNTVAIVWREDRCD--ESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~--~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vp 262 (722)
++++||++|+++.+.+.. ....+++||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|
T Consensus 16 a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 16 AQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVL 95 (552)
T ss_pred HHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEE
Confidence 367899999998654210 11234799999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC-C--CcEEEEcCCCCCCCCCCCCCCCCHHHHhccc
Q 004952 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (722)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (722)
++|.++.+++.+++++++++++|+++... ....+.... . ...+.+... .......+.++....
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIPKAH-------LARRLFGWGKPSVRRLVTVGGR-------LLWGGTTLATLLRDG 161 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEeccHHH-------HHHHHhccCccchhheeccccc-------cccCCccHHHhcccC
Confidence 99999999999999999999999865210 000110000 0 011111100 011122455543221
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHh
Q 004952 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (722)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L 419 (722)
.. .........+++++|++|||||||.||||+++|+++.+.+.+....+++.+++++++..|+.+. ..+
T Consensus 162 ~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~-------~~~ 230 (552)
T PRK09274 162 AA----APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFAL-------FGP 230 (552)
T ss_pred cc----ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHh-------hhh
Confidence 11 1122234467899999999999999999999999999988888788899999999888776543 234
Q ss_pred hcCCEEEEecC------CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHh
Q 004952 420 LNGATLALYQG------SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (722)
Q Consensus 420 ~~G~~lv~~~~------~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 493 (722)
..|+++++.+. ..++..+++.|+++++|+++++|++++.|.+.......++++||.+++||+++++++.+++.+
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~ 310 (552)
T PRK09274 231 ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRA 310 (552)
T ss_pred hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHH
Confidence 57889888652 346789999999999999999999999998875545567899999999999999999999988
Q ss_pred hcc-CCcccccccccccccccccCCcC---------CcCccccccccCCCceEEEECC---------CCCcCCCCCCccc
Q 004952 494 KAW-YNAIIESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILDE---------CGVPYPDDQPCVG 554 (722)
Q Consensus 494 ~~~-~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~~~vld~---------~~~~~p~G~~giG 554 (722)
.++ +++++|.||+||++.++...... ......++|+|+++++++|+|+ +++++|.|+. |
T Consensus 311 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~--G 388 (552)
T PRK09274 311 MLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEI--G 388 (552)
T ss_pred HcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCe--e
Confidence 876 47999999999998644332211 1112247899999999999984 5678999985 9
Q ss_pred eEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHH
Q 004952 555 EVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 629 (722)
Q Consensus 555 el~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~ 629 (722)
||++. .||++ +++.|...|..++ .|.+||+|||+|++|+||+|+++||.||+||++|++|+|.|||+
T Consensus 389 el~v~g~~~~~GY~~------~~~~t~~~~~~~~--~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~ 460 (552)
T PRK09274 389 EIVVAGPMVTRSYYN------RPEATRLAKIPDG--QGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCER 460 (552)
T ss_pred EEEEecCcccccccC------ChHHhhhhhcccC--CCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHH
Confidence 99993 45555 4556665554332 23369999999999999999999999999999999999999999
Q ss_pred HHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc---CC-CeeecCCCCCC--CCchh
Q 004952 630 VCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL---NP-LFKVVPEFPRT--ASNKL 703 (722)
Q Consensus 630 ~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~---~p-~~~~v~~lP~t--~~GKv 703 (722)
+|. +||+|.+|+|++++++. + +.++++|++.++...+.++++++|++.+..+. .| .++++++||+| +||||
T Consensus 461 ~l~-~~p~V~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~~~GKi 537 (552)
T PRK09274 461 IFN-THPGVKRSALVGVGVPG-A-QRPVLCVELEPGVACSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIRHNAKI 537 (552)
T ss_pred HHH-hCcccceeEEEEeCCCC-C-ceEEEEEEccCccccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccccccccc
Confidence 995 99999999999998763 4 68899999988766666778888888887764 44 35589999999 79999
Q ss_pred hHHHHHHHHhhhhh
Q 004952 704 LRRVLRDQIKHELS 717 (722)
Q Consensus 704 dR~~L~~~~~~~~~ 717 (722)
||++|++++.+.++
T Consensus 538 ~r~~L~~~~~~~~~ 551 (552)
T PRK09274 538 FREKLAVWAAKQLK 551 (552)
T ss_pred cHHHHHHHHHHhhc
Confidence 99999999887654
No 39
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-65 Score=579.23 Aligned_cols=487 Identities=25% Similarity=0.293 Sum_probs=403.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|+++.+. ++||+||.+++.++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 15 ~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 86 (513)
T PRK07656 15 ARRFGDKEAYVFGDQ--------RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLN 86 (513)
T ss_pred HHHCCCCeEEEeCCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 367899999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
+.++.+++..++++++++++++++... +.........+. ..+++...... ........+|.++......
T Consensus 87 ~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 156 (513)
T PRK07656 87 TRYTADEAAYILARGDAKALFVLGLFL------GVDYSATTRLPALEHVVICETEED--DPHTEKMKTFTDFLAAGDP-- 156 (513)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhH------HHHHHHHhccCCccEEEEEcCccc--ccCccccccHHHHHhcCCC--
Confidence 999999999999999999999987532 111122222222 11222111110 0011123456666543321
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G 422 (722)
........++++++++|||||||.||+|.++|+++.+.+......+++++++++++..|+.|++++ ..++.++..|
T Consensus 157 ---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 233 (513)
T PRK07656 157 ---AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRG 233 (513)
T ss_pred ---CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcC
Confidence 112334577899999999999999999999999999888887788899999999999999999987 4578999999
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++..+++|
T Consensus 234 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~ 312 (513)
T PRK07656 234 ATILPLP-VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLT 312 (513)
T ss_pred ceEEecC-cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEe
Confidence 9998865 467889999999999999999999999999876655667899999999999999999999888775338999
Q ss_pred cccccccccccccCCcCCcC--ccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccc
Q 004952 503 SCGGTELSSAYIQGSLLQPQ--AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHE 575 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~--~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t 575 (722)
.||+||++++...+...... ...++|+|++++.++|+|++++++|.|+. |||++. .||++ ++..+
T Consensus 313 ~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~~ 384 (513)
T PRK07656 313 GYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEV--GELLVRGPNVMKGYYD------DPEAT 384 (513)
T ss_pred EEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCc--eEEEEEcchhhhhhcC------CHHHH
Confidence 99999998765544432222 25789999999999999999999999985 999993 45554 33445
Q ss_pred ccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceE
Q 004952 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (722)
Q Consensus 576 ~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~ 655 (722)
...|.. ..||+|||+|++++||.++++||.||+||++|.+|+|.|||++|. ++|+|.+++|++.+++..| +.
T Consensus 385 ~~~~~~------~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~i~~~~v~~~~~~~~g-~~ 456 (513)
T PRK07656 385 AAAIDA------DGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLY-EHPAVAEAAVIGVPDERLG-EV 456 (513)
T ss_pred hhhhcc------CCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHH-hCCCeeEEEEEecCCcccC-ce
Confidence 545432 239999999999999999999999999999999999999999995 9999999999999988777 88
Q ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHH
Q 004952 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRD 710 (722)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~ 710 (722)
+++||+.+++...+.++++++++++||.+++|. ++++++||+|++||++|++|++
T Consensus 457 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 457 GKAYVVLKPGAELTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999999987666777899999999999999994 5589999999999999999975
No 40
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-65 Score=575.71 Aligned_cols=466 Identities=22% Similarity=0.234 Sum_probs=385.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
++++||++|+++.+. ++||+||.++++++|++|.+...+|++|+|+++|++++++++|||+++|++++|+++
T Consensus 11 a~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 82 (487)
T PRK07638 11 ASLQPNKIAIKENDR--------VLTYKDWFESVCKVANWLNEKESKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDI 82 (487)
T ss_pred HHhCCCCeEEecCCc--------EeeHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCc
Confidence 468999999998776 999999999999999999988348999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
.++.+++.++++++++++++++....... . .....++.+. .+.+.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~------~----~~~~~~~~~~---------------~~~~~~~~~~~---- 133 (487)
T PRK07638 83 KWKQDELKERLAISNADMIVTERYKLNDL------P----DEEGRVIEID---------------EWKRMIEKYLP---- 133 (487)
T ss_pred cCCHHHHHHHHHhCCCCEEEEecccccch------h----hccceEEEeh---------------hhhhhhhhccc----
Confidence 99999999999999999999987432110 0 0011111111 11111111110
Q ss_pred CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEE
Q 004952 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (722)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (722)
.........+++++|+|||||||.||||+++|++++..+......+++.++|+++...++.|+.+++.++.++..|+++
T Consensus 134 -~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~ 212 (487)
T PRK07638 134 -TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTV 212 (487)
T ss_pred -cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEE
Confidence 1111223357789999999999999999999999988888777788899999999999999998888889999999999
Q ss_pred EEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccccc
Q 004952 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (722)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG 505 (722)
++.+ ..++..+++.|+++++|++.++|+++..|.+... . ..+.+.++++|+.++.+...++...+++++++|.||
T Consensus 213 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG 287 (487)
T PRK07638 213 HLMR-KFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYG 287 (487)
T ss_pred EEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEec
Confidence 9886 5688899999999999999999999999988632 1 345666788999999999999998888899999999
Q ss_pred ccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccccccee
Q 004952 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFR 580 (722)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~ 580 (722)
+||++..+............++|+|++++.++|+|++|+++|.|+. |||++. .||++ +++.+...+
T Consensus 288 ~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~~~~~~- 358 (487)
T PRK07638 288 ASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEI--GTVYVKSPQFFMGYII------GGVLARELN- 358 (487)
T ss_pred CCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCC--eEEEEecccceeeecC------CHHHHhhhc-
Confidence 9999876544433333456789999999999999999999999985 999983 34444 333333322
Q ss_pred ccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEE
Q 004952 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (722)
Q Consensus 581 ~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~v 660 (722)
..+||+|||+|++++||+++++||+||+||++|.+|+|.|||++|. +||+|.+|+|++.+++..| +.+++++
T Consensus 359 ------~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v 430 (487)
T PRK07638 359 ------ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLH-EHPAVDEIVVIGVPDSYWG-EKPVAII 430 (487)
T ss_pred ------cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEecCchhcC-CeeEEEE
Confidence 1239999999999999999999999999999999999999999995 9999999999999998777 7888888
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 661 VLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+. ..+.++++++++++|+.+++|. ++++++||+|++||++|++|++++.+.
T Consensus 431 ~~----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 431 KG----SATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred EC----CCCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcc
Confidence 74 2456899999999999999994 558999999999999999999987764
No 41
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-65 Score=573.15 Aligned_cols=474 Identities=21% Similarity=0.228 Sum_probs=394.2
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vp 262 (722)
+|+.+||++|+++++. .+||+||.++++++|++|++ . +++||+|+++++|++++++++|||+++|++++|
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 11 RAYLHPDRIAIITEEE--------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred HHHHCCCCeEEEECCc--------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 3478999999998766 99999999999999999986 5 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCC
Q 004952 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (722)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (722)
+++.++.+++..++++++++++++++... +....+...... ..+.+. ++.++.....
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~- 140 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQ------NMALSMQKVSYVQRVISIT---------------SLKEIEDRKI- 140 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHH------HHHHHhhhccCcceEEEec---------------chHhhhccCC-
Confidence 99999999999999999999999987542 111111111111 111111 1222222111
Q ss_pred CCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhh
Q 004952 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (722)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (722)
.......++++++++|||||||.||+|+++|+++..........+++.++|+++...|+.|..++ +.++.++.
T Consensus 141 ------~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 214 (496)
T PRK06839 141 ------DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLF 214 (496)
T ss_pred ------CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHh
Confidence 11123456899999999999999999999999987766666667788999999999999998887 44678899
Q ss_pred cCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcc
Q 004952 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (722)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l 500 (722)
.|+++++.+ ..++..++++++++++|++.++|++++.|+........+++++|.+++||++++++..+++... ++++
T Consensus 215 ~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~ 291 (496)
T PRK06839 215 AGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLF 291 (496)
T ss_pred cCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCee
Confidence 999998865 5688899999999999999999999999998766556678999999999999999998888775 6899
Q ss_pred cccccccccccccccCCc-CCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccccccc
Q 004952 501 IESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADH 574 (722)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~ 574 (722)
++.||+||++.++..... ......+++|+|++++.++|+|++++++|.|+. |||+|. +||++ +++.
T Consensus 292 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~ 363 (496)
T PRK06839 292 GQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEV--GELLIRGPNVMKEYWN------RPDA 363 (496)
T ss_pred EeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCc--eEEEEECCCcchhhcC------ChHH
Confidence 999999999864433222 223456789999999999999999999999985 999993 34444 4445
Q ss_pred cccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCce
Q 004952 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (722)
Q Consensus 575 t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~ 654 (722)
++..|. +| ||+|||++++++||.++++||.||+||++|.+|+|.|||++|. .+|+|.+++|++.+++..| +
T Consensus 364 ~~~~~~-----~g--~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~ 434 (496)
T PRK06839 364 TEETIQ-----DG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVIN-KLSDVYEVAVVGRQHVKWG-E 434 (496)
T ss_pred HHHHHc-----CC--CeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-c
Confidence 554442 12 9999999999999999999999999999999999999999995 9999999999999998887 8
Q ss_pred EEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
.++++|+++++...+.++++++++++|+.+++| .++++++||+|++||++|++|+++.++
T Consensus 435 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 435 IPIAFIVKKSSSVLIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred eEEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 999999998876777789999999999999999 566899999999999999999987754
No 42
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-65 Score=590.60 Aligned_cols=489 Identities=19% Similarity=0.195 Sum_probs=380.3
Q ss_pred CCCCCceEEEEecCC-CCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec-C
Q 004952 187 RKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-A 264 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl-~ 264 (722)
+.+||++|+++.+.. ...+..+.+||+||+++++++|++|.+.+++||+|+++++|++++++++|||+++|++++|+ +
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~ 111 (631)
T PRK07769 32 KVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFD 111 (631)
T ss_pred HhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCC
Confidence 578999999975421 01123458999999999999999997669999999999999999999999999999999999 5
Q ss_pred CCCC--HHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC----CcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 265 DSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 265 p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
+..+ .+++.+++++++++++|+++... +.........+ ..++.+... .+..
T Consensus 112 ~~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-- 168 (631)
T PRK07769 112 PAEPGHVGRLHAVLDDCTPSAILTTTDSA------EGVRKFFRARPAKERPRVIAVDAV---------------PDEV-- 168 (631)
T ss_pred CCccchHHHHHHHHHhCCCCEEEEChHHH------HHHHHHHhhccccccceEEEcccc---------------cccc--
Confidence 6665 68999999999999999987532 11111111111 111111100 0000
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (722)
.. ........++++++|+|||||||.||||+++|+++...+......+++.+++++++..|++|++++..++.+
T Consensus 169 -~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~ 242 (631)
T PRK07769 169 -GA-----TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLLP 242 (631)
T ss_pred -cc-----ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHHH
Confidence 00 011123457899999999999999999999999998888777777889999999999999999999888888
Q ss_pred hhcCCEEEEecC-CC--ChhhHHHHHHHhCC---cEEechhHHHHHHHhcC---C--CCCCCccceeEEEeecCCCCcch
Q 004952 419 FLNGATLALYQG-SP--LERSFGKFVQDAGV---TVLGTVPSLVKAWRNTN---C--LEGLDWTKIRSFASTGETSNVDD 487 (722)
Q Consensus 419 L~~G~~lv~~~~-~~--~~~~l~~~i~~~~v---t~l~~~P~~l~~l~~~~---~--~~~~~l~~Lr~i~~~Ge~l~~~~ 487 (722)
++.|+++++++. .. ++..+++.++++++ |++..+|+++..+.... . ....++++||.+++||+++++++
T Consensus 243 ~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~ 322 (631)
T PRK07769 243 ALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPAS 322 (631)
T ss_pred HhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHH
Confidence 899999998854 22 77889999999886 78999999887766421 1 11457899999999999999999
Q ss_pred HHHHHhhcc-----CCcccccccccccccccccCCcCCc--------------------------CccccccccCCCceE
Q 004952 488 DLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAGL 536 (722)
Q Consensus 488 ~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~~~~~ 536 (722)
.+++.+.++ ...++|.||+||++.+++....... ....++|+|++++.+
T Consensus 323 ~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~ 402 (631)
T PRK07769 323 MRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWA 402 (631)
T ss_pred HHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEE
Confidence 988887652 2469999999999765443221110 012478999999999
Q ss_pred EEEC-CCCCcCCCCCCccceEEE-----ecccCCCccccccccccccceecccc-----------CCCceecccCceEEE
Q 004952 537 VILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM-----------YKGMCLRRHGDIIKR 599 (722)
Q Consensus 537 ~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~-----------~~g~r~yrTGDl~~~ 599 (722)
+|+| ++|+++|.|+. |||++ ..||++ +++.|++.|...+. ..+.+||||||+|++
T Consensus 403 ~ivd~~~g~~~~~ge~--GEl~v~gp~v~~GY~~------~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~ 474 (631)
T PRK07769 403 VIVDPETASELPDGQI--GEIWLHGNNIGTGYWG------KPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVY 474 (631)
T ss_pred EEEcCCCCcCCCCCCE--EEEEecCCCccccccC------ChhHHHHHHhhhcccccccccccCcccCCCeeeccccccE
Confidence 9999 57999999995 99999 345554 56677778764211 123469999999999
Q ss_pred ecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcce--eEEEeecC-------------------CCCCceEEEE
Q 004952 600 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVSP-------------------AGGGPEVLVI 658 (722)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~--~~vv~~~~-------------------~~~g~~~l~a 658 (722)
+ ||+|+|+||+||+||++|+||+|.|||++|.+.||.|.+ ++|+++++ +..| +.+++
T Consensus 475 ~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~g-e~~~a 552 (631)
T PRK07769 475 F-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTS-EQLVI 552 (631)
T ss_pred E-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCC-ccEEE
Confidence 5 999999999999999999999999999999534899998 89999988 4456 88999
Q ss_pred EEEecCCC-CCCHHHHHHHHHHHHHh-hc-CCC-eeecC--CCCCCCCchhhHHHHHHHHhh
Q 004952 659 FVVLKKGF-TSQPDKLKMIFSKAIQS-KL-NPL-FKVVP--EFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 659 ~vv~~~~~-~~~~~~l~~~l~~~l~~-~~-~p~-~~~v~--~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+|++.++. ..+.++|.++++++|.. +. .|+ +.+++ +||+|++|||+|++|++.+.+
T Consensus 553 ~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 553 VAERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLD 614 (631)
T ss_pred EEEecCccccccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHc
Confidence 99988763 46778999999999996 45 474 44665 799999999999999988754
No 43
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.3e-65 Score=581.00 Aligned_cols=498 Identities=22% Similarity=0.269 Sum_probs=399.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 42 ~~~~p~~~a~~~~~~--------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 42 VARFGDRPALDFFGA--------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred HHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 368999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc-EEEEcCCCC-C-------------------CCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGN-D-------------------VGI 323 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-------------------~~~ 323 (722)
|.++.+++.+++++++++++|+++... .....+....... ++.+..... . ...
T Consensus 114 ~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
T PRK05605 114 PLYTAHELEHPFEDHGARVAIVWDKVA------PTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALT 187 (573)
T ss_pred cCCCHHHHHHHHhccCCcEEEechhhH------HHHHhhhhccccceeEeeecccccccccccccccccccccccccccc
Confidence 999999999999999999999986432 1111111111111 111110000 0 000
Q ss_pred CCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC-C-CCCCEEE
Q 004952 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-L-KVGDVYC 401 (722)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~-~-~~~d~~l 401 (722)
....+...|.++........ ..........++++++++|||||||.||||+++|+++...+......+. + ..+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 188 GPAPGTVPWETLVDAAIGGD-GSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVL 266 (573)
T ss_pred cCCCcceeHHHHhhcccccc-ccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEE
Confidence 01123345666554322100 0001223356789999999999999999999999998877664433322 2 3478999
Q ss_pred EecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeec
Q 004952 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (722)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~G 480 (722)
+..|+.|..+. ..++.++..|+++++.+ ..++..+++.|+++++|++.++|++++.|.+.......++++||.+++||
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg 345 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGA 345 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECC
Confidence 99999988886 45677899999999986 45788999999999999999999999999987665666789999999999
Q ss_pred CCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCC--CCcCCCCCCccceEEE
Q 004952 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC--GVPYPDDQPCVGEVGL 558 (722)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~--~~~~p~G~~giGel~v 558 (722)
++++++..+++.+.+ ++++++.||+||+++++...........+++|+|++++.++|+|++ ++++|.|+. |||++
T Consensus 346 ~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~--Gel~v 422 (573)
T PRK05605 346 MALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEE--GELLV 422 (573)
T ss_pred CcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCe--eEEEE
Confidence 999999988887654 5789999999999876555443333445789999999999999976 589999985 99999
Q ss_pred e-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhc
Q 004952 559 F-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (722)
Q Consensus 559 ~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (722)
. .||++ +++.++..|.. | ||+|||+|+++++|+++++||.||++|++|++|+|.|||++|.
T Consensus 423 ~~~~~~~gy~~------~~~~~~~~~~~-----g--~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~- 488 (573)
T PRK05605 423 RGPQVFKGYWN------RPEETAKSFLD-----G--WFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLR- 488 (573)
T ss_pred ecCchhhhhcC------ChhHhhhcccC-----C--CcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHH-
Confidence 3 34443 45556656542 3 9999999999999999999999999999999999999999995
Q ss_pred cCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHH
Q 004952 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQI 712 (722)
Q Consensus 634 ~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~ 712 (722)
.||.|.+++|++.++...+ +.+++++++.++...+.++|+++++++|+.+++|. ++++++||+|.+||++|++|++++
T Consensus 489 ~~~~i~~~~v~~~~~~~~~-~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~ 567 (573)
T PRK05605 489 EHPGVEDAAVVGLPREDGS-EEVVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREEL 567 (573)
T ss_pred hCcccceEEEEeeecccCC-eEEEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHH
Confidence 9999999999999988777 89999999988767788999999999999999995 558999999999999999999999
Q ss_pred hhhhh
Q 004952 713 KHELS 717 (722)
Q Consensus 713 ~~~~~ 717 (722)
.++++
T Consensus 568 ~~~~~ 572 (573)
T PRK05605 568 LEKLG 572 (573)
T ss_pred HHHhc
Confidence 77654
No 44
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-65 Score=576.51 Aligned_cols=508 Identities=20% Similarity=0.224 Sum_probs=394.4
Q ss_pred CCcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCC
Q 004952 165 GTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMT 243 (722)
Q Consensus 165 ~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s 243 (722)
+.|......+.....+.+. ++++||++|+++.+.. +.+||+||.++++++|++|.+. +++||+|+|+++|+
T Consensus 7 ~~~~~~~~~~~l~~~l~~~--a~~~p~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~ 78 (534)
T PRK05852 7 AAPMASDFGPRIADLVEVA--ATRLPEAPALVVTADR------IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSN 78 (534)
T ss_pred ccchhhhhcccHHHHHHHH--HHhCCCCcEEEecCCC------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCc
Confidence 3444333333333444433 3689999999875431 3799999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCC
Q 004952 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (722)
Q Consensus 244 ~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (722)
+++++++|||+++|++++|++|.++.+++.+++++++++++|++........ ....... ...+.+.....
T Consensus 79 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~---- 148 (534)
T PRK05852 79 AEFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA-----EPTTRWW-PLTVNVGGDSG---- 148 (534)
T ss_pred HHHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc-----ccccccc-ceeeeeccccc----
Confidence 9999999999999999999999999999999999999999999863211000 0000000 01111111000
Q ss_pred CCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEe
Q 004952 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWP 403 (722)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~ 403 (722)
........ ........ ..........++++++++|||||||.||||+++|+++.+.+......+++.++|++++.
T Consensus 149 -~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 223 (534)
T PRK05852 149 -PSGGTLSV-HLDAATEP---TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAV 223 (534)
T ss_pred -cccccccc-ccccccCC---CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEe
Confidence 00000000 00000000 00001111224778999999999999999999999999888887788899999999999
Q ss_pred cCccccchhH-HHHHHhhcCCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCC--CCCccceeEEEee
Q 004952 404 TNLGWVMGPV-ILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFAST 479 (722)
Q Consensus 404 ~~~~~~~~~~-~~~~~L~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~Lr~i~~~ 479 (722)
.|+.|..++. .++.+++.|+++++++. ..++..+++.|+++++|++.++|+++..|.+..... ..+++++|.++++
T Consensus 224 ~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~ 303 (534)
T PRK05852 224 MPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSC 303 (534)
T ss_pred cCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEEC
Confidence 9999999884 57888999999888653 446788999999999999999999999998764322 2356899999999
Q ss_pred cCCCCcchHHHHHhhccCCcccccccccccccccccCCcC------C-cCccccccccCCCceEEEECCCCCcCCCCCCc
Q 004952 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL------Q-PQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (722)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~------~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~g 552 (722)
|+++++.+.+++.+.+ ++++++.||+||++..++..... . ....+..|. .++++++|+|++|+++|.|+.
T Consensus 304 G~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~~~~~g~~- 380 (534)
T PRK05852 304 SAPLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGLPLPAGAV- 380 (534)
T ss_pred CCCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCCCCCCCCc-
Confidence 9999999999888776 57899999999998654433221 0 112233444 799999999999999999985
Q ss_pred cceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHH
Q 004952 553 VGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (722)
Q Consensus 553 iGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (722)
|||++. .||++ +++.|++.|.. | ||+|||+|++|+||++++.||+||+||++|.+|+|.||
T Consensus 381 -Gel~v~g~~v~~gY~~------~~~~t~~~~~~-----g--~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~i 446 (534)
T PRK05852 381 -GEVWLRGTTVVRGYLG------DPTITAANFTD-----G--WLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERV 446 (534)
T ss_pred -eEEEEecCcccchhcC------CcccchhhhcC-----C--CcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHH
Confidence 999983 45554 55566666642 2 99999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHH
Q 004952 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRR 706 (722)
Q Consensus 628 E~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~ 706 (722)
|++|. .||+|.+|+|++++++..+ +.++++|+.+++...+.+++.++++++||.+++| .++++++||+|++||++|+
T Consensus 447 E~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~vv~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~ 524 (534)
T PRK05852 447 EGVLA-SHPNVMEAAVFGVPDQLYG-EAVAAVIVPRESAPPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRR 524 (534)
T ss_pred HHHHH-hCCCeeeEEEEecCCcCcC-ceEEEEEEECCCCCCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHH
Confidence 99995 9999999999999988777 8899999987765577899999999999999999 5669999999999999999
Q ss_pred HHHHHHhh
Q 004952 707 VLRDQIKH 714 (722)
Q Consensus 707 ~L~~~~~~ 714 (722)
+|++.+.+
T Consensus 525 ~L~~~~~~ 532 (534)
T PRK05852 525 AVAEQFGH 532 (534)
T ss_pred HHHHHhcc
Confidence 99998854
No 45
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=8.1e-65 Score=573.21 Aligned_cols=490 Identities=21% Similarity=0.245 Sum_probs=403.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++|+++|+.+.++ .+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++
T Consensus 11 ~~~p~~~a~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 82 (515)
T TIGR03098 11 ARLPDATALVHHDR--------TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINP 82 (515)
T ss_pred HHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCC
Confidence 57899999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
.++.+++..+++++++++++++.... +.+.......+. ..+.+...... .........|+++......
T Consensus 83 ~~~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 152 (515)
T TIGR03098 83 LLKAEQVAHILADCNVRLLVTSSERL------DLLHPALPGCHDLRTLILVGEPAHA--SEGGGESPSWPKLLALGDA-- 152 (515)
T ss_pred CCCHHHHHHHHHcCCCeEEEEccchh------hhhHhhhhcccccceEEEecCcccc--cCCccccccHHHhhccccc--
Confidence 99999999999999999999986432 212222222211 12222211110 0111233456665543221
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (722)
........+++++++|||||||.||||+++|+++...+......+++.++|++++..|++|++++..++.++..|+
T Consensus 153 ----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 228 (515)
T TIGR03098 153 ----DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGA 228 (515)
T ss_pred ----cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCC
Confidence 1223345688999999999999999999999999888887777788999999999999999999988999999999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++++.+ ..++..+.+.++++++|++.++|+++..|.+... ...+++++|.+++||+++++.+.+.+.+.++++++++.
T Consensus 229 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 306 (515)
T TIGR03098 229 TVVLHD-YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLM 306 (515)
T ss_pred EEEEcC-CCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeee
Confidence 999886 4678899999999999999999999999987532 22457899999999999999999999888878889999
Q ss_pred ccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCccccccccccccc
Q 004952 504 CGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~ 578 (722)
||+||++..............+++|+|++++.++|+|+++++++.|+. ||+++ ..||++ +++.++..
T Consensus 307 YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~gy~~------~~~~~~~~ 378 (515)
T TIGR03098 307 YGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEE--GELVHRGALVAMGYWN------DPEKTAER 378 (515)
T ss_pred eccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCc--eEEEEcCchhhccccC------Cchhhhhh
Confidence 999998754333222223456789999999999999999999999985 99998 356665 44456666
Q ss_pred eecccc-----CCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCc
Q 004952 579 FRGMPM-----YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (722)
Q Consensus 579 f~~~p~-----~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~ 653 (722)
|...+. ..+.+||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .||.|.+|+|++++++..|
T Consensus 379 ~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g- 456 (515)
T TIGR03098 379 FRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAY-ATGLVAEAVAFGVPDPTLG- 456 (515)
T ss_pred hhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHh-cCCCeeEEEEEeccCcccC-
Confidence 655432 123458999999999999999999999999999999999999999995 9999999999999998877
Q ss_pred eEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHH
Q 004952 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRD 710 (722)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~ 710 (722)
+.++++++...+...+.++++++++++|+.++.|. ++++++||+|++||++|++|++
T Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 457 QAIVLVVTPPGGEELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred ceEEEEEEeCCCCCCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 88999998766666778899999999999999995 5589999999999999999964
No 46
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-65 Score=579.95 Aligned_cols=468 Identities=18% Similarity=0.151 Sum_probs=362.0
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
++++|+++|+++.+. +.++++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+++|++++ ++|
T Consensus 12 ~~~~~~~~a~~~~~~----~~~~~~ty~el~~~~~~lA~~L~~~-~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~ 85 (525)
T PRK05851 12 MTASGRDLVVLDRES----GLWRRHPWPEVHGRAENVAARLLDR-DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILP 85 (525)
T ss_pred hcCCCCceEEeCCCC----CcceeecHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCC
Confidence 478899999998653 2356999999999999999999988 8999999999999999999999999999875 444
Q ss_pred C--------CCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhc
Q 004952 266 S--------FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (722)
Q Consensus 266 ~--------~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (722)
. ...+++.+++++++++++|+++... ..+..... . +.+. .+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~-~-~~~~---------------~~~~~~~ 139 (525)
T PRK05851 86 GPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAVDS-S-VTVH---------------DLATAAH 139 (525)
T ss_pred CCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHhhc-c-cccc---------------ccccccc
Confidence 2 2345667789999999999986432 11111000 0 0000 0000000
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCC-CCCEEEEecCccccchhHHHH
Q 004952 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK-VGDVYCWPTNLGWVMGPVILF 416 (722)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~ 416 (722)
.. .. .+.....+++++||+|||||||.||||+++|+++.+.+.+....++++ ++|+++++.|++|+++++.++
T Consensus 140 ~~----~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 213 (525)
T PRK05851 140 TN----RS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLL 213 (525)
T ss_pred cc----cc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHH
Confidence 00 00 001123578999999999999999999999999999888887888888 899999999999999998899
Q ss_pred HHhhcCCEEEEecCC-C--ChhhHHHHHHHhCCcEEechhHHHHHHHhcCC-CCCCCccceeEEEeecCCCCcchHHHHH
Q 004952 417 SSFLNGATLALYQGS-P--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-LEGLDWTKIRSFASTGETSNVDDDLWLS 492 (722)
Q Consensus 417 ~~L~~G~~lv~~~~~-~--~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~-~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~ 492 (722)
.+++.|+++++.+.. + ++..+++.++++++|++..+|.++..+..... ....++++||.+++||+++++++.+++.
T Consensus 214 ~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 293 (525)
T PRK05851 214 TAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFA 293 (525)
T ss_pred HHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHH
Confidence 999999999997631 2 56789999999999988766666665543321 2345678999999999999999988877
Q ss_pred hhc-----cCCcccccccccccccccccCCcC--------------CcCccccccccCCCceEEEECCCC-CcCCCCCCc
Q 004952 493 SKA-----WYNAIIESCGGTELSSAYIQGSLL--------------QPQAFGAFSTATMTAGLVILDECG-VPYPDDQPC 552 (722)
Q Consensus 493 ~~~-----~~~~l~n~YG~TE~~~~~~~~~~~--------------~~~~~~~iG~p~~~~~~~vld~~~-~~~p~G~~g 552 (722)
+.+ +..+++|.||+||++.+++..... .....+++|+|++|++++|+|+++ .++|.|+.
T Consensus 294 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~- 372 (525)
T PRK05851 294 TAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREI- 372 (525)
T ss_pred HHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCe-
Confidence 642 123599999999998654432211 012346899999999999999776 46899985
Q ss_pred cceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHH
Q 004952 553 VGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (722)
Q Consensus 553 iGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (722)
|||++. .||++++ +.+ .++||+|||+|+++ +|+|+|+||+||+||++|+||+|.||
T Consensus 373 -GEl~v~g~~~~~GY~~~~------~~~-----------~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eI 433 (525)
T PRK05851 373 -GEIEIRGASMMSGYLGQA------PID-----------PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEI 433 (525)
T ss_pred -EEEEEecCchhhccccCC------ccC-----------CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHH
Confidence 999993 4555532 111 12499999999986 89999999999999999999999999
Q ss_pred HHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhh--cCCC-eeecC--CCCCCCCch
Q 004952 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK--LNPL-FKVVP--EFPRTASNK 702 (722)
Q Consensus 628 E~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~--~~p~-~~~v~--~lP~t~~GK 702 (722)
|++|. +||+|.+|+|++++++..+ +.+.++|+... ...+.++++++++++|+.+ ++|. +++++ +||+|+|||
T Consensus 434 E~~l~-~~p~V~~~~vv~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GK 510 (525)
T PRK05851 434 ERVAA-QVRGVREGAVVAVGTGEGS-ARPGLVIAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGK 510 (525)
T ss_pred HHHHH-hCCCcccceEEEEEecCCC-CceeEEEEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchH
Confidence 99995 9999999999999987776 66777766542 1234578889999999998 8994 55887 899999999
Q ss_pred hhHHHHHHHHhh
Q 004952 703 LLRRVLRDQIKH 714 (722)
Q Consensus 703 vdR~~L~~~~~~ 714 (722)
|+|++|++.+++
T Consensus 511 i~r~~L~~~~~~ 522 (525)
T PRK05851 511 LRRLAVKRSLEA 522 (525)
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 47
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-64 Score=577.41 Aligned_cols=505 Identities=19% Similarity=0.218 Sum_probs=405.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+.+ +.+||+||.++++++|++|.+. +++||+|++++++++++++++|||+++|++++|++
T Consensus 28 ~~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~ 101 (558)
T PRK12583 28 VARFPDREALVVRHQA------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNIN 101 (558)
T ss_pred HHHCCCCeEEEecCCC------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecC
Confidence 3689999999885432 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc-------------CCCcEEEEcCCCCCCCCCCCCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------------APLKAIVLPAIGNDVGIPLREQDLS 331 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (722)
|.++.+++.+++++++++++++++..... +........... .+....++..... .......
T Consensus 102 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 175 (558)
T PRK12583 102 PAYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPA-----PPPGFLA 175 (558)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhccccccccccccCCcceEEEEecCC-----CCccccc
Confidence 99999999999999999999998643211 111111111110 0111111111100 0112234
Q ss_pred HHHHhcccCCCC-CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccc
Q 004952 332 WKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVM 410 (722)
Q Consensus 332 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (722)
|++......... ...........++++++++|||||||.||||.++|+++.+.+......+++.++|+++...|+.|..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 255 (558)
T PRK12583 176 WHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCF 255 (558)
T ss_pred hHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 544433221100 0001111234578899999999999999999999999988888777788999999999999999998
Q ss_pred hh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHH
Q 004952 411 GP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDL 489 (722)
Q Consensus 411 ~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~ 489 (722)
+. +.++.++..|++++++....++..+++.++++++|++.++|+++..++........++++||.+++||+++++++.+
T Consensus 256 g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~ 335 (558)
T PRK12583 256 GMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMR 335 (558)
T ss_pred hHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHH
Confidence 87 56788899999999876667888999999999999999999999988876554556789999999999999999999
Q ss_pred HHHhhccCCcccccccccccccccccCCcC--CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----ccc
Q 004952 490 WLSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLY 562 (722)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y 562 (722)
++.+.++..++++.||+||++.++...... ......++|+|++++.++|+|+++++++.|+. |||++. .||
T Consensus 336 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy 413 (558)
T PRK12583 336 RVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEI--GELCTRGYSVMKGY 413 (558)
T ss_pred HHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCe--eEEEEEeCccchhh
Confidence 998888777899999999999765443221 12345789999999999999999999999985 999983 445
Q ss_pred CCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeE
Q 004952 563 LGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETA 642 (722)
Q Consensus 563 ~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~ 642 (722)
++ +++.+...|.. .+||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .||+|.+++
T Consensus 414 ~~------~~~~~~~~~~~------~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~ 480 (558)
T PRK12583 414 WN------NPEATAESIDE------DGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLF-THPAVADVQ 480 (558)
T ss_pred cC------ChHHHHhhcCC------CCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHH-hCCCeeEEE
Confidence 44 44445444432 249999999999999999999999999999999999999999995 899999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 643 AISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 643 vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
|++++++..+ +.++++++..++...+..+++++++++||.+++|. ++.+++||+|++||++|++|+++..++++.
T Consensus 481 v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~~~~ 556 (558)
T PRK12583 481 VFGVPDEKYG-EEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEELAL 556 (558)
T ss_pred EEeeecCCCC-cEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhhcCC
Confidence 9999988777 88999999887666677899999999999999995 558999999999999999999998776654
No 48
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=7.5e-65 Score=579.16 Aligned_cols=504 Identities=20% Similarity=0.235 Sum_probs=406.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 26 ~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 99 (559)
T PRK08315 26 AARYPDREALVYRDQG------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTIN 99 (559)
T ss_pred HHHCCCCeEEEEcCCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecC
Confidence 4689999999985432 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC-------------CC--cEEEEcCCCCCCCCCCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------------PL--KAIVLPAIGNDVGIPLREQD 329 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~~~~~~~ 329 (722)
|.++.+++..++++++++++++++..... ............. +. ..+.+.. . ...+.
T Consensus 100 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~ 171 (559)
T PRK08315 100 PAYRLSELEYALNQSGCKALIAADGFKDS-DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD--E-----KHPGM 171 (559)
T ss_pred ccCCHHHHHHHHHhcCCCEEEEecccccc-chHHHHHHhhhhhhcccccccccccCCCceeEEeecc--c-----CCccc
Confidence 99999999999999999999998753210 0011111111110 00 1111110 0 01123
Q ss_pred CCHHHHhcccCCCC-CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccc
Q 004952 330 LSWKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGW 408 (722)
Q Consensus 330 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 408 (722)
..+.++........ ...........+++++|++|||||||.||||.++|+++...+......++++++|+++...|+.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 251 (559)
T PRK08315 172 LNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYH 251 (559)
T ss_pred ccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHH
Confidence 45555544321100 00011122345788999999999999999999999999988888778889999999999999998
Q ss_pred cchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcch
Q 004952 409 VMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDD 487 (722)
Q Consensus 409 ~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~ 487 (722)
..+. +.++.++..|+++++.....++..+++.++++++|++.++|+++..++........++++||.+++||+++++++
T Consensus 252 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~ 331 (559)
T PRK08315 252 CFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEV 331 (559)
T ss_pred HHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHH
Confidence 8887 568899999999997766678889999999999999999999999988766555567899999999999999999
Q ss_pred HHHHHhhccCCcccccccccccccccccCCcCC--cCccccccccCCCceEEEECCC-CCcCCCCCCccceEEE-----e
Q 004952 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL-----F 559 (722)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~~~vld~~-~~~~p~G~~giGel~v-----~ 559 (722)
.+.+.+.++..+++|.||+||++.+++...... .....++|+|++++.++|+|++ ++++|.|+. |||+| .
T Consensus 332 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--GEl~v~g~~~~ 409 (559)
T PRK08315 332 MKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQ--GELCTRGYSVM 409 (559)
T ss_pred HHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCc--eEEEEECchhh
Confidence 988888776667999999999986544333222 2345789999999999999987 999999996 99998 3
Q ss_pred cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcc
Q 004952 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (722)
Q Consensus 560 ~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (722)
.||++ +++.++..|.. .+||+|||+|++++||.++|+||.||+||++|+||++.|||++|. .+|+|.
T Consensus 410 ~gy~~------~~~~~~~~~~~------~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~-~~~~v~ 476 (559)
T PRK08315 410 KGYWN------DPEKTAEAIDA------DGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLY-THPKIQ 476 (559)
T ss_pred hhhcC------ChhHHhhcCCC------CCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHH-hCCCce
Confidence 46665 44455555532 239999999999999999999999999999999999999999995 999999
Q ss_pred eeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 640 ETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 640 ~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
+++|++++++..+ +.+++||++.++...+.++++++++++||.|++|. ++++++||+|+|||++|++|++++......
T Consensus 477 ~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~~~~ 555 (559)
T PRK08315 477 DVQVVGVPDEKYG-EEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIEELGL 555 (559)
T ss_pred EEEEEecCCCCCC-eEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHhhhch
Confidence 9999999988766 88999999887666677899999999999999995 558999999999999999999987776544
Q ss_pred c
Q 004952 719 R 719 (722)
Q Consensus 719 ~ 719 (722)
+
T Consensus 556 ~ 556 (559)
T PRK08315 556 Q 556 (559)
T ss_pred h
Confidence 3
No 49
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.4e-65 Score=574.49 Aligned_cols=483 Identities=20% Similarity=0.225 Sum_probs=393.7
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++||++|+++.+. ++||+||.++++++|+.|++. +++||+|++++++++++++++|||+++|++++|+++
T Consensus 18 ~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~~ 89 (528)
T PRK07470 18 RRFPDRIALVWGDR--------SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTNF 89 (528)
T ss_pred HHCCCceEEEECCc--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecCc
Confidence 68999999998766 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
.++.+++.+++++++++.++++++... ....+...... ..+.+.. . .....+.++......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~-- 152 (528)
T PRK07470 90 RQTPDEVAYLAEASGARAMICHADFPE------HAAAVRAASPDLTHVVAIGG--A-------RAGLDYEALVARHLG-- 152 (528)
T ss_pred cCCHHHHHHHHHhcCceEEEEcchhHH------HHHHHHhhCCcCceEEEeCC--C-------cccccHHHHHhcCCC--
Confidence 999999999999999999999975421 11112111111 1222211 1 012356665543221
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhh--cCCCCCCEEEEecCccccchhHHHHHHhhc
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (722)
.........++++++++|||||||.||||+++|+++...+...... .+..++|+++...|++|+.++..++ .++.
T Consensus 153 --~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~ 229 (528)
T PRK07470 153 --ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVAR 229 (528)
T ss_pred --CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhc
Confidence 1122234567899999999999999999999999987654433222 2567889999999999999887554 6788
Q ss_pred CCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcc
Q 004952 422 GATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (722)
Q Consensus 422 G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l 500 (722)
|+++++++. ..++..+++.|+++++|++.++|++++.+.+.......+++++|.+++||+++++....++...+ +.++
T Consensus 230 g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~ 308 (528)
T PRK07470 230 GAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVL 308 (528)
T ss_pred CceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHH
Confidence 888877753 45788899999999999999999999999887655556789999999999999999888877665 4689
Q ss_pred cccccccccccccccCCcC-------CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccc
Q 004952 501 IESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDR 568 (722)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~ 568 (722)
++.||+||++..+...... .....+++|.|++++.++|+|++|++++.|+. |||++. .||++
T Consensus 309 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~i~~~~~~~gy~~---- 382 (528)
T PRK07470 309 VQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET--GEICVIGPAVFAGYYN---- 382 (528)
T ss_pred HHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc--eEEEEeCCccchhhcC----
Confidence 9999999998654433211 12234688999999999999999999999985 999983 45554
Q ss_pred cccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecC
Q 004952 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (722)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~ 648 (722)
+++.++..|. +.||+|||+|++++||+++++||+||+||++|+||+|.|||++|. ++|+|.+|+|++.++
T Consensus 383 --~~~~~~~~~~-------~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~ 452 (528)
T PRK07470 383 --NPEANAKAFR-------DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLL-THPAVSEVAVLGVPD 452 (528)
T ss_pred --CHHHHHhhhc-------CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHH-hCCCceEEEEEeccC
Confidence 4445555553 139999999999999999999999999999999999999999995 999999999999998
Q ss_pred CCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+..| +.++++++..++...+.++++++|+++||.+++|. ++++++||+|+|||++|+.|++++++.
T Consensus 453 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 453 PVWG-EVGVAVCVARDGAPVDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred cccC-ceeEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 8777 78899999887766778899999999999999994 668999999999999999999987664
No 50
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.4e-64 Score=574.43 Aligned_cols=489 Identities=19% Similarity=0.201 Sum_probs=393.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++...+ +.+||+||.++++++|+.|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 38 a~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 38 AELYADKVAFVEAVTG------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGAN 111 (546)
T ss_pred hhcCCCccEEEecCCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCC
Confidence 3678999999874321 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
+.++.+++.+++++++++++++++...... .......+++.... ......|.+++..... .
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~----------~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~--~ 172 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGKV----------KGLGLPVIVLGEEK-------IEGAVNWKELLEAADR--A 172 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhhH----------hhcCCcEEEecCCC-------CCCcccHHHHHhhccc--c
Confidence 999999999999999999999997543211 11112233332111 1123457776654322 1
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC--CCCCCEEEEecCccccchhH-HHHHHhhc
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~~~~L~~ 421 (722)
..........++++++++|||||||.||||+++|+++...+......++ ....++++...|+.|.++.. .++.+|..
T Consensus 173 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~ 252 (546)
T PLN02330 173 GDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRN 252 (546)
T ss_pred CcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhc
Confidence 1111223345689999999999999999999999998876543221111 22345788889999988874 56788999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCcc--ceeEEEeecCCCCcchHHHHHhhccCCc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT--KIRSFASTGETSNVDDDLWLSSKAWYNA 499 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~--~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~ 499 (722)
|+++++.+ ..++..+++.++++++|++.++|+++..|+........+++ ++|.+++||+++++++.+++.+.+++++
T Consensus 253 g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~ 331 (546)
T PLN02330 253 KGKVVVMS-RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQ 331 (546)
T ss_pred CCEEEEec-ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCe
Confidence 99999886 56788999999999999999999999999876544444444 4799999999999999999998888899
Q ss_pred ccccccccccccccccCCcCC----cCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEe-----cccCCCcccc
Q 004952 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF-----PLYLGASDRL 569 (722)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~-----~~y~~~~~~~ 569 (722)
+++.||+||++++........ .....++|+|++|++++|+| ++++++|.|+. |||++. .||++
T Consensus 332 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~--Gel~v~g~~~~~gy~~----- 404 (546)
T PLN02330 332 VQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP--GELCVRSQCVMQGYYN----- 404 (546)
T ss_pred EEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc--eEEEEecchhhhhhcc-----
Confidence 999999999975443321111 12345899999999999999 57899999995 999983 45555
Q ss_pred ccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCC
Q 004952 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (722)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~ 649 (722)
+++.+++.|. .++||+|||+|++++||+++++||.||+||++|++|+|.|||++|. +||+|.+++|++++++
T Consensus 405 -~~~~~~~~~~------~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~ 476 (546)
T PLN02330 405 -NKEETDRTID------EDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILL-THPSVEDAAVVPLPDE 476 (546)
T ss_pred -Cccchhhhcc------CCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHH-hCCchheEEEEecccc
Confidence 4445555543 2349999999999999999999999999999999999999999995 9999999999999988
Q ss_pred CCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
..| +.++++|++.++...+.++++++++++|+.|+.|. ++.+++||+|++||++|++|++++...-
T Consensus 477 ~~g-~~~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~ 543 (546)
T PLN02330 477 EAG-EIPAACVVINPKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSIN 543 (546)
T ss_pred ccC-ceeEEEEEECCCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhh
Confidence 777 88999999887666677899999999999999995 6689999999999999999999987653
No 51
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.1e-65 Score=582.38 Aligned_cols=497 Identities=17% Similarity=0.143 Sum_probs=384.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|++++++ .+||+||.++++++|.+|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 47 a~~~p~~~Ai~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~ 118 (600)
T PRK08279 47 AARHPDRPALLFEDQ--------SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLN 118 (600)
T ss_pred HHhCCCCcEEEeCCC--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 368999999999877 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
+.++.+++.+++++++++++|++++.. +....+...... ..+.+...... .....+.++.......+
T Consensus 119 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 119 TQQRGAVLAHSLNLVDAKHLIVGEELV------EAFEEARADLARPPRLWVAGGDTL------DDPEGYEDLAAAAAGAP 186 (600)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHhhhhcccceEEEecCccc------cccccHHHHhhhcccCC
Confidence 999999999999999999999987532 112222221111 22222111100 00123334332221100
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHH-HHHHhhcC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNG 422 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G 422 (722)
...........+++++||+|||||||.||||+++|+++++.+.+....++++++|++++..|++|.+++.. ++.++..|
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 266 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAG 266 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcC
Confidence 11111223345689999999999999999999999999999988888899999999999999999999854 45667788
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++++.+ ..++..+++.++++++|++.++|++++.++...........++|.+ +|+.+++++.+++...++...++|
T Consensus 267 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 267 ATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred cEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 8887765 5678889999999999999999999999987654333345677754 477899999999888877667999
Q ss_pred cccccccccccccCCcCCcCccccccccCC----Cce---------EEEECCCC--CcCCCCCCccceEEE---ecccCC
Q 004952 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATM----TAG---------LVILDECG--VPYPDDQPCVGEVGL---FPLYLG 564 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~----~~~---------~~vld~~~--~~~p~G~~giGel~v---~~~y~~ 564 (722)
.||+||++..+... ....+++|++.+ +.. ..|.|.++ .+++.|+. ||+++ +++.+.
T Consensus 344 ~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 FYAASEGNVGFINV----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEV--GLLIGRITDRGPFD 417 (600)
T ss_pred eecccccceeeccc----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCc--eeEEEEecCccccc
Confidence 99999988643321 123345666555 332 23344333 35788885 99984 233222
Q ss_pred CccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEE
Q 004952 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (722)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv 644 (722)
+|.++..|+..|..+++.++.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|+
T Consensus 418 ---GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~-~~p~V~~a~v~ 493 (600)
T PRK08279 418 ---GYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALS-GFPGVEEAVVY 493 (600)
T ss_pred ---ccCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHh-cCCCcceEEEE
Confidence 23466677777776666666789999999999999999999999999999999999999999996 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 645 SVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+++++..+....+++++..++...+.++++++|+++||.|++|. ++++++||+|+|||++|++|++++.+.
T Consensus 494 gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 494 GVEVPGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred EeecCCCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 99876533245666676665556778999999999999999995 558999999999999999999987665
No 52
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-64 Score=566.40 Aligned_cols=476 Identities=21% Similarity=0.218 Sum_probs=395.8
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||.||.++++++|.+|.+. +++|++|++++++++++++++|||+++|++++|++
T Consensus 12 ~~~~~~~~a~~~~~~--------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 83 (497)
T PRK06145 12 ARRTPDRAALVYRDQ--------EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPIN 83 (497)
T ss_pred HHHCCCceEEEECCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 368899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
+.++.+++.+++++++++++++++..... .. .....+.+..... ..+..+.....
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~~-~~~~~~~~~~~~~----------~~~~~~~~~~~---- 138 (497)
T PRK06145 84 YRLAADEVAYILGDAGAKLLLVDEEFDAI----------VA-LETPKIVIDAAAQ----------ADSRRLAQGGL---- 138 (497)
T ss_pred cccCHHHHHHHHHhcCCcEEEEccchhhh----------hh-cccceEEecCccc----------chhHHHhccCC----
Confidence 99999999999999999999998753211 00 0111122211000 01111111000
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCC
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGA 423 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~ 423 (722)
.........++++++++|||||||.||||+++|+++..........+++..+++++...|+.|..++ +..+.+++.|+
T Consensus 139 -~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~ 217 (497)
T PRK06145 139 -EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGG 217 (497)
T ss_pred -CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccC
Confidence 0011123467899999999999999999999999998776666677889999999999999998877 44577899999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++++.+ ..++..+++.++++++|++.++|++++.++........+++++|.+++|||++++.+.+++.+.+++.++++.
T Consensus 218 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~ 296 (497)
T PRK06145 218 TLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDA 296 (497)
T ss_pred EEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEe
Confidence 999876 4678899999999999999999999999988765555678899999999999999999999888878899999
Q ss_pred ccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccccc
Q 004952 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~ 577 (722)
||+||++..++..... .....+++|+|+++++++|+|++++++|.|+. |||++. .||++ +++.++.
T Consensus 297 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~Gy~~------~~~~~~~ 368 (497)
T PRK06145 297 YGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMK--GEICMRGPKVTKGYWK------DPEKTAE 368 (497)
T ss_pred ecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCc--eEEEEECcchhhhhcC------ChHHHHH
Confidence 9999998754433221 22345689999999999999999999999985 999983 45555 4556666
Q ss_pred ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 578 ~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
.|.. .||+|||+|+++.||+++++||+||+||++|++|+|.|||+.|. .+|+|.+++|++.+++..+ +.++
T Consensus 369 ~~~~-------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 439 (497)
T PRK06145 369 AFYG-------DWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIY-ELPEVAEAAVIGVHDDRWG-ERIT 439 (497)
T ss_pred HHhC-------CCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEecCCCccC-ceEE
Confidence 6642 39999999999999999999999999999999999999999995 9999999999999988777 8899
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHh
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIK 713 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~ 713 (722)
+++++.++...+.++++++++++|+.+++|. ++.+++||+|++||++|++|+++++
T Consensus 440 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 440 AVVVLNPGATLTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEECCCCCCCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 9999987666677899999999999999994 5589999999999999999998765
No 53
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-64 Score=570.24 Aligned_cols=489 Identities=22% Similarity=0.245 Sum_probs=410.5
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++.+|+++|+.+.+. .+||+||.++++++|+.|.+. +++|++|++++++++++++++|||+++|++++|+
T Consensus 15 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~ 86 (521)
T PRK06187 15 GARKHPDKEAVYFDGR--------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPI 86 (521)
T ss_pred HHHHCCCceEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEec
Confidence 3478999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (722)
++.++.+++..+++.+++++++++.... +.+..+....+. +.+++...... ........+.+++.....
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 87 NIRLKPEEIAYILNDAEDRVVLVDSEFV------PLLAAILPQLPTVRTVIVEGDGPAA---PLAPEVGEYEELLAAASD 157 (521)
T ss_pred ccCCCHHHHHHHHHhcCCeEEEEcchHH------HHHHHHhhccCCccEEEEecCcccc---ccccccccHHHHhhcCCc
Confidence 9999999999999999999999997532 222333333332 23333221110 112234556666554332
Q ss_pred CCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhc
Q 004952 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (722)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (722)
........++++++++|||||||.||+|.++|+++.+........+++++++++++.+++.|..++...+.++..
T Consensus 158 -----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 158 -----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred -----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 122234567889999999999999999999999999888888888999999999999999999988777779999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
|+++++++.. ++..+++.++++++|++.++|++++.|.........++++||.+++|||+++++..+++.+.+ +++++
T Consensus 233 G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~ 310 (521)
T PRK06187 233 GAKQVIPRRF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLV 310 (521)
T ss_pred CCEEEecCCC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchh
Confidence 9999998764 888999999999999999999999999988766567789999999999999999999988876 78999
Q ss_pred ccccccccccccccCCcCCc-----CccccccccCCCceEEEECCCCCcCCC--CCCccceEEEe-----cccCCCcccc
Q 004952 502 ESCGGTELSSAYIQGSLLQP-----QAFGAFSTATMTAGLVILDECGVPYPD--DQPCVGEVGLF-----PLYLGASDRL 569 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~-----~~~~~iG~p~~~~~~~vld~~~~~~p~--G~~giGel~v~-----~~y~~~~~~~ 569 (722)
|.||+||++.+......... ....++|+|++++.++|+|++++++|. |+. |||++. .+|++
T Consensus 311 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~v~~~~~~~~y~~----- 383 (521)
T PRK06187 311 QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEV--GEIIVRGPWLMQGYWN----- 383 (521)
T ss_pred eeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCe--eEEEEECcchhhhhcC-----
Confidence 99999999865544433222 256789999999999999999999998 774 999993 34443
Q ss_pred ccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCC
Q 004952 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (722)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~ 649 (722)
+++.+.+.|.. + ||+|||+++++++|.+++.||.||+||++|.+|+|.+||+.|. .+|+|.+++|++.+++
T Consensus 384 -~~~~~~~~~~~-----~--~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~ 454 (521)
T PRK06187 384 -RPEATAETIDG-----G--WLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALY-GHPAVAEVAVIGVPDE 454 (521)
T ss_pred -CHHHHHHHhhC-----C--ceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHH-hCCCceEEEEEeccCC
Confidence 34445545532 3 9999999999999999999999999999999999999999995 9999999999999887
Q ss_pred CCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
..+ +.++++++++++...+..+++++++++|+.++.| .++++++||+|++||++|+.|++++.+
T Consensus 455 ~~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 455 KWG-ERPVAVVVLKPGATLDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred CcC-ceEEEEEEECCCCCCCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 777 8999999998876677889999999999999999 566899999999999999999999875
No 54
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-64 Score=570.26 Aligned_cols=492 Identities=20% Similarity=0.221 Sum_probs=391.1
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
..+|+++++.+... +..+.+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 21 ~~~~~~~~~~~~~~----~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 96 (539)
T PRK07008 21 RHAGDTEIVSRRVE----GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINP 96 (539)
T ss_pred hhCCCceEEEeecc----CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 57788888765321 1234899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc--EEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
.++.+++.++++++++++++++.... +....+....... .+.+....... . ......+++++......
T Consensus 97 ~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~-- 166 (539)
T PRK07008 97 RLFPEQIAYIVNHAEDRYVLFDLTFL------PLVDALAPQCPNVKGWVAMTDAAHLP-A-GSTPLLCYETLVGAQDG-- 166 (539)
T ss_pred ccCHHHHHHHHhccCCcEEEEcchhH------HHHHHHHhhCCCceEEEEEccCCccc-c-CCcccccHHHHhcccCC--
Confidence 99999999999999999999987532 1222222222221 12222111100 0 01124556666543221
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHH--HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhc
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT--AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (722)
........++++++++|||||||.||||+++|++++... ......+++.++|+++...|++|..+...++.++..
T Consensus 167 ---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~ 243 (539)
T PRK07008 167 ---DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLT 243 (539)
T ss_pred ---CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhc
Confidence 111223467889999999999999999999999986433 223346788899999999999887776556788999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
|+++++.+...++..+++.+++++||++.++|+++..|++.......++++||.++++|+++++.+.+++...+ +++++
T Consensus 244 G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~ 322 (539)
T PRK07008 244 GAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVI 322 (539)
T ss_pred CceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCcee
Confidence 99999987667888999999999999999999999999887655556789999999999999999999887766 68999
Q ss_pred ccccccccccccccCCcC------Cc----CccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCc
Q 004952 502 ESCGGTELSSAYIQGSLL------QP----QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGAS 566 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~------~~----~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~ 566 (722)
+.||+||++..++..... .+ ....++|+|++++.++|+|++++++|.+...+|||++. .||++.
T Consensus 323 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~- 401 (539)
T PRK07008 323 HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRG- 401 (539)
T ss_pred cccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchhhcCC-
Confidence 999999998644332211 00 11357899999999999999999998653225999984 345442
Q ss_pred cccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEee
Q 004952 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISV 646 (722)
Q Consensus 567 ~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~ 646 (722)
+ . .|+.. +||+|||+|++++||.++++||+||+||++|++|+|.|||++|. .||.|.+++|+++
T Consensus 402 -----~---~-----~~~~~--g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~v~~~~v~~~ 465 (539)
T PRK07008 402 -----D---A-----SPLVD--GWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV-AHPAVAEAACIAC 465 (539)
T ss_pred -----h---h-----hhhcC--CCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH-hCCceeEEEEEec
Confidence 2 1 12222 39999999999999999999999999999999999999999995 9999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 647 SPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 647 ~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
++...+ +.++++|+..++...+.++++++++++|+.|+.|. ++++++||+|+|||++|++|++++.+
T Consensus 466 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~ 533 (539)
T PRK07008 466 AHPKWD-ERPLLVVVKRPGAEVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRD 533 (539)
T ss_pred CCchhc-cceEEEEEeCCCCccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHh
Confidence 988777 78899998887666777899999999999999995 55899999999999999999998765
No 55
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.4e-64 Score=570.49 Aligned_cols=491 Identities=20% Similarity=0.217 Sum_probs=391.6
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|+++.+.. .+..+.+||+||+++++++|.+|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 32 ~~~~p~~~a~~~~~~~--~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 109 (538)
T TIGR03208 32 VANCPDKPALTAYRDG--HGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLM 109 (538)
T ss_pred HHHCCCceEEEeeccc--CCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccC
Confidence 3678999999864220 12234899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
|.++.+++.+++++++++++++++... ...............+. .++++... ....+++++......
T Consensus 110 ~~~~~~~l~~~l~~~~~~~li~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 178 (538)
T TIGR03208 110 PIFRERELSFMLNHADSKVFVVPSVFR-GFDHAAMARELQSKLPALRQVVVIDGD----------GDDSFDRVLMTPERD 178 (538)
T ss_pred cccCHHHHHHHHHhcCCeEEEEccccc-cccHHHHHHHHhccCCcceEEEEecCC----------CCcCHHHHhhccccc
Confidence 999999999999999999999987531 00111111111222221 22222110 112344433221100
Q ss_pred CCCC---CCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHH
Q 004952 343 PRPN---YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (722)
Q Consensus 343 ~~~~---~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (722)
.... ........++++++++|||||||.||||+++|+++...+......++++.+|++++.+|++|..+. +.++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 258 (538)
T TIGR03208 179 DTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMP 258 (538)
T ss_pred cccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHH
Confidence 0000 011123467999999999999999999999999999888877778889999999999999998876 668899
Q ss_pred hhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCC
Q 004952 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (722)
Q Consensus 419 L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~ 498 (722)
+..|+++++.+ ..++..+++.++++++|++.++|+++..+.........+++++|.+++||+++++.+.+++.+.+ ++
T Consensus 259 l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~ 336 (538)
T TIGR03208 259 LILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GA 336 (538)
T ss_pred HHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CC
Confidence 99999999876 56788999999999999999999999998765433445678999999999999999988887765 57
Q ss_pred cccccccccccccccccCCcCC-cCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccccc
Q 004952 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNA 572 (722)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~ 572 (722)
+++|.||+||++.+........ .....++|+|++++.++|+|+++++++.|+. |||++. .||++ ++
T Consensus 337 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~--Gel~v~g~~~~~gy~~------~~ 408 (538)
T TIGR03208 337 LIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET--GRLLVRGCSNFGGYLK------RP 408 (538)
T ss_pred eEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC--cEEEEecCcccccccC------Cc
Confidence 8999999999986544332211 1223578999999999999999999999986 999993 34444 33
Q ss_pred cccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCC
Q 004952 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (722)
Q Consensus 573 ~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g 652 (722)
+.++ + .+.+||+|||+|++++||+++++||.||+||++|++|+|.|||++|. +||+|.+++|++.++...|
T Consensus 409 ~~~~--~------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~g 479 (538)
T TIGR03208 409 HLNS--T------DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLY-QHPAVAQVAIVAYPDERLG 479 (538)
T ss_pred cccc--c------cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHh-cCcceeeEEEEeccCCCCC
Confidence 3332 1 13459999999999999999999999999999999999999999995 9999999999999988777
Q ss_pred ceEEEEEEEecCCCCCCHHHHHHHHHH-HHHhhcCCC-eeecCCCCCCCCchhhHHHHH
Q 004952 653 PEVLVIFVVLKKGFTSQPDKLKMIFSK-AIQSKLNPL-FKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~-~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+.+++++++.++...+.+++++++++ +++.+++|. ++++++||+|++||++|++|+
T Consensus 480 -~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 480 -ERACAVVVPKPGCTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred -ceEEEEEEECCCCCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 89999999987766778899999986 799999995 558999999999999999986
No 56
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-64 Score=572.52 Aligned_cols=485 Identities=16% Similarity=0.214 Sum_probs=373.7
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++++|+++|+++.+.. +.+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 23 ~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 23 QARQQPEAIALRRCDGT------SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred HHhhCCCcEEEeecCCC------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEec
Confidence 34789999999864431 2799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
++.++.+++.++++.++++++|+++........+. ..... ...+.+...... . . +.+....
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~-------~-~-~~~~~~~----- 157 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGSKMASSAVP---EALHS--IPVIAVDIAAVT-------R-E-SEHSLDA----- 157 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccchhcccccc---ccccc--cceeEeeccccc-------c-c-ccccccc-----
Confidence 99999999999999999999999875431111111 00000 111122110000 0 0 0000000
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhh----hhcCCCCCCEEEEecCccccchhHHHHHHh
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L 419 (722)
..........+++++|++|||||||.||||+++|+++.+...... ..++...+++++...|+.|+.+++..+.++
T Consensus 158 -~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l 236 (540)
T PRK05857 158 -ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCL 236 (540)
T ss_pred -cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHh
Confidence 000112234678999999999999999999999999876544321 224566788999999999999998888999
Q ss_pred hcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCc
Q 004952 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (722)
Q Consensus 420 ~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~ 499 (722)
+.|+++++.+ .++..++++|++++||+++++|++++.|.........+++++|.+++||++++....+++. .+ +.+
T Consensus 237 ~~G~~~v~~~--~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~-~~-g~~ 312 (540)
T PRK05857 237 MHGGLCVTGG--ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIE-AT-GVR 312 (540)
T ss_pred hcceeEEecC--CChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHH-Hh-CCe
Confidence 9999987643 4667899999999999999999999999887655556789999999999999877765543 33 689
Q ss_pred ccccccccccccccccCCcCC----cCccccccccCCCceEEEECCCCCc-C-----CCCCCccceEEEe-----cccCC
Q 004952 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVP-Y-----PDDQPCVGEVGLF-----PLYLG 564 (722)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~vld~~~~~-~-----p~G~~giGel~v~-----~~y~~ 564 (722)
+++.||+||++.......... ....+++|+|++|++++|+|++++. + |.|+ +|||++. .||++
T Consensus 313 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~--~Gel~v~g~~~~~GY~~ 390 (540)
T PRK05857 313 TAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSAS--FGTLWIKSPANMLGYWN 390 (540)
T ss_pred eecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCC--cceEEEeCcchhhhhhC
Confidence 999999999985433222111 1235789999999999999987763 3 3455 4999993 34544
Q ss_pred CccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEE
Q 004952 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (722)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv 644 (722)
+++.+++.|.. | ||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+|+|+
T Consensus 391 ------~~~~t~~~~~~-----g--~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~V~~~~v~ 456 (540)
T PRK05857 391 ------NPERTAEVLID-----G--WVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAE-GVSGVREAACY 456 (540)
T ss_pred ------CccchhhhcCC-----C--ceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHH-hCCCeeEEEEE
Confidence 55566666642 3 9999999999999999999999999999999999999999995 99999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCC-CHHHH----HHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 645 SVSPAGGGPEVLVIFVVLKKGFTS-QPDKL----KMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~-~~~~l----~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
++++...+ +.++++++..+.... ..+++ .+++++.++.|++|. ++++++||+|+|||+||++|++++.++-
T Consensus 457 ~~~~~~~~-~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~~ 533 (540)
T PRK05857 457 EIPDEEFG-ALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATADK 533 (540)
T ss_pred ecCccccc-cceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhcc
Confidence 99987776 778888887653211 12334 445556788899994 5589999999999999999999988653
No 57
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=9.7e-65 Score=582.55 Aligned_cols=487 Identities=21% Similarity=0.229 Sum_probs=374.8
Q ss_pred CCCCCceEEEEecCCC-CCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec-C
Q 004952 187 RKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-A 264 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl-~ 264 (722)
+++|+++|+++.+... ..+..+.+||+||.++++++|++|.+.+++||+|+++++|++++++++|||+++|++++|+ +
T Consensus 45 ~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 45 ANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred HhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCC
Confidence 6789999999754210 0123458999999999999999997669999999999999999999999999999999999 6
Q ss_pred CCCC--HHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC----CcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 265 DSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 265 p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
+.++ .+++.+++++++++++|+++... +.......... ..++.+.. +...
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~------------------~~~~ 180 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAA------EAVEGFLRNLPRLRRPRVIAIDA------------------IPDS 180 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHH------HHHHHHHhhcccccCceEEEecc------------------cccc
Confidence 8877 88999999999999999987532 11111111111 11222210 0000
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC-CCCCCEEEEecCccccchhHHHHH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVILFS 417 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~ 417 (722)
.. .........+++++||+|||||||.||||+++|+++.+.+......++ +.++++++++.|+.|+.++..++.
T Consensus 181 ~~-----~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~ 255 (612)
T PRK12476 181 AG-----ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGF 255 (612)
T ss_pred cc-----ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHH
Confidence 00 011112345689999999999999999999999999877766666677 788999999999999999977777
Q ss_pred HhhcCCEEEEecC-CC--ChhhHHHHHH--HhCCcEEechhHHHHHHHhcCC----CCCCCccceeEEEeecCCCCcchH
Q 004952 418 SFLNGATLALYQG-SP--LERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDDD 488 (722)
Q Consensus 418 ~L~~G~~lv~~~~-~~--~~~~l~~~i~--~~~vt~l~~~P~~l~~l~~~~~----~~~~~l~~Lr~i~~~Ge~l~~~~~ 488 (722)
+++.|+++++... .. ++..+++.++ ++++|++..+|+++..++.... ....++++|| +++||+++++++.
T Consensus 256 ~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~ 334 (612)
T PRK12476 256 PAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAV 334 (612)
T ss_pred HHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHH
Confidence 7777777777653 22 6778999995 5899999999999888766421 1344688999 9999999999998
Q ss_pred HHHHhhcc-----CCcccccccccccccccccCCcCC------------------------c--CccccccccCCCceEE
Q 004952 489 LWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQ------------------------P--QAFGAFSTATMTAGLV 537 (722)
Q Consensus 489 ~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~------------------------~--~~~~~iG~p~~~~~~~ 537 (722)
+++.+.++ ..+++|.||+||++..++...... + ...+++|+|++|++++
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ 414 (612)
T PRK12476 335 TTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAV 414 (612)
T ss_pred HHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEE
Confidence 88877652 245999999999875443321110 0 0124789999999999
Q ss_pred EECCC-CCcCCCCCCccceEEEe-----cccCCCccccccccccccceeccc------------cCCCceecccCceEEE
Q 004952 538 ILDEC-GVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMP------------MYKGMCLRRHGDIIKR 599 (722)
Q Consensus 538 vld~~-~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p------------~~~g~r~yrTGDl~~~ 599 (722)
|+|++ |+++|.|++ |||++. .||++ +++.|++.|...+ ..++.+||+|||+|++
T Consensus 415 ivd~~~g~~~~~g~~--GEl~v~g~~v~~GY~~------~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~ 486 (612)
T PRK12476 415 IVDPDTGAELPDGEV--GEIWLHGDNIGRGYWG------RPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY 486 (612)
T ss_pred EEeCCCCcCCCCCCE--EEEEEcCCcccccccC------ChHHHHHHHhhhhccccccccccccccCCCCeeecccccee
Confidence 99988 999999995 999993 45554 5667777775311 0123569999999998
Q ss_pred ecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcce--eEEEeecCCCCCceEEEEEEEecCCC-CCCHHHHHHH
Q 004952 600 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMI 676 (722)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~--~~vv~~~~~~~g~~~l~a~vv~~~~~-~~~~~~l~~~ 676 (722)
+ ||+|+|+||+||+||++|+||+|.|||++|.+.||.|.+ ++|++++++. + ++++++|++.++. ..+.++|.++
T Consensus 487 ~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~ 563 (612)
T PRK12476 487 L-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-N-ERLVIVAERAAGTSRADPAPAIDA 563 (612)
T ss_pred E-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-c-ceEEEEEEecCCcccccHHHHHHH
Confidence 4 999999999999999999999999999999535899999 6777887776 5 8899999988764 3567889999
Q ss_pred HHHHHHh-hcC-CC-eeecC--CCCCCCCchhhHHHHHHHHhh
Q 004952 677 FSKAIQS-KLN-PL-FKVVP--EFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 677 l~~~l~~-~~~-p~-~~~v~--~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+++++.. +++ |. +.+++ +||+|+||||+|++|++++.+
T Consensus 564 ~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 564 IRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred HHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 9999884 776 54 34665 699999999999999998754
No 58
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.7e-64 Score=569.70 Aligned_cols=487 Identities=19% Similarity=0.201 Sum_probs=391.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+||++|+++.+. .+||+||.++++++|..|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 31 a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~ 102 (542)
T PRK06155 31 AERYPDRPLLVFGGT--------RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPIN 102 (542)
T ss_pred HHHCCCCeEEEeCCc--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEec
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC-C-CcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
|.++.+++..+++++++++++++..... ......... . ...+.+..... .. ....|..... ...
T Consensus 103 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~-~~~- 168 (542)
T PRK06155 103 TALRGPQLEHILRNSGARLLVVEAALLA------ALEAADPGDLPLPAVWLLDAPAS---VS---VPAGWSTAPL-PPL- 168 (542)
T ss_pred cccCHHHHHHHHHhcCceEEEEChhhHH------HHHHhcccccCcceEEEecCccc---cc---cccccchhhh-ccc-
Confidence 9999999999999999999999875421 111111111 1 12222221100 00 0011111000 000
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcC
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (722)
..........++++++++|||||||.||||+++|+++.+........+++++++++++..|++|..++..++.+++.|
T Consensus 169 --~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G 246 (542)
T PRK06155 169 --DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLAG 246 (542)
T ss_pred --CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcC
Confidence 001112334678999999999999999999999999988777777788999999999999999999998889999999
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++.+..++.+.+ +++++|
T Consensus 247 ~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~ 322 (542)
T PRK06155 247 ATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLD 322 (542)
T ss_pred ceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEe
Confidence 9999876 45788999999999999999999999999887655555678899887666 4677777777665 678999
Q ss_pred cccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEeccc--CCCcccccccccccccee
Q 004952 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLY--LGASDRLLNADHEEVYFR 580 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y--~~~~~~~~~~~~t~~~f~ 580 (722)
.||+||++.++.... .....+++|.|++++.++|+|++++++|.|+. |||++.... .-...|+.+++.+...|.
T Consensus 323 ~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gei~v~~~~~~~~~~GY~~~~~~~~~~~~ 398 (542)
T PRK06155 323 GYGSTETNFVIAVTH--GSQRPGSMGRLAPGFEARVVDEHDQELPDGEP--GELLLRADEPFAFATGYFGMPEKTVEAWR 398 (542)
T ss_pred eecccccCccccCCC--CCCCCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEEecCCccccchhhcCCHHHHHHhhc
Confidence 999999987544322 23456789999999999999999999999985 999984321 011112224445555553
Q ss_pred ccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEE
Q 004952 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (722)
Q Consensus 581 ~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~v 660 (722)
..||+|||+|++++||+++|+||.||+||++|.+|+|.|||++|. +||+|.+++|++++++..+ +.+++++
T Consensus 399 -------~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~v~~~~~~-~~~~~~v 469 (542)
T PRK06155 399 -------NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLL-SHPAVAAAAVFPVPSELGE-DEVMAAV 469 (542)
T ss_pred -------CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeecccccC-ceEEEEE
Confidence 239999999999999999999999999999999999999999995 9999999999999988777 7889999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHh
Q 004952 661 VLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIK 713 (722)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~ 713 (722)
+++.+...+..+++++++++|+.+++| .+.++++||+|++||++|++|++++-
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 470 VLRDGTALEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred EECCCCCCCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 988777778899999999999999999 45589999999999999999998753
No 59
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.7e-64 Score=573.56 Aligned_cols=494 Identities=21% Similarity=0.242 Sum_probs=379.2
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+.+||++|+++.+. ++||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 25 ~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 25 ECYPNRTSIIYGKT--------RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINT 96 (579)
T ss_pred HhCCCCeEEEECCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 67999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC-------CCcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------PLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
.++.+++.++++.++++++|+++... +....+.... ....+++...... ........++.++.+.
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 168 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFE------PLAREVLHLLSSEDSNLNLPVIFIHEIDFP--KRPSSEELDYECLIQR 168 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhH------HHHHHHHhhccccccccCceEEEecccccc--cCCcccccCHHHHHhc
Confidence 99999999999999999999986532 1222222111 1123333211110 0001123456666543
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (722)
................++++++|+|||||||.||||+++|+++..........+.+...+++++..|+.|..++...+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~ 248 (579)
T PLN03102 169 GEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGT 248 (579)
T ss_pred cCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHHH
Confidence 32210000000112356899999999999999999999999975444333344556777899999999999888777888
Q ss_pred hhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCC
Q 004952 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (722)
Q Consensus 419 L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~ 498 (722)
+..|+++++.+. .++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++.. + ++
T Consensus 249 ~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~ 325 (579)
T PLN03102 249 AARGGTSVCMRH-VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GF 325 (579)
T ss_pred HHhcCcEEeecc-CChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CC
Confidence 999999998863 56778999999999999999999999998865433344567889999999999988888764 3 67
Q ss_pred cccccccccccccccccCCcCC-----c--------CccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEe-----
Q 004952 499 AIIESCGGTELSSAYIQGSLLQ-----P--------QAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF----- 559 (722)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-----~--------~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~----- 559 (722)
++++.||+||+++.++...... + ...+..+.|++ .+.|.| +.++++|.+...+|||++.
T Consensus 326 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~ 403 (579)
T PLN03102 326 QVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIM 403 (579)
T ss_pred eEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcchh
Confidence 8999999999985433221100 0 11222233444 456666 4577787531114999983
Q ss_pred cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcc
Q 004952 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (722)
Q Consensus 560 ~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (722)
.||++ +++.+++.|.. | ||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|. +||.|.
T Consensus 404 ~GY~~------~~~~t~~~f~~-----g--w~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~ 469 (579)
T PLN03102 404 KGYLK------NPKATSEAFKH-----G--WLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLY-KYPKVL 469 (579)
T ss_pred hhhcC------ChhhhHhhhcc-----C--ceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHH-hCCCcc
Confidence 45555 55566666642 3 9999999999999999999999999999999999999999995 999999
Q ss_pred eeEEEeecCCCCCceEEEEEEEecCCCCC----------CHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHH
Q 004952 640 ETAAISVSPAGGGPEVLVIFVVLKKGFTS----------QPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVL 708 (722)
Q Consensus 640 ~~~vv~~~~~~~g~~~l~a~vv~~~~~~~----------~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L 708 (722)
+++|++++++..+ +.++++|++.++... +..+++++++++||.|++| .++++++||+|++||++|++|
T Consensus 470 ~a~vv~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L 548 (579)
T PLN03102 470 ETAVVAMPHPTWG-ETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKL 548 (579)
T ss_pred eeEEEeccCcccc-ceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHH
Confidence 9999999998877 899999998865432 3468999999999999999 455899999999999999999
Q ss_pred HHHHhhhh
Q 004952 709 RDQIKHEL 716 (722)
Q Consensus 709 ~~~~~~~~ 716 (722)
++++.+..
T Consensus 549 ~~~~~~~~ 556 (579)
T PLN03102 549 RDIAKGLV 556 (579)
T ss_pred HHHHHHhh
Confidence 99876643
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-65 Score=607.34 Aligned_cols=482 Identities=15% Similarity=0.120 Sum_probs=370.1
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++++||++|+++.++ ++||+||+++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 456 ~a~~~pd~~Al~~~~~--------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl 527 (994)
T PRK07868 456 QARDAPKGEFLLFDGR--------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLM 527 (994)
T ss_pred HHHHCCCCeEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 4578999999998776 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCC--CCCCCHHHHhcccCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLR--EQDLSWKDFLSSVDY 341 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 341 (722)
+|. .++.++++++++++||++.... ..+. .....++++..... ...... ....++++.......
T Consensus 528 ~p~---~~l~~il~~s~~~~li~~~~~~---------~~~~-~~~~~iiv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 593 (994)
T PRK07868 528 PPD---TDLAAAVRLGGVTEIITDPTNL---------EAAR-QLPGRVLVLGGGES-RDLDLPDDADVIDMEKIDPDAVE 593 (994)
T ss_pred CCc---hhHHHHHhccCCeEEEEChHHH---------HHHH-hcCceEEEecCCcc-ccccCCcchhhhhhhhcCccccc
Confidence 985 6899999999999999986432 1111 12233344321110 000000 001111111110000
Q ss_pred CCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhc
Q 004952 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (722)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~ 421 (722)
.+.........+++++||+|| ||||.||++.++|.+...........++++++|++++.+|++|+++++..+.+++.
T Consensus 594 --~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~ 670 (994)
T PRK07868 594 --LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVV 670 (994)
T ss_pred --CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhc
Confidence 000011112236899999999 57888888888887755444444456788999999999999999999776666666
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
|++.+++....++..+++.|++++||+++++|++++.|++.......++++||.++. +.+++++.+++.+.++.++++
T Consensus 671 gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~ 748 (994)
T PRK07868 671 GGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIG--SGMPTGLWERVVEAFAPAHVV 748 (994)
T ss_pred cceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEec--CCCCHHHHHHHHHHhCchhee
Confidence 666555554678899999999999999999999999998865444456789998763 348999999998888778999
Q ss_pred ccccccccccccccCCcCCcCccccccccCCCc-eEEE-----------ECCCC--CcCCCCCCccceEEEe-cccCCCc
Q 004952 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVI-----------LDECG--VPYPDDQPCVGEVGLF-PLYLGAS 566 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~v-----------ld~~~--~~~p~G~~giGel~v~-~~y~~~~ 566 (722)
|.||+||+++... .. .....+++|+|++|+ +++| +|++| ++++.|++ |||++. ++|++
T Consensus 749 ~~YG~TE~~~~~~-~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~--Gel~~~~~~~~~-- 821 (994)
T PRK07868 749 EFFATTDGQAVLA-NV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEV--GVLLARARGPID-- 821 (994)
T ss_pred eeeeccccccccc-cc--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCc--eEEEEecCCCCC--
Confidence 9999999875432 11 223557899999997 5554 35666 67888985 999984 44442
Q ss_pred cccccccc--cccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEE
Q 004952 567 DRLLNADH--EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (722)
Q Consensus 567 ~~~~~~~~--t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv 644 (722)
++. +..+|. ++++||+|||+|++|+||+|+|+||+|||||++|.+|+|.|||++|. +||+|.+|+|+
T Consensus 822 -----p~~t~~~~~~~-----~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~-~hp~V~~aaVv 890 (994)
T PRK07868 822 -----PTASVKRGVFA-----PADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALG-RIGGVDLAVTY 890 (994)
T ss_pred -----hhhhhHhcccc-----cCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHh-cCCCeeEEEEE
Confidence 222 222342 25679999999999999999999999999999999999999999995 99999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 645 SVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+++++. + +.++|||+++++...+.++|+++|++ +|.||+|. ++++++||+|+|||++|++|++....
T Consensus 891 g~~d~~-~-~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~lp 958 (994)
T PRK07868 891 GVEVGG-R-QLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGIP 958 (994)
T ss_pred eecCCC-C-ceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCCC
Confidence 998875 4 78999999988777788999999986 99999995 55999999999999999999876443
No 61
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.3e-65 Score=587.38 Aligned_cols=501 Identities=16% Similarity=0.141 Sum_probs=367.8
Q ss_pred CCCCCCceEEEEecC-CCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++||++|+.+.+. .+..+.+..+||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|+++||+
T Consensus 55 a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl 134 (666)
T PLN02614 55 VEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPL 134 (666)
T ss_pred HHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEe
Confidence 468999999986421 01112344689999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC------CcEEEEcCCCCCCC---CCCCCCCCCHHH
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP------LKAIVLPAIGNDVG---IPLREQDLSWKD 334 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~~ 334 (722)
+|.++.+++.+++++++++++|+++... ..+....+ ..++.+........ ........++++
T Consensus 135 ~~~~~~~~l~~il~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (666)
T PLN02614 135 YDTLGAGAVEFIISHSEVSIVFVEEKKI---------SELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDE 205 (666)
T ss_pred cCCCCHHHHHHHHhccCCCEEEECHHHH---------HHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHH
Confidence 9999999999999999999999986421 12211111 11222211000000 000011245666
Q ss_pred HhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhc-----CCCCCCEEEEecCcccc
Q 004952 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKVGDVYCWPTNLGWV 409 (722)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~~ 409 (722)
++...... ..+.....++|+|+|+|||||||.||||++||+|+++.+.+....+ +++++|++++++|++|.
T Consensus 206 ~~~~~~~~----~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 206 FLKLGEGK----QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred HHhhcccC----CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 65433210 1111234579999999999999999999999999988776554433 57889999999999998
Q ss_pred chhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC------------------------
Q 004952 410 MGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL------------------------ 465 (722)
Q Consensus 410 ~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~------------------------ 465 (722)
++....+.+++.|+++++.+ .++..+++.|+++++|+++++|++++.|......
T Consensus 282 ~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 88755667788999999875 3678999999999999999999999987642100
Q ss_pred -------CCC-------------Cc-cceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCcc
Q 004952 466 -------EGL-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 524 (722)
Q Consensus 466 -------~~~-------------~l-~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 524 (722)
... .+ ++||.+++||+++++.+ ..+...+++++++|.||+||+++..+..........
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 438 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDML 438 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcC
Confidence 000 01 68999999999999865 455555656899999999999754433322222346
Q ss_pred ccccccCCCceEEEEC-CC--CCcCCCCCCccceEEE-ecccCCCccccccccccccceeccccCCCceecccCceEEEe
Q 004952 525 GAFSTATMTAGLVILD-EC--GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT 600 (722)
Q Consensus 525 ~~iG~p~~~~~~~vld-~~--~~~~p~G~~giGel~v-~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~ 600 (722)
+++|+|+||++++|+| ++ ++++|.|+. |||+| +++.+. .|+.+++.|++.|. + | ||+|||+|++|
T Consensus 439 gsvG~p~pg~evki~d~~~~~~~~~~~g~~--GEl~vrGp~v~~--GY~~~pe~T~~~f~-d----G--w~~TGDlg~~d 507 (666)
T PLN02614 439 GTVGPPVPNVDIRLESVPEMEYDALASTPR--GEICIRGKTLFS--GYYKREDLTKEVLI-D----G--WLHTGDVGEWQ 507 (666)
T ss_pred CcccCcCCceEEEEeeecccCcccCCCCCC--ceEEEcCCcccc--cccCCHHHhhhhhc-c----C--CcccceEEEEc
Confidence 7999999999999998 33 478999985 99999 332222 12336778888884 1 3 99999999999
Q ss_pred cCCcEEEEeecCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC----------CCC
Q 004952 601 VGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF----------TSQ 669 (722)
Q Consensus 601 ~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~----------~~~ 669 (722)
+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+|+|++.... ..++|+|++.... ..+
T Consensus 508 ~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~~~V~g~~~~----~~l~alvv~~~~~~~~~~~~~~~~~~ 582 (666)
T PLN02614 508 PNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG-EVQAVDSVWVYGNSFE----SFLVAIANPNQQILERWAAENGVSGD 582 (666)
T ss_pred CCCCEEEEEcchhceecCCCeeecHHHHHHHHh-cCCCeeEEEEEecCCc----ceEEEEEeCCHHHHHHHHHhcCCCcC
Confidence 99999999999999997 699999999999995 9999999999996532 5799999986421 001
Q ss_pred ------HHHHHHHHHH---------HHHhhcCCC-eeecC-CC-----CCCCCchhhHHHHHHHHhhhhhh
Q 004952 670 ------PDKLKMIFSK---------AIQSKLNPL-FKVVP-EF-----PRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 670 ------~~~l~~~l~~---------~l~~~~~p~-~~~v~-~l-----P~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
..++++.+.+ .|+.+-.++ +..++ .| -+||++|+.|+.+.+.|+.++++
T Consensus 583 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ 653 (666)
T PLN02614 583 YNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDE 653 (666)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHH
Confidence 1223333322 245554453 22222 33 38999999999999999888765
No 62
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-64 Score=564.66 Aligned_cols=464 Identities=23% Similarity=0.266 Sum_probs=388.0
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++.++||++|+++.++ .+||+||+++++++|++|.+. +++||+|++++++++++++++|||+++|++++|+
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i 82 (483)
T PRK03640 11 RAFLTPDRTAIEFEEK--------KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLL 82 (483)
T ss_pred HHHhCCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEec
Confidence 3468999999998776 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
++.++.+++.+++++++++++++++..... .... ....++++......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~---------~~~~---------------------~~~~~~~~~~~~~~-- 130 (483)
T PRK03640 83 NTRLSREELLWQLDDAEVKCLITDDDFEAK---------LIPG---------------------ISVKFAELMNGPKE-- 130 (483)
T ss_pred CcCCCHHHHHHHHHhCCCCEEEEcchhhHH---------Hhhh---------------------ccccHHHHhhcccc--
Confidence 999999999999999999999998643210 0000 00113333322111
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (722)
.........++++++++|||||||.||||+++|+++...+......++++++|++++..|+.|..++..++.++..|+
T Consensus 131 --~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~ 208 (483)
T PRK03640 131 --EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGM 208 (483)
T ss_pred --cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCC
Confidence 111223346789999999999999999999999998887777777789999999999999999999887899999999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++++.+ ..++..+++.|+++++|++.++|+++..|.+..... ....+||.+++||+++++...+++... ++++++.
T Consensus 209 ~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 284 (483)
T PRK03640 209 RVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQS 284 (483)
T ss_pred EEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeee
Confidence 999987 467889999999999999999999999998654322 234699999999999999998887764 6899999
Q ss_pred ccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccccc
Q 004952 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~ 577 (722)
||+||++..+...... .....+++|+|+++++++|.|+. +++|.|+. |||++. .||++ +++.++.
T Consensus 285 YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~--Gel~v~g~~~~~gy~~------~~~~~~~ 355 (483)
T PRK03640 285 YGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEE--GEIVVKGPNVTKGYLN------REDATRE 355 (483)
T ss_pred eccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCc--eEEEEECcchhhhhcC------CHHHHHH
Confidence 9999987543333322 33456789999999999999864 89999996 999993 45554 4445555
Q ss_pred ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 578 ~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
.|.. .||+|||++++++||+++++||+||++|++|.+|++.|||+.+. .+|+|.+++|++.+++..+ ..++
T Consensus 356 ~~~~-------~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~-~~~~v~~~~v~~~~~~~~~-~~~~ 426 (483)
T PRK03640 356 TFQD-------GWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLL-SHPGVAEAGVVGVPDDKWG-QVPV 426 (483)
T ss_pred HHhc-------CCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeCCCcccC-CceE
Confidence 5532 28999999999999999999999999999999999999999995 9999999999999887776 7888
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+|+++.+ ..+.++++++++++|+.+++|. ++.+++||+|++||++|++|++++.+
T Consensus 427 ~~~~~~~--~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 427 AFVVKSG--EVTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEEEeCC--CCCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 8888654 5677899999999999999994 55899999999999999999998864
No 63
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=7.9e-64 Score=563.55 Aligned_cols=480 Identities=21% Similarity=0.224 Sum_probs=395.7
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 004952 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (722)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~ 266 (722)
.+|+++|+.+.+. +.+||+||.++++++|++|++. +++||+|++++++++++++++|||+++|++++|+++.
T Consensus 14 ~~~~~~a~~~~~~-------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~ 86 (504)
T PRK07514 14 ADRDAPFIETPDG-------LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTA 86 (504)
T ss_pred hCCCCeEEEeCCC-------CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCC
Confidence 7899999987444 2899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc-EEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
++.+++..++++++++++++++... +....+....... .+.+... ....+.+......
T Consensus 87 ~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----- 145 (504)
T PRK07514 87 YTLAELDYFIGDAEPALVVCDPANF------AWLSKIAAAAGAPHVETLDAD----------GTGSLLEAAAAAP----- 145 (504)
T ss_pred CCHHHHHHHHHhCCCcEEEEccchh------HHHHHhhhccCCceEEEecCC----------CcccHHHhhhhcC-----
Confidence 9999999999999999999987432 1122222222111 2222110 1111222221111
Q ss_pred CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCE
Q 004952 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (722)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (722)
.........+++++|++|||||||.||||+++|+++...+......+++.++|++++..|+.|..++ +.++.+++.|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 1122234567999999999999999999999999999988877778889999999999999998887 567889999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
+++.+ ..++..+++.+ .++|++..+|+++..++.........++++|.+++||+++++++.+++.+.+ +.++++.|
T Consensus 226 ~~~~~-~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~Y 301 (504)
T PRK07514 226 MIFLP-KFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERY 301 (504)
T ss_pred EEECC-CCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeec
Confidence 99986 45778888888 4799999999999999877655566788999999999999999988888765 56899999
Q ss_pred cccccccccccCCcCCcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEE-----ecccCCCccccccccccccc
Q 004952 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (722)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~ 578 (722)
|+||++..... .........++|.|++++.++|+| ++++++|.|+. |||++ ..||++ +++.+++.
T Consensus 302 G~tE~~~~~~~-~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~--Gel~i~~~~~~~gy~~------~~~~~~~~ 372 (504)
T PRK07514 302 GMTETNMNTSN-PYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEI--GMIEVKGPNVFKGYWR------MPEKTAEE 372 (504)
T ss_pred ccccccccccC-CccccccCcccccCCCCcEEEEEECCCCCCCCCCCc--eEEEEecCCccccccC------Cchhhhhh
Confidence 99998764332 222233457899999999999999 88999999985 99998 345554 55566677
Q ss_pred eeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEE
Q 004952 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (722)
Q Consensus 579 f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a 658 (722)
|..+ .||+|||+|+++++|.++++||+||+||++|++|+|.|||++|. .+|+|.+++|++++++..+ +.+++
T Consensus 373 ~~~~------~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~ 444 (504)
T PRK07514 373 FRAD------GFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEID-ELPGVVESAVIGVPHPDFG-EGVTA 444 (504)
T ss_pred cccC------CCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEeCCCCCcC-ceEEE
Confidence 7643 29999999999999999999999999999999999999999995 8999999999999887777 78999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 659 FVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 659 ~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
+++..++...+.++++++++++|+.+++|. ++.+++||+|++||++|++|++++.+..
T Consensus 445 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 445 VVVPKPGAALDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred EEEECCCCCCCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhhc
Confidence 999987666678899999999999999995 5589999999999999999999887653
No 64
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.2e-64 Score=591.27 Aligned_cols=486 Identities=19% Similarity=0.219 Sum_probs=375.6
Q ss_pred CCCCCC-ceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd-~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+ ++|+.+.+. +.+||+||.++++++|++|++.+++||+|+|+++|++++++++|||+++|++++|++
T Consensus 214 ~~~~p~~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 286 (718)
T PRK08043 214 QYRYGAGKPCIEDVNF-------TPDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATISAAVIFGASLRRRIPAMMN 286 (718)
T ss_pred HHHhCCCCcceEcCCC-------CcccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccc
Confidence 468897 688875332 289999999999999999977689999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCCCCCCCCCCHHHH--h-cccC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDF--L-SSVD 340 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 340 (722)
+.++.+++.+++++++++++|++++.....+... +....+. ..+++.... ....+.+. . ....
T Consensus 287 ~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~ 353 (718)
T PRK08043 287 YTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH----LPEQLTQVRWVYLEDLK---------DDVTTADKLWIFAHLL 353 (718)
T ss_pred cCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC----hhhhhccccEEEhhhhh---------hhcchhHHHHHHHHHh
Confidence 9999999999999999999999876432111100 0011111 112211100 00011110 0 0000
Q ss_pred CCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHh
Q 004952 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (722)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (722)
. + ........++|++|++|||||||.||||+++|+++.+.+.+....++++++|++++..|++|.++. ..++.+|
T Consensus 354 ~---~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l 429 (718)
T PRK08043 354 M---P-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPL 429 (718)
T ss_pred C---C-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHH
Confidence 0 0 011123467999999999999999999999999999888877777889999999999999999887 5588999
Q ss_pred hcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCc
Q 004952 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (722)
Q Consensus 420 ~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~ 499 (722)
..|+++++.+...+...+.+.++++++|++..+|+++..+.+.. ...++++||.+++||+++++++.+++.+.+ +++
T Consensus 430 ~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~ 506 (718)
T PRK08043 430 LTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLR 506 (718)
T ss_pred HcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCC
Confidence 99999999875455667889999999999999999998886642 335678999999999999999988887765 689
Q ss_pred ccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCccccccccc
Q 004952 500 IIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (722)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~ 574 (722)
++|.||+||++.+++.... .....+++|+|++|++++|+|+++. |+ .|||++ ..||++.. +++.
T Consensus 507 l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~~----~~--~Gel~v~g~~v~~GY~~~e----~~~~ 575 (718)
T PRK08043 507 ILEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPGI----EQ--GGRLQLKGPNIMNGYLRVE----KPGV 575 (718)
T ss_pred eecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCCC----CC--ceEEEEecCCccccccCCC----Cccc
Confidence 9999999999865543322 2235689999999999999997653 34 389987 34555421 1221
Q ss_pred ccccee-ccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCc
Q 004952 575 EEVYFR-GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (722)
Q Consensus 575 t~~~f~-~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~ 653 (722)
+...+. ........+||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||.+.+++|++.+++..|
T Consensus 576 ~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~-~~~~~~~~avv~~~~~~~g- 653 (718)
T PRK08043 576 LEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLAL-GVSPDKQHATAIKSDASKG- 653 (718)
T ss_pred ccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHH-hCCccceEEEEEccCCCCC-
Confidence 111111 0000112349999999999999999999999999999999999999999995 8888889999999888777
Q ss_pred eEEEEEEEecCCCCCCHHHHHHHHHHH-HHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 654 EVLVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~-l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+.++++++ +...+.++++++++++ |+.|++|. ++++++||+|++|||||++|++++.+
T Consensus 654 e~~v~~~~---~~~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 654 EALVLFTT---DSELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred ceEEEEEc---CcccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 88888875 2346678999999998 99999994 55999999999999999999988765
No 65
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.2e-64 Score=567.78 Aligned_cols=493 Identities=21% Similarity=0.203 Sum_probs=407.0
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||+||.++++++|..|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 92 (523)
T PRK08316 21 ARRYPDKTALVFGDR--------SWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVN 92 (523)
T ss_pred HHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 368899999998876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
+.++.+++.++++.+++++++++.... +......+......+.+..... ..........+.++......
T Consensus 93 ~~~~~~~i~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 161 (523)
T PRK08316 93 FMLTGEELAYILDHSGARAFLVDPALA------PTAEAALALLPVDTLILSLVLG--GREAPGGWLDFADWAEAGSV--- 161 (523)
T ss_pred cccCHHHHHHHHHhCCCCEEEEccchH------HHHHHHhhhcCccceeeeeccc--ccccccchhhHHHHHhcCCC---
Confidence 999999999999999999999987432 1122221111111111111000 01111233445554433221
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhH-HHHHHhhcCC
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGA 423 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~ 423 (722)
........++++++++|||||||.||+|.++|++++.........+++.++++++...|+.|..+.. .++.++..|+
T Consensus 162 --~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~ 239 (523)
T PRK08316 162 --AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGA 239 (523)
T ss_pred --ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCc
Confidence 1122345678999999999999999999999999998888777788999999999999999988874 3556788999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++++.+ ..++..+++.|+++++|++.++|+++..|.+.......++++||.+++||+.++.+....+.+.++++++++.
T Consensus 240 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 318 (523)
T PRK08316 240 TNVILD-APDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNC 318 (523)
T ss_pred eEEEec-CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeee
Confidence 999986 4578899999999999999999999999998766566678999999999999999999999888878899999
Q ss_pred ccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccccc
Q 004952 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~ 577 (722)
||+||++.+....... .....+++|+|+++++++|+|++|++++.|+. ||+++. .+|++ +++.++.
T Consensus 319 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gei~v~~~~~~~~y~~------~~~~~~~ 390 (523)
T PRK08316 319 YGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEV--GEIVHRSPQLMLGYWD------DPEKTAE 390 (523)
T ss_pred ecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCc--ceEEEECCchhhhhcC------CHHHHHH
Confidence 9999998755443322 22345789999999999999999999999985 999993 34443 4455665
Q ss_pred ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 578 ~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
.|. .+||+|||+|++++||.++++||.||+||++|.+|+|.+||+.|. ++|+|.+++|++.+++..+ +.++
T Consensus 391 ~~~-------~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 461 (523)
T PRK08316 391 AFR-------GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALY-THPAVAEVAVIGLPDPKWI-EAVT 461 (523)
T ss_pred Hhh-------CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHH-hCCChheEeEecccCcccC-CeEE
Confidence 553 239999999999999999999999999999999999999999994 9999999999999988777 8999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhh
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELS 717 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 717 (722)
++++++++...+.++++++++++|+.++.|. ++.++++|+|++||++|++|++++.+..+
T Consensus 462 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 462 AVVVPKAGATVTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred EEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 9999987666677899999999999999994 55899999999999999999999987643
No 66
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=5.7e-64 Score=567.22 Aligned_cols=483 Identities=19% Similarity=0.219 Sum_probs=390.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|+++.+. ++||+||.++++++|..|.+. +++||+|+++++|++++++++|||+++|+++++++
T Consensus 33 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 104 (527)
T TIGR02275 33 AARYPDAIAIICGNR--------QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLAL 104 (527)
T ss_pred HHHCCCceEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccc
Confidence 368999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
+.++.+++.++++.++++++++++.... ....+....+....+. ..+.+... .. ........+.....
T Consensus 105 ~~~~~~~~~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~-- 173 (527)
T TIGR02275 105 FSHRKSELTAYAQQIEPALYIIDRAHSL-FDYDAFARQLQSKLPTLRNIIVAGQ-TR-------VEAELFLWLESPAE-- 173 (527)
T ss_pred cccCHHHHHHHHHhcCCcEEEEcCcccc-cchHHHHHHHHhhCCcceEEEEecC-CC-------CcchhhHHhhCcCc--
Confidence 9999999999999999999999864210 0000011111111221 11122110 00 00011111111111
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhH--HHHHHhhc
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~ 421 (722)
..+.....++++++++|||||||.||||+++|+++...+......+.++++|+++...|++|.+++. .++.++..
T Consensus 174 ---~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 174 ---PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred ---cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 1122345678999999999999999999999999998888777788899999999999999988874 47889999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
|+++++.+ ..++..+++.++++++|++.++|++++.|.+.......+++++|.+++||+++++++.+++.+.+ +++++
T Consensus 251 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~ 328 (527)
T TIGR02275 251 GGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQ 328 (527)
T ss_pred CCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEE
Confidence 99998865 46788899999999999999999999999877655566788999999999999999999887765 57899
Q ss_pred ccccccccccccccCCcCCcCccccccccC-CCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccc
Q 004952 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHE 575 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t 575 (722)
+.||+||+++++...........+++|+|+ ++..+.|+|++|+++|.|+. |||++. .||++ +++.+
T Consensus 329 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~--Gei~v~g~~~~~gY~~------~~~~~ 400 (527)
T TIGR02275 329 QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGET--GMLLTRGPYTFRGYYK------APEHN 400 (527)
T ss_pred eeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCc--eEEEecCCccchhhcC------ChhHh
Confidence 999999976543322212223346889999 48999999999999999985 999983 45554 45566
Q ss_pred ccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceE
Q 004952 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (722)
Q Consensus 576 ~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~ 655 (722)
...|..+ +||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.++...+ +.
T Consensus 401 ~~~~~~d------g~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~ 472 (527)
T TIGR02275 401 AAAFDAE------GFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLL-AHPAVHDAALVSMPDELLG-EK 472 (527)
T ss_pred HhhcCcC------CCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHH-hCCCceEEEEEecCCcccc-cE
Confidence 6666533 39999999999999999999999999999999999999999995 9999999999999998877 89
Q ss_pred EEEEEEecCCCCCCHHHHHHHHHHH-HHhhcCC-CeeecCCCCCCCCchhhHHHHH
Q 004952 656 LVIFVVLKKGFTSQPDKLKMIFSKA-IQSKLNP-LFKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~-l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+++||+++++ ..+..+|+++++++ ++.++.| .+.++++||+|++||++|++|+
T Consensus 473 ~~a~vv~~~~-~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 473 SCAFIVVRDP-ALKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EEEEEEECCC-CCCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 9999998765 46778999999985 9999999 4558999999999999999874
No 67
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-63 Score=559.50 Aligned_cols=470 Identities=21% Similarity=0.250 Sum_probs=384.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+||++|+.+...+ ..+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 5 a~~~p~~~a~~~~~~~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 5 ARLQPQRLAAVDLALG------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLN 78 (488)
T ss_pred hhhCCCceEEEecCCC------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeC
Confidence 4688999999863211 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
+.++.+++.+++++++++++++++...... .....++++......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~--- 123 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDDAVAAGR--------------------------------TDVEDLAAFIASADA--- 123 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcchhhccc--------------------------------ccccchhhhhhhccc---
Confidence 999999999999999999999986432100 001112222211111
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhH-HHHHHhhcCC
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGA 423 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~ 423 (722)
..........++++++++|||||||.||+|.++|+++...+........+.++|++++..|+.|.+++. .++.++..|+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 124 LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 000111234568899999999999999999999999988777666667788999999999999999984 4667888999
Q ss_pred EEEEecCCCChhhHHHHHH--HhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 424 TLALYQGSPLERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~--~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
++++.+ ..++..++..+. ++++|++.++|++++.+.+........+++||.+++||++++......+... +++++
T Consensus 204 ~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~ 280 (488)
T PRK09088 204 SILVSN-GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMV 280 (488)
T ss_pred EEEEcC-CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCcee
Confidence 998876 456677777775 4899999999999999987654445567899999999999998877766643 67899
Q ss_pred ccccccccccccccCCc--CCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccccccc
Q 004952 502 ESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADH 574 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~ 574 (722)
+.||+||++..+..... ......+++|+|+++++++|+|++++++|.|++ |||++. .||++ +++.
T Consensus 281 ~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gY~~------~~~~ 352 (488)
T PRK09088 281 DGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVP--GELLLRGPNLSPGYWR------RPQA 352 (488)
T ss_pred eeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCc--eEEEEECCccchhhcC------Chhh
Confidence 99999999864432211 112345789999999999999999999999985 999993 34554 4445
Q ss_pred cccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCce
Q 004952 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (722)
Q Consensus 575 t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~ 654 (722)
+++.|.. ++||+|||+|++++||.++++||.||+||++|.+|+|.|||++|. .||+|.+++|++++++..| +
T Consensus 353 ~~~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~ 424 (488)
T PRK09088 353 TARAFTG------DGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLA-DHPGIRECAVVGMADAQWG-E 424 (488)
T ss_pred hhhhhcC------CCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHH-hCCCcceEEEEeCCCccCC-c
Confidence 5555542 249999999999999999999999999999999999999999995 9999999999999987767 7
Q ss_pred EEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
..+++|+++++...+.++++++++++++.|+.|. +.++++||+|++||++|++|++++.+.
T Consensus 425 ~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 425 VGYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred eeEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 8899999887655677899999999999999995 558999999999999999999988764
No 68
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.5e-63 Score=564.59 Aligned_cols=484 Identities=18% Similarity=0.219 Sum_probs=394.1
Q ss_pred CCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCC
Q 004952 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (722)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~ 268 (722)
||++|+++.+. .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++++++..+
T Consensus 37 p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~ 108 (536)
T PRK10946 37 SDAIAVICGER--------QFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQ 108 (536)
T ss_pred CCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCcccc
Confidence 99999998776 899999999999999999999 999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc-EEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCC
Q 004952 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (722)
Q Consensus 269 ~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (722)
..++..++++++++++++++.... ...-.....+....+.. .+.+... .....+.+++..... .
T Consensus 109 ~~~~~~~~~~~~~~~li~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~ 173 (536)
T PRK10946 109 RSELNAYASQIEPALLIADRQHAL-FSDDDFLNTLVAEHSSLRVVLLLND---------DGEHSLDDAINHPAE-----D 173 (536)
T ss_pred HHHHHHHHhhcCCCEEEEeccccc-cchHHHHHHHHhhCCCceEEEEecC---------CCCccHHHHhhCccc-----c
Confidence 889999999999999999864210 00001112222222222 2222111 122334444433221 1
Q ss_pred CCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhH--HHHHHhhcCCEE
Q 004952 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLNGATL 425 (722)
Q Consensus 348 ~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~L~~G~~l 425 (722)
.+.....++++++++|||||||.||||+++|+++...+......++++++|++++..|++|.+++. .++.+|..|+++
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~ 253 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTV 253 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEE
Confidence 122344678999999999999999999999999999888877888999999999999999887763 578899999999
Q ss_pred EEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhc--CCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~--~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++.+ ..++..++++++++++|++.++|++++.|+.. .......+++||.+++||+++++.+.+++.+.+ ++++++.
T Consensus 254 ~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~ 331 (536)
T PRK10946 254 VLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQV 331 (536)
T ss_pred EECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEe
Confidence 9875 45777889999999999999999999999875 222334578999999999999999988887665 6899999
Q ss_pred ccccccccccccCCcCCcCccccccccC-CCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccccc
Q 004952 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~ 577 (722)
||+||+++++............++|+|+ +++.++|+|+++++++.|+. |||++. .||++ +++.|++
T Consensus 332 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~GY~~------~~~~t~~ 403 (536)
T PRK10946 332 FGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEV--GRLMTRGPYTFRGYYK------SPQHNAS 403 (536)
T ss_pred ecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCc--cEEEEecCccchhhcC------Ccccchh
Confidence 9999976544322222223457899999 79999999999999999995 999983 45554 5567777
Q ss_pred ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 578 ~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
.|..+. ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.+++..| +.++
T Consensus 404 ~~~~d~------~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~ 475 (536)
T PRK10946 404 AFDANG------FYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLL-RHPAVIHAALVSMEDELMG-EKSC 475 (536)
T ss_pred hcccCC------ceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHH-hCCCcceEEEEcCCCcccC-ceEE
Confidence 776433 9999999999999999999999999999999999999999995 9999999999999988777 8899
Q ss_pred EEEEecCCCCCCHHHHHHHHHHH-HHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhhh
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKA-IQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHEL 716 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~-l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~~ 716 (722)
++++++++ .+.+++++++++. ++.|+.| .+.+++++|+|++||++|++|++++++..
T Consensus 476 a~vv~~~~--~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 476 AFLVVKEP--LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred EEEEeCCC--CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 99998764 6678999999986 9999999 56689999999999999999999887654
No 69
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-63 Score=566.28 Aligned_cols=499 Identities=21% Similarity=0.224 Sum_probs=404.7
Q ss_pred ccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHH
Q 004952 172 VLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIY 250 (722)
Q Consensus 172 ~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~ 250 (722)
..|..+.+.. .++.+|+++|+.+.+. .+||.||.++++++|++|.+. +++||+|++++++++++++++
T Consensus 16 ~~n~~~~~~~---~a~~~~~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 16 RQNWVNQLAR---HALMQPDAPALRFLGN--------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccCHHHHHHH---HHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 3455544322 2357899999998877 999999999999999999999 999999999999999999999
Q ss_pred HHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCC
Q 004952 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQ 328 (722)
Q Consensus 251 lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 328 (722)
+||+++|++++|+++.++.+++..+++++++++++++.... +.........+. ..+++.. . ...+
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 151 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPLLSTVVVAGG-S------SDDS 151 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH------HHHHHhhhccCccceEEEecC-C------Cccc
Confidence 99999999999999999999999999999999999987432 111111111121 1222211 0 0112
Q ss_pred CCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCC-CCCCEEEEecCcc
Q 004952 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL-KVGDVYCWPTNLG 407 (722)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~-~~~d~~l~~~~~~ 407 (722)
..++++++..... ..+......+++++++|||||||.||||+++|+++...+......+++ ..+++++...|+.
T Consensus 152 ~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (542)
T PRK07786 152 VLGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLF 226 (542)
T ss_pred ccCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchH
Confidence 3456666543322 112234456889999999999999999999999998888776666776 6788999999999
Q ss_pred ccchhHHHHHHhhcCCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcc
Q 004952 408 WVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (722)
Q Consensus 408 ~~~~~~~~~~~L~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~ 486 (722)
|.+++..++.++..|+++++.+. ..++..+++.|+++++|+++++|+++..|+......... .+||.+++||++++++
T Consensus 227 ~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~ 305 (542)
T PRK07786 227 HIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDT 305 (542)
T ss_pred HHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHH
Confidence 99898889999999999999752 457889999999999999999999999998765433333 3799999999999999
Q ss_pred hHHHHHhhccCCcccccccccccccccccCCcC-CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ec
Q 004952 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FP 560 (722)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~ 560 (722)
..+++.+.+++.++++.||+||++.+.+..... ......++|+|++++.++|+|++++++|.|+. |||++ ..
T Consensus 306 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~ 383 (542)
T PRK07786 306 LLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEV--GEIVYRAPTLMS 383 (542)
T ss_pred HHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCc--eEEEEEChhhhh
Confidence 999999888889999999999998654332221 12344689999999999999999999999985 99998 34
Q ss_pred ccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcce
Q 004952 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE 640 (722)
Q Consensus 561 ~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~ 640 (722)
||++ +++.++..|.. .||+|||++++++||.++++||.||+||++|.+|++.|||++|. .||+|.+
T Consensus 384 gy~~------~~~~~~~~f~~-------~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~ 449 (542)
T PRK07786 384 GYWN------NPEATAEAFAG-------GWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLA-SHPDIVE 449 (542)
T ss_pred hhcC------CHHHHHHHhhC-------CcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hCCCccE
Confidence 5554 44556656631 29999999999999999999999999999999999999999995 9999999
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhh
Q 004952 641 TAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELS 717 (722)
Q Consensus 641 ~~vv~~~~~~~g~~~l~a~vv~~~~~-~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 717 (722)
++|++.+++..+ +.+++++++.++. ....++++++++++++.|+.|. ++++++||+|++||++|++|++++....-
T Consensus 450 ~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~ 527 (542)
T PRK07786 450 VAVIGRADEKWG-EVPVAVAAVRNDDAALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVN 527 (542)
T ss_pred EEEEeccCcccC-ceEEEEEEECCCCCCCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhc
Confidence 999999887777 8889999887643 3566899999999999999995 55899999999999999999999877643
No 70
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.7e-63 Score=566.11 Aligned_cols=495 Identities=22% Similarity=0.269 Sum_probs=398.1
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++||++|+++.++ +++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 34 ~~~pd~~a~~~~~~-------~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 34 RAMPDKIAVVDNHG-------ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred HHCCCceEEEcCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccch
Confidence 67999999997653 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
.++.+++.+++++++++++++++.... ....+.........+. ..+.+..... ......+.+++.....
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 177 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAPTLFKQ-TRPVDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQIIADYEP-- 177 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEeccccc-ccHHHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHHHhccCCc--
Confidence 999999999999999999999864311 1111112222222222 2222221110 1122345555443221
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G 422 (722)
........++++++|+|||||||.||||+++|++++.........+++.+++++++..|++|.+++ ..++.+++.|
T Consensus 178 ---~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g 254 (547)
T PRK06087 178 ---LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIG 254 (547)
T ss_pred ---ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcC
Confidence 111223467899999999999999999999999998877777777889999999999999999987 4678889999
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++++.+ ..++..+++.|+++++|++..+|+.+..++........++++||.+++||+++++++.+.+... ++++++
T Consensus 255 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 255 ARSVLLD-IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CEEEecC-CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 9999986 4678899999999999999988777777766544455678899999999999999988877654 789999
Q ss_pred cccccccccccccCCcCC-cCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCccccccccccc
Q 004952 503 SCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~ 576 (722)
.||+||++.......... .....++|+|++++.++|+|++++++|.|+. ||+++ ..||++ +++.+.
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy~~------~~~~~~ 403 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCE--GEEASRGPNVFMGYLD------EPELTA 403 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCc--ceEEEecccccccccC------CHHHHH
Confidence 999999986544332211 1233578999999999999999999999985 99998 345554 444555
Q ss_pred cceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEE
Q 004952 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (722)
Q Consensus 577 ~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l 656 (722)
..|.. ..||+|||+++++++|+++++||.||+||++|.+|+|.+||++|. .+|+|.+++|++.+++..| +++
T Consensus 404 ~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~ 475 (547)
T PRK06087 404 RALDE------EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILL-QHPKIHDACVVAMPDERLG-ERS 475 (547)
T ss_pred HHhCC------CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHH-hCCCeeEEEEEecCCCCcC-ceE
Confidence 55542 239999999999999999999999999999999999999999995 8999999999999988777 899
Q ss_pred EEEEEecC-CCCCCHHHHHHHHH-HHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhhhhhc
Q 004952 657 VIFVVLKK-GFTSQPDKLKMIFS-KAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHELSVR 719 (722)
Q Consensus 657 ~a~vv~~~-~~~~~~~~l~~~l~-~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~~ 719 (722)
++++++.+ +...+.+++.++++ +.++.+++| .+.++++||+|.|||++|++|++++.+++...
T Consensus 476 ~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~~~~ 541 (547)
T PRK06087 476 CAYVVLKAPHHSLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRLTQD 541 (547)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHhhhh
Confidence 99999876 44556788888886 579999999 56699999999999999999999999887654
No 71
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-63 Score=569.53 Aligned_cols=500 Identities=17% Similarity=0.195 Sum_probs=395.8
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
..+|+++|+++.+. ..+.+||+||.++++++|++|++ . +++||+|+++++|++++++++|||+++|++++|++
T Consensus 21 ~~~~~~~a~~~~~~-----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 21 TVHGDTTVTTWGGA-----EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLN 95 (576)
T ss_pred HhCCCceEEEEcCC-----ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecc
Confidence 68999999997543 23589999999999999999987 6 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCC---CCCCCCCCCCHHHHhccc
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDV---GIPLREQDLSWKDFLSSV 339 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 339 (722)
|.++.+++.+++++++++++|+++... +.+.......+. .++++....... .........+|.++.+..
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLA------EQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR 169 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhH------HHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcC
Confidence 999999999999999999999987432 122222222222 122222111000 000111234577776533
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHh--hhhcCCCCCCEEEEecCccccchhHHHHH
Q 004952 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (722)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (722)
.. ..+.....++++++++|||||||.||||+++|+++....... ...+++.+++++++..|+.|+++...++.
T Consensus 170 ~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 244 (576)
T PRK05620 170 ST-----VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPLA 244 (576)
T ss_pred CC-----cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHHH
Confidence 21 122234567999999999999999999999999986544332 23577889999999999999999988889
Q ss_pred HhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccC
Q 004952 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (722)
Q Consensus 418 ~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~ 497 (722)
++..|+++++.+...++..+++.|+++++|++..+|+++..|+........+..+||.+++||+++++.+.+++...+ +
T Consensus 245 ~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~ 323 (576)
T PRK05620 245 AFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-G 323 (576)
T ss_pred HHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-C
Confidence 999999999987666888999999999999999999999988765433333456899999999999999988887665 5
Q ss_pred CcccccccccccccccccCCcCC---c----CccccccccCCCceEEEECCCCCcCC--CCCCccceEEE-----ecccC
Q 004952 498 NAIIESCGGTELSSAYIQGSLLQ---P----QAFGAFSTATMTAGLVILDECGVPYP--DDQPCVGEVGL-----FPLYL 563 (722)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~---~----~~~~~iG~p~~~~~~~vld~~~~~~p--~G~~giGel~v-----~~~y~ 563 (722)
+++++.||+||++..+....... . ....++|++.++++++|+|+ |++++ .|. +|||++ ..||+
T Consensus 324 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~--~Gel~v~g~~~~~gY~ 400 (576)
T PRK05620 324 VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDRN--EGEIQVRGNWVTASYY 400 (576)
T ss_pred CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCCC--ceEEEEEcCccccccc
Confidence 78999999999986544332211 0 12347899999999999998 77775 355 499998 34565
Q ss_pred CCcccccccccc----ccceeccccC------CCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhc
Q 004952 564 GASDRLLNADHE----EVYFRGMPMY------KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (722)
Q Consensus 564 ~~~~~~~~~~~t----~~~f~~~p~~------~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (722)
+ +++.+ +..|..+++. ...+||+|||+|++++||.++|+||.||+||++|.+|++.|||++|.
T Consensus 401 ~------~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~- 473 (576)
T PRK05620 401 H------SPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIM- 473 (576)
T ss_pred C------CccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHh-
Confidence 5 34444 5566544421 12459999999999999999999999999999999999999999995
Q ss_pred cCCCcceeEEEeecCCCCCceEEEEEEEecCCCC---CCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHH
Q 004952 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFT---SQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 634 ~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~---~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+||.|.+|+|++.+++..| +.++++++..++.. .+.++|+++|+++|+.|++|. ++++++||+|+|||++|++|+
T Consensus 474 ~~p~v~~~~vv~~~~~~~g-~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~ 552 (576)
T PRK05620 474 AAPEVVECAVIGYPDDKWG-ERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLR 552 (576)
T ss_pred cCCCceEEEEEeccCCCcC-ceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHH
Confidence 9999999999999998877 88999999877643 346899999999999999995 558999999999999999999
Q ss_pred HHHhh
Q 004952 710 DQIKH 714 (722)
Q Consensus 710 ~~~~~ 714 (722)
+++++
T Consensus 553 ~~~~~ 557 (576)
T PRK05620 553 QHLAD 557 (576)
T ss_pred HHHhc
Confidence 99875
No 72
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.7e-63 Score=560.59 Aligned_cols=474 Identities=20% Similarity=0.223 Sum_probs=390.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|+.+.+. .+||+||.++++++|+.|.+. +++||+|+++++++.++++++|||+++|++++|++
T Consensus 10 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 81 (502)
T TIGR01734 10 AETYPQTIAYRYQGQ--------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVD 81 (502)
T ss_pred HHHCCCceEEEcCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCC
Confidence 367899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
+.++.+++.++++.++++.++++....... .....+.+. ...+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------------~~~~~~~~~---------------~~~~~~~~~~~--- 131 (502)
T TIGR01734 82 TSIPSERIEMIIEAAGPELVIHTAELSIDA------------VGTQIITLS---------------ALEQAETSGGP--- 131 (502)
T ss_pred CcChHHHHHHHHHhcCCCEEEecccccccc------------cCCceEEch---------------HhhhhhhhcCC---
Confidence 999999999999999999999987432100 000111110 00111111100
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCE
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (722)
........++++++++|||||||.||||+++|+++...+.+....+++..+++++...|++|+.+++.++.++..|++
T Consensus 132 --~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~ 209 (502)
T TIGR01734 132 --VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGT 209 (502)
T ss_pred --ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCE
Confidence 001122356889999999999999999999999999988888888899999999999999999999989999999999
Q ss_pred EEEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 425 lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++.+.. .++..+++.++++++|.+.++|++++.++.........+++++.++++|++++++..+++.+.++++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 289 (502)
T TIGR01734 210 LHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN 289 (502)
T ss_pred EEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe
Confidence 9998753 36788999999999999999999998877654444556889999999999999999999998888899999
Q ss_pred cccccccccccccCCc----CCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCcccccccc
Q 004952 503 SCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~ 573 (722)
.||+||++++++.... .......++|.|+++++++|+|++++++|.|+. |||++ .+||++ +++
T Consensus 290 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~g~~~~~gy~~------~~~ 361 (502)
T TIGR01734 290 TYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEK--GEIVIVGPSVSKGYLN------NPE 361 (502)
T ss_pred CccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCe--eEEEEccccccccccC------Ccc
Confidence 9999999764433221 122234579999999999999999999999985 99998 346665 444
Q ss_pred ccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeec-CCCCC
Q 004952 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS-PAGGG 652 (722)
Q Consensus 574 ~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~-~~~~g 652 (722)
.+...|... .|.+||+|||+|+++++ +++++||.||+||++|++|+|.|||+.|. +||+|.+|+|++.. +...+
T Consensus 362 ~~~~~~~~~---~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~ 436 (502)
T TIGR01734 362 KTAEAFFSH---EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLR-QSSYIESAVVVPKYNKDHKV 436 (502)
T ss_pred cchHhheeC---CCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHH-cCCCccEEEEEEEEcCCCCc
Confidence 555555432 35679999999999976 99999999999999999999999999995 99999999999976 34344
Q ss_pred ceEEEEEEEecCCCCCC----HHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHh
Q 004952 653 PEVLVIFVVLKKGFTSQ----PDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIK 713 (722)
Q Consensus 653 ~~~l~a~vv~~~~~~~~----~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~ 713 (722)
+.++++|++.+....+ ..+++++++++|+.++.|. ++++++||+|++||++|++|++++.
T Consensus 437 -~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 437 -EYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred -eEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 7899999987643222 2678999999999999994 5599999999999999999999865
No 73
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.5e-63 Score=565.94 Aligned_cols=490 Identities=21% Similarity=0.227 Sum_probs=387.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+++.+. .+||.||+++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 34 ~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~ 105 (562)
T PRK12492 34 CKKFADRPAFSNLGV--------TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEecCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEecc
Confidence 468999999997665 89999999999999999987 5 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcC-------------C---C---CCCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPA-------------I---G---NDVGIP 324 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~---~~~~~~ 324 (722)
+|.++.+++.+++++++++++++++..... ...+........+.... . . ......
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK12492 106 NPLYTAREMRHQFKDSGARALVYLNMFGKL------VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAY 179 (562)
T ss_pred CccCCHHHHHHHHhccCceEEEeccccchH------HHHhhhccCceEEEeechhhccccccchhccccccccccccccc
Confidence 999999999999999999999997643211 11111110000000000 0 0 000000
Q ss_pred CCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC---------CC
Q 004952 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---------LK 395 (722)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~---------~~ 395 (722)
.......|++....... .........++++++|+|||||||.||||+++|+++...+......+. +.
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 180 HLPQAVPFKQALRQGRG----LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred CCcccccHHHHHhccCC----CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 01123445555433221 111123446689999999999999999999999999776655443332 23
Q ss_pred CC-CEEEEecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccce
Q 004952 396 VG-DVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (722)
Q Consensus 396 ~~-d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~L 473 (722)
.+ ++++...|+.|.++. +.++..+..|+++++.....++..+++.|+++++|++..+|+++..|.........+++++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 335 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSAL 335 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccce
Confidence 33 467888999999887 4566778899988877655577889999999999999999999999988765556678999
Q ss_pred eEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCcc
Q 004952 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCV 553 (722)
Q Consensus 474 r~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~gi 553 (722)
|.+++||+++++.+.+++.+.+ ++++++.||+||++.+++..........+++|+|+++++++|+|++++++|.|+.
T Consensus 336 r~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~-- 412 (562)
T PRK12492 336 KLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGER-- 412 (562)
T ss_pred eEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCCc--
Confidence 9999999999999988887654 6899999999999876544433333345789999999999999999999999985
Q ss_pred ceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHH
Q 004952 554 GEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 628 (722)
Q Consensus 554 Gel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE 628 (722)
|||++. .||++ +++.+.+.|.. ++||+|||+|+++++|.++|.||.||+||++|++|+|.|||
T Consensus 413 Gel~v~g~~~~~gY~~------~~~~t~~~~~~------~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE 480 (562)
T PRK12492 413 GELCIKGPQVMKGYWQ------QPEATAEALDA------EGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE 480 (562)
T ss_pred eEEEEeCCcccccccc------CchhhhhcccC------CCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHH
Confidence 999993 34554 55566666642 23999999999999999999999999999999999999999
Q ss_pred HHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHH
Q 004952 629 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRV 707 (722)
Q Consensus 629 ~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~ 707 (722)
+.|. .||.|.+++|++.++...+ +.+++|+++.++ ..+.++++++++++|+.+++| .+.++++||+|++||++|++
T Consensus 481 ~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~ 557 (562)
T PRK12492 481 DVVM-AHPKVANCAAIGVPDERSG-EAVKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRE 557 (562)
T ss_pred HHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHH
Confidence 9995 9999999999999887777 889999987653 356689999999999999999 55589999999999999999
Q ss_pred HHHH
Q 004952 708 LRDQ 711 (722)
Q Consensus 708 L~~~ 711 (722)
|+++
T Consensus 558 L~~~ 561 (562)
T PRK12492 558 LRDI 561 (562)
T ss_pred HHhh
Confidence 9875
No 74
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2e-63 Score=561.91 Aligned_cols=491 Identities=18% Similarity=0.207 Sum_probs=390.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++||++|+++.+. .+..+.+||+||.++++++|+.|.+. +++||+|+++++|+.++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~---~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 17 ADVYGHKTALIFESS---GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred HHHCCCceEEEcccC---CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcC
Confidence 468999999998653 13345899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC---CCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (722)
|.++.+++.++++++++++++++.... +.+..+.+.. ...+++..... ........+++.......
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDATPLRHICLTRVAL-----PADDGVSSFTQLKAQQPA 162 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccccCcEEEEecCCC-----cccccccCHHHHhccCCc
Confidence 999999999999999999999987432 2222222211 11222221110 011123445554433221
Q ss_pred CCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhh
Q 004952 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (722)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~ 420 (722)
.........++++++++|||||||.||||+++|++++...........+.+++++++..|+.|..+. ..++.++.
T Consensus 163 ----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 238 (517)
T PRK08008 163 ----TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFS 238 (517)
T ss_pred ----cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHh
Confidence 0111223456899999999999999999999999987654433334467889999999998886554 66788999
Q ss_pred cCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcc
Q 004952 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (722)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l 500 (722)
.|+++++.+ ..++..+++.++++++|++.++|++++.+............+++.+.+++ .+++....++.+.+ ++++
T Consensus 239 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~ 315 (517)
T PRK08008 239 AGATFVLLE-KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRL 315 (517)
T ss_pred cCcEEEEcc-ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeE
Confidence 999999987 56788999999999999999999999999876543333456788887764 67777777776654 6899
Q ss_pred cccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEec----ccCCCccccccccccc
Q 004952 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFP----LYLGASDRLLNADHEE 576 (722)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~----~y~~~~~~~~~~~~t~ 576 (722)
++.||+||++..++...........++|+|+++++++|+|+++++++.|+. |||++.. ++.. .|+.+++.++
T Consensus 316 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~~~--gy~~~~~~~~ 391 (517)
T PRK08008 316 LTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEI--GEICIKGVPGKTIFK--EYYLDPKATA 391 (517)
T ss_pred EeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCc--ceEEEeCCCCcchhh--hHhCChHHHh
Confidence 999999999865554444444455789999999999999999999999995 9999842 2111 1222556677
Q ss_pred cceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEE
Q 004952 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (722)
Q Consensus 577 ~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l 656 (722)
+.|..+. ||+|||+|++++||.++++||.||+||++|++|+|.|||++|. .||.|.+++|++++++..+ +.+
T Consensus 392 ~~~~~~g------~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~-~~~~v~~~~v~g~~~~~~~-~~~ 463 (517)
T PRK08008 392 KVLEADG------WLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIA-THPKIQDIVVVGIKDSIRD-EAI 463 (517)
T ss_pred hcccCCC------CeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHH-hCCceeeEEEEccCCCCCC-ceE
Confidence 7776432 9999999999999999999999999999999999999999995 9999999999999988776 889
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHH
Q 004952 657 VIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 657 ~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+++|+++++...+.++++++++++++.+++| .++++++||+|++||++|+.|+
T Consensus 464 ~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 464 KAFVVLNEGETLSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EEEEEECCCCCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 9999998876677789999999999999999 4558999999999999999874
No 75
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-63 Score=561.81 Aligned_cols=498 Identities=19% Similarity=0.230 Sum_probs=393.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++||+++++.... +..+++||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~~~~~~~~~~~~----~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 95 (542)
T PRK06018 20 ARIHGNREVVTRSVE----GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVN 95 (542)
T ss_pred HHhCCCceEEEeecc----CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccc
Confidence 478999999985322 1234899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
|.++.+++..+++++++++++++..+. +.+..+....+. ..+++....... ....++...+.+++.....
T Consensus 96 ~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 167 (542)
T PRK06018 96 PRLFPEQIAWIINHAEDRVVITDLTFV------PILEKIADKLPSVERYVVLTDAAHMP-QTTLKNAVAYEEWIAEADG- 167 (542)
T ss_pred cccCHHHHHHHHhccCCCEEEEccccH------HHHHHHHhhCCCccEEEEeccccccc-ccCccccccHHHHhccCCc-
Confidence 999999999999999999999987432 222222222222 222222111100 0011133456666544321
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHH-H-HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhh
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-R-CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~-~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~ 420 (722)
........++++++++|||||||.||||+++|++.+ + ........+++..+|+++...|+.|+.+....+.++.
T Consensus 168 ----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~ 243 (542)
T PRK06018 168 ----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPS 243 (542)
T ss_pred ----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhh
Confidence 112233466889999999999999999999999743 2 2223345677889999999999999888766778899
Q ss_pred cCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcc
Q 004952 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (722)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l 500 (722)
.|+++++.....++..++++++++++|++.++|++++.|.+.......++++||.+++|||++++++.+++.+ .++++
T Consensus 244 ~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~--~~~~~ 321 (542)
T PRK06018 244 MGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED--MGVEV 321 (542)
T ss_pred cCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH--hCCCe
Confidence 9999998765667788999999999999999999999998766555567889999999999999999999887 47899
Q ss_pred cccccccccccccccCCcCCc----------CccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-cccCCCcccc
Q 004952 501 IESCGGTELSSAYIQGSLLQP----------QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-PLYLGASDRL 569 (722)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~----------~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-~~y~~~~~~~ 569 (722)
++.||+||++.+.+......+ ....++|+|.++++++|+|++++++|.+...+||+++. +.... .|
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~---gy 398 (542)
T PRK06018 322 RHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAA---AY 398 (542)
T ss_pred EeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcch---hh
Confidence 999999999865443321110 11357899999999999999999998643225999993 22111 12
Q ss_pred ccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCC
Q 004952 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (722)
Q Consensus 570 ~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~ 649 (722)
++. +...+. ..+||+|||++++++||+++++||.||+||++|++|++.|||+.+. +||+|.+|+|++.+++
T Consensus 399 ~~~--~~~~~~------~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~ 469 (542)
T PRK06018 399 YRV--DGEILD------DDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV-GHPKVAEAAVIGVYHP 469 (542)
T ss_pred hcC--cccEec------CCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH-hCCcceeEEEEeccCC
Confidence 221 111221 2349999999999999999999999999999999999999999995 9999999999999998
Q ss_pred CCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 650 ~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
..+ +.++++|++.++...+.++++++++++++.++.| .+..+++||+|++||++|++|++.+.+
T Consensus 470 ~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 470 KWD-ERPLLIVQLKPGETATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred CcC-ceeEEEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 777 8899999988877777889999999999999999 455999999999999999999998876
No 76
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-63 Score=559.58 Aligned_cols=478 Identities=19% Similarity=0.188 Sum_probs=373.9
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
+++++|+++|+++.+.+ .++||+||.++++++|+.|.++ +++||+|+++++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 6 HAQIAPDRPAVIVAETG------EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhhCCCCcEEEecCCC------eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 34689999999875321 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
++.++++++.+++++++++++++++... .......... ...+.+. .. ......+++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~-~~~~~~~--~~------~~~~~~~~~~~~~~~~-- 142 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD------GLAAKVGADL-PLRLSFG--GE------IDGFGSFEAALAGAGP-- 142 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh------hHHHHhhhcc-ceEEEec--Cc------ccccccHHHHhcccCC--
Confidence 9999999999999999999999976431 0011110000 0011111 00 0111223333221110
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEe--CChHHHHH----HHHhhhhcCCCCCCEEEEecCccccchhHHHHH
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW--TQLSSIRC----TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~--th~~~~~~----~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (722)
......++++|+|||||||.||||++ +|+++... .......+++..+++++..+|++|+.++...+.
T Consensus 143 -------~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~ 215 (501)
T PRK13390 143 -------RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSM 215 (501)
T ss_pred -------CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHH
Confidence 01122357999999999999999995 55655432 112234567889999999999999988755556
Q ss_pred HhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHhhc
Q 004952 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (722)
Q Consensus 418 ~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~ 495 (722)
.+..|+++++.+ ..++..+++.|+++++|++.++|+++..|..... ....+++++|.+++||+++++++.+.+.+.+
T Consensus 216 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~ 294 (501)
T PRK13390 216 VHALGGTVVLAK-RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL 294 (501)
T ss_pred HHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc
Confidence 678899998876 4578899999999999999999999999886532 2345678999999999999999988887654
Q ss_pred cCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccc
Q 004952 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLL 570 (722)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~ 570 (722)
+.++++.||+||++.++...........+++|+|+++ .++|+|++++++|.|++ |||++. .||++
T Consensus 295 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------ 364 (501)
T PRK13390 295 -GPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRI--GTVYFERDRLPFRYLN------ 364 (501)
T ss_pred -CCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCCccccccC------
Confidence 5789999999999864433222222345789999999 69999999999999996 999993 34444
Q ss_pred cccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCC
Q 004952 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (722)
Q Consensus 571 ~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~ 650 (722)
+++.|++.|... +..||+|||+|++++||++++.||.||+||++|+||+|.|||++|. .||+|.+++|++++++.
T Consensus 365 ~~~~t~~~~~~~----~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~ 439 (501)
T PRK13390 365 DPEKTAAAQHPA----HPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALT-MHPAVHDVAVIGVPDPE 439 (501)
T ss_pred ChhhhHHhhccC----CCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHH-hCCCeeEEEEEeccCcc
Confidence 555666655421 2249999999999999999999999999999999999999999995 99999999999999988
Q ss_pred CCceEEEEEEEecCCCCCC---HHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHH
Q 004952 651 GGPEVLVIFVVLKKGFTSQ---PDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 651 ~g~~~l~a~vv~~~~~~~~---~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~ 709 (722)
.+ +.+++++++.++...+ .++++++++++|+.||.| .++++++||+|++||++|++|+
T Consensus 440 ~~-e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 440 MG-EQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred cC-ceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 77 8999999987654332 358899999999999999 4558999999999999999984
No 77
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-63 Score=560.52 Aligned_cols=496 Identities=20% Similarity=0.174 Sum_probs=392.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++||++|+++.++ .+||.||+++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 13 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~ 84 (533)
T PRK07798 13 ADAVPDRVALVCGDR--------RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVN 84 (533)
T ss_pred HHhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecC
Confidence 478999999999766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc--EEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
+.++.+++.+++++++++++++++... +....+....+.. .+.+..... .....+..++.+++.....
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 85 YRYVEDELRYLLDDSDAVALVYEREFA------PRVAEVLPRLPKLRTLVVVEDGSG---NDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCCCHHHHHHHHhhcCCCEEEEchhhH------HHHHHHhccCCCccEEEEecCCcc---cccCCccccHHHHHhccCC-
Confidence 999999999999999999999987432 1122222222221 222221111 1111234567776654322
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhh---------cCC------CCCCEEEEecCcc
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---------IDL------KVGDVYCWPTNLG 407 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~---------~~~------~~~d~~l~~~~~~ 407 (722)
...... ...+.++++|||||||.||||+++|+++.......... ..+ ..+++++...|+.
T Consensus 155 ----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 229 (533)
T PRK07798 155 ----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLM 229 (533)
T ss_pred ----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchh
Confidence 011111 22445799999999999999999999987654432211 111 5678999999999
Q ss_pred ccchhHHHHHHhhcCCEEEEecC-CCChhhHHHHHHHhCCcEEechhHHHH-HHHhcCC-CCCCCccceeEEEeecCCCC
Q 004952 408 WVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVK-AWRNTNC-LEGLDWTKIRSFASTGETSN 484 (722)
Q Consensus 408 ~~~~~~~~~~~L~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~-~l~~~~~-~~~~~l~~Lr~i~~~Ge~l~ 484 (722)
|+.+++.++.+|+.|+++++.+. ..++..+++.|+++++|++.++|..+. .+..... ....+++++|.+++||++++
T Consensus 230 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~ 309 (533)
T PRK07798 230 HGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFS 309 (533)
T ss_pred hhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCC
Confidence 99999999999999999999873 457889999999999999999986553 3333222 23456789999999999999
Q ss_pred cchHHHHHhhccCCcccccccccccccccccCCcCCcCcccccc--ccCCCceEEEECCCCCcCCCCCCccceEEEeccc
Q 004952 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS--TATMTAGLVILDECGVPYPDDQPCVGEVGLFPLY 562 (722)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG--~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y 562 (722)
+.+.+++.+.+++..+++.||+||++.+........ ....| ++.++..++|+|+++++++.|+.+.|+++.++..
T Consensus 310 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---~~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~~ 386 (533)
T PRK07798 310 PSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG---AVHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGHI 386 (533)
T ss_pred HHHHHHHHHHcCCCeEEeeecccccccccccCCCCC---CccCCCCccCCCceEEEECCCCCCCCCCCCCeeEEEeecCc
Confidence 999999988877889999999999975443332211 12233 7889999999999999999998755777765422
Q ss_pred CCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeE
Q 004952 563 LGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETA 642 (722)
Q Consensus 563 ~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~ 642 (722)
.. .++.+++.+++.|.. ..|.+||+|||++++++||+++++||.||+||++|++|+|.|||++|. ++|+|.+++
T Consensus 387 ~~--gy~~~~~~t~~~f~~---~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~ 460 (533)
T PRK07798 387 PL--GYYKDPEKTAETFPT---IDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALK-AHPDVADAL 460 (533)
T ss_pred cc--cccCChhhhHHhhcc---CCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHH-hCccceeEE
Confidence 11 223355667766654 236679999999999999999999999999999999999999999995 999999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 643 AISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 643 vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
|++.++...+ +.++++++++++...+.++++++++++|+.|++| .++.+++||+|++||++|+.|+++.++
T Consensus 461 v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 461 VVGVPDERWG-QEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred EEeccCcccC-ceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhcc
Confidence 9999887777 8899999988776678899999999999999999 456899999999999999999998875
No 78
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-63 Score=560.98 Aligned_cols=477 Identities=19% Similarity=0.195 Sum_probs=374.6
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v-~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
.+|+++|+++.+. .+||+||.++++++|..|.+. + ++||+|+++++|++++++++|||+++|++++|++|
T Consensus 13 ~~p~~~Al~~~~~--------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p 84 (540)
T PRK13388 13 AGDDTIAVRYGDR--------TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNT 84 (540)
T ss_pred ccCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecc
Confidence 3699999998766 999999999999999999999 9 89999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
.++.+++..++++++++++|+++.... ....+. .....++++. ...+.+++.....
T Consensus 85 ~~~~~~l~~~l~~~~~~~~i~~~~~~~------~~~~~~-~~~~~~i~~~-------------~~~~~~~~~~~~~---- 140 (540)
T PRK13388 85 TRRGAALAADIRRADCQLLVTDAEHRP------LLDGLD-LPGVRVLDVD-------------TPAYAELVAAAGA---- 140 (540)
T ss_pred cCChHHHHHHHHhcCCCEEEEChhhhH------HHHhhc-ccCceEEEcc-------------chhhhhhhccccC----
Confidence 999999999999999999999875321 111110 0011222221 0123333321111
Q ss_pred CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHH-HHHhhcCCE
Q 004952 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVIL-FSSFLNGAT 424 (722)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~-~~~L~~G~~ 424 (722)
..+.....++++++++|||||||.||||+++|+++..........+++.++|+++...|+.|..++... +.+|..|++
T Consensus 141 -~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 141 -LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred -cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 111123467999999999999999999999999998888877788999999999999999999988554 457999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
+++.+ ..++..+++.|+++++|++..+|+.+..++..........++++.+ + |+.+++....++.+.+ +++++|.|
T Consensus 220 ~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~Y 295 (540)
T PRK13388 220 VALPA-KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGY 295 (540)
T ss_pred EEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceeccc
Confidence 98875 4677889999999999999999999999887543222223466643 3 5556777777776665 57899999
Q ss_pred cccccccccccCCcCCcCccccccccCCCceEE-----------EECCCCCcCC-CCCCccceEEEecccCCCccccccc
Q 004952 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV-----------ILDECGVPYP-DDQPCVGEVGLFPLYLGASDRLLNA 572 (722)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~-----------vld~~~~~~p-~G~~giGel~v~~~y~~~~~~~~~~ 572 (722)
|+||++.++.... ....+++|+|++|++++ ++|++|++++ .|. +|||++..|..-...|+.++
T Consensus 296 G~tE~~~~~~~~~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~--~GEl~v~~g~~~~~gY~~~~ 370 (540)
T PRK13388 296 GSSEGAVIVVREP---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEA--IGELVNTAGAGFFEGYYNNP 370 (540)
T ss_pred ccccccceeecCC---CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCc--ceEEEEecCCcccccccCCh
Confidence 9999986554321 12356899999997753 5566676663 344 59999842111111222355
Q ss_pred cccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCC
Q 004952 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (722)
Q Consensus 573 ~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g 652 (722)
+.+++.|.. | ||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+|+|++++++..|
T Consensus 371 ~~t~~~~~~-----g--~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~g~~~~~~g 442 (540)
T PRK13388 371 EATAERMRH-----G--MYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILL-RHPAINRVAVYAVPDERVG 442 (540)
T ss_pred HHHHHHhhc-----C--ceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHH-hCCCceEEEEEEccCCCCC
Confidence 566666631 2 9999999999999999999999999999999999999999995 9999999999999988777
Q ss_pred ceEEEEEEEecCCCCCCHHHHHHHHHHH--HHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKA--IQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~--l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+.+++++++.++...+.++++++++.+ |+.+++|. ++++++||+|++||++|++|+++....
T Consensus 443 -~~~~~~v~~~~~~~~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 443 -DQVMAALVLRDGATFDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred -ceeEEEEEECCCCcCCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 788888888877667788999999864 99999995 448899999999999999999976554
No 79
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=6.5e-64 Score=578.09 Aligned_cols=499 Identities=19% Similarity=0.154 Sum_probs=364.7
Q ss_pred CCCCCCceEEEEecC-CCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+.+... .+..+.++.+||+||+++++++|++|.+. +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 53 ~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 132 (660)
T PLN02861 53 VKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPL 132 (660)
T ss_pred HHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 478999999975310 01123456899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC--C-cEEEEcCCCCCCC---CCCCCCCCCHHHHhc
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--L-KAIVLPAIGNDVG---IPLREQDLSWKDFLS 337 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 337 (722)
+|.++.+++.+++++++++++|+++... +.........+ . .++.+........ ........+|.++..
T Consensus 133 ~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02861 133 YDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSL 206 (660)
T ss_pred cCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHH
Confidence 9999999999999999999999976431 11111112111 1 2222211100000 000111245666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC-----CCCCCEEEEecCccccchh
Q 004952 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-----LKVGDVYCWPTNLGWVMGP 412 (722)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~-----~~~~d~~l~~~~~~~~~~~ 412 (722)
.... ........++|+++|+|||||||.||||++||++++..+......++ +.++|++++++|++|.++.
T Consensus 207 ~~~~-----~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 281 (660)
T PLN02861 207 MGSL-----DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQ 281 (660)
T ss_pred hCcc-----cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHH
Confidence 3321 01122346799999999999999999999999999887765544433 4788999999999999887
Q ss_pred HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcC-----------------------------
Q 004952 413 VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----------------------------- 463 (722)
Q Consensus 413 ~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~----------------------------- 463 (722)
...+.+++.|+++++.+ .++..+++.|+++++|+++++|+++..|.+..
T Consensus 282 ~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~ 359 (660)
T PLN02861 282 VIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKG 359 (660)
T ss_pred HHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcC
Confidence 55566899999998874 36788999999999999999999999886410
Q ss_pred --------CCCCC-------Cc-cceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccc
Q 004952 464 --------CLEGL-------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAF 527 (722)
Q Consensus 464 --------~~~~~-------~l-~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~i 527 (722)
..... .+ ++||.+++||+++++++.+ +...++..+++|.||+||+++.++..........+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsv 438 (660)
T PLN02861 360 LKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTV 438 (660)
T ss_pred CCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCc
Confidence 00000 01 5899999999999998755 4444444579999999999764443322222345799
Q ss_pred cccCCCceEEEEC--CCC-CcCCCCCCccceEEE-----ecccCCCccccccccccccceeccccCCCceecccCceEEE
Q 004952 528 STATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR 599 (722)
Q Consensus 528 G~p~~~~~~~vld--~~~-~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~ 599 (722)
|+|+++++++|+| +.| ..++.+. .|||++ ..||++ +++.|++.|.. | ||+|||+|++
T Consensus 439 G~p~p~~ev~i~d~~~~g~~~~~~~~--~GEi~vrGp~v~~GY~~------~pe~T~~~f~d-----G--w~~TGDlg~~ 503 (660)
T PLN02861 439 GVPMTTIEARLESVPEMGYDALSDVP--RGEICLRGNTLFSGYHK------RQDLTEEVLID-----G--WFHTGDIGEW 503 (660)
T ss_pred cCccCceEEEEEEccccCcccCCCCC--ceeEEEcCCcccccccC------CHHHHHhhhhc-----c--CcccCceEEE
Confidence 9999999999998 444 3344444 399998 345554 66788888841 3 9999999999
Q ss_pred ecCCcEEEEeecCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC----------CC
Q 004952 600 TVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF----------TS 668 (722)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~----------~~ 668 (722)
|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+|+|++.+. + +.++|+|++.... ..
T Consensus 504 d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~-~~p~V~~a~V~G~~~---~-~~~~A~vv~~~~~l~~~~~~~~~~~ 578 (660)
T PLN02861 504 QPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYS-RCPLIASIWVYGNSF---E-SFLVAVVVPDRQALEDWAANNNKTG 578 (660)
T ss_pred CCCCcEEEEeccccceEcCCCeEEcHHHHHHHHh-cCCCeeEEEEEecCC---c-ceeEEEEEcCHHHHHHHHHHcCCCC
Confidence 999999999999999997 799999999999995 999999999999762 3 6899999986320 01
Q ss_pred CHH----------HHHHHHHHH-----HHhhcCCC-eee-cCCC-----CCCCCchhhHHHHHHHHhhhhhh
Q 004952 669 QPD----------KLKMIFSKA-----IQSKLNPL-FKV-VPEF-----PRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 669 ~~~----------~l~~~l~~~-----l~~~~~p~-~~~-v~~l-----P~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
+.. .+.+.+.+. ++.+-.++ +.. -+.| .+|+++|+.|+.+.+.|++++++
T Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 579 DFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHH
Confidence 111 122223221 23333332 223 3456 89999999999999999998875
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.9e-63 Score=614.16 Aligned_cols=498 Identities=17% Similarity=0.206 Sum_probs=395.7
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
++++||++|+++... +++||+||+++++++|++|.+.+++||+|+++++|++++++++|||+++|++++|++|
T Consensus 625 a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 625 AKRNWSRLAVADSTG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNY 697 (1146)
T ss_pred HHhcCCCcEEEcCCC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCC
Confidence 478999999986432 2899999999999999999755999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
.++.+++.+++++++++++++++............... ....+.+.+..... .. .....+.+....... +..
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~-~~~ 769 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLEL--PENVKVIYLEDLKA----KI-SKVDKLTALLAARLL-PAR 769 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhc--ccCceEEEeehhcc----cc-chhHHHHHHHHhccC-CHH
Confidence 99999999999999999999987543211100000000 00111222211000 00 000112222111100 000
Q ss_pred --CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhH-HHHHHhhcC
Q 004952 346 --NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNG 422 (722)
Q Consensus 346 --~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G 422 (722)
.........++|+++++|||||||.||||+++|+++.+.+......++++++|++++..|+.|..+.. .++.+++.|
T Consensus 770 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g 849 (1146)
T PRK08633 770 LLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEG 849 (1146)
T ss_pred HHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCC
Confidence 00001234679999999999999999999999999999888887888999999999999999999984 478999999
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++++.+...++..+++.++++++|++.++|++++.+.+.......+++++|.+++|||++++++.+++.+.+ +++++|
T Consensus 850 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~~~ 928 (1146)
T PRK08633 850 IKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRILE 928 (1146)
T ss_pred CEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCeec
Confidence 9999987667888999999999999999999999999886555566789999999999999999999888776 689999
Q ss_pred cccccccccccccCCcC---------CcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEE-----ecccCCCcc
Q 004952 503 SCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASD 567 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~ 567 (722)
.||+||++..++..... .....+++|+|+||++++|+| ++++++|.|+. |||++ ..||++
T Consensus 929 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~gY~~--- 1003 (1146)
T PRK08633 929 GYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGED--GLILIGGPQVMKGYLG--- 1003 (1146)
T ss_pred ccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCc--eEEEEcCCCccccccC---
Confidence 99999998654433221 112457899999999999999 56899999996 99998 345555
Q ss_pred ccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCC--CcceeEEEe
Q 004952 568 RLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADE--SILETAAIS 645 (722)
Q Consensus 568 ~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p--~V~~~~vv~ 645 (722)
+++.|++.|... +|.+||+|||+|++|+||+++++||.||+||++|++|+|.|||++|. +|| .+.+++|++
T Consensus 1004 ---~~~~t~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~~~~~~~~v~~ 1076 (1146)
T PRK08633 1004 ---DPEKTAEVIKDI---DGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELA-KALGGEEVVFAVTA 1076 (1146)
T ss_pred ---CccchHHHhhcC---CCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHH-hccCCCCceEEEEe
Confidence 555677666542 35679999999999999999999999999999999999999999995 898 567899999
Q ss_pred ecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHH-HHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 646 VSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSK-AIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 646 ~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~-~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
++++..| ++++++++.. ..+.+++++++++ ++|.|++| .++.+++||+|+|||+||++|+++.++.
T Consensus 1077 ~~~~~~g-~~~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1077 VPDEKKG-EKLVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred ccCCCCC-cEEEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 9998888 8999999863 3456889998875 69999999 4559999999999999999999986653
No 81
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-62 Score=553.07 Aligned_cols=469 Identities=20% Similarity=0.225 Sum_probs=378.5
Q ss_pred CCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 004952 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (722)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~--v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~ 266 (722)
.++++|+++.+. .+||+||.++++++|++|+++ +++|++|+++++|++++++++|||+++|++++|++|.
T Consensus 16 ~~~~~a~~~~~~--------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 87 (529)
T PRK07867 16 EDDDRGLYFEDS--------FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPT 87 (529)
T ss_pred ccCCceEEECCc--------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCC
Confidence 378999998776 999999999999999999996 8899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCC
Q 004952 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (722)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (722)
++.+++.+++++++++++++++... +....+ .....++.. ....|.+++..... .
T Consensus 88 ~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~----~~~~~~~~~-----------~~~~~~~~l~~~~~----~ 142 (529)
T PRK07867 88 RRGAALARDIAHADCQLVLTESAHA------ELLDGL----DPGVRVINV-----------DSPAWADELAAHRD----A 142 (529)
T ss_pred CChHHHHHHHHhCCCeEEEECHhHH------HHHHhh----ccCceEEEe-----------ccccHHHHhcccCC----C
Confidence 9999999999999999999997543 111111 111111111 11124444432211 1
Q ss_pred CCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhH-HHHHHhhcCCEE
Q 004952 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATL 425 (722)
Q Consensus 347 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~L~~G~~l 425 (722)
........++++++++|||||||.||||+++|+++..........++++++|+++...|+.|..+++ .++.++..|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 143 EPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred CCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 1122335678999999999999999999999999988888777888999999999999999999884 466789999999
Q ss_pred EEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccccc
Q 004952 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (722)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG 505 (722)
++.+ ..++..+++.++++++|++.++|+.+..++..........+++|. ++||+.+++.. .++.+.+ +++++|.||
T Consensus 223 ~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG 298 (529)
T PRK07867 223 ALRR-KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFG 298 (529)
T ss_pred EecC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeec
Confidence 8876 467889999999999999999999999988764432233467884 56888887665 4455554 678999999
Q ss_pred ccccccccccCCcCCcCccccccccCCCceEEEEC-CCCCcCCCCC----------CccceEEE-e-----cccCCCccc
Q 004952 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQ----------PCVGEVGL-F-----PLYLGASDR 568 (722)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~----------~giGel~v-~-----~~y~~~~~~ 568 (722)
+||+++...... ....+++|.|+++ ++|+| +++++++.|+ ..+||+++ . .||++
T Consensus 299 ~TE~~~~~~~~~---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~---- 369 (529)
T PRK07867 299 STEGGVAITRTP---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYN---- 369 (529)
T ss_pred ccccccccccCC---CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccC----
Confidence 999986443221 1234678999999 67888 5788899887 01399987 2 34444
Q ss_pred cccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecC
Q 004952 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (722)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~ 648 (722)
+++.+.+.|.. | ||+|||+|+++++|+++|+||.||+||++|++|+|.|||++|. .||+|.+|+|+++++
T Consensus 370 --~~~~~~~~~~~-----g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~V~g~~~ 439 (529)
T PRK07867 370 --DPEADAERMRG-----G--VYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILL-RYPDATEVAVYAVPD 439 (529)
T ss_pred --ChHhhhhhhcC-----C--eEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHH-hCCCeeEEEEEeccC
Confidence 44555555531 2 9999999999999999999999999999999999999999995 999999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCCHHHHHHHHHHH--HHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKA--IQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~--l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+..| +++++++++.++...+.++++++++++ |+.++.|. ++++++||+|++||++|+.|+++...
T Consensus 440 ~~~g-~~~~a~vv~~~~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 440 PVVG-DQVMAALVLAPGAKFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred CCCC-eeEEEEEEECCCCCCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCC
Confidence 8888 899999999887778889999999876 99999994 55899999999999999999997643
No 82
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-62 Score=548.55 Aligned_cols=451 Identities=20% Similarity=0.199 Sum_probs=375.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
.+..++++|+++.++ ++||+||.++++++|..|+ ++|+|++++++++++++++|||+++|++++|++|
T Consensus 10 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 77 (471)
T PRK07787 10 AAAADIADAVRIGGR--------VLSRSDLAGAATAVAERVA----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPP 77 (471)
T ss_pred hcccCCceEEEeCCc--------EEEHHHHHHHHHHHHHHhc----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCC
Confidence 356799999999777 9999999999999999986 6899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
..+.+++.++++++++++++++.... . ...+...+.. ....+
T Consensus 78 ~~~~~~l~~~l~~~~~~~il~~~~~~-----~-------~~~~~~~~~~-------------~~~~~------------- 119 (471)
T PRK07787 78 DSGVAERRHILADSGAQAWLGPAPDD-----P-------AGLPHVPVRL-------------HARSW------------- 119 (471)
T ss_pred CCChHHHHHHHHhcCCCEEEecCCcc-----c-------ccccceeeec-------------ccccc-------------
Confidence 99999999999999999999976310 0 0000000000 00000
Q ss_pred CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCE
Q 004952 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (722)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~ 424 (722)
.......+++++|++|||||||.||||+++|+++...+......+++.+++++++..|+.|..++ ..++.++..|++
T Consensus 120 --~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 197 (471)
T PRK07787 120 --HRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNR 197 (471)
T ss_pred --ccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCE
Confidence 00112356899999999999999999999999999988877778889999999999999998887 568899999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
+++.+ ..++..+++.|+ +++|++.++|+++..|.+... ....++++|.+++||+++++.+.+++.+.+ +.+++|.|
T Consensus 198 ~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~Y 273 (471)
T PRK07787 198 FVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERY 273 (471)
T ss_pred EEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccccccceeEEEECCCCCCHHHHHHHHHHc-CCCeeccc
Confidence 99876 467889999999 999999999999999987532 234578999999999999999988887765 57899999
Q ss_pred cccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCC-CCCCccceEEEe-----cccCCCccccccccccccc
Q 004952 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGLF-----PLYLGASDRLLNADHEEVY 578 (722)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p-~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~ 578 (722)
|+||++...+.. ........++|+|++++.++|+|+++++++ .|+. +|||++. .||++ +++.+++.
T Consensus 274 G~tE~~~~~~~~-~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~-~Gei~v~g~~~~~gy~~------~~~~t~~~ 345 (471)
T PRK07787 274 GMTETLITLSTR-ADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGET-VGELQVRGPTLFDGYLN------RPDATAAA 345 (471)
T ss_pred CccccCcceecC-CCCcccCCcccccCCCcEEEEECCCCCCCCCCCCC-ceEEEEECcccchhhcC------Chhhchhc
Confidence 999998643322 222334568999999999999999999997 3432 5999993 34444 55567767
Q ss_pred eeccccCCCceecccCceEEEecCCcEEEEeec-CCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA-DDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 579 f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~-dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
|..+ .||+|||+|++++||.++++||+ |++||++|++|+|.|||++|. .+|.|.+++|++.++...+ +.++
T Consensus 346 ~~~~------~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 417 (471)
T PRK07787 346 FTAD------GWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALL-GHPGVREAAVVGVPDDDLG-QRIV 417 (471)
T ss_pred ccCC------CceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHH-hCCCcceEEEEcccccccC-eEEE
Confidence 7543 29999999999999999999996 899999999999999999995 9999999999999887776 8999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHH
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRD 710 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~ 710 (722)
+||++.. ..+.+++.++++++|+.++.| .++++++||+|+|||++|++|++
T Consensus 418 a~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 418 AYVVGAD--DVAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred EEEEeCC--CCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 9999843 356789999999999999999 45589999999999999999975
No 83
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.7e-62 Score=559.46 Aligned_cols=491 Identities=20% Similarity=0.233 Sum_probs=388.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~-~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+++.++ .+||+||.++++++|+.|. +. +++||+|++++++++++++++|||+++|++++|+
T Consensus 35 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 35 VAKFADRPAYHSFGK--------TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNV 106 (560)
T ss_pred HHhCCCCceEEECCc--------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEecc
Confidence 368899999998766 9999999999999999997 57 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCC-------------------CCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND-------------------VGIP 324 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 324 (722)
+|.++.+++.+++++++++++++++... ..........+...+++...... ....
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFG------TTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhH------HHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 9999999999999999999999987432 11111111122111111100000 0000
Q ss_pred CCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC----CCCC-CE
Q 004952 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID----LKVG-DV 399 (722)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~----~~~~-d~ 399 (722)
..+....+.+....... ...+.....++++++++|||||||.||||+++|+++...+.+....++ +.++ ++
T Consensus 181 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08751 181 RINGAIRFREALALGRK----HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEV 256 (560)
T ss_pred CCCccccHHHHHhccCC----CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCce
Confidence 01122334444332211 111223456789999999999999999999999999887766554443 3444 46
Q ss_pred EEEecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEe
Q 004952 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (722)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~ 478 (722)
++...++.|.++. ...+.++..|+++++.....++..+++.|+++++|++..+|+++..+.+.......++++||.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~ 336 (560)
T PRK08751 257 VITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLG 336 (560)
T ss_pred EEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeee
Confidence 6777888888776 345677888999888776667888999999999999999999999999876555667889999999
Q ss_pred ecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE
Q 004952 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (722)
Q Consensus 479 ~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (722)
||+++++.+.+.+.+.+ ++++++.||+||++..++..........+++|.|++++.++|+|++++++|.|+. ||+++
T Consensus 337 gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v 413 (560)
T PRK08751 337 GGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEI--GELCI 413 (560)
T ss_pred CCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEE
Confidence 99999999988887754 6789999999999865544332223445789999999999999999999999985 99999
Q ss_pred e-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhc
Q 004952 559 F-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (722)
Q Consensus 559 ~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (722)
. .||++ +++.+++.|.. ..||+|||+|+++++|.++++||.||+||++|++|+|.|||++|.
T Consensus 414 ~~~~~~~gy~~------~~~~~~~~~~~------~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~- 480 (560)
T PRK08751 414 KGPQVMKGYWK------RPEETAKVMDA------DGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA- 480 (560)
T ss_pred ecCccchhhcC------Chhhhhhcccc------CCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH-
Confidence 3 34444 55567666643 239999999999999999999999999999999999999999995
Q ss_pred cCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHH
Q 004952 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQI 712 (722)
Q Consensus 634 ~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~ 712 (722)
.||+|.+|+|+++++...| +.++++++.+ +...+.++++++++++++.|+.|. ++++++||+|++||++|++|++..
T Consensus 481 ~~~~v~~~~v~~~~~~~~g-e~~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~~ 558 (560)
T PRK08751 481 MMPGVLEVAAVGVPDEKSG-EIVKVVIVKK-DPALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDAA 558 (560)
T ss_pred hCcCeeeeEEEecCCCCCC-ceEEEEEEcC-CCCCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHhh
Confidence 9999999999999988777 7788877765 345567899999999999999995 559999999999999999998763
No 84
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-62 Score=553.08 Aligned_cols=481 Identities=18% Similarity=0.200 Sum_probs=393.1
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++|+++|+++.+. .+||.||.++++++|+.|.+. +++|++|++++++++++++++|||+++|++++|++|
T Consensus 23 ~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 94 (524)
T PRK06188 23 KRYPDRPALVLGDT--------RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHP 94 (524)
T ss_pred HHCCCCeEEEECCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEeccc
Confidence 68999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
..+.+++..++++++++.+++++... ...........+. ..+.+.... ...++.......
T Consensus 95 ~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~- 156 (524)
T PRK06188 95 LGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPSLKHVLTLGPVP------------DGVDLLAAAAKF- 156 (524)
T ss_pred CCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCCceEEEEeCCcc------------chhhHHHhhhcc-
Confidence 99999999999999999999986421 0111111111111 111111100 011111111000
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~ 423 (722)
..... .....++++++++|||||||.||||+++|+++.+.+......+++..++++++..|++|..+.. ++.+++.|+
T Consensus 157 ~~~~~-~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~ 234 (524)
T PRK06188 157 GPAPL-VAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGG 234 (524)
T ss_pred Ccccc-cccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCC
Confidence 00011 1122356799999999999999999999999999888888889999999999999999987764 678899999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++++.+ ..++..+++.++++++|++.++|+++..|++.......+++++|.+++||++++++....+.+.+ ++.+++.
T Consensus 235 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~ 312 (524)
T PRK06188 235 TVIVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQY 312 (524)
T ss_pred EEEEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-Cchhhhe
Confidence 999987 46788999999999999999999999999987666666789999999999999999877776665 4679999
Q ss_pred ccccccccccccCCcC-----CcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccc
Q 004952 504 CGGTELSSAYIQGSLL-----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNAD 573 (722)
Q Consensus 504 YG~TE~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~ 573 (722)
||+||++.++...... ......++|+|++++.++|+|++++++|.|+. ||+++. .||++ ++.
T Consensus 313 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~ 384 (524)
T PRK06188 313 YGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEV--GEICVRGPLVMDGYWN------RPE 384 (524)
T ss_pred eCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCe--eEEEEECcchhhhhcC------ChH
Confidence 9999997554433221 22345689999999999999999999999985 999994 45544 334
Q ss_pred ccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCc
Q 004952 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (722)
Q Consensus 574 ~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~ 653 (722)
.+...|. ..||+|||++++++||.++++||.|++||++|.+|+|.+||++|. .||+|.+++|++.+++..+
T Consensus 385 ~~~~~~~-------~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~- 455 (524)
T PRK06188 385 ETAEAFR-------DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLA-EHPAVAQVAVIGVPDEKWG- 455 (524)
T ss_pred Hhhhhhc-------CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCcC-
Confidence 4444442 129999999999999999999999999999999999999999995 9999999999999988777
Q ss_pred eEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+.++++++++++...+.++++++++++++.++.| .++++++||+|++||++|++|++.+.+
T Consensus 456 ~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 456 EAVTAVVVLRPGAAVDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWE 517 (524)
T ss_pred ceEEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHh
Confidence 8999999998766667789999999999999999 566999999999999999999999844
No 85
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.8e-62 Score=551.16 Aligned_cols=493 Identities=23% Similarity=0.282 Sum_probs=398.6
Q ss_pred cchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 004952 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (722)
Q Consensus 173 ~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~l 251 (722)
+|.+++.+.... ++.+||++|++..+. .+||.||.++++++|++|.+. +++|++|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~-~~~~p~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNV-VEGRGGKTAFIDDIS--------SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHH-hcccCCceEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 567777777542 367999999998766 999999999999999999999 9999999999999999999999
Q ss_pred HHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc-EEEEcCCCCCCCCCCCCCCC
Q 004952 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDL 330 (722)
Q Consensus 252 A~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 330 (722)
||+++|++++|+++.++.+++.++++.++++++++++... +.+.......+.. .++..... .....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 140 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPHLEHRVVVGRP-------EAGEV 140 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH------HHHHHHHhcCCCccEEEEeCCC-------Ccccc
Confidence 9999999999999999999999999999999999987432 2222222222221 11111110 01223
Q ss_pred CHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHH-hhhhcCCCCCCEEEEecCcccc
Q 004952 331 SWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE-GWAHIDLKVGDVYCWPTNLGWV 409 (722)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~ 409 (722)
.+.++...... ...+....++++++++|||||||.||||+++|+++...+.. ....++++++|+++...|++|+
T Consensus 141 ~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~ 215 (508)
T TIGR02262 141 QLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFA 215 (508)
T ss_pred cHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHH
Confidence 44444332221 11223345789999999999999999999999999876654 3456789999999999999999
Q ss_pred chh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchH
Q 004952 410 MGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDD 488 (722)
Q Consensus 410 ~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~ 488 (722)
.++ ..++.++..|+++++.++..++..+++.|+++++|++.++|+++..++...........++|.+++||+++++++.
T Consensus 216 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~ 295 (508)
T TIGR02262 216 YGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVG 295 (508)
T ss_pred HHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHH
Confidence 988 4577889999999998876788899999999999999999999998876544333456799999999999999998
Q ss_pred HHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccC
Q 004952 489 LWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYL 563 (722)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~ 563 (722)
+.|.+.+ ++++++.||+||++.+...... .....+++|+|++++.++|+|++++++|.|+. |||++. .+|+
T Consensus 296 ~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~--Gel~i~~~~~~~gY~ 371 (508)
T TIGR02262 296 QRWQARF-GVDIVDGIGSTEMLHIFLSNLP-GDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEP--GELLISGPSSATMYW 371 (508)
T ss_pred HHHHHHh-CCchhhCccccccCceeecCCc-cCCCCCCcCCCCCCcEEEEECCCCCCCCCCCe--eEEEEecCccccccC
Confidence 8888766 5789999999999865443322 22345689999999999999999999999985 999994 3444
Q ss_pred CCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEE
Q 004952 564 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (722)
Q Consensus 564 ~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~v 643 (722)
+ +++.++..|. .+||+|||++++++||.++++||.||+||++|.+|+|.|||+.|. .||+|.++++
T Consensus 372 ~------~~~~~~~~~~-------~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~-~~~~v~~~~~ 437 (508)
T TIGR02262 372 N------NRAKTRDTFQ-------GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALI-QHPAVLEAAV 437 (508)
T ss_pred C------CHHHhHhhhh-------cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHH-hCCCeeEEEE
Confidence 3 4555555553 139999999999999999999999999999999999999999995 9999999999
Q ss_pred EeecCCCCCceEEEEEEEecCCCC---CCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHH
Q 004952 644 ISVSPAGGGPEVLVIFVVLKKGFT---SQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQ 711 (722)
Q Consensus 644 v~~~~~~~g~~~l~a~vv~~~~~~---~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~ 711 (722)
++.++...+ +++++|+++.++.. ...++++++++++|+.++.|. +..+++||+|++||++|+.|+++
T Consensus 438 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 438 VGVEDEDGL-IKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EeccccCCC-ceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 998877666 78899998876542 235789999999999999995 55899999999999999998753
No 86
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-62 Score=558.14 Aligned_cols=499 Identities=22% Similarity=0.277 Sum_probs=386.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||+||.++++++|++|.+. +++||+|++++++++++++++|||+++|++++|++
T Consensus 34 a~~~p~~~a~~~~~~--------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~ 105 (563)
T PRK06710 34 ASRYPEKKALHFLGK--------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTN 105 (563)
T ss_pred HHHCCCceEEEecCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccC
Confidence 368999999998776 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCC------------------CCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI------------------PLR 326 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~ 326 (722)
|.++.+++.++++.++++++++++...... ..+........+++......... ...
T Consensus 106 p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 106 PLYTERELEYQLHDSGAKVILCLDLVFPRV------TNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cccCHHHHHHHHhccCCeEEEEeccchhhh------hccchhhccceeEEeccccccccccccccchhhccccccccccc
Confidence 999999999999999999999987432111 11111111111111100000000 000
Q ss_pred -CC-CCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh-hcCCCC-CCEEEE
Q 004952 327 -EQ-DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKV-GDVYCW 402 (722)
Q Consensus 327 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~-~~~~~~-~d~~l~ 402 (722)
.. ...|..+..... .........+++++|++|||||||.||||+++|+++......... .++... ++++++
T Consensus 180 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 180 ESETIHLWNSVEKEVN-----TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred ccchhhhhhhhhhccc-----cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 00 001111111000 001111224578999999999999999999999998755433222 234444 457888
Q ss_pred ecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecC
Q 004952 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (722)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge 481 (722)
..|+.|.++. ..++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|+........++++||.+++||+
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~ 333 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSA 333 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCC
Confidence 8999988887 34567899999999976 467789999999999999999999999998765555556789999999999
Q ss_pred CCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEec
Q 004952 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFP 560 (722)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~~ 560 (722)
++++++..++.+.+ +++++|.||+||++..............+++|+|++++.++|+| ++++++|.|+. |||++..
T Consensus 334 ~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~--Gel~v~g 410 (563)
T PRK06710 334 PLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEI--GEIVVKG 410 (563)
T ss_pred cCCHHHHHHHHHhh-CCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCCc--eEEEEec
Confidence 99999988887655 67899999999998654333222333456899999999999998 67899999985 9999932
Q ss_pred ccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcce
Q 004952 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE 640 (722)
Q Consensus 561 ~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~ 640 (722)
..+. ..|+.+++.+...|. ..||+|||++++++||.++++||.||+||++|.+|+|.|||++|. +||.|.+
T Consensus 411 ~~~~-~gY~~~~~~~~~~~~-------~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~-~~~~v~~ 481 (563)
T PRK06710 411 PQIM-KGYWNKPEETAAVLQ-------DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLY-EHEKVQE 481 (563)
T ss_pred Cccc-hhhhCChHHHhhhcc-------cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHH-hCcceee
Confidence 2111 112224556665553 139999999999999999999999999999999999999999995 9999999
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhh
Q 004952 641 TAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELS 717 (722)
Q Consensus 641 ~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 717 (722)
++|++.+++..| +.++++++..++...+.++++++++++|+.++.|. +.++++||+|++||++|+.|++++..+-+
T Consensus 482 ~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~ 558 (563)
T PRK06710 482 VVTIGVPDPYRG-ETVKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNE 558 (563)
T ss_pred EEEEccccCCcC-ceeEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCc
Confidence 999999988777 88999999888766778899999999999999995 55899999999999999999998876543
No 87
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.7e-62 Score=553.38 Aligned_cols=488 Identities=22% Similarity=0.226 Sum_probs=384.7
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||.||+++++++|.+|.+. +++||+|++++++++++++++|||+++|++++|++
T Consensus 31 ~~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 102 (541)
T TIGR03205 31 AADYGPRPALEFRDR--------PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLS 102 (541)
T ss_pred HHHcCCCceEEECCc--------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 368999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc-CCCcEEEEcCCCC-CC-----CCCCCCCCCCHHHHhc
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-APLKAIVLPAIGN-DV-----GIPLREQDLSWKDFLS 337 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~ 337 (722)
|.++.+++.+++++++++.+++++.. ...+........ .....+++..... .. .........++.+++.
T Consensus 103 ~~~~~~~l~~~i~~~~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 103 PLDGERALSHKLSDSGARLLITSDLA----ALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred CCCCHHHHHHHHhhcCceEEEEeCch----hhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 99999999999999999999997531 011111111111 1112222221100 00 0011123345666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh-----hcCCCCCCEEEEecCccccchh
Q 004952 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-----HIDLKVGDVYCWPTNLGWVMGP 412 (722)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~ 412 (722)
.... ........++++++++|||||||.||||+++|+++.+....... .......+++++..|+.|..+.
T Consensus 179 ~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~ 253 (541)
T TIGR03205 179 GAAA-----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYAL 253 (541)
T ss_pred cCCC-----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHH
Confidence 3221 11122345789999999999999999999999998765442211 1122345789999999998876
Q ss_pred -HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHH
Q 004952 413 -VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (722)
Q Consensus 413 -~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~ 491 (722)
..++.++..|+++++.. ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++
T Consensus 254 ~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 254 TVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 45778899999988875 5678999999999999999999999999987544445567899999999999999998888
Q ss_pred HhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEE--CCCCCcCCCCCCccceEEEe-----cccCC
Q 004952 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECGVPYPDDQPCVGEVGLF-----PLYLG 564 (722)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vl--d~~~~~~p~G~~giGel~v~-----~~y~~ 564 (722)
.+.+ +.++++.||+||++..++..........+++|.|++++.++|+ |+.+++++.|+. |||++. .||++
T Consensus 333 ~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 333 ERKT-GLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV--GELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHh-CCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCCe--eEEEEecCCccccccC
Confidence 7654 5789999999999876554433333445789999999998875 677899999985 999984 24444
Q ss_pred CccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEE
Q 004952 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (722)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv 644 (722)
+++.+++.|.. + ||+|||++++++||+++++||.||+||++|+||+|.|||+.+. +||+|.+++|+
T Consensus 410 ------~~~~~~~~~~~-----~--~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~ 475 (541)
T TIGR03205 410 ------RPEESAEAFVG-----D--RFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIY-EHPGVQEVIVI 475 (541)
T ss_pred ------ChhhhHhhhcc-----C--CcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHH-hCCCeeeEEEE
Confidence 44566666642 2 8999999999999999999999999999999999999999995 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHH
Q 004952 645 SVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 645 ~~~~~~~g~~~l~a~vv~~~~~~-~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+++++..+ +.+++++++.++.. .+.++++++++++|+.|++|. ++++++||+|++||++|++|+
T Consensus 476 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 476 GIPDQYRG-EAAKAFVKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred ecCCcccC-ceEEEEEEECCCCCcCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 99988777 88999999887542 567899999999999999994 558999999999999999874
No 88
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-62 Score=553.66 Aligned_cols=497 Identities=20% Similarity=0.213 Sum_probs=390.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|++..+. ++||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~p~~~a~~~~~~--------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~ 91 (540)
T PRK06164 20 ARARPDAVALIDEDR--------PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVN 91 (540)
T ss_pred HHhCCCCeEEecCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecC
Confidence 468999999996555 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc----CC--CcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----AP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
+..+.+++.++++++++++++++++.. .++....+... .+ ...+++....... . ......+.+....
T Consensus 92 ~~~~~~~l~~~i~~~~~~~ii~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 164 (540)
T PRK06164 92 TRYRSHEVAHILGRGRARWLVVWPGFK----GIDFAAILAAVPPDALPPLRAIAVVDDAADAT--P-APAPGARVQLFAL 164 (540)
T ss_pred CCCCcHHHHHHHHhcCccEEEEccccc----cccHHHHhhcccccccCCcceEEEeccCcccC--C-CCCcccccccccc
Confidence 999999999999999999999987542 11111111111 01 1222222110000 0 0000111111111
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (722)
.... ...........++++++++|||||||.||||+++|+++.+.+......+++.+++++++..|++|.+++..++.+
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 243 (540)
T PRK06164 165 PDPA-PPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGA 243 (540)
T ss_pred cccC-CcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHH
Confidence 0000 000001122346889999999999999999999999999988888888899999999999999999999889999
Q ss_pred hhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeec-CCCCcchHHHHHhhccC
Q 004952 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG-ETSNVDDDLWLSSKAWY 497 (722)
Q Consensus 419 L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~G-e~l~~~~~~~~~~~~~~ 497 (722)
+..|+++++.+ ..++..+++.|+++++|+++++|+++..|.+.. ....++++++.+.++| .....+...++... +
T Consensus 244 l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~ 319 (540)
T PRK06164 244 LAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--G 319 (540)
T ss_pred HhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--C
Confidence 99999999876 567789999999999999999999999998862 3455688999887776 44445556666544 6
Q ss_pred CcccccccccccccccccCCcCC--cCccccccccC-CCceEEEEC-CCCCcCCCCCCccceEEEe-----cccCCCccc
Q 004952 498 NAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTAT-MTAGLVILD-ECGVPYPDDQPCVGEVGLF-----PLYLGASDR 568 (722)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~-~~~~~~vld-~~~~~~p~G~~giGel~v~-----~~y~~~~~~ 568 (722)
+++++.||+||++.+++...... .......|.|+ +++.++|+| +++++++.|+. |||++. .||++
T Consensus 320 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~gY~~---- 393 (540)
T PRK06164 320 VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGES--GEIEIRAPSLMRGYLD---- 393 (540)
T ss_pred CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCe--eEEEEecccccccccC----
Confidence 78999999999987554443322 12234567776 799999999 57899999985 999993 35554
Q ss_pred cccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecC
Q 004952 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (722)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~ 648 (722)
+++.|+..|..+ .||+|||+|++++||.+++.||.||+||++|++|+|.|||++|. +||+|.+++|++++.
T Consensus 394 --~~~~t~~~~~~~------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~-~~~~v~~~~v~~~~~ 464 (540)
T PRK06164 394 --NPDATARALTDD------GYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALE-ALPGVAAAQVVGATR 464 (540)
T ss_pred --CchhhhhcccCC------CceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHH-hCCCceeEEEEecCC
Confidence 566777776542 39999999999999999999999999999999999999999995 999999999999884
Q ss_pred CCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCc---hhhHHHHHHHHhhhhhhc
Q 004952 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASN---KLLRRVLRDQIKHELSVR 719 (722)
Q Consensus 649 ~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~G---KvdR~~L~~~~~~~~~~~ 719 (722)
. ++ ..+++++++.++...+.++++++++++||.+++| .+++++++|+|++| |++|+.|++++++..+++
T Consensus 465 ~-~~-~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~~ 537 (540)
T PRK06164 465 D-GK-TVPVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAAE 537 (540)
T ss_pred C-Cc-eeEEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhhh
Confidence 3 34 7899999998776677899999999999999999 56699999999999 999999999877765543
No 89
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-62 Score=555.02 Aligned_cols=490 Identities=23% Similarity=0.258 Sum_probs=387.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||+||+++++++|.+|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 33 FRQYADRPAFICMGK--------AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVN 104 (557)
T ss_pred HHHcCCCceEEEcCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccC
Confidence 368999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcC-CCCC-----------------CCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPA-IGND-----------------VGIPLR 326 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~ 326 (722)
|.++.+++.+++++++++++++++... +....+........+.+.. .... ......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (557)
T PRK07059 105 PLYTPRELEHQLKDSGAEAIVVLENFA------TTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSL 178 (557)
T ss_pred cccCHHHHHHHHHccCceEEEEchhhH------HHHHHhhcccCCceeEEecccccccccccccccccccccccccccCC
Confidence 999999999999999999999987432 1111111111111111110 0000 000011
Q ss_pred CCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhh----cCCC---CCCE
Q 004952 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLK---VGDV 399 (722)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~----~~~~---~~d~ 399 (722)
++...+.+.+..... .........++++|+++|||||||.||||+++|++++..+...... +... ....
T Consensus 179 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 179 PGHVRFNDALAEGAR----QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred CCcccHHHHhhccCC----CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 223445555443221 1112234567899999999999999999999999987655432211 1111 2346
Q ss_pred EEEecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEe
Q 004952 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (722)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~ 478 (722)
++...|+.|.++. ...+.++..|++.++.+...++..+++.++++++|.+.++|+++..|.........+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 7778888887775 456678889999888775557788999999999999999999999998876555667889999999
Q ss_pred ecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE
Q 004952 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (722)
Q Consensus 479 ~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (722)
||+++++.+.+++.+.+ ++++++.||+||++.++............++|+|++++.++|+|++++++|.|+. |||++
T Consensus 335 gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~--Gel~v 411 (557)
T PRK07059 335 GGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEP--GEICI 411 (557)
T ss_pred ccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCCc--eEEEE
Confidence 99999999888877664 6899999999999876544433222345789999999999999999999999995 99999
Q ss_pred e-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhc
Q 004952 559 F-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (722)
Q Consensus 559 ~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (722)
. .||++ +++.+...|..+ .||+|||+|++++||.++++||+||+||++|++|+|.|||++|.
T Consensus 412 ~g~~~~~gY~~------~~~~~~~~~~~~------g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~- 478 (557)
T PRK07059 412 RGPQVMAGYWN------RPDETAKVMTAD------GFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVA- 478 (557)
T ss_pred eCCccchhhhc------CHHHHhhhcccC------CceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHH-
Confidence 4 34444 455565555432 29999999999999999999999999999999999999999995
Q ss_pred cCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHH
Q 004952 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQ 711 (722)
Q Consensus 634 ~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~ 711 (722)
.||+|.+++|+++++...| +.++++++..+. ..+.++++++++++|+.++.|. +.++++||+|++||++|+.|+++
T Consensus 479 ~~~~V~~~~v~~~~~~~~g-e~~~~~v~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 479 SHPGVLEVAAVGVPDEHSG-EAVKLFVVKKDP-ALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred hCCceeEEEEEecccCCCC-eeEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 9999999999999988777 889999887653 4566899999999999999995 44899999999999999999864
No 90
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-62 Score=554.05 Aligned_cols=513 Identities=20% Similarity=0.223 Sum_probs=396.9
Q ss_pred CcCCCCccchhhhcccCcccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004952 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (722)
Q Consensus 166 ~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~ 244 (722)
-|++....+..+.+ ..+ ++.+|+++|+.+.+. .+||+||+++++++|.+|.+. +++||+|+++++|++
T Consensus 26 ~~~~~~~~~l~~~l-~~~--a~~~p~~~al~~~~~--------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~ 94 (567)
T PRK06178 26 PEYPHGERPLTEYL-RAW--ARERPQRPAIIFYGH--------VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCP 94 (567)
T ss_pred CCCCcCcccHHHHH-HHH--HHHCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc
Confidence 35555544444332 222 357899999998776 999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCC-C--
Q 004952 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND-V-- 321 (722)
Q Consensus 245 ~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 321 (722)
++++++|||+++|++++|++|.++..++.+++++++++++++++... +.+..+........+++...... .
T Consensus 95 ~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~------~~l~~~~~~~~~~~i~~~~~~~~~~~~ 168 (567)
T PRK06178 95 QFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA------PVVEQVRAETSLRHVIVTSLADVLPAE 168 (567)
T ss_pred HHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHhhccCCcceEEEeccccccccc
Confidence 99999999999999999999999999999999999999999987532 22222222222222222111000 0
Q ss_pred -CCCCCC-------CCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh-hc
Q 004952 322 -GIPLRE-------QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HI 392 (722)
Q Consensus 322 -~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~-~~ 392 (722)
...... ....+.++.+.... ...........++++|+++|||||||.||||+++|++++........ ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~ 246 (567)
T PRK06178 169 PTLPLPDSLRAPRLAAAGAIDLLPALRA--CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAV 246 (567)
T ss_pred cccccccccccccccccccccHHHHhhc--cccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhc
Confidence 000000 00112222221111 01111123345799999999999999999999999998876554433 35
Q ss_pred CCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCcc
Q 004952 393 DLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT 471 (722)
Q Consensus 393 ~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~ 471 (722)
.+.++++++...|+.|..+. ..++.++.+|+++++.+ ..++..++..|+++++|.+.++|..+..+.........+++
T Consensus 247 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~ 325 (567)
T PRK06178 247 VGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLS 325 (567)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcc
Confidence 67889999999999999887 56888999999999987 56788999999999999999999999999876544555678
Q ss_pred ceeEEEe--ecCCCCcchHHHHHhhccCCcccccccccccccccccCCc--CC----cCccccccccCCCceEEEEC-CC
Q 004952 472 KIRSFAS--TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQ----PQAFGAFSTATMTAGLVILD-EC 542 (722)
Q Consensus 472 ~Lr~i~~--~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~----~~~~~~iG~p~~~~~~~vld-~~ 542 (722)
+++.+.. .|+.++++..+.+...++...+.+.||+||++.++..... .. ...++++|+|++|++++|+| ++
T Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~ 405 (567)
T PRK06178 326 SLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFET 405 (567)
T ss_pred hheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCC
Confidence 8888654 4589999988888876654344568999998754333221 11 12346799999999999999 67
Q ss_pred CCcCCCCCCccceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeec
Q 004952 543 GVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL 617 (722)
Q Consensus 543 ~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~ 617 (722)
++++|.|+. |||++. .||++ +++.++..|. +| ||+|||+|++++||+++++||+||+||+
T Consensus 406 ~~~~~~g~~--Gel~v~g~~v~~gY~~------~~~~~~~~~~-----dg--~~~TGDl~~~~~~g~l~i~GR~~d~i~~ 470 (567)
T PRK06178 406 GELLPLGAE--GEIVVRTPSLLKGYWN------KPEATAEALR-----DG--WLHTGDIGKIDEQGFLHYLGRRKEMLKV 470 (567)
T ss_pred CCcCCCCCc--eEEEEECCcccccccC------Chhhhhhccc-----CC--ceeecceEEEecCCeEEEEecccccEEE
Confidence 999999985 999983 34444 4555655553 23 9999999999999999999999999999
Q ss_pred CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCCeeecCCCCC
Q 004952 618 GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVVPEFPR 697 (722)
Q Consensus 618 ~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~v~~lP~ 697 (722)
+|++|+|.|||++|. .+|+|.+++|++.+++..| +.++++|+++++...+.++++++++++++.+++|.+.++++||+
T Consensus 471 ~G~~i~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~i~~v~~iP~ 548 (567)
T PRK06178 471 NGMSVFPSEVEALLG-QHPAVLGSAVVGRPDPDKG-QVPVAFVQLKPGADLTAAALQAWCRENMAVYKVPEIRIVDALPM 548 (567)
T ss_pred CCEEECHHHHHHHHH-hCCCeeEEEEEcCcCcccC-cceEEEEEeCCCCcCCHHHHHHHHHhcCcccCCceEEEeccCCC
Confidence 999999999999995 9999999999999888777 88999999987766778899999999999999998668999999
Q ss_pred CCCchhhHHHHHHHHhhh
Q 004952 698 TASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 698 t~~GKvdR~~L~~~~~~~ 715 (722)
|++||++|+.|++++++.
T Consensus 549 t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 549 TATGKVRKQDLQALAEEL 566 (567)
T ss_pred CCccceeHHHHHHHHHhh
Confidence 999999999999988753
No 91
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=5.7e-62 Score=548.42 Aligned_cols=474 Identities=19% Similarity=0.214 Sum_probs=390.9
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+.+|+++|+.+.+. .+||+||.++++++|..|.+. +++|++|+++++++.++++++|||+++|++++|+++
T Consensus 13 ~~~p~~~~~~~~~~--------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~ 84 (503)
T PRK04813 13 QTQPDFPAYDYLGE--------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDV 84 (503)
T ss_pred HhCCCceEEEeCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCC
Confidence 57899999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (722)
.++.+++.++++.++++++++++...... ... ..+.++++...... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~----------------~~~~~~~~~~~~~~--~~ 132 (503)
T PRK04813 85 SSPAERIEMIIEVAKPSLIIATEELPLEI--------------LGI----------------PVITLDELKDIFAT--GN 132 (503)
T ss_pred CChHHHHHHHHHhcCCCEEEecccccccc--------------cCC----------------cEEehHHhhhhhhc--cc
Confidence 99999999999999999999987431000 000 00111111111000 00
Q ss_pred CCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEE
Q 004952 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (722)
Q Consensus 346 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~l 425 (722)
.........++++++++|||||||.||||.++|+++...+.+....+++..+++++...|++|+.+.+.++.+|..|+++
T Consensus 133 ~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~ 212 (503)
T PRK04813 133 PYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTL 212 (503)
T ss_pred cccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEE
Confidence 01112234678899999999999999999999999998888888888999999999999999999998889999999999
Q ss_pred EEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccc
Q 004952 426 ALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (722)
Q Consensus 426 v~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~ 503 (722)
++.+.. .++..+++.++++++|++.++|++++.+.........+++++|.++++|+++++.+.+++.+.++++++++.
T Consensus 213 v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~ 292 (503)
T PRK04813 213 VALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNT 292 (503)
T ss_pred EEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeC
Confidence 998753 367789999999999999999999988766544445568899999999999999999999998888899999
Q ss_pred ccccccccccccCCc----CCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccccccc
Q 004952 504 CGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADH 574 (722)
Q Consensus 504 YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~ 574 (722)
||+||++..++.... .......++|+|.++++++|+|++|.++|.|+. ||+++. .||++ +++.
T Consensus 293 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~ 364 (503)
T PRK04813 293 YGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQ--GEIVISGPSVSKGYLN------NPEK 364 (503)
T ss_pred cccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCc--eEEEEeccccccccCC------ChhH
Confidence 999999764433211 112344579999999999999999999999985 999983 45655 4445
Q ss_pred cccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCce
Q 004952 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (722)
Q Consensus 575 t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~ 654 (722)
+...|..+ .|.+||+|||+|++ .||++++.||.||+||++|.+|+|.|||+.|. .||+|.+++|++.++...+ +
T Consensus 365 ~~~~~~~~---~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~ 438 (503)
T PRK04813 365 TAEAFFTF---DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLR-QSSYVESAVVVPYNKDHKV-Q 438 (503)
T ss_pred hHHhhccC---CCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHH-hCCCcceEEEEEeeCCCCc-c
Confidence 55555432 35579999999999 99999999999999999999999999999995 9999999999998776655 8
Q ss_pred EEEEEEEecCCCCC-C---HHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 655 VLVIFVVLKKGFTS-Q---PDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 655 ~l~a~vv~~~~~~~-~---~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
.+++++++.++... . .++++++++++++.+++| .++++++||+|+|||++|++|++.+++
T Consensus 439 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 439 YLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred EEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 89999998764211 1 146899999999999999 555899999999999999999998753
No 92
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.4e-62 Score=539.34 Aligned_cols=428 Identities=15% Similarity=0.118 Sum_probs=348.0
Q ss_pred eecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEe
Q 004952 209 LMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~~L~~~-v-~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~ 286 (722)
-+.|+||+++++++|++|++. + ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 478999999999999999999 7 67999999999999999999999999999999999999999999999999999998
Q ss_pred ccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCC
Q 004952 287 QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366 (722)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSG 366 (722)
++.... . . . .. ... ......++++++++||||
T Consensus 99 ~~~~~~------~---~----------~-------------~~---------~~~-------~~~~~~~~~~~~i~~TSG 130 (452)
T PRK07445 99 LDQLKL------S---H----------P-------------PP---------LPS-------QGILPNLETGWIMIPTGG 130 (452)
T ss_pred cCcccc------c---c----------C-------------CC---------CCc-------cccCCCCCCcEEEEeCCC
Confidence 764210 0 0 0 00 000 001124589999999999
Q ss_pred CCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCC
Q 004952 367 TTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGV 446 (722)
Q Consensus 367 STG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~v 446 (722)
|||.||||++||+++...+.+....+++.+ +++++..|++|.+++..++.+|+.|+++++.+.. ..........++++
T Consensus 131 TTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~ 208 (452)
T PRK07445 131 SSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCc
Confidence 999999999999999888877666677755 4678889999999998888999999999998632 11222344457899
Q ss_pred cEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCC-cCccc
Q 004952 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFG 525 (722)
Q Consensus 447 t~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~ 525 (722)
|++.++|++++.+++.. ...+++||.+++||+++++++.+.+... +++++|.||+||++..+....+.. .....
T Consensus 209 t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~ 283 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNN 283 (452)
T ss_pred eEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCC
Confidence 99999999999998632 3347899999999999999988776542 678999999999976443332211 12346
Q ss_pred cccccCCCceEEEECCCCCcCCCCCCccceEEEe-cccCCCccccccccccccceeccccCCCceecccCceEEEecCCc
Q 004952 526 AFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGY 604 (722)
Q Consensus 526 ~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~ 604 (722)
++|+|+++++++|+ .|+ +|||++. +....+ |++. +. ...+||+|||+|++|+||+
T Consensus 284 ~~G~~~p~~~v~i~--------~g~--~Gel~v~g~~~~~g---Y~~~----------~~-~~~g~~~TGDl~~~d~dG~ 339 (452)
T PRK07445 284 SSGQVLPHAQITIP--------ANQ--TGNITIQAQSLALG---YYPQ----------IL-DSQGIFETDDLGYLDAQGY 339 (452)
T ss_pred cCCccCCCCeEEEc--------CCC--cceEEEeCCccchh---hcCC----------cc-CCCCEEECCCEEEEcCCCC
Confidence 79999999999998 355 3999983 322211 1111 10 1234999999999999999
Q ss_pred EEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhh
Q 004952 605 IIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK 684 (722)
Q Consensus 605 l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~ 684 (722)
++|.||.||+||++|+||+|.|||++|. +||+|.+|+|++.+++..| +.++|+++.+++ ..+.++++++++++|+.|
T Consensus 340 l~~~GR~dd~I~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~~~~~~g-~~~~a~vv~~~~-~~~~~~l~~~~~~~L~~~ 416 (452)
T PRK07445 340 LHILGRNSQKIITGGENVYPAEVEAAIL-ATGLVQDVCVLGLPDPHWG-EVVTAIYVPKDP-SISLEELKTAIKDQLSPF 416 (452)
T ss_pred EEEEeecCCEEEECCEEECHHHHHHHHH-hCCCcceEEEEeccCcCCC-cEEEEEEEeCCC-CCCHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999995 9999999999999998877 889999998765 456789999999999999
Q ss_pred cCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 685 LNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 685 ~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
++|. ++++++||+|++||++|++|++++++++..
T Consensus 417 ~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 451 (452)
T PRK07445 417 KQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRLGL 451 (452)
T ss_pred cCCeEEEEecCCCCCCCcccCHHHHHHHHHHhhCC
Confidence 9995 558999999999999999999999988753
No 93
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-62 Score=547.70 Aligned_cols=465 Identities=18% Similarity=0.187 Sum_probs=374.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+||++|+++.+. .+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 45 a~~~p~~~a~~~~~~--------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~ 116 (516)
T PRK13383 45 AARWPGRTAIIDDDG--------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPIS 116 (516)
T ss_pred HHHCCCCcEEEeCCC--------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcC
Confidence 468999999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
+.++.+++.+++++++++++++++.... .+. ........+... . ... ...
T Consensus 117 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~-~~~~~~~~~~~~-----------~---~~~-~~~----- 166 (516)
T PRK13383 117 TEFRSDALAAALRAHHISTVVADNEFAE---------RIA-GADDAVAVIDPA-----------T---AGA-EES----- 166 (516)
T ss_pred ccCCHHHHHHHHhcCCCCEEEEchhHHH---------HHH-hhhcceEEeccc-----------h---hhh-hcC-----
Confidence 9999999999999999999999875421 111 111112222100 0 000 000
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHH--HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcC
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR--CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G 422 (722)
...+...++.++++|||||||.||||+++|+.... ........+++.++++++...|++|.+++..++.++..|
T Consensus 167 ----~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G 242 (516)
T PRK13383 167 ----GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALG 242 (516)
T ss_pred ----CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcC
Confidence 00111235678999999999999999999984322 112223456788999999999999999998888899999
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhccCCcc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l 500 (722)
+++++.. ..++..+++.++++++|.+.++|+++..|...... ...+++++|.+++||+++++++.+++.+.+ +.++
T Consensus 243 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v 320 (516)
T PRK13383 243 GTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDIL 320 (516)
T ss_pred CEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchh
Confidence 9998865 56788999999999999999999999999865321 234578999999999999999999888776 5789
Q ss_pred cccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCcccccccccccccee
Q 004952 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFR 580 (722)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~ 580 (722)
++.||+||++..+...........+++|+|+++++++|+|+++++++.|+. |||++...... .+|.+... ..+
T Consensus 321 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~--~~Y~~~~~--~~~- 393 (516)
T PRK13383 321 YNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVT--GRIFVGGELAG--TRYTDGGG--KAV- 393 (516)
T ss_pred hhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCc--eEEEEecCccc--ccccCCch--hhe-
Confidence 999999999865443322223345789999999999999999999999985 99998422111 11222211 111
Q ss_pred ccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEE
Q 004952 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (722)
Q Consensus 581 ~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~v 660 (722)
.. .||+|||+|+++++|++++.||.||+||++|++|+|.|||.+|. +||+|.+++|++.++...+ +.++++|
T Consensus 394 ----~~--g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~~~v 465 (516)
T PRK13383 394 ----VD--GMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALA-AHPAVADNAVIGVPDERFG-HRLAAFV 465 (516)
T ss_pred ----ec--CceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-ceEEEEE
Confidence 12 39999999999999999999999999999999999999999995 9999999999999988777 8899999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHH
Q 004952 661 VLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+++++...+.++++++++++++.++.|. ++++++||+|++||++|++|+
T Consensus 466 ~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 466 VLHPGSGVDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EECCCCCCCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 9887666677899999999999999994 558999999999999999985
No 94
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.7e-61 Score=551.16 Aligned_cols=500 Identities=20% Similarity=0.243 Sum_probs=385.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++.+|+++|+++.+. .+||+||+++++++|..|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 30 ~~~~p~~~a~~~~~~--------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 30 AVVHPTRKSVVHGSV--------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVN 101 (567)
T ss_pred HhhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEec
Confidence 367899999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc---------CCCcEEEEcCCCCCC---CCCCCCCCCCH
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---------APLKAIVLPAIGNDV---GIPLREQDLSW 332 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~~~~ 332 (722)
|.++.+++.+++++++++++++++... +....+... .....+++....... ......+...|
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFF------TLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhh------hHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 999999999999999999999987542 111111111 011223332111000 00111234456
Q ss_pred HHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh
Q 004952 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (722)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (722)
.+++..... . .........+++++++|||||||.||||+++|+++..........+++.+++++++..|++|..+.
T Consensus 176 ~~~~~~~~~---~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 176 EKFLETGDP---E-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred HHHHhcccc---c-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhH
Confidence 666554221 0 000112234578889999999999999999999987666555567788899999999999998887
Q ss_pred HHHHH-HhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCC-CCccceeEEEeecCCCCcchHHH
Q 004952 413 VILFS-SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG-LDWTKIRSFASTGETSNVDDDLW 490 (722)
Q Consensus 413 ~~~~~-~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~-~~l~~Lr~i~~~Ge~l~~~~~~~ 490 (722)
...+. ++..|.++++ . ..++..+++.++++++|++.++|++++.|.+...... .++++++.++++|+++++.+.++
T Consensus 252 ~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~ 329 (567)
T PLN02479 252 CFTWTLAALCGTNICL-R-QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFA 329 (567)
T ss_pred HHHHHHHhhcCceEec-c-CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHH
Confidence 44443 4555555544 3 4678899999999999999999999999987643222 25789999999999999999888
Q ss_pred HHhhccCCcccccccccccccccccCCcC---------Cc-CccccccccCCCce-EEEEC-CCCCcCCCCCCccceEEE
Q 004952 491 LSSKAWYNAIIESCGGTELSSAYIQGSLL---------QP-QAFGAFSTATMTAG-LVILD-ECGVPYPDDQPCVGEVGL 558 (722)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---------~~-~~~~~iG~p~~~~~-~~vld-~~~~~~p~G~~giGel~v 558 (722)
+.+. +.++++.||+||+++.++..... .. ......|.+.++.. ++|+| +.++++|.+...+|||++
T Consensus 330 ~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 330 MSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 7654 57899999999986433221100 00 01135678888875 88999 568888764211599999
Q ss_pred e-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhc
Q 004952 559 F-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (722)
Q Consensus 559 ~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (722)
. +||++ +++.|++.|.. .||+|||+|+++++|+++|+||.||+||++|+||+|.|||++|.
T Consensus 408 ~g~~~~~GY~~------~~~~t~~~~~~-------g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~- 473 (567)
T PLN02479 408 RGNMVMKGYLK------NPKANEEAFAN-------GWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVY- 473 (567)
T ss_pred eccchhhhhhc------CcccccchhcC-------CceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHH-
Confidence 3 45555 55677777642 29999999999999999999999999999999999999999995
Q ss_pred cCCCcceeEEEeecCCCCCceEEEEEEEecCCCC-----CCHHHHHHHHHHHHHhhcCCCeeecCCCCCCCCchhhHHHH
Q 004952 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFT-----SQPDKLKMIFSKAIQSKLNPLFKVVPEFPRTASNKLLRRVL 708 (722)
Q Consensus 634 ~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~~~v~~lP~t~~GKvdR~~L 708 (722)
.||.|.+++|++.+++..+ +.+++++++.++.. ...++|+++++++||.|+.|..+.+++||+|++||++|+.|
T Consensus 474 ~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gKv~r~~L 552 (567)
T PLN02479 474 THPAVLEASVVARPDERWG-ESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVFGPLPKTATGKIQKHVL 552 (567)
T ss_pred hCcccceeeEEeccchhcC-ceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEeccCCCCCccCeeHHHH
Confidence 9999999999999887766 88999999876532 23468899999999999999777668899999999999999
Q ss_pred HHHHhh-hhhhcccC
Q 004952 709 RDQIKH-ELSVRSRI 722 (722)
Q Consensus 709 ~~~~~~-~~~~~~~~ 722 (722)
++.+.. .+.++|||
T Consensus 553 ~~~~~~~~~~~~~~~ 567 (567)
T PLN02479 553 RAKAKEMGPVKKSRL 567 (567)
T ss_pred HHHHHhhCCcccccC
Confidence 888766 67788876
No 95
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.9e-61 Score=539.08 Aligned_cols=485 Identities=20% Similarity=0.199 Sum_probs=382.6
Q ss_pred eEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHH
Q 004952 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAARE 271 (722)
Q Consensus 193 ~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~ 271 (722)
.|++.+++ .+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.++
T Consensus 3 ~~~~~~~~--------~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 74 (509)
T PRK12406 3 ATIISGDR--------RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE 74 (509)
T ss_pred eEEEECCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH
Confidence 36666555 999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcE--EEEcCCCC-------CCC-CCCCCCCCCHHHHhcccCC
Q 004952 272 IATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKA--IVLPAIGN-------DVG-IPLREQDLSWKDFLSSVDY 341 (722)
Q Consensus 272 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~ 341 (722)
+.++++++++++++++..... .+.+..+..+ +.+..... ... .........|++.......
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLLH---------GLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP 145 (509)
T ss_pred HHHHHhccCCcEEEEccchhh---------hhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCc
Confidence 999999999999999874321 1111111111 11110000 000 0112233456555432211
Q ss_pred CCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHH
Q 004952 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (722)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (722)
.....++++++++|||||||.||||+++|.+..+ ........+++.++++++...|+.|..+....+.+
T Consensus 146 --------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 217 (509)
T PRK12406 146 --------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRA 217 (509)
T ss_pred --------cCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHH
Confidence 1123468999999999999999999998765433 33334456788999999999999998887666778
Q ss_pred hhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHhhcc
Q 004952 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (722)
Q Consensus 419 L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~ 496 (722)
+..|+++++.+ ..++..+++.++++++|++.++|+++..|+.... ....++++||.+++||+++++++.+++.+.+
T Consensus 218 ~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~- 295 (509)
T PRK12406 218 GRLGGVLVLQP-RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW- 295 (509)
T ss_pred HhhheEEEEcc-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-
Confidence 89999999876 4678899999999999999999999999987543 2345678999999999999999998888765
Q ss_pred CCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccccccccc
Q 004952 497 YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEE 576 (722)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~ 576 (722)
++.+++.||+||++.+...........++++|+|++++.++|+|+++++++.|+. ||+++.........++.+++.++
T Consensus 296 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~~~y~~~~~~~~ 373 (509)
T PRK12406 296 GPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEI--GEIYSRIAGNPDFTYHNKPEKRA 373 (509)
T ss_pred CCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCc--eEEEEECCccccccccCCchhcc
Confidence 5789999999999875543332233445789999999999999999999999985 99999432111111222344444
Q ss_pred cceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEE
Q 004952 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (722)
Q Consensus 577 ~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l 656 (722)
..+. ..||+|||+|++++||.+++.||.||+||++|++|++.|||+.|. .+|+|.+++|++.++...+ +.+
T Consensus 374 ~~~~-------~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~ 444 (509)
T PRK12406 374 EIDR-------GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLH-AVPGVHDCAVFGIPDAEFG-EAL 444 (509)
T ss_pred cccC-------CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeeeccccC-cee
Confidence 3321 239999999999999999999999999999999999999999995 8999999999999887766 789
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 657 VIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 657 ~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
++++++.++...+.++++++++++|+.|++|. +.++++||+|++||++|++|++.+...
T Consensus 445 ~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 445 MAVVEPQPGATLDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 99999887656677999999999999999994 558999999999999999999877653
No 96
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8e-61 Score=545.61 Aligned_cols=495 Identities=21% Similarity=0.251 Sum_probs=386.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+++.+. .+||+||.++++++|.+|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 104 (560)
T PRK08974 33 VARYADQPAFINMGE--------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNV 104 (560)
T ss_pred HHhCCCCceEEECCc--------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEecc
Confidence 368999999998665 99999999999999999985 7 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCC-------------------C
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI-------------------P 324 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 324 (722)
+|.++.+++.+++++++++++++++... +....+........+.+......... .
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (560)
T PRK08974 105 NPLYTPRELEHQLNDSGAKAIVIVSNFA------HTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKY 178 (560)
T ss_pred CccCCHHHHHHHHHhcCceEEEEecccc------HHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccc
Confidence 9999999999999999999999976421 11222221111112111110000000 0
Q ss_pred CCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC---CCCCCEEE
Q 004952 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---LKVGDVYC 401 (722)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~---~~~~d~~l 401 (722)
..+...++.+..+.... .........++++++++|||||||.||||.++|+++...+......+. ...++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (560)
T PRK08974 179 HLPDAISFRSALHKGRR----MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVV 254 (560)
T ss_pred cCCCcccHHHHhhccCC----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEE
Confidence 00011122222221111 011112345789999999999999999999999999876654333222 23456778
Q ss_pred EecCccccchh-HHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeec
Q 004952 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (722)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~G 480 (722)
...++.|.++. ...+.++.+|+++++.....++..+++.++++++|++..+|++++.|.........++++||.+++||
T Consensus 255 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg 334 (560)
T PRK08974 255 TALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGG 334 (560)
T ss_pred EeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecC
Confidence 88888887775 45667788999988876555778899999999999999999999999876555556678999999999
Q ss_pred CCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-
Q 004952 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF- 559 (722)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~- 559 (722)
+++++.+.+++.+.+ ++++++.||+||++..+...........+++|.|++++.++|+|++++++|.|+. |||++.
T Consensus 335 ~~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~g 411 (560)
T PRK08974 335 MAVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEP--GELWVKG 411 (560)
T ss_pred ccCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCCc--eEEEEec
Confidence 999999888887654 6899999999999876554433333445789999999999999999999999995 999993
Q ss_pred ----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccC
Q 004952 560 ----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (722)
Q Consensus 560 ----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~ 635 (722)
.+|++ +++.++..|. . .||+|||+++++++|.++++||.||+||++|++|+|.+||++|. .|
T Consensus 412 ~~~~~gy~~------~~~~~~~~~~-----~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~-~~ 477 (560)
T PRK08974 412 PQVMLGYWQ------RPEATDEVIK-----D--GWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVM-LH 477 (560)
T ss_pred CCcchhhcC------Chhhhhhhhh-----c--CCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hC
Confidence 34443 4555665552 1 29999999999999999999999999999999999999999995 99
Q ss_pred CCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 636 p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
|+|.+++|++.++...+ +.++++++..+ ...+.++++++++++|+.++.|. +.++++||+|++||++|+.|++....
T Consensus 478 ~~v~~~~v~~~~~~~~g-~~~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~ 555 (560)
T PRK08974 478 PKVLEVAAVGVPSEVSG-EAVKIFVVKKD-PSLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARA 555 (560)
T ss_pred CCeeEEEEEeeecCCcc-eEEEEEEECCC-CCCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHh
Confidence 99999999999988777 77888887654 34556889999999999999994 55899999999999999999998776
Q ss_pred hhh
Q 004952 715 ELS 717 (722)
Q Consensus 715 ~~~ 717 (722)
+..
T Consensus 556 ~~~ 558 (560)
T PRK08974 556 KVD 558 (560)
T ss_pred hhc
Confidence 654
No 97
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-60 Score=540.25 Aligned_cols=496 Identities=21% Similarity=0.221 Sum_probs=381.4
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+.+|+++|+.+.+. .+||+||.++++++|++|.+. +++||+|++++++++++++++|||+++|++++|++|
T Consensus 29 ~~~~~~~a~~~~~~--------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~ 100 (545)
T PRK08162 29 EVYPDRPAVIHGDR--------RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNT 100 (545)
T ss_pred HHCCCCeEEEECCe--------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEecccc
Confidence 68899999998766 899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC-cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
.++.+++.+++++++++.++++.... +.........+. +.+++.............+..++.+++.....
T Consensus 101 ~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 171 (545)
T PRK08162 101 RLDAASIAFMLRHGEAKVLIVDTEFA------EVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP--- 171 (545)
T ss_pred ccChHHHHHHHHhCCCeEEEEccchh------hHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc---
Confidence 99999999999999999999987532 112222222222 13333322111000001123345555543221
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCE
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (722)
..........+++++++|||||||.||||+++|+++..........+++..++++++..|+.|..+....+...+.|++
T Consensus 172 -~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~ 250 (545)
T PRK08162 172 -DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAGT 250 (545)
T ss_pred -cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHccE
Confidence 0011112234679999999999999999999999976666555566778889999999999998887544444455666
Q ss_pred EEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
.++.. ..++..+++.|+++++|++.++|++++.|++........+.+++.++++|+.+++...+++... ++++++.|
T Consensus 251 ~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 327 (545)
T PRK08162 251 NVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVY 327 (545)
T ss_pred EEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeecc
Confidence 65554 4678899999999999999999999999987654333345567778899999998888877653 67899999
Q ss_pred cccccccccccCCcC------C----cCccccccccCC-CceEEEECC-CCCcCCCCCCccceEEEe-----cccCCCcc
Q 004952 505 GGTELSSAYIQGSLL------Q----PQAFGAFSTATM-TAGLVILDE-CGVPYPDDQPCVGEVGLF-----PLYLGASD 567 (722)
Q Consensus 505 G~TE~~~~~~~~~~~------~----~~~~~~iG~p~~-~~~~~vld~-~~~~~p~G~~giGel~v~-----~~y~~~~~ 567 (722)
|+||+++.+...... . .....+.|.+.+ +..++|+|+ .++++|.+...+|||++. .||++
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~--- 404 (545)
T PRK08162 328 GLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLK--- 404 (545)
T ss_pred cccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcC---
Confidence 999986433322110 0 111245566655 346889994 788887632115999993 35554
Q ss_pred ccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeec
Q 004952 568 RLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS 647 (722)
Q Consensus 568 ~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~ 647 (722)
+++.+...|.. .||+|||+|++++||.++|+||.||+||++|.||+|.|||++|. .||+|.+++|++.+
T Consensus 405 ---~~~~~~~~~~~-------g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~ 473 (545)
T PRK08162 405 ---NPKATEEAFAG-------GWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLY-RHPAVLVAAVVAKP 473 (545)
T ss_pred ---ChhhhHHHhhC-------CCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHH-hCCcccEEEEEeee
Confidence 55566666642 29999999999999999999999999999999999999999995 99999999999998
Q ss_pred CCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCCeeecCCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 648 PAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVVPEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 648 ~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
++..+ +.+++|++++++...+.+++++++++.|+.|++|..+.+++||+|+|||++|+.|++.+....++
T Consensus 474 ~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gK~~r~~l~~~~~~l~~~ 543 (545)
T PRK08162 474 DPKWG-EVPCAFVELKDGASATEEEIIAHCREHLAGFKVPKAVVFGELPKTSTGKIQKFVLREQAKSLKAI 543 (545)
T ss_pred ccccC-ceEEEEEEeCCCCCCCHHHHHHHHHHhcccccCCcEEEecccCCCCCcCCcHHHHHHHHhhhhhh
Confidence 87776 88999999888766678899999999999999997665678999999999999999987665544
No 98
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.1e-61 Score=554.79 Aligned_cols=489 Identities=15% Similarity=0.108 Sum_probs=372.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+..+++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 49 a~~~p~~~a~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 49 AQEAPDRVFLAERGA---DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVS 125 (614)
T ss_pred HHHCCCCceeeeccC---CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeec
Confidence 368999999987532 12245899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-----HHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhccc
Q 004952 265 DSFA-----AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (722)
Q Consensus 265 p~~~-----~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (722)
|.++ .+++.+++++++++++|+++.... ........ ......++..... .......|.++....
T Consensus 126 ~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~-~~~~~~i~~~~~~------~~~~~~~~~~~~~~~ 194 (614)
T PRK08180 126 PAYSLVSQDFGKLRHVLELLTPGLVFADDGAAF----ARALAAVV-PADVEVVAVRGAV------PGRAATPFAALLATP 194 (614)
T ss_pred cccccccCCHHHHHHHHhcCCCcEEEEcCHHHH----HHHHhhhc-cCCceEEEecCCC------CCcccccHHHHhccc
Confidence 9998 799999999999999999753100 00000000 0111222221100 001134566665432
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCC--CCCEEEEecCccccchh-HHHH
Q 004952 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK--VGDVYCWPTNLGWVMGP-VILF 416 (722)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~-~~~~ 416 (722)
.. ...........++++++|+|||||||.||||++||+++...+......+++. .+++++++.|++|.++. +.++
T Consensus 195 ~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~ 272 (614)
T PRK08180 195 PT--AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLG 272 (614)
T ss_pred cc--cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHH
Confidence 11 0001111234579999999999999999999999999988877666666653 56899999999999887 5677
Q ss_pred HHhhcCCEEEEecCCCCh---hhHHHHHHHhCCcEEechhHHHHHHHhcCC----CCCCCccceeEEEeecCCCCcchHH
Q 004952 417 SSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDDDL 489 (722)
Q Consensus 417 ~~L~~G~~lv~~~~~~~~---~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~----~~~~~l~~Lr~i~~~Ge~l~~~~~~ 489 (722)
.+|++|+++++.+..+++ ..+++.++++++|+++++|+++..|++... ....++++||.+++||+++++++.+
T Consensus 273 ~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~ 352 (614)
T PRK08180 273 IVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWD 352 (614)
T ss_pred HHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHH
Confidence 899999999997644443 367888999999999999999999876421 1234578999999999999999988
Q ss_pred HHHhh----cc-CCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----
Q 004952 490 WLSSK----AW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF----- 559 (722)
Q Consensus 490 ~~~~~----~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~----- 559 (722)
++.+. ++ ++++++.||+||++..++.... .....+++|+|++|++++|+|++ . .|||++.
T Consensus 353 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~d~~-------~--~GEi~vrg~~v~ 422 (614)
T PRK08180 353 RLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGLPAPGCEVKLVPVG-------G--KLEVRVKGPNVT 422 (614)
T ss_pred HHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccCccCCcEEEEecCC-------C--CcEEEEecCccc
Confidence 87764 22 3679999999999865443322 23456799999999999999852 2 3899983
Q ss_pred cccCCCccccccccccccceeccccCCCceecccCceEEE----ecCCcEEEEeecCCeeec-Cceeec--hHHHHHHHh
Q 004952 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR----TVGGYIIVQGRADDTMNL-GGIKTS--SVEIERVCD 632 (722)
Q Consensus 560 ~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~----~~dG~l~~~GR~dd~ik~-~G~ri~--~~eIE~~l~ 632 (722)
.||++ +++.|++.|..+ +||+|||+|++ |+||+++|+||+||+||+ +|++|+ +.|||.++.
T Consensus 423 ~GY~~------~p~~t~~~~~~d------gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~ 490 (614)
T PRK08180 423 PGYWR------APELTAEAFDEE------GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSA 490 (614)
T ss_pred hhhcC------ChhHhHhhcccC------CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhh
Confidence 45555 556777777532 39999999999 468999999999999985 698776 788999884
Q ss_pred ccCCCcceeEEEeecCCCCCceEEEEEEEecCCC---------------CCCHHHHHHHHHHHHHhhc--------CC-C
Q 004952 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGF---------------TSQPDKLKMIFSKAIQSKL--------NP-L 688 (722)
Q Consensus 633 ~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~---------------~~~~~~l~~~l~~~l~~~~--------~p-~ 688 (722)
.||.|.+|+|++.++ +.+.|+|+++++. ..+.++|++++++.|..+. .| +
T Consensus 491 -~~p~V~~a~V~g~~~-----~~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~ 564 (614)
T PRK08180 491 -GAPLVQDVVITGHDR-----DEIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVAR 564 (614)
T ss_pred -cCchhheEEEEcCCC-----CceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeE
Confidence 899999999999875 4577999887541 1345679999999998887 67 5
Q ss_pred eeecCCCCCCC------CchhhHHHHHHHHhhhhhh
Q 004952 689 FKVVPEFPRTA------SNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 689 ~~~v~~lP~t~------~GKvdR~~L~~~~~~~~~~ 718 (722)
+++++++|+|+ +||+.|+++.+.|++++++
T Consensus 565 ~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~ 600 (614)
T PRK08180 565 ALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEA 600 (614)
T ss_pred EEEecCCCCCccCccCccccccHHHHHHHhHHHHHH
Confidence 66889998765 4588899999999888775
No 99
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-60 Score=536.21 Aligned_cols=489 Identities=19% Similarity=0.188 Sum_probs=386.0
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++||++|+++.+.+ +.+||.||.++++++|++|++. +++|++|++++++++++++++|||+++|++++|++
T Consensus 7 a~~~p~~~a~~~~~~~------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 7 AQTTPDKPAVIMASTG------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVN 80 (511)
T ss_pred HhhCCCceEEEecCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccc
Confidence 4689999999874331 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
+.++.+++.++++++++++++++.... ..........+. ..+.+...... .....+.+.......
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~- 147 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKL------DVARALLKQCPGVRHRLVLDGDGEL------EGFVGYAEAVAGLPA- 147 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhH------HHHHHHHhcCCCceEEEEecCCCCC------cccccHHHHhcCCCC-
Confidence 999999999999999999999987432 111122222221 12222111100 112223333321111
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEe--CChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHH
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW--TQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~--th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (722)
......++.++++|||||||.||||++ +|.++.. ........+++.+++++++..|++|+.+....+.
T Consensus 148 -------~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~ 220 (511)
T PRK13391 148 -------TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVML 220 (511)
T ss_pred -------CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHH
Confidence 011233567899999999999999996 4666432 2333445677889999999999999988877788
Q ss_pred HhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC--CCCCCccceeEEEeecCCCCcchHHHHHhhc
Q 004952 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (722)
Q Consensus 418 ~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~ 495 (722)
++..|+++++.+ ..++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+++.+.+
T Consensus 221 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~ 299 (511)
T PRK13391 221 VIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW 299 (511)
T ss_pred HHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc
Confidence 999999999986 4678899999999999999999999998876432 2334678999999999999999988887755
Q ss_pred cCCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCcccccccccc
Q 004952 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHE 575 (722)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t 575 (722)
+..+++.||+||++.+............+++|+|+++ .++|+|++|++++.|+. |||++..... ..|+.+++.+
T Consensus 300 -g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~--Gel~~~g~~~--~gy~~~~~~~ 373 (511)
T PRK13391 300 -GPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEP--GTIWFEGGRP--FEYLNDPAKT 373 (511)
T ss_pred -CCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCcc--eEEcCChhHh
Confidence 5789999999999865443322223445789999999 69999999999999985 9999944322 2234456666
Q ss_pred ccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceE
Q 004952 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (722)
Q Consensus 576 ~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~ 655 (722)
+..|..+ .+||+|||+|++++||.++++||.||++|++|.+|++.|||++|. +||.|.+|+|+++++...| +.
T Consensus 374 ~~~~~~~-----~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~-~~~~v~~~~v~~~~~~~~g-~~ 446 (511)
T PRK13391 374 AEARHPD-----GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLI-THPKVADAAVFGVPNEDLG-EE 446 (511)
T ss_pred HHhhccC-----CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEecCCcccC-ce
Confidence 6665433 249999999999999999999999999999999999999999995 8999999999999988877 78
Q ss_pred EEEEEEecCCCCC---CHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 656 LVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 656 l~a~vv~~~~~~~---~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+++++++.++... ..++++++++++||.|+.|. +..++++|+|+|||++|+.|++.+..
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 447 VKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 9999988764332 24789999999999999995 55899999999999999999998764
No 100
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-61 Score=551.00 Aligned_cols=499 Identities=14% Similarity=0.101 Sum_probs=361.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh---h-cCCC-----------CEEEEEcCCCHHHHHHH
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT---M-FSKG-----------DAIAIDMPMTVRAVIIY 250 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~---~-v~~g-----------d~V~l~~~~s~~~vv~~ 250 (722)
++++||++|+++... +..++.+||+||.++++++|++|.+ . +++| |+|+|+++|+++|++++
T Consensus 71 ~~~~p~~~Al~~~~~---g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~ 147 (746)
T PTZ00342 71 YKLNNNKIAIVEHSC---GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVAD 147 (746)
T ss_pred HhhcCCceeEeccCC---CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHH
Confidence 478999999986421 1224589999999999999999996 6 9998 99999999999999999
Q ss_pred HHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCC-------
Q 004952 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDV------- 321 (722)
Q Consensus 251 lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------- 321 (722)
+||+++|++.||+++.++.+++.++|+++++++|+++.... +.+..+....+. .++++.......
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~ 221 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKLIILDTLIKSKEININKE 221 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEEEEECCCCcccccccccc
Confidence 99999999999999999999999999999999999976432 222222223332 233332211000
Q ss_pred ----------CCCC-------------------------------------------CCCCCCHHHHhcccCCCCCCCCC
Q 004952 322 ----------GIPL-------------------------------------------REQDLSWKDFLSSVDYHPRPNYY 348 (722)
Q Consensus 322 ----------~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 348 (722)
.... ......|+++.+... ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~ 296 (746)
T PTZ00342 222 EKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-----TNY 296 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-----cCC
Confidence 0000 000011222211110 111
Q ss_pred CCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhc--CCCCCCEEEEecCccccchhHHHHHHhhcCCEEE
Q 004952 349 SPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLA 426 (722)
Q Consensus 349 ~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv 426 (722)
+.....++|+|+|+|||||||.||||++||+|+++.+....... ...+.+++++++|++|.++....+.+++.|++++
T Consensus 297 ~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~ 376 (746)
T PTZ00342 297 KIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTIN 376 (746)
T ss_pred CCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEE
Confidence 22344679999999999999999999999999988776543321 2335689999999999999877788899999999
Q ss_pred EecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhc--------CCCCC-------------------------------
Q 004952 427 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NCLEG------------------------------- 467 (722)
Q Consensus 427 ~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~--------~~~~~------------------------------- 467 (722)
+.+. ++..+++.|+++++|+++++|.++..|.+. .....
T Consensus 377 ~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 377 IWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 9864 678899999999999999999999988652 10000
Q ss_pred ---CCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccC-CCceEEEEC-CC
Q 004952 468 ---LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILD-EC 542 (722)
Q Consensus 468 ---~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld-~~ 542 (722)
.-.++||.+++||+++++++.+++...+ +++++++||+||+++..+.... .....+++|+|+ |+++++|+| ++
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~d~~~ 532 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVRTWET 532 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEecccc
Confidence 0026899999999999999999987755 6899999999999765444333 234568999998 999999998 44
Q ss_pred CCcCCCCCCccceEEE-ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeec-Cce
Q 004952 543 GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGI 620 (722)
Q Consensus 543 ~~~~p~G~~giGel~v-~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~-~G~ 620 (722)
+...+.+. .|||++ +|..+. .|+.+++.|++.|..+ +||+|||+|++|+||+|+|+||+||+||+ +|+
T Consensus 533 ~~~~~~~~--~GEl~vrGp~v~~--GY~~~pe~T~~~f~~d------GW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge 602 (746)
T PTZ00342 533 YKATDTLP--KGELLIKSDSIFS--GYFLEKEQTKNAFTED------GYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGE 602 (746)
T ss_pred cccCCCCC--ceEEEEecCcccc--cccCChhhhhhhcCcC------CcccCCcEEEECCCCeEEEEccCCCeEEeCCCE
Confidence 44444443 389998 333222 1333677898888643 29999999999999999999999999996 799
Q ss_pred eechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCC----------------CC-CCH-----------HH
Q 004952 621 KTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG----------------FT-SQP-----------DK 672 (722)
Q Consensus 621 ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~----------------~~-~~~-----------~~ 672 (722)
+|+|.|||++|. .||.|.+|+|++... . ..++|.|+++.. .. .+. .+
T Consensus 603 ~I~p~eIE~~l~-~~p~V~~~~VvG~~~---~-~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 677 (746)
T PTZ00342 603 YIETDMLNNLYS-QISFINFCVVYGDDS---M-DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNI 677 (746)
T ss_pred EEchHHHHHHHh-cCCCccEEEEEccCC---c-cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHH
Confidence 999999999995 999999999998532 1 468999988641 00 010 12
Q ss_pred HHHHHHHH---------HHhhcCC-Ceeec-CCC----CCCCCchhhHHHHHHHHhhhhh
Q 004952 673 LKMIFSKA---------IQSKLNP-LFKVV-PEF----PRTASNKLLRRVLRDQIKHELS 717 (722)
Q Consensus 673 l~~~l~~~---------l~~~~~p-~~~~v-~~l----P~t~~GKvdR~~L~~~~~~~~~ 717 (722)
+++++.+. |+.+-.. .+..+ +.| -+||+-|+.|+.+.+.++..++
T Consensus 678 ~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~ 737 (746)
T PTZ00342 678 YVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFID 737 (746)
T ss_pred HHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHH
Confidence 33433333 3333233 22211 222 2899999999999998885554
No 101
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.4e-60 Score=530.12 Aligned_cols=438 Identities=16% Similarity=0.183 Sum_probs=363.6
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+++.+. .+||+||.++++++|..|.+. +++||+|++++++++++++++|||+++|++++|++
T Consensus 13 a~~~~~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~ 84 (458)
T PRK09029 13 AQVRPQAIALRLNDE--------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLN 84 (458)
T ss_pred HHhCCCceeeecCCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecC
Confidence 368899999997666 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (722)
|..+.+++..+++++++++++++++... +. .+ . ...+. ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~---~~----~--------------------~~~~~-----~~~--- 125 (458)
T PRK09029 85 PQLPQPLLEELLPSLTLDFALVLEGENT----FS---AL----T--------------------SLHLQ-----LVE--- 125 (458)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCcccc----hh---hc----c--------------------ccccc-----ccc---
Confidence 9999999999999999999999864310 00 00 0 00000 000
Q ss_pred CCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCE
Q 004952 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (722)
Q Consensus 345 ~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~ 424 (722)
........++++++++|||||||.||||+++|++++..+......+++.++++++...|+.|.+++..++.+|..|++
T Consensus 126 --~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~ 203 (458)
T PRK09029 126 --GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGAT 203 (458)
T ss_pred --ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCce
Confidence 011123457899999999999999999999999999988877778899999999999999999998777788999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccc
Q 004952 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (722)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~Y 504 (722)
+++.+. ..+++.+ .++|.+.++|+++..|...... ..+||.+++||+++++.+.+++... +.++++.|
T Consensus 204 v~~~~~----~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~Y 271 (458)
T PRK09029 204 LVVRDK----QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGY 271 (458)
T ss_pred EEeCCh----HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccc
Confidence 998764 4566666 4899999999999999876432 3579999999999999988887654 68899999
Q ss_pred cccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCccccccccccccce
Q 004952 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (722)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f 579 (722)
|+||++...+.... ....++|+|++++.++|+| |||++ ..||++. ++.+..
T Consensus 272 G~tE~~~~~~~~~~---~~~~~~G~~~~~~~~~i~~-------------gel~v~g~~~~~gY~~~------~~~~~~-- 327 (458)
T PRK09029 272 GLTEMASTVCAKRA---DGLAGVGSPLPGREVKLVD-------------GEIWLRGASLALGYWRQ------GQLVPL-- 327 (458)
T ss_pred cccccCcceeccCC---CCCCCCCCCCCCCEEEEeC-------------CEEEEecCceeeeeecC------cccccc--
Confidence 99999864433221 2234699999999999986 56665 4566653 223321
Q ss_pred eccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEE
Q 004952 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (722)
Q Consensus 580 ~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~ 659 (722)
..+.+||+|||+|+++ ||+++|+||+||+||++|++|+|.|||++|. .||+|.+|+|++.+++..+ +.++++
T Consensus 328 -----~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~ 399 (458)
T PRK09029 328 -----VNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVIN-QHPLVQQVFVVPVADAEFG-QRPVAV 399 (458)
T ss_pred -----ccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHh-cCCCcceEEEEccCCcccC-ceEEEE
Confidence 1134599999999999 9999999999999999999999999999995 9999999999999998877 899999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 660 VVLKKGFTSQPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
|+.+. ..+.++|+++++++||.|+.| .++.++++|+|++||++|+.|++++.+...+
T Consensus 400 v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~~ 457 (458)
T PRK09029 400 VESDS--EAAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLGN 457 (458)
T ss_pred EEcCc--ccCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccCC
Confidence 98774 356789999999999999999 5668999999999999999999999887654
No 102
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.6e-61 Score=558.67 Aligned_cols=506 Identities=17% Similarity=0.154 Sum_probs=367.9
Q ss_pred CCCCCCceEEEEe-----------cCC----CCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHH
Q 004952 186 RRKEDNTVAIVWR-----------EDR----CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249 (722)
Q Consensus 186 a~~~pd~~Al~~~-----------~~~----~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~ 249 (722)
++++||++|+.+. ++. ...+.+..+||+||.++++++|++|.+. +++||+|+|+++|+++|+++
T Consensus 68 ~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~ 147 (696)
T PLN02387 68 CKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIA 147 (696)
T ss_pred HHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 4789999999542 110 0124456799999999999999999999 99999999999999999999
Q ss_pred HHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCCC----
Q 004952 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGI---- 323 (722)
Q Consensus 250 ~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---- 323 (722)
+|||+++|+++||+++.++.+++.++|++++++++|++.... +.+..+....+. .++.+.........
T Consensus 148 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~ 221 (696)
T PLN02387 148 LQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------KKLIDISSQLETVKRVIYMDDEGVDSDSSLSG 221 (696)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------HHHHHHhhccCCceEEEEECCCCchhhhhhhc
Confidence 999999999999999999999999999999999999986432 222222222222 22333221110000
Q ss_pred CCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhc-CCCCCCEEEE
Q 004952 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCW 402 (722)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~-~~~~~d~~l~ 402 (722)
.......+|+++....... ..+.....++|+++|+|||||||.||||++||+|++..+......+ ++.++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~ 297 (696)
T PLN02387 222 SSNWTVSSFSEVEKLGKEN----PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLA 297 (696)
T ss_pred cCCcEEEEHHHHHHhhccC----CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEE
Confidence 0011123566665443220 1112234679999999999999999999999999988877655443 5889999999
Q ss_pred ecCccccchhHHHHHHhhcCCEEEEecCCC-------ChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCC---------
Q 004952 403 PTNLGWVMGPVILFSSFLNGATLALYQGSP-------LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--------- 466 (722)
Q Consensus 403 ~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~-------~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--------- 466 (722)
+.|++|.++....+..+..|+++....... .+..+...++++++|++.++|.++..+.+.....
T Consensus 298 ~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~ 377 (696)
T PLN02387 298 YLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAK 377 (696)
T ss_pred ECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHH
Confidence 999999999866566677888876643211 1234567899999999999999999886421000
Q ss_pred ----------------------C--C-------------Cc-cceeEEEeecCCCCcchHHHHHhhccCCcccccccccc
Q 004952 467 ----------------------G--L-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (722)
Q Consensus 467 ----------------------~--~-------------~l-~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (722)
. . .+ ++||.+++||+++++++.+++...+ +++++++||+||
T Consensus 378 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~~YG~TE 456 (696)
T PLN02387 378 KLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQGYGLTE 456 (696)
T ss_pred HHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeEeechhh
Confidence 0 0 01 5899999999999999987776554 689999999999
Q ss_pred cccccccCCcCCcCccccccccCCCceEEEEC-CCCCcC---CCCCCccceEEE-----ecccCCCccccccccccccce
Q 004952 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPY---PDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (722)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~---p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f 579 (722)
+++..+.... .....+++|+|+++++++|+| +++... .++. .|||+| ..||++ +++.|++.|
T Consensus 457 t~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p--~GEi~vrGp~v~~GY~~------~pe~T~~~f 527 (696)
T PLN02387 457 TCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP--RGEIVIGGPSVTLGYFK------NQEKTDEVY 527 (696)
T ss_pred cccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--CceEEeccCcccchhcC------CHHHHhhhh
Confidence 9865544333 233467899999999999998 544322 1222 388988 345554 677888888
Q ss_pred eccccCCCceecccCceEEEecCCcEEEEeecCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEE
Q 004952 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (722)
Q Consensus 580 ~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a 658 (722)
..++ +|.+||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+++|++.+.. ..++|
T Consensus 528 ~~d~--~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~-~~p~V~~~~V~g~~~~----~~~~a 600 (696)
T PLN02387 528 KVDE--RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS-VSPYVDNIMVHADPFH----SYCVA 600 (696)
T ss_pred cccc--CCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh-cCCCeeEEEEEecCCc----ceEEE
Confidence 5432 35579999999999999999999999999998 599999999999995 9999999999986532 57899
Q ss_pred EEEecCCC----------C-CC------HHHHHHHHHH---------HHHhhcCCCee-ecCC-C-----CCCCCchhhH
Q 004952 659 FVVLKKGF----------T-SQ------PDKLKMIFSK---------AIQSKLNPLFK-VVPE-F-----PRTASNKLLR 705 (722)
Q Consensus 659 ~vv~~~~~----------~-~~------~~~l~~~l~~---------~l~~~~~p~~~-~v~~-l-----P~t~~GKvdR 705 (722)
+|++.+.. . .+ ..++++.+.+ +|+.+..|+.+ .+++ + -+||+.|+.|
T Consensus 601 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R 680 (696)
T PLN02387 601 LVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKR 680 (696)
T ss_pred EEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhh
Confidence 99986421 0 01 1122222222 35556666433 4433 2 2788899999
Q ss_pred HHHHHHHhhhhhh
Q 004952 706 RVLRDQIKHELSV 718 (722)
Q Consensus 706 ~~L~~~~~~~~~~ 718 (722)
+.+.+.|++++++
T Consensus 681 ~~i~~~y~~~i~~ 693 (696)
T PLN02387 681 EQIRKKFKDDLKK 693 (696)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998864
No 103
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-60 Score=519.28 Aligned_cols=405 Identities=14% Similarity=0.127 Sum_probs=347.2
Q ss_pred EEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHH
Q 004952 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (722)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l 272 (722)
+|++.++ ++||+||+++++++|+.|. . +++|++|+++++|++++++++|||+++|++++|++|..+.+++
T Consensus 1 ~~~~~~~--------~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~ 71 (414)
T PRK08308 1 MLIVNDE--------EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAA 71 (414)
T ss_pred CeEecCc--------eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHH
Confidence 3566666 9999999999999999985 6 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCcc
Q 004952 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (722)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (722)
..++++++++.+++++... . . . . ...
T Consensus 72 ~~~~~~~~~~~~i~~~~~~------~---------------~------------------~----~-----------~~~ 97 (414)
T PRK08308 72 IRMAKRAGCHGLLYGESDF------T---------------K------------------L----E-----------AVN 97 (414)
T ss_pred HHHHHhCCCCEEEecCccc------c---------------c------------------c----c-----------CCC
Confidence 9999999999999875210 0 0 0 0 001
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEecCC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGS 431 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~ 431 (722)
..+++++|++|||||||.||||+++|+++.+.+......+++..+|+++...|+.|++++ ..++.+|..|+++++.+ .
T Consensus 98 ~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~ 176 (414)
T PRK08308 98 YLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-N 176 (414)
T ss_pred CCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-C
Confidence 245789999999999999999999999999888877788888999999999999999987 56889999999999986 4
Q ss_pred CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccccccccccc
Q 004952 432 PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSS 511 (722)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 511 (722)
.++..+++.++++++|++.++|+++..|.+.... ..+++.+++||++++++..+.+++. ..+++|.||+||+++
T Consensus 177 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~ 250 (414)
T PRK08308 177 KNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGC 250 (414)
T ss_pred CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCC
Confidence 6788899999999999999999999999875422 1478899999999999988888765 468999999999986
Q ss_pred ccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccccccccccceeccccCCCceec
Q 004952 512 AYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 591 (722)
Q Consensus 512 ~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~y 591 (722)
+..... ....+++|+|++++++++.++. |++ ||+++..+ .+||
T Consensus 251 ~~~~~~---~~~~~~~G~p~~~~~~~~~~~~------~~~--gel~v~~~--------------------------~~~~ 293 (414)
T PRK08308 251 VSICPD---MKSHLDLGNPLPHVSVSAGSDE------NAP--EEIVVKMG--------------------------DKEI 293 (414)
T ss_pred eeecCC---CCCCCccCccCCCeEEEEecCC------CCC--ceEEEEcC--------------------------CceE
Confidence 433221 1244679999999999997642 443 89987421 2389
Q ss_pred ccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHH
Q 004952 592 RHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPD 671 (722)
Q Consensus 592 rTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~ 671 (722)
+|||+|++++||+++|+||.||+||++|+||+|.|||++|. .+|+|.+|+|++.+++..+ +.++++++... ..+.+
T Consensus 294 ~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~v~~a~v~~~~~~~~~-~~~~~~v~~~~--~~~~~ 369 (414)
T PRK08308 294 FTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVML-RLPGVQEAVVYRGKDPVAG-ERVKAKVISHE--EIDPV 369 (414)
T ss_pred ECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCC--CCCHH
Confidence 99999999999999999999999999999999999999995 9999999999999988777 88999988764 46678
Q ss_pred HHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHH
Q 004952 672 KLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLR 709 (722)
Q Consensus 672 ~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~ 709 (722)
+++++++++|+.|++|. ++++++||+|++||++|++|+
T Consensus 370 ~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 370 QLREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 99999999999999995 558999999999999999543
No 104
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.1e-61 Score=557.66 Aligned_cols=500 Identities=17% Similarity=0.168 Sum_probs=359.4
Q ss_pred cCCCCCCceEEEEecC-----------CCC--------CCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004952 185 HRRKEDNTVAIVWRED-----------RCD--------ESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~-----------~~~--------~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~ 244 (722)
+++++||++|+.+... ++. .+..+.+||+||+++++++|++|++. +++||+|+|+++|++
T Consensus 78 ~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 157 (700)
T PTZ00216 78 ICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW 157 (700)
T ss_pred HHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH
Confidence 4478999999998521 010 12457999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhc--CCC-cEEEEcCCCCCC
Q 004952 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--APL-KAIVLPAIGNDV 321 (722)
Q Consensus 245 ~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~ 321 (722)
+|++++|||+++|++++|+++.++++++.+++++++++++|++.... +.+...... .+. .++.+......
T Consensus 158 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~~~~~ii~~~~~~~~- 230 (700)
T PTZ00216 158 EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------PNLLRLMKSGGMPNTTIIYLDSLPAS- 230 (700)
T ss_pred HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------HHHHHhhhhccCCceEEEEECCCccc-
Confidence 99999999999999999999999999999999999999999986422 111111111 111 22333211100
Q ss_pred CCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhc----C-CCC
Q 004952 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI----D-LKV 396 (722)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~----~-~~~ 396 (722)
.........+|+++....... ...........++|++||+|||||||.||||++||+|+++.+.+....+ + +.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 309 (700)
T PTZ00216 231 VDTEGCRLVAWTDVVAKGHSA-GSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEE 309 (700)
T ss_pred cccCCceEEEHHHHHHhCCcc-ccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCC
Confidence 000112345677776544210 0111112334689999999999999999999999999988876654433 2 478
Q ss_pred CCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHH-------HHHHhCCcEEechhHHHHHHHhcCCC----
Q 004952 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK-------FVQDAGVTVLGTVPSLVKAWRNTNCL---- 465 (722)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~-------~i~~~~vt~l~~~P~~l~~l~~~~~~---- 465 (722)
+|+++++.|++|.++.......++.|+++++.+ +..+.+ .++++++|++.++|.+++.+.+....
T Consensus 310 ~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~----~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~ 385 (700)
T PTZ00216 310 DETYCSYLPLAHIMEFGVTNIFLARGALIGFGS----PRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPP 385 (700)
T ss_pred CCEEEEEChHHHHHHHHHHHHHHHcCCEEEECC----HHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhc
Confidence 899999999999888755555677888776632 333333 68899999999999999887542100
Q ss_pred ---------------------CCCC----------------ccceeEEEeecCCCCcchHHHHHhhccCCcccccccccc
Q 004952 466 ---------------------EGLD----------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (722)
Q Consensus 466 ---------------------~~~~----------------l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (722)
...+ .++||.+++||+++++++.++++..+ + +++|+||+||
T Consensus 386 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG~TE 463 (700)
T PTZ00216 386 VGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWGLTE 463 (700)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccCccc
Confidence 0000 15899999999999999988776654 4 8999999999
Q ss_pred cccccccCCcCCcCccccccccCCCceEEEECCCCC--cCCCCCCccceEEE-----ecccCCCccccccccccccceec
Q 004952 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGV--PYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRG 581 (722)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~--~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~ 581 (722)
+++..+.... .....+++|+|++|++++|+|+++. ..+++. .|||+| +.||++ +++.|++.|..
T Consensus 464 t~~~~~~~~~-~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~--~GEL~vrG~~v~~GY~~------~pe~T~~~f~~ 534 (700)
T PTZ00216 464 TVCCGGIQRT-GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP--RGEILLRGPFLFKGYYK------QEELTREVLDE 534 (700)
T ss_pred ccccccccCC-CCCCCCCcCCcCCCeEEEEeechhhccCCCCCC--CceEEEcCCcccchhcC------ChhHhhhhccc
Confidence 9865443322 2345689999999999999997642 334444 489998 345554 67788888865
Q ss_pred cccCCCceecccCceEEEecCCcEEEEeecCCeee-cCceeechHHHHHHHhccCCCccee--EEEeecCCCCCceEEEE
Q 004952 582 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILET--AAISVSPAGGGPEVLVI 658 (722)
Q Consensus 582 ~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik-~~G~ri~~~eIE~~l~~~~p~V~~~--~vv~~~~~~~g~~~l~a 658 (722)
++ ||+|||+|++|+||+|+|+||+||+|| .+|++|+|+|||++|. +||.|.++ +|++.++ . ..++|
T Consensus 535 dG------w~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~-~~p~V~~~~~~v~~~~~---~-~~l~a 603 (700)
T PTZ00216 535 DG------WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG-QNELVVPNGVCVLVHPA---R-SYICA 603 (700)
T ss_pred cC------CeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh-cCcCcccceEEEEEecC---C-ceEEE
Confidence 42 999999999999999999999999999 8999999999999995 99999973 4444332 2 67999
Q ss_pred EEEecCCC----------C------CCHHHHHHHHHHHHH---------hhcCCC-eeec------CCCCCCCCchhhHH
Q 004952 659 FVVLKKGF----------T------SQPDKLKMIFSKAIQ---------SKLNPL-FKVV------PEFPRTASNKLLRR 706 (722)
Q Consensus 659 ~vv~~~~~----------~------~~~~~l~~~l~~~l~---------~~~~p~-~~~v------~~lP~t~~GKvdR~ 706 (722)
+|++.... . .+..++++.+.+.+. .+-.++ +.++ +.=-+|+++|+.|+
T Consensus 604 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~ 683 (700)
T PTZ00216 604 LVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRR 683 (700)
T ss_pred EEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchH
Confidence 99875310 0 011233444444332 222232 2222 33347999999999
Q ss_pred HHHHHHhhhhhh
Q 004952 707 VLRDQIKHELSV 718 (722)
Q Consensus 707 ~L~~~~~~~~~~ 718 (722)
++.+.|++.+++
T Consensus 684 ~i~~~y~~~i~~ 695 (700)
T PTZ00216 684 VIDERYADLIKE 695 (700)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 105
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5e-60 Score=532.19 Aligned_cols=475 Identities=20% Similarity=0.144 Sum_probs=376.8
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEec
Q 004952 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 287 (722)
.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhcCCccccchHHHhhcCC--CcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCC
Q 004952 288 DFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365 (722)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TS 365 (722)
+... +......+... ...+.+... . ......+++....... ......++.++++|||
T Consensus 91 ~~~~------~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TS 149 (502)
T PRK08276 91 AALA------DTAAELAAELPAGVPLLLVVAG-P------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSS 149 (502)
T ss_pred cchh------hHHHHHhhhccccccEEEEeCC-C------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECC
Confidence 7532 11222222221 122222111 0 0122334444332111 1122446789999999
Q ss_pred CCCCCCceEEeCChHHHHHH------HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHH
Q 004952 366 GTTGEPKAIPWTQLSSIRCT------AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK 439 (722)
Q Consensus 366 GSTG~PKgV~~th~~~~~~~------~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~ 439 (722)
||||.||||+++|.++.... ......+....++++++..++.|..++...+.++..|+++++.+ ..++..+++
T Consensus 150 GtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~ 228 (502)
T PRK08276 150 GTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALA 228 (502)
T ss_pred CCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHH
Confidence 99999999999988754321 22222233357789999999999988876778999999998876 467889999
Q ss_pred HHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCC
Q 004952 440 FVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS 517 (722)
Q Consensus 440 ~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 517 (722)
.++++++|++.++|+++..+++.... ...+++++|.+++||++++.++.+++.+.+ +.++++.||+||++.++....
T Consensus 229 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~ 307 (502)
T PRK08276 229 LIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS 307 (502)
T ss_pred HHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC
Confidence 99999999999999999999876432 345688999999999999999999888765 567999999999987444333
Q ss_pred cCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccccccccccceeccccCCCceecccCceE
Q 004952 518 LLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDII 597 (722)
Q Consensus 518 ~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~ 597 (722)
.......+++|+|+ ++.++|+|+++++++.|+. ||+++..+... ..++.+++.+...|..+ +||+|||+|
T Consensus 308 ~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~-~gy~~~~~~~~~~~~~~------~~~~TGD~~ 377 (502)
T PRK08276 308 EDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEI--GTVYFEMDGYP-FEYHNDPEKTAAARNPH------GWVTVGDVG 377 (502)
T ss_pred ccccccCCCcceec-ccEEEEECCCCCCCcCCCc--eEEEEECCCcc-chhcCCHHHHHHHhcCC------CceeecceE
Confidence 22233457899999 8899999999999999985 99999532221 12333555666666542 399999999
Q ss_pred EEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCH---HHHH
Q 004952 598 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP---DKLK 674 (722)
Q Consensus 598 ~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~---~~l~ 674 (722)
++++||.+++.||+||++|++|.+|++.|||.+|. +||+|.+++|++..++..+ +.++++|+++++...+. ++++
T Consensus 378 ~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~i~ 455 (502)
T PRK08276 378 YLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLV-THPKVADVAVFGVPDEEMG-ERVKAVVQPADGADAGDALAAELI 455 (502)
T ss_pred EEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeCCCcccC-ceEEEEEEECCCCCCChhhHHHHH
Confidence 99999999999999999999999999999999996 8999999999999988777 89999999987543332 4789
Q ss_pred HHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 675 MIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 675 ~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
++++++|+.++.|. ++.+++||+|+|||++|++|++.+.....+
T Consensus 456 ~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 500 (502)
T PRK08276 456 AWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGRQR 500 (502)
T ss_pred HHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhhhh
Confidence 99999999999994 558999999999999999999998776544
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=3.7e-60 Score=582.86 Aligned_cols=485 Identities=18% Similarity=0.173 Sum_probs=378.5
Q ss_pred CCC-CCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKE-DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~-pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++ |+++|+.+.+. +++||+||+++++++|++|++.+++||+|+++++|++++++++|||+++|++++|+||
T Consensus 642 ~~~~~~~~ai~~~~~-------~~~Ty~el~~~~~~lA~~L~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 714 (1140)
T PRK06814 642 KIHGFKKLAVEDPVN-------GPLTYRKLLTGAFVLGRKLKKNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINF 714 (1140)
T ss_pred HHcCCCCeEeECCCC-------CccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCC
Confidence 455 46788875332 2899999999999999999633999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC--CcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCC
Q 004952 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (722)
.++.+++.+++++++++++++++......+. ....+..+ ...+.++.... ....++.+......
T Consensus 715 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~-- 780 (1140)
T PRK06814 715 SAGIANILSACKAAQVKTVLTSRAFIEKARL----GPLIEALEFGIRIIYLEDVRA--------QIGLADKIKGLLAG-- 780 (1140)
T ss_pred CCCHHHHHHHHHHcCCCEEEecHHHHhhhcc----hhHHHHhccCceEEEehHhhc--------cCChHHHHHHHhhc--
Confidence 9999999999999999999998754321111 11111111 12222221100 00111111110000
Q ss_pred CCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcC
Q 004952 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (722)
Q Consensus 344 ~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G 422 (722)
.....+.....++|++|++|||||||.||||+++|+++.+.+......++++++|++++..|+.|..+. ..++.++.+|
T Consensus 781 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 860 (1140)
T PRK06814 781 RFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSG 860 (1140)
T ss_pred cCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcC
Confidence 000011113467999999999999999999999999999888888888899999999999999999998 7788999999
Q ss_pred CEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccc
Q 004952 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n 502 (722)
+++++.+...+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||++++++.+++.+.+ +++++|
T Consensus 861 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~ 937 (1140)
T PRK06814 861 VKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILE 937 (1140)
T ss_pred CEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEe
Confidence 99999875556667889999999999999999999987753 345678999999999999999988887765 678999
Q ss_pred cccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCcccccccccccc
Q 004952 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (722)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~ 577 (722)
.||+||++..+..... .....+++|+|++++++++.+..+ .|+. |||++. .||++. ++ ..
T Consensus 938 ~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~~~~~~~~----~~~~--Gel~v~g~~~~~gY~~~------~~--~~ 1002 (1140)
T PRK06814 938 GYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEYRLEPVPG----IDEG--GRLFVRGPNVMLGYLRA------EN--PG 1002 (1140)
T ss_pred ccccccccceEEecCC-CCCCCCcCCccCCCCeEEEeecCC----CCCc--eEEEEeCCCcchhhcCC------CC--CC
Confidence 9999999875543322 224467899999999999987543 2453 999983 344432 11 11
Q ss_pred ceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 578 ~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
.+.. .+++||+|||+|++|+||+++++||.||+||++|+||+|.|||++|. +||.|.+++|++++++..| ++++
T Consensus 1003 ~~~~----~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~ 1076 (1140)
T PRK06814 1003 VLEP----PADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAA-ELWPDALHAAVSIPDARKG-ERII 1076 (1140)
T ss_pred cccc----CCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHH-hcCCcccEEEEEcccCCCC-ceEE
Confidence 1111 13449999999999999999999999999999999999999999995 9999999999999998887 7888
Q ss_pred EEEEecCCCCCCHHHHHHHHHHH-HHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhhhhhc
Q 004952 658 IFVVLKKGFTSQPDKLKMIFSKA-IQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHELSVR 719 (722)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~-l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~~~~~ 719 (722)
+++.. .+.+.++++++++++ ++.+++|. ++.+++||+|+|||+||++|+++..+....+
T Consensus 1077 ~~~~~---~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~ 1137 (1140)
T PRK06814 1077 LLTTA---SDATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAAKP 1137 (1140)
T ss_pred EEEcC---CCcCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhccc
Confidence 77652 245668999999975 99999994 5589999999999999999999988876654
No 107
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.7e-59 Score=540.27 Aligned_cols=501 Identities=18% Similarity=0.182 Sum_probs=364.3
Q ss_pred CCCCCCceEEEEec-CCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++++|+++|+.+.. ..+..+.+..+||+||.++++++|+.|.+. +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 52 ~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl 131 (660)
T PLN02430 52 VEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPL 131 (660)
T ss_pred HHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 36899999997642 111123345689999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCC--cEEEEcCCCCCCC---CCCCCCCCCHHHHhcc
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG---IPLREQDLSWKDFLSS 338 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 338 (722)
++.++++++.+++++++++++|+++.... ..+.......+. .++.+........ ........+|++++..
T Consensus 132 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02430 132 YDTLGPGAVDYIVDHAEIDFVFVQDKKIK-----ELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHM 206 (660)
T ss_pred ccCCCHHHHHHHHhccCCCEEEECHHHHH-----HHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHh
Confidence 99999999999999999999999864210 011111111111 1222221110000 0001123467776654
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhh-----cCCCCCCEEEEecCccccchhH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-----IDLKVGDVYCWPTNLGWVMGPV 413 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~ 413 (722)
.... . .......++|+++|+|||||||.||||++||++++..+...... .+++++|+++++.|++|.++..
T Consensus 207 ~~~~--~--~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~ 282 (660)
T PLN02430 207 GKEN--P--SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRM 282 (660)
T ss_pred hccC--C--CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHH
Confidence 3321 1 11123457999999999999999999999999998876654321 2567899999999999998876
Q ss_pred HHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCC-----------------------------
Q 004952 414 ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----------------------------- 464 (722)
Q Consensus 414 ~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~----------------------------- 464 (722)
..+.++..|++++++.. ++..+++.|+++++|++.++|.+++.+.+...
T Consensus 283 ~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (660)
T PLN02430 283 IEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGY 360 (660)
T ss_pred HHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 55667899999988754 55789999999999999999999987764200
Q ss_pred --CCCC---C----------c-cceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCcccccc
Q 004952 465 --LEGL---D----------W-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS 528 (722)
Q Consensus 465 --~~~~---~----------l-~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG 528 (722)
.... + + ++||.+++||+++++++.++++ .++++++++.||+||+++..+..........+++|
T Consensus 361 ~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG 439 (660)
T PLN02430 361 SHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVG 439 (660)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeeccccCCCCCCcc
Confidence 0000 0 1 5899999999999999866654 44456899999999998655444333333468999
Q ss_pred ccCCCceEEEEC--CCC-CcCCCCCCccceEEE-e----cccCCCccccccccccccceeccccCCCceecccCceEEEe
Q 004952 529 TATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-F----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT 600 (722)
Q Consensus 529 ~p~~~~~~~vld--~~~-~~~p~G~~giGel~v-~----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~ 600 (722)
+|.+++++++.| +.| .+++.|. .|||+| + .||++ +++.|++.|. + | ||+|||+|++|
T Consensus 440 ~p~~~~evki~d~~~~g~~~~~~~~--~GEi~vrg~~v~~GY~~------~~e~t~~~~~-d----G--w~~TGDig~~d 504 (660)
T PLN02430 440 APAVYNELRLEEVPEMGYDPLGEPP--RGEICVRGKCLFSGYYK------NPELTEEVMK-D----G--WFHTGDIGEIL 504 (660)
T ss_pred CCCCceEEEEEEcCCcCcccCCCCC--cceEEecCCCccccccC------ChHHhhhhhh-c----c--ceeccceEEEC
Confidence 999999999986 333 4455544 499999 3 35554 6667777773 1 2 99999999999
Q ss_pred cCCcEEEEeecCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC----------CC-
Q 004952 601 VGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF----------TS- 668 (722)
Q Consensus 601 ~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~----------~~- 668 (722)
+||+|+|+||+||+||+ +|++|+|.+||++| .+||.|.+|+|++.. .+ +.++|+|++++.. ..
T Consensus 505 ~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l-~~~p~V~~~~V~G~~---~~-~~~~A~vv~~~~~~~~~~~~~~~~~~ 579 (660)
T PLN02430 505 PNGVLKIIDRKKNLIKLSQGEYVALEYLENVY-GQNPIVEDIWVYGDS---FK-SMLVAVVVPNEENTNKWAKDNGFTGS 579 (660)
T ss_pred CCCcEEEEEcccccEEcCCCcEEchHHHHHHH-hcCCCeeEEEEEecC---Cc-ceEEEEEEcCHHHHHHHHHhCCCCCC
Confidence 99999999999999997 69999999999999 599999999999832 23 7899999986421 00
Q ss_pred -----CHHHHHHHHHHH---------HHhhcCCC-eeecC-C-----CCCCCCchhhHHHHHHHHhhhhhh
Q 004952 669 -----QPDKLKMIFSKA---------IQSKLNPL-FKVVP-E-----FPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 669 -----~~~~l~~~l~~~---------l~~~~~p~-~~~v~-~-----lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
+..++++.+.+. |+.+-.++ +..++ . =.+|+++|+.|+.+.+.|+.++++
T Consensus 580 ~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 580 FEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 112344444332 44444442 22222 2 358999999999999999888764
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-59 Score=530.36 Aligned_cols=477 Identities=18% Similarity=0.176 Sum_probs=366.4
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
+++|+.++ +..+. +..+.+||+||+.+++++|.+|++. +++||+|+++++|++++++++|||+++|++++|+++
T Consensus 32 ~~~~~~~~-~~~~~----~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~ 106 (579)
T PRK09192 32 LGEAGMNF-YDRRG----QLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPL 106 (579)
T ss_pred ccCCceEE-EecCC----CEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccC
Confidence 45665544 33222 2235899999999999999999999 999999999999999999999999999999999987
Q ss_pred CCC-------HHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 266 SFA-------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 266 ~~~-------~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
..+ .+++.+++++++++++|+++... +.......... ... ...+.++...
T Consensus 107 ~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~------~~~~~~~~~~~-~~~----------------~~~~~~~~~~ 163 (579)
T PRK09192 107 PMGFGGRESYIAQLRGMLASAQPAAIITPDELL------PWVNEATHGNP-LLH----------------VLSHAWFKAL 163 (579)
T ss_pred CcccccchHHHHHHHHHHHhcCCCEEEeChHHH------HHHHHhhcccc-ccc----------------eeehhhhccc
Confidence 543 68999999999999999987532 11111111110 000 1122222221
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh-hcCCCCCCEEEEecCccccchhHH-HH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LF 416 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~-~~ 416 (722)
... ........+++++|++|||||||.||||+++|+++...+..... .+++.++|+++...|+.|++++.. ++
T Consensus 164 ~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 238 (579)
T PRK09192 164 PEA-----DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLL 238 (579)
T ss_pred CCC-----ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHH
Confidence 111 11112345689999999999999999999999999888877766 788999999999999999999864 56
Q ss_pred HHhhcCCEEEEecCC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcC---CCCCCCccceeEEEeecCCCCcchHHH
Q 004952 417 SSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN---CLEGLDWTKIRSFASTGETSNVDDDLW 490 (722)
Q Consensus 417 ~~L~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~---~~~~~~l~~Lr~i~~~Ge~l~~~~~~~ 490 (722)
.++..|+++++.+.. .++..+++.+.++++|++..+|.++..+.... .....+++++|.+++||+++++.+.+.
T Consensus 239 ~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~ 318 (579)
T PRK09192 239 TPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQ 318 (579)
T ss_pred HHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHH
Confidence 778999999776521 25678899999999998887666665554322 123356889999999999999999888
Q ss_pred HHhhcc-----CCcccccccccccccccccCCcCCc---------------------------CccccccccCCCceEEE
Q 004952 491 LSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP---------------------------QAFGAFSTATMTAGLVI 538 (722)
Q Consensus 491 ~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~---------------------------~~~~~iG~p~~~~~~~v 538 (722)
+.+.+. ...+++.||+||++..++....... ....++|+|+++++++|
T Consensus 319 ~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i 398 (579)
T PRK09192 319 FAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEI 398 (579)
T ss_pred HHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEE
Confidence 776543 1358999999999865443221100 11247899999999999
Q ss_pred ECCCCCcCCCCCCccceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCC
Q 004952 539 LDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADD 613 (722)
Q Consensus 539 ld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd 613 (722)
+|+++++++.|+. |||++. .||++ + ..+.+.|.. ..||+|||+|++ +||+++|+||+||
T Consensus 399 ~d~~~~~~~~g~~--Gel~i~g~~~~~gY~~------~-~~~~~~~~~------dgw~~TGDlg~~-~~G~l~~~GR~dd 462 (579)
T PRK09192 399 RNEAGMPLPERVV--GHICVRGPSLMSGYFR------D-EESQDVLAA------DGWLDTGDLGYL-LDGYLYITGRAKD 462 (579)
T ss_pred ECCCCCCCCCCCE--EEEEecCCchhhhhcC------C-ccccccccC------CceeeccceeeE-ECCEEEEEecccc
Confidence 9999999999984 999983 34444 3 444445443 239999999999 9999999999999
Q ss_pred eeecCceeechHHHHHHHhccCCCcc--eeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHH-hhcCCC-e
Q 004952 614 TMNLGGIKTSSVEIERVCDQADESIL--ETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ-SKLNPL-F 689 (722)
Q Consensus 614 ~ik~~G~ri~~~eIE~~l~~~~p~V~--~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~-~~~~p~-~ 689 (722)
+||++|+||+|.|||++|. .||+|. +|+|++++++. + +.++++++..++...+.++|++++++.++ .++.|. +
T Consensus 463 ~i~~~G~~v~p~eIE~~l~-~~p~V~~~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i 539 (579)
T PRK09192 463 LIIINGRNIWPQDIEWIAE-QEPELRSGDAAAFSIAQEN-G-EKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAV 539 (579)
T ss_pred EEEECCCccCHHHHHHHHH-hcCCccCCcEEEEEeccCC-C-eeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceE
Confidence 9999999999999999995 999998 89999998874 4 58889988876555566889999999985 577774 4
Q ss_pred eec--CCCCCCCCchhhHHHHHHHHhhh
Q 004952 690 KVV--PEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 690 ~~v--~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
.++ ++||+|++||++|++|++++..-
T Consensus 540 ~~~~~~~lP~t~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 540 ELVPPHSLPRTSSGKLSRAKAKKRYLSG 567 (579)
T ss_pred EEeCCCCcCCCCCcchhHHHHHHHHHcC
Confidence 455 58999999999999999987653
No 109
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-60 Score=551.48 Aligned_cols=543 Identities=20% Similarity=0.205 Sum_probs=421.6
Q ss_pred hHHHHHHHHHHHHHhh-ccCCChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCCC----CCccCCC--cccc
Q 004952 21 EEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP----PLYWFPS--LDQS 93 (722)
Q Consensus 21 ~~~~~~~~~l~~~~~~-~~~~~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~ 93 (722)
.+..+|.+.++++.+. ..+++||++||++ +++.+.+.+... .++ |+++|++++..... ....... ....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~h~~~p~~~-l~~~~~~~~~~~-~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (642)
T COG1020 75 SGRVTFAELLARLRELALGALEHQDLPGEQ-LVERLGRERSLS-EPL--FDVVFVLQNGPTAGLKLPGLRVEELGIETPA 150 (642)
T ss_pred CCCCCHHHHHHHHHHHHHHHhhccCCCHHH-HHHHHhhhccCC-CCc--eeeEEEecCcccccccccccccccccccCcc
Confidence 3334556655555555 7777999999999 999999887777 666 78888887643322 1111111 1345
Q ss_pred ccccHHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeeecCCeee--ccCCCCCCCCCCcCCC
Q 004952 94 KLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKHGGTWLPG 170 (722)
Q Consensus 94 ~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~w~~~ 170 (722)
.++|+.+...+. ++...+ |.. ++|+..+++++..+|..++..+...+......+ +...++ ..|+ .
T Consensus 151 ~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~----~~~~-~ 218 (642)
T COG1020 151 AKLDLALAVVEG--GLRLSFDYAR-----ELFDAETIERELRHFLQLLAALADAPRTSLSALPLLLPSER----EVWN-A 218 (642)
T ss_pred cccceEEEEEeC--ceEEEEEeec-----ccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH----hhcc-c
Confidence 677777776555 555566 888 999999999999999999999887777444332 333322 3366 3
Q ss_pred Cccchh-hhcccC--cccCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHH
Q 004952 171 SVLNIA-ECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRA 246 (722)
Q Consensus 171 ~~~~~~-~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~ 246 (722)
...... ..+++. ..+++++|+++|+++.+. ++||+||+.+++++|+.|.+. ++++++|++++++++++
T Consensus 219 ~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~~~--------~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~ 290 (642)
T COG1020 219 LAAPIPLRLTIHLLFEEQAATTPDAVALVRGGQ--------QLTYAELDARANRLARLLISLGVGPGETVAILADRSLEL 290 (642)
T ss_pred cccCCCccchHHHHHHHHHHhCCCceeEecCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHH
Confidence 322222 122322 346789999999998866 999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCC
Q 004952 247 VIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLR 326 (722)
Q Consensus 247 vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (722)
+++++|++|+|++|+|+||.+|.+|+.+++++++++.+++...........+.
T Consensus 291 i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 343 (642)
T COG1020 291 VVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--------------------------- 343 (642)
T ss_pred HHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc---------------------------
Confidence 99999999999999999999999999999999999999998532210000000
Q ss_pred CCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCc
Q 004952 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNL 406 (722)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 406 (722)
+..+........ .........+++++|++|||||||+||||+++|+++++.+.+....+.++..|+++..+++
T Consensus 344 ---~~~~~~~~~~~~----~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~ 416 (642)
T COG1020 344 ---LALDDALSEIPD----TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASL 416 (642)
T ss_pred ---cccccccccCCc----cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCc
Confidence 000000000000 0000223456899999999999999999999999999988888888999999999999999
Q ss_pred cccchhHHHHHHhhcCCEEEEecCC--CChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC--CCCCccceeEEEeecCC
Q 004952 407 GWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGET 482 (722)
Q Consensus 407 ~~~~~~~~~~~~L~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~~Ge~ 482 (722)
+||.+.+++|.++++|+++++.+.. .++..+.+.+.++++|++..+|+++..+...... .....+.+|.+++|||.
T Consensus 417 ~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~ 496 (642)
T COG1020 417 SFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEA 496 (642)
T ss_pred ccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCC
Confidence 9999999999999999999998753 3778899999999999999999999999876221 12223459999999999
Q ss_pred CCcchHHHHHhhcc-CCcccccccccccccccccCCcCCcCc-cccccccCCCceEEEECCCCCcCCCCCCccceEEE--
Q 004952 483 SNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQA-FGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (722)
Q Consensus 483 l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~-~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-- 558 (722)
++..+...+....+ ...+.|.||+||+++.+.......... ..++|+|++|+.++|+|+.++++|.|+. ||+++
T Consensus 497 l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~--gel~i~g 574 (642)
T COG1020 497 LPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVP--GELYIAG 574 (642)
T ss_pred CCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCC--eeeEECC
Confidence 99999887766544 467999999999776544433322111 5799999999999999999999999997 88887
Q ss_pred ---ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccC
Q 004952 559 ---FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (722)
Q Consensus 559 ---~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~ 635 (722)
+.||++ +++.|+++|..+ |+|+|||++|+++||.++|+||.|+|||++|+||+++|||..+. .+
T Consensus 575 ~~~a~gy~~------~p~lt~~~f~~~------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~-~~ 641 (642)
T COG1020 575 LGLALGYLN------RPDLTAERFIAL------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALA-EQ 641 (642)
T ss_pred cchhhhhcC------ChhhhHHHhhhc------cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHh-cC
Confidence 455555 667999999876 49999999999999999999999999999999999999999994 66
Q ss_pred C
Q 004952 636 E 636 (722)
Q Consensus 636 p 636 (722)
|
T Consensus 642 ~ 642 (642)
T COG1020 642 P 642 (642)
T ss_pred C
Confidence 5
No 110
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.9e-59 Score=536.19 Aligned_cols=490 Identities=17% Similarity=0.139 Sum_probs=362.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++||++|+++.+. ..+.++.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 59 a~~~pd~~a~~~~~~--~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 136 (624)
T PRK12582 59 AAEAPDRPWLAQREP--GHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVS 136 (624)
T ss_pred HHHCCCchheecccC--CCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeecc
Confidence 478999999987542 113346899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCH-----HHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhccc
Q 004952 265 DSFAA-----REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (722)
Q Consensus 265 p~~~~-----~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (722)
|.++. +++.+++++++++++|+++.... ...... ........+++..... ......+.++....
T Consensus 137 p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~-~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~ 205 (624)
T PRK12582 137 PAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPF----ARALAA-LDLLDVTVVHVTGPGE------GIASIAFADLAATP 205 (624)
T ss_pred CccccccCCHHHHHHHHHhcCCcEEEecCHHHH----HHHHHh-hhhcCceEEEEcCCCc------ccccccHHHHhhcC
Confidence 99985 89999999999999999863110 000011 1111122233221100 01223455554432
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCC---CCEEEEecCccccchh-HHH
Q 004952 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV---GDVYCWPTNLGWVMGP-VIL 415 (722)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~~~-~~~ 415 (722)
.. ...........++++++|+|||||||.||||+++|++++..+......+.... .++++.+.|++|.++. ..+
T Consensus 206 ~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 283 (624)
T PRK12582 206 PT--AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANF 283 (624)
T ss_pred Cc--chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHH
Confidence 11 00001112345789999999999999999999999999887765544444444 5799999999999987 456
Q ss_pred HHHhhcCCEEEEecCCCChh---hHHHHHHHhCCcEEechhHHHHHHHhcCCCC----CCCccceeEEEeecCCCCcchH
Q 004952 416 FSSFLNGATLALYQGSPLER---SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE----GLDWTKIRSFASTGETSNVDDD 488 (722)
Q Consensus 416 ~~~L~~G~~lv~~~~~~~~~---~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~----~~~l~~Lr~i~~~Ge~l~~~~~ 488 (722)
+.+|..|+++++.+...++. .+++.++++++|++.++|++++.|.+..... ..++++||.+++||+++++++.
T Consensus 284 ~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~ 363 (624)
T PRK12582 284 NGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLY 363 (624)
T ss_pred HHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHH
Confidence 77899999999976444433 4567788999999999999999887642211 2346899999999999999998
Q ss_pred HHHHhhc----c-CCcccccccccccccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----
Q 004952 489 LWLSSKA----W-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL----- 558 (722)
Q Consensus 489 ~~~~~~~----~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v----- 558 (722)
+++.+.+ + +++++|.||+||++.++..... .....+++|+|++|++++|+ |.|+. |||+|
T Consensus 364 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~-------~~G~~--GEl~vrg~~v 433 (624)
T PRK12582 364 ERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW-DTERVGLIGLPLPGVELKLA-------PVGDK--YEVRVKGPNV 433 (624)
T ss_pred HHHHHHHHhhcCCCceEEeccccccccceeecccC-CCCCCCCCCcCCCCcEEEEc-------cCCCc--eEEEEECCcc
Confidence 8887652 1 3579999999999865442222 23456789999999999985 45764 99998
Q ss_pred ecccCCCccccccccccccceeccccCCCceecccCceEEE-e---cCCcEEEEeecCCeeec-CceeechHHHH--HHH
Q 004952 559 FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR-T---VGGYIIVQGRADDTMNL-GGIKTSSVEIE--RVC 631 (722)
Q Consensus 559 ~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~-~---~dG~l~~~GR~dd~ik~-~G~ri~~~eIE--~~l 631 (722)
..||++ +++.|++.|.. ++||+|||+|++ | +||+|+|+||+||+||+ +|++|+|.+|| .++
T Consensus 434 ~~GY~~------~p~~t~~~f~~------dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l 501 (624)
T PRK12582 434 TPGYHK------DPELTAAAFDE------EGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVA 501 (624)
T ss_pred cccccC------CccchhhhcCc------cCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHH
Confidence 244554 56677777753 239999999998 4 56999999999999996 69999999885 566
Q ss_pred hccCCCcceeEEEeecCCCCCceEEEEEEEecC----------CC----CCCHHHHHHHHHHHHHhhc--------CC-C
Q 004952 632 DQADESILETAAISVSPAGGGPEVLVIFVVLKK----------GF----TSQPDKLKMIFSKAIQSKL--------NP-L 688 (722)
Q Consensus 632 ~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~----------~~----~~~~~~l~~~l~~~l~~~~--------~p-~ 688 (722)
.+||.|.+|+|++.+++.. .+.|++.. +. ..+.++++++++++|..+. .| +
T Consensus 502 -~~~p~V~~a~VvG~~~~~~-----g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 575 (624)
T PRK12582 502 -ACSPVIHDAVVAGQDRAFI-----GLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIAR 575 (624)
T ss_pred -hcCcchheEEEEcCCCCcE-----EEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEE
Confidence 4899999999999876543 34443321 11 1234678888888888876 77 5
Q ss_pred eeecCCCC------CCCCchhhHHHHHHHHhhhhhh
Q 004952 689 FKVVPEFP------RTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 689 ~~~v~~lP------~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
+.+++++| +|++||+.|++..+.|++++++
T Consensus 576 ~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ 611 (624)
T PRK12582 576 ALLMTEPPSIDAGEITDKGYINQRAVLERRAALVER 611 (624)
T ss_pred EEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHH
Confidence 66777776 5677888899999999988875
No 111
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2.6e-58 Score=508.90 Aligned_cols=428 Identities=22% Similarity=0.257 Sum_probs=350.8
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccc
Q 004952 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (722)
Q Consensus 211 TY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (722)
||+||.++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 8999999999999999999 999999999999999999999999999999999999999999999999999999999874
Q ss_pred hhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCC
Q 004952 290 ILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369 (722)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG 369 (722)
... +.+ ....+.++...... ..........+++++++|||||||
T Consensus 81 ~~~--~~~------------------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG 124 (436)
T TIGR01923 81 LEE--KDF------------------------------QADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTG 124 (436)
T ss_pred ccc--cce------------------------------eecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCC
Confidence 310 000 00011111111100 001122345689999999999999
Q ss_pred CCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEE
Q 004952 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (722)
Q Consensus 370 ~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (722)
.||+|+++|+++...+.+....++++++|++++..|+.|..++..++.++..|+++++.+.. ..+++.|+++++|++
T Consensus 125 ~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 125 KPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHI 201 (436)
T ss_pred CCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEE
Confidence 99999999999998888888889999999999999999998888889999999999998642 388999999999999
Q ss_pred echhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccc
Q 004952 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529 (722)
Q Consensus 450 ~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~ 529 (722)
.++|++++.|.+.... .+++|.+++|||++++++.+++... +++++|.||+||++..++...........++|+
T Consensus 202 ~~~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 275 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARPDVGR 275 (436)
T ss_pred EeHHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccccCCCc
Confidence 9999999999886432 2789999999999999988877653 788999999999987554443322222234899
Q ss_pred cCCCceEEE-ECCCCCcCCCCCCccceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCC
Q 004952 530 ATMTAGLVI-LDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGG 603 (722)
Q Consensus 530 p~~~~~~~v-ld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG 603 (722)
|+++++++| .|+.+ + .||+++. .||++ +++.+...+ +.+||+|||+|++++||
T Consensus 276 ~~~~~~~~i~~~~~~------~--~Gel~v~~~~~~~gy~~------~~~~~~~~~-------~~~~~~TGD~~~~~~dg 334 (436)
T TIGR01923 276 PLAGREIKIKVDNKE------G--HGEIMVKGANLMKGYLY------QGELTPAFE-------QQGWFNTGDIGELDGEG 334 (436)
T ss_pred cCCCcEEEEEeCCCC------C--ceEEEEECCccchhhCC------Chhhhhhhh-------cCCCeeccceEEEcCCC
Confidence 999999999 44332 3 4999983 34443 223333222 22499999999999999
Q ss_pred cEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHh
Q 004952 604 YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 683 (722)
Q Consensus 604 ~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~ 683 (722)
.+++.||.||+||++|.+|++.|||.+|. .+|.|.+++|++.++...+ ..++++++++++ .+..++.+++++.|+.
T Consensus 335 ~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~--~~~~~l~~~l~~~l~~ 410 (436)
T TIGR01923 335 FLYVLGRRDDLIISGGENIYPEEIETVLY-QHPGIQEAVVVPKPDAEWG-QVPVAYIVSESD--ISQAKLIAYLTEKLAK 410 (436)
T ss_pred CEEEeccccCeEEeCCEeeCHHHHHHHHH-hCCCeeEEEEeCCcchhcC-CeeEEEEEECCC--CCHHHHHHHHHHhhhC
Confidence 99999999999999999999999999995 8999999999998877666 788999988753 5678999999999999
Q ss_pred hcCCC-eeecCCCCCCCCchhhHHHH
Q 004952 684 KLNPL-FKVVPEFPRTASNKLLRRVL 708 (722)
Q Consensus 684 ~~~p~-~~~v~~lP~t~~GKvdR~~L 708 (722)
+++|. ++.+++||+|++||++|++|
T Consensus 411 ~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 411 YKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCCCeEEEEecCCCCCCCCceecccC
Confidence 99995 55899999999999999875
No 112
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-58 Score=522.69 Aligned_cols=485 Identities=18% Similarity=0.195 Sum_probs=353.5
Q ss_pred CCCCCceEEEEecCCCC-CCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCD-ESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~-~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
..+|+++|+++.+..++ .+..+++||+||.++++++|++|.+.-++||+|+++++|++++++++|||+++|++++|+++
T Consensus 12 ~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~~ 91 (578)
T PRK05850 12 SLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGLEYIVAFLGALQAGLIAVPLSV 91 (578)
T ss_pred hcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccHHHHHHHHHHcCceEEecCC
Confidence 68899999997542110 11235899999999999999999988337999999999999999999999999999999997
Q ss_pred ---CCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcC---CC-cEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 266 ---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PL-KAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 266 ---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
..+.+++.+++++++++++++++.... ......... .. .++.+.. . ++..
T Consensus 92 ~~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~- 148 (578)
T PRK05850 92 PQGGAHDERVSAVLRDTSPSVVLTTSAVVD------DVTEYVAPQPGQSAPPVIEVDL-------------L---DLDS- 148 (578)
T ss_pred CCccchHHHHHHHHHhcCCCEEEEcHHHHH------HHHHHHhhcccccccceEeecc-------------c---cccc-
Confidence 457899999999999999999875421 111111100 00 0111100 0 0000
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhh-cC-----CCCCCEEEEecCccccchh
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-ID-----LKVGDVYCWPTNLGWVMGP 412 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~-~~-----~~~~d~~l~~~~~~~~~~~ 412 (722)
.. ........+++++|++|||||||.||||+++|+++.+.+...... +. ...++++++..|+.|+.++
T Consensus 149 -~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 222 (578)
T PRK05850 149 -PR-----GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGL 222 (578)
T ss_pred -CC-----ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchh
Confidence 00 001123456899999999999999999999999998776554332 22 3568899999999999997
Q ss_pred -HHHHHHhhcCCEEEEecCC---CChhhHHHHHHHhCCcEEechhHH-HHHHHhcC---CCCCCCccceeEEEeecCCCC
Q 004952 413 -VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSL-VKAWRNTN---CLEGLDWTKIRSFASTGETSN 484 (722)
Q Consensus 413 -~~~~~~L~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~-l~~l~~~~---~~~~~~l~~Lr~i~~~Ge~l~ 484 (722)
..++.+++.|+++++.+.. .++..++++++++++++.. +|++ +..+.... .....+++++|.+++||++++
T Consensus 223 ~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~ 301 (578)
T PRK05850 223 VLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFSA-APNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVH 301 (578)
T ss_pred HHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEEe-CCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCC
Confidence 5688999999999998642 2678899999999998664 5554 44443321 112346789999999999999
Q ss_pred cchHHHHHhhcc-----CCcccccccccccccccccCCcCCc------------------------CccccccccCCCce
Q 004952 485 VDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP------------------------QAFGAFSTATMTAG 535 (722)
Q Consensus 485 ~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~------------------------~~~~~iG~p~~~~~ 535 (722)
+.+.+++.+.++ +..+++.||+||++..+.......+ ....++|.|. +.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~ 380 (578)
T PRK05850 302 PATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPT 380 (578)
T ss_pred HHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCE
Confidence 999888877652 3468999999998754333211100 0112345554 578
Q ss_pred EEEECC-CCCcCCCCCCccceEEEe-----cccCCCccccccccccccceec---ccc--CCCceecccCceEEEecCCc
Q 004952 536 LVILDE-CGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRG---MPM--YKGMCLRRHGDIIKRTVGGY 604 (722)
Q Consensus 536 ~~vld~-~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~---~p~--~~g~r~yrTGDl~~~~~dG~ 604 (722)
++|+|+ +++++|.|+. |||++. .||++ +++.|++.|.. +|. ....+||+|||+|+++ ||+
T Consensus 381 ~~ivd~~~~~~~~~g~~--Gel~v~g~~~~~gY~~------~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~ 451 (578)
T PRK05850 381 VRIVDPDTCIECPAGTV--GEIWVHGDNVAAGYWQ------KPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGE 451 (578)
T ss_pred EEEEcCCCCcCCCCCCE--EEEEEecCcccccccC------ChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCE
Confidence 999994 5889999985 999993 35554 66677777753 121 1123599999999997 999
Q ss_pred EEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCH------HHHHHHHH
Q 004952 605 IIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQP------DKLKMIFS 678 (722)
Q Consensus 605 l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~------~~l~~~l~ 678 (722)
++|+||+||+||++|++|+|.|||++|. .||.+ +++|++++++ .+ +.++++|+++++...+. .++++.+.
T Consensus 452 l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~~-~~~v~~v~~~-~~-~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~ 527 (578)
T PRK05850 452 LFIVGRIKDLLIVDGRNHYPDDIEATIQ-EITGG-RVAAISVPDD-GT-EKLVAIIELKKRGDSDEEAMDRLRTVKREVT 527 (578)
T ss_pred EEEEcccccEEEECCeecCHHHHHHHHH-HhcCC-cEEEEEecCC-Cc-eEEEEEEEeccccCcchhhhhhHHHHHHHHH
Confidence 9999999999999999999999999995 89985 5788888876 55 88999999887543332 24555555
Q ss_pred HHHHh--hcCCC-eeec--CCCCCCCCchhhHHHHHHHHhhh
Q 004952 679 KAIQS--KLNPL-FKVV--PEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 679 ~~l~~--~~~p~-~~~v--~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
+.++. ++.|. ++++ ++||+|++|||+|++|++.+.+.
T Consensus 528 ~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 528 SAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 55544 23453 4444 58999999999999999987653
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.4e-56 Score=502.80 Aligned_cols=472 Identities=18% Similarity=0.153 Sum_probs=358.2
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCC
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p 265 (722)
...|+.+|+...+. .+.+||.||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+++
T Consensus 13 ~~~~~~~~~~~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~ 86 (545)
T PRK07768 13 RTSPRGMVTGEPDA------PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQ 86 (545)
T ss_pred hCCCcceEEecCCC------ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCC
Confidence 56799998865443 24899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHH-------HHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 266 SFAAREI-------ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 266 ~~~~~~l-------~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
..+.+++ ..+++.++++.+++++......+ .+ ... ....+.++++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------~~-~~~------------------~~~~~~~~~l~~~ 141 (545)
T PRK07768 87 PTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAP------VL-EEK------------------GIRVLTVADLLAA 141 (545)
T ss_pred CCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhh------hh-ccc------------------CCceeehhhhccc
Confidence 9887655 44677789999999874321110 00 000 0112334444432
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCC-CEEEEecCccccchhHH-HH
Q 004952 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG-DVYCWPTNLGWVMGPVI-LF 416 (722)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~-~~ 416 (722)
... ......++++++++|||||||.||||+++|+++...+......+++.++ |++++..|+.|+.+... ++
T Consensus 142 ~~~-------~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 142 DPI-------DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred CCC-------CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 111 1223457999999999999999999999999998888877777888876 89999999999999854 56
Q ss_pred HHhhcCCEEEEecCC---CChhhHHHHHHHhCCcEEechhHHHHHHHhcC----CCCCCCccceeEEEeecCCCCcchHH
Q 004952 417 SSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CLEGLDWTKIRSFASTGETSNVDDDL 489 (722)
Q Consensus 417 ~~L~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~----~~~~~~l~~Lr~i~~~Ge~l~~~~~~ 489 (722)
.++..|+++++.+.. .++..+.++++++++|++..+|.++..+.... .....++++||.++++|+++++...+
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~ 294 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVE 294 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHH
Confidence 789999999988642 25667889999999999988888877665421 11246688999999999999999988
Q ss_pred HHHhh---cc--CCcccccccccccccccccCCcCC-------------------------cCccccccccCCCceEEEE
Q 004952 490 WLSSK---AW--YNAIIESCGGTELSSAYIQGSLLQ-------------------------PQAFGAFSTATMTAGLVIL 539 (722)
Q Consensus 490 ~~~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~~-------------------------~~~~~~iG~p~~~~~~~vl 539 (722)
++.+. ++ ...+++.||+||++..++...... .....++|+|++++.++|+
T Consensus 295 ~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~ 374 (545)
T PRK07768 295 DLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVV 374 (545)
T ss_pred HHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEE
Confidence 87653 21 235999999999986543322110 1123579999999999999
Q ss_pred CCCCCcCCCCCCccceEEEe-----cccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCe
Q 004952 540 DECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDT 614 (722)
Q Consensus 540 d~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ 614 (722)
|+++++++.|+. |||++. +||++ ...+...+ . +..||+|||+|++++||.++++||+||+
T Consensus 375 ~~~~~~~~~g~~--Gel~v~~~~~~~gy~~-------~~~~~~~~----~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~ 439 (545)
T PRK07768 375 DEDGQVLPPRGV--GVIELRGESVTPGYLT-------MDGFIPAQ----D--ADGWLDTGDLGYLTEEGEVVVCGRVKDV 439 (545)
T ss_pred CCCCCCCCCCCE--EEEEEccCcccccccC-------CCCCcccc----c--CCCeeeccceEEEecCCEEEEEccccce
Confidence 999999999985 999983 34443 22111111 1 2349999999999999999999999999
Q ss_pred eecCceeechHHHHHHHhccCCCcceeEEEeec--CCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhh--cCCC-
Q 004952 615 MNLGGIKTSSVEIERVCDQADESILETAAISVS--PAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSK--LNPL- 688 (722)
Q Consensus 615 ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~--~~~~g~~~l~a~vv~~~~~~-~~~~~l~~~l~~~l~~~--~~p~- 688 (722)
||++|.+|++.|||++|. .||+|.+++|+++. +...+ +.++.++....... ....++.+++++.++.+ ..|.
T Consensus 440 i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~ 517 (545)
T PRK07768 440 IIMAGRNIYPTDIERAAA-RVEGVRPGNAVAVRLDAGHSR-EGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRN 517 (545)
T ss_pred EEECCEecCHHHHHHHHH-hCcccccceEEEEEecCCCCc-eEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 999999999999999995 89999998877664 33333 45555555443211 12245777888887766 4674
Q ss_pred eeecC--CCCCCCCchhhHHHHHHHHh
Q 004952 689 FKVVP--EFPRTASNKLLRRVLRDQIK 713 (722)
Q Consensus 689 ~~~v~--~lP~t~~GKvdR~~L~~~~~ 713 (722)
+.+++ +||+|++||++|+.|+++|.
T Consensus 518 v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 518 VVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred EEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 33554 89999999999999999875
No 114
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=5.1e-56 Score=485.91 Aligned_cols=485 Identities=22% Similarity=0.213 Sum_probs=359.0
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++..+|+.+|+.+... +.++.+||+|+.+++.++|+.|++. ++.||+|+|++.|+++|+++.+||+.+|++.||+
T Consensus 25 ~~~~~~~~~a~~~~~~----~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~ 100 (613)
T COG1022 25 RVKDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPI 100 (613)
T ss_pred HhhcCCcceeEeeecC----CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEec
Confidence 3467888889987664 5778999999999999999999999 9779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCc---EEEEc-CCCCC--CCCC----CCCCCCCHH
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK---AIVLP-AIGND--VGIP----LREQDLSWK 333 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~--~~~~----~~~~~~~~~ 333 (722)
+++.+++.++++|++++++++++++... .+....+...++.. ...+. ..... .... ...+...+
T Consensus 101 y~t~~~~~~~~iL~~se~~~i~~e~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (613)
T COG1022 101 YSTSTPEQLAYILNESESKVIFVENQEL-----LDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF- 174 (613)
T ss_pred CCCCCHHHHHHHHhcCCceEEEecchHH-----HHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh-
Confidence 9999999999999999999999997421 12222222211110 00000 00000 0000 00011111
Q ss_pred HHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcC-CCCCCEEEEecCccccchh
Q 004952 334 DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGP 412 (722)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~ 412 (722)
. ..... .........++|+|.|+|||||||.|||||+||+|+++.+......+. ++++|++++++|++|.+..
T Consensus 175 ~-~~~~~-----~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 175 L-IDSAG-----LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred h-hcccc-----cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHH
Confidence 0 11111 111124567899999999999999999999999999999999999997 9999999999999999988
Q ss_pred HH-HHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhc--------CC-------------------
Q 004952 413 VI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NC------------------- 464 (722)
Q Consensus 413 ~~-~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~--------~~------------------- 464 (722)
.. ....+..|+++... .++..+.+.+++.++|+++.+|.+++.+.+. ..
T Consensus 249 ~~~~~~~~~~g~~~~~~---~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~ 325 (613)
T COG1022 249 AFEGGLALYGGVTVLFK---EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISR 325 (613)
T ss_pred HHHHHHHhhcceEEEec---CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 54 44455555555443 4678999999999999999999999887432 00
Q ss_pred ----------------------CCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcC
Q 004952 465 ----------------------LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQ 522 (722)
Q Consensus 465 ----------------------~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~ 522 (722)
.+... .++|.+++||.++++++..+++.. ++++.++||+|||+...+..++. ..
T Consensus 326 ~~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~~-~~ 401 (613)
T COG1022 326 ALLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPPD-RF 401 (613)
T ss_pred hhcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEcccc-Cc
Confidence 00111 389999999999999999999876 68999999999999866655443 35
Q ss_pred ccccccccCCCceEEEECCCCCcCCCCCCccceEEE-ecccCCCccccccccccccceeccccCCCceecccCceEEEec
Q 004952 523 AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTV 601 (722)
Q Consensus 523 ~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~ 601 (722)
..+++|.|+|+++++|.|+ |||+| +|..+.+ ||.+++.|++.|..|. ||+|||+|.+|+
T Consensus 402 ~~gtvG~p~p~~evKI~d~------------GEilVRG~~Vm~G--Yyk~pe~Taeaf~~DG------Wf~TGDlg~~d~ 461 (613)
T COG1022 402 VLGTVGKPLPGIEVKIADD------------GEILVRGPNVMKG--YYKNPEATAEAFTEDG------WFRTGDLGELDE 461 (613)
T ss_pred ccCCcCCcCCCceEEEccC------------ceEEEecchhcch--hcCChHHHhhhccccC------CcccCceeEEcC
Confidence 6789999999999999994 89998 3333331 3448889999998654 999999999999
Q ss_pred CCcEEEEeecCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCC------------C
Q 004952 602 GGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT------------S 668 (722)
Q Consensus 602 dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~------------~ 668 (722)
+|+|.++||++|.||. +|.+|+|..||+.+ +.+|.|.+++|++ .+. ..+.|.|++..+.- .
T Consensus 462 ~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l-~~~~~I~qi~vvg-~~k----~~~~AlIvp~~~~l~~~a~~~~~~~~~ 535 (613)
T COG1022 462 DGYLVITGRKKELIKLSNGKNIAPEPIESKL-AKSPLIEQICVVG-DDK----KFLVALIVPDFDALEKWAESLNKVISA 535 (613)
T ss_pred CCcEEEeecccceEECCCCcccChHHHHHHH-hcCCCeeEEEEEe-cCC----cceEEEEeCCHHHHHHHHHhccccccC
Confidence 9999999999999996 79999999999999 5999999999998 332 57899999865210 0
Q ss_pred CH------HHHHHHHHHHHHh-----hcCC---Cee-ecCCCC-----CCCCchhhHHHHHHHHhhhhhh
Q 004952 669 QP------DKLKMIFSKAIQS-----KLNP---LFK-VVPEFP-----RTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 669 ~~------~~l~~~l~~~l~~-----~~~p---~~~-~v~~lP-----~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
+. .++.+....++-. .+.. .+. ...++. .|++=|+.|+.+.+.+..+++.
T Consensus 536 ~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~~ 605 (613)
T COG1022 536 SREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIEA 605 (613)
T ss_pred CHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHHH
Confidence 11 1122222221111 0001 122 222333 6899999999999988877654
No 115
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4.9e-53 Score=454.28 Aligned_cols=506 Identities=16% Similarity=0.121 Sum_probs=375.8
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++..|+.+++-+.......+.++.+||.|..+++..+|..|+.. +++++.|||+.-|++||+++..||...|++.|||.
T Consensus 85 ~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplY 164 (691)
T KOG1256|consen 85 VEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLY 164 (691)
T ss_pred hhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecc
Confidence 36889999997765311246788999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhh--cCCCcEEEEcCCCCC-CCC----CCCCCCCCHHHHhc
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG--AAPLKAIVLPAIGND-VGI----PLREQDLSWKDFLS 337 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~ 337 (722)
...+++.+.++++++.+.+++++++- ....+..... ..+....++...+.. ... .......+|+++.+
T Consensus 165 dTlg~ea~~~Ii~~~e~~iv~vd~~~-----k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~ 239 (691)
T KOG1256|consen 165 DTLGAEAVHYIINHAEISIVFVDNAK-----KAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDEFEE 239 (691)
T ss_pred cCCCHHHHHHHHHhcceeEEEEeCHH-----HHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHHHHh
Confidence 99999999999999999999999642 1111111111 133332222222211 111 11223688999998
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHH---hhhh---cCCCCCCEEEEecCccccch
Q 004952 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAH---IDLKVGDVYCWPTNLGWVMG 411 (722)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~---~~~~---~~~~~~d~~l~~~~~~~~~~ 411 (722)
.+... ....+ .+..|+|.|.|+|||||||.|||||+||+|++..+.. .... ......|++++++|++|.+-
T Consensus 240 lG~~~--~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~e 316 (691)
T KOG1256|consen 240 LGKKN--QRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFE 316 (691)
T ss_pred hcccc--cCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHH
Confidence 87541 11222 4678899999999999999999999999999885542 1111 12334699999999999999
Q ss_pred hHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhc-----------------------C---CC
Q 004952 412 PVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT-----------------------N---CL 465 (722)
Q Consensus 412 ~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~-----------------------~---~~ 465 (722)
...-...+..|+++.++.+ |+..+.+.|++.++|++.++|.+|..+.+. . ..
T Consensus 317 r~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~ 394 (691)
T KOG1256|consen 317 RVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLM 394 (691)
T ss_pred HHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhh
Confidence 8666666799999999975 556788889999999999999999877532 0 00
Q ss_pred CCCC-------------------ccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCcccc
Q 004952 466 EGLD-------------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGA 526 (722)
Q Consensus 466 ~~~~-------------------l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~ 526 (722)
.... -.++|.+++|++++++++...++..+ +++++++||+|||++..+...+... ..++
T Consensus 395 ~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~~~d~-~lgs 472 (691)
T KOG1256|consen 395 KGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTLPGDN-VLGS 472 (691)
T ss_pred CCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEeccCCCC-CCCC
Confidence 0000 03789999999999999999988765 6899999999999955554444443 7799
Q ss_pred ccccCCCceEEEEC-CCCCcCCCCCCccceEEE-ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCc
Q 004952 527 FSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGY 604 (722)
Q Consensus 527 iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~ 604 (722)
+|.|+|+++++++| ++.+.-+.|.. ||||| ++..+.+ ||.+++.|++.|..+. |++|||+|+|+++|.
T Consensus 473 vG~p~p~~~vKL~dvpe~ny~a~~~~--GEIcirG~~Vf~G--YyK~p~~T~e~ideDG------WLhTGDiG~~~p~G~ 542 (691)
T KOG1256|consen 473 VGPPVPGNEVKLVDVPEMNYDADGSK--GEICVRGPNVFMG--YYKDPEKTAEAIDEDG------WLHTGDIGEWDPNGT 542 (691)
T ss_pred cCCcccCceEEEechHHhCcCcCCCc--ceEEEecchhcee--ccCChHHHhhhhcccc------ccccccceeECCCcc
Confidence 99999999999988 45555555553 99999 4444432 3447889999997654 999999999999999
Q ss_pred EEEEeecCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCC--------C--HH--
Q 004952 605 IIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS--------Q--PD-- 671 (722)
Q Consensus 605 l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~--------~--~~-- 671 (722)
|.+.||.++.+|. .|+.|.|..||++.. ..+-|.+.+|.+.... ..|+|.|+++..... . .+
T Consensus 543 l~IidRkK~ifklaqGEyVaPe~IEniy~-~~~~V~qi~V~g~s~~----~~LvaiVvpd~e~~~~~a~~~~~~~~~eel 617 (691)
T KOG1256|consen 543 LKIIDRKKNIFKLAQGEYVAPEKIENIYK-RSLPVQQIFVLGDSLR----SFLVAIVVPDPEVLKSWAAKDGVKGTFEEL 617 (691)
T ss_pred EEEEecccceEEcCCCCccChHHHHHHHh-cCCceEEEEEECCcch----hcEEEEEecChhhchhhHHHccCchhHHHH
Confidence 9999999999997 699999999999985 7788988888875432 679999999653211 0 01
Q ss_pred ----HHHHHH----HHHHHhhcCCCee-----ec-------CCCCCCCCchhhHHHHHHHHhhhhhh
Q 004952 672 ----KLKMIF----SKAIQSKLNPLFK-----VV-------PEFPRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 672 ----~l~~~l----~~~l~~~~~p~~~-----~v-------~~lP~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
.+++.+ .+.....-...+. .+ +.==+||+-|+.|..|.+.|+.++++
T Consensus 618 c~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~ 684 (691)
T KOG1256|consen 618 CRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDE 684 (691)
T ss_pred hcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHH
Confidence 111111 1111111111111 22 22236899999999999999999875
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-52 Score=429.97 Aligned_cols=494 Identities=22% Similarity=0.209 Sum_probs=390.4
Q ss_pred cCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
||+++|+++|+++.+.. +++||+|++++++++|+.|..+ ++.||.||++|+|+++++...||.+|+|++...|
T Consensus 86 ~vrr~p~k~aii~~~~~------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~i 159 (649)
T KOG1179|consen 86 QVRRQPDKPAIIYEGPF------QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFI 159 (649)
T ss_pred HHHhCCCccEEEEeCCC------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeee
Confidence 56899999999998852 2999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCC-CcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
+++...+-|.+.+.-++++.+|++.++.. ...++.+... ..+.++..... ...++..++...++.....
T Consensus 160 NtNlR~~~LlHsi~~s~aralv~~~el~~------~~~e~~~~l~~~~i~~~~~~~~----~~~~g~~~L~~~l~~~~~~ 229 (649)
T KOG1179|consen 160 NTNLRGEPLLHSITVSGARALVVGPELLN------ALEEILPLLIKNGIHVFSLGPT----SVPDGIESLLAKLSAAPKH 229 (649)
T ss_pred ccccccchhhhhhhhcCceEEEECHHHHH------HHHhcchhhhhccceEEecCCC----CCCchHHHHHHhhcccccC
Confidence 99999999999999999999999986531 1111111111 11222221111 1122233333334333321
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhc
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~ 421 (722)
+.+ ..........++++.||||||||.||..+++|.-+..........++++++|+++...|+.|.++. ..+..++..
T Consensus 230 ~vp-~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~ 308 (649)
T KOG1179|consen 230 PVP-VSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLH 308 (649)
T ss_pred CCC-cccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhc
Confidence 111 122334556789999999999999999999999888777767778999999999999999998886 779999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccc
Q 004952 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (722)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~ 501 (722)
|+|+|+-. .++...+|+.+.+|+||++.-.--+.+.|++.+......-..+|..+- --+.++.++.+.++++..+|.
T Consensus 309 GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~G--NGLR~diW~~Fv~RFg~~~Ig 385 (649)
T KOG1179|consen 309 GATVVLRK-KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYG--NGLRPDIWQQFVKRFGIIKIG 385 (649)
T ss_pred CceEEEec-ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEec--CCCCchHHHHHHHHcCCCeEE
Confidence 99999976 677889999999999999999999999999987765555567887764 447899999999999877899
Q ss_pred ccccccccccccccCCcCCcCcccccccc------CCCceEE---------EECCCC--CcCCCCCCccceEEE------
Q 004952 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTA------TMTAGLV---------ILDECG--VPYPDDQPCVGEVGL------ 558 (722)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p------~~~~~~~---------vld~~~--~~~p~G~~giGel~v------ 558 (722)
+.||+||..+..+... ...+.+|+- +--+++. |-|++| .+|++|++ |.++-
T Consensus 386 E~YgaTEgn~~~~N~d----~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEp--GlLv~~i~~k~ 459 (649)
T KOG1179|consen 386 EFYGATEGNSNLVNYD----GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEP--GLLVGKIVQKN 459 (649)
T ss_pred EEeccccCcceeeeec----CccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCC--ceEEEEeccCC
Confidence 9999999876443321 122333331 1112222 233333 36788998 53331
Q ss_pred ----ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhcc
Q 004952 559 ----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQA 634 (722)
Q Consensus 559 ----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~ 634 (722)
..||.+ +...|+.....|-|.+|+-||.|||+-.+|+.|++||.+|.-|.+...|++|+..|+|.+| ..
T Consensus 460 P~~~F~GY~g------~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l-~~ 532 (649)
T KOG1179|consen 460 PLRSFLGYAG------PKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVL-SA 532 (649)
T ss_pred chhhhccccC------chhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHH-hh
Confidence 124444 3567888888888888999999999999999999999999999999999999999999999 58
Q ss_pred CCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCCee-ecCCCCCCCCchhhHHHHHHH
Q 004952 635 DESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFK-VVPEFPRTASNKLLRRVLRDQ 711 (722)
Q Consensus 635 ~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~~~-~v~~lP~t~~GKvdR~~L~~~ 711 (722)
..++.|+.|.|+.-+...+..-.|.|+.+++.+.+.+.+-+.+++.||+|..|+|+ ++++|++|.+=|..+..|.+.
T Consensus 533 ~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 533 LDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred hccccceeEEEEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 99999999999987665535667888888888899999999999999999999988 899999999999999999775
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3.6e-53 Score=465.09 Aligned_cols=391 Identities=25% Similarity=0.279 Sum_probs=302.0
Q ss_pred cCCCCCCceEEEE-ecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEe
Q 004952 185 HRRKEDNTVAIVW-REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (722)
Q Consensus 185 ~a~~~pd~~Al~~-~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vp 262 (722)
+|+++||++|+++ ... .+||+||+++++++|..|++. +++||+|+++++|++++++++|||+++|++++|
T Consensus 4 ~a~~~pd~~a~~~~~~~--------~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 4 QAQRYPDRIALIDDEGR--------SLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHSTTSEEEEETTTE--------EEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred HHhhCCCceEEEECCCE--------EEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccc
Confidence 4578999999999 555 999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeccchhcCCcccc--chHHHhhcCC--CcEEEEcCCCCCCCCCCCCCCCCHHHHhcc
Q 004952 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFP--LYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (722)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (722)
++|.++.+++.++++.++++++|+ .+.. +... .+........ ...+.+..... .....+...
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~-~~~~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 141 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIIT-SEAV---DSEPLKKLKSIFKQEDPSSSIIILDRDDL----------PKKEALKSA 141 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEE-CHHH---SCHHHHHHHHHHTTSTTTEEEEEESHSSC----------TTCHHHHHH
T ss_pred cccccccccccccccccceeEEEE-eccc---cccccccchhhhccccccccccccccccc----------ccccccccc
Confidence 999999999999999999999997 1000 0111 1111112111 12233321111 000111110
Q ss_pred cCCCCCCCCCCCcc-CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhh--hhcCCCCCCEEEEecCccccchh-HH
Q 004952 339 VDYHPRPNYYSPVY-NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--AHIDLKVGDVYCWPTNLGWVMGP-VI 414 (722)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~-~~ 414 (722)
... ...... ..++++++++|||||||.||+|.++|+++++.+.... ..++++ |+++++.|++|..++ ..
T Consensus 142 ~~~-----~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~ 214 (417)
T PF00501_consen 142 SLS-----DEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISA 214 (417)
T ss_dssp HHC-----HCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHH
T ss_pred ccc-----cccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccc
Confidence 000 000000 0569999999999999999999999999988877653 223333 699999999999999 88
Q ss_pred HHHHhhcCCEEEEecCCCC--hhhHHHHHHHhCCcEEechhHHHHHHHhcCCC----CCCCccceeEEEeecCCCCcchH
Q 004952 415 LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----EGLDWTKIRSFASTGETSNVDDD 488 (722)
Q Consensus 415 ~~~~L~~G~~lv~~~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~----~~~~l~~Lr~i~~~Ge~l~~~~~ 488 (722)
++.++..|+++++++.... +..+++.|+++++|++.++|++++.|++.... ...++++||.+++||+++++++.
T Consensus 215 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 294 (417)
T PF00501_consen 215 LLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLL 294 (417)
T ss_dssp HHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHH
T ss_pred ccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhc
Confidence 9999999999999985432 46688999999999999999999999884322 23578899999999999999999
Q ss_pred HHHHhhccCCcccccccccccccccccCC-cCCcCccccccccCCCceEEEECCC-CCcCCCCCCccceEEEe-----cc
Q 004952 489 LWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGLF-----PL 561 (722)
Q Consensus 489 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~-~~~~~~~~~iG~p~~~~~~~vld~~-~~~~p~G~~giGel~v~-----~~ 561 (722)
+++.+.++..++++.||+||++..++... .......+++|.|+++++++|+|++ ++++|.|+. |||++. .|
T Consensus 295 ~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~--Gei~i~~~~~~~g 372 (417)
T PF00501_consen 295 RRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEP--GEIVIRGPNVFSG 372 (417)
T ss_dssp HHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSE--EEEEEESTTSBSE
T ss_pred cccccccccccceecccccccceeeeccccccccccccccccccccccccccccccccccccccc--ccccccCCcccee
Confidence 99998876668999999999998765432 2222355789999999999999987 999999995 999994 34
Q ss_pred cCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeecC
Q 004952 562 YLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 618 (722)
Q Consensus 562 y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~ 618 (722)
|++ +++.+++.|.. ++||+|||+|++|+||+|+++||.||+||+|
T Consensus 373 y~~------~~~~~~~~~~~------~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 373 YYN------DPELTAEAFID------DGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp ETT------BHHHHHHHEET------TSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eec------ccccccccccc------ccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 443 45677777774 2399999999999999999999999999986
No 118
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-52 Score=428.35 Aligned_cols=488 Identities=18% Similarity=0.170 Sum_probs=367.9
Q ss_pred CccceecHHHHHHHHHHHHHHHHhh-cCCCCE-EEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCce
Q 004952 205 SAVNLMTYKELREQVMLVANALDTM-FSKGDA-IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAK 282 (722)
Q Consensus 205 ~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~-V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~ 282 (722)
+....+||.|+.+++..+|+.|.+. ++++++ |+|+++.+.+|+++.+||++.+...|.+...+..+.|.+-|++++++
T Consensus 85 g~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~ 164 (678)
T KOG1180|consen 85 GDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETEST 164 (678)
T ss_pred cceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccce
Confidence 4567999999999999999999999 997766 99999999999999999999999999999999999999999999999
Q ss_pred EEEeccchhcCCccccchHHHhhcCCCcEEEEcCCC--CCC---CCC----CCCCCCCHHHHhcccCCCCCCCCCCCccC
Q 004952 283 GIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG--NDV---GIP----LREQDLSWKDFLSSVDYHPRPNYYSPVYN 353 (722)
Q Consensus 283 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (722)
.|+|+.... +.+...+..++....++-... ... ... .....++++++.+-+.... .++.+.
T Consensus 165 ~i~T~~~LL------~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P 234 (678)
T KOG1180|consen 165 AIFTDSELL------PKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPP 234 (678)
T ss_pred EEEeCHHHH------HHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCC
Confidence 999998543 333344444444333332221 111 011 1234577889888776522 233444
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhc-CCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~ 432 (722)
.|+|+|+|||||||||.||||+++|.|+++.+....... .+++.|+++.+.|+.|.+-+..=+.++..|+++-..+...
T Consensus 235 ~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~T 314 (678)
T KOG1180|consen 235 KPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLT 314 (678)
T ss_pred CCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcce
Confidence 779999999999999999999999999999888776665 6899999999999999999855568899999987654322
Q ss_pred --Ch-h----hHHHHHHHhCCcEEechhHHHHHHHhcC--------------------------CCCCC-----------
Q 004952 433 --LE-R----SFGKFVQDAGVTVLGTVPSLVKAWRNTN--------------------------CLEGL----------- 468 (722)
Q Consensus 433 --~~-~----~l~~~i~~~~vt~l~~~P~~l~~l~~~~--------------------------~~~~~----------- 468 (722)
|. . .---.+...|+|++.++|+.+..+.+.- .....
T Consensus 315 Ltdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFk 394 (678)
T KOG1180|consen 315 LTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFK 394 (678)
T ss_pred ecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHH
Confidence 11 1 1112456789999999999998765320 00000
Q ss_pred -----CccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCccccccccCCCceEEEEC-CC
Q 004952 469 -----DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-EC 542 (722)
Q Consensus 469 -----~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~ 542 (722)
--.+||.+++||.+|+++..+++...+ .|++.++||.||++...+...+.+ ...+.+|.|++.++++++| ++
T Consensus 395 KIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~d-~~~g~vG~pl~c~eiKLvdw~E 472 (678)
T KOG1180|consen 395 KIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPED-FSTGRVGAPLPCCEIKLVDWEE 472 (678)
T ss_pred HHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChhh-cccccccCCccceEEEEEEhhh
Confidence 013799999999999999998887665 469999999999987655544433 4457899999999999999 33
Q ss_pred CCcCCCCCCccceEEE-----ecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEeecCCeeec
Q 004952 543 GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL 617 (722)
Q Consensus 543 ~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~ 617 (722)
|.--+.+.|--|||++ .+||++ |++.|++.|.. .+|.|||+|||+|+|.+||.|.+++|++|.||.
T Consensus 473 gGY~~~~~PPrGEI~i~G~~vt~gY~k------n~ekT~e~ft~---~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKl 543 (678)
T KOG1180|consen 473 GGYFAKNKPPRGEILIGGPNVTMGYYK------NEEKTKEDFTV---EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKL 543 (678)
T ss_pred cCccCCCCCCCceEEecCCccChhhhC------Chhhhhhhcee---cCCcEEEeccccceecCCCcEEEeechhhhhhh
Confidence 3322222211377777 466665 78889999886 468999999999999999999999999999996
Q ss_pred -CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC--------CCCH---------HHHHHHHHH
Q 004952 618 -GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------TSQP---------DKLKMIFSK 679 (722)
Q Consensus 618 -~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~--------~~~~---------~~l~~~l~~ 679 (722)
+|+.|+++-+|+++ +..|-|...+|.+.... ..+|++||+.++. ..+. .++++.+.+
T Consensus 544 q~GEYIsL~KvEa~l-~s~p~V~NICvyAd~~~----s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k 618 (678)
T KOG1180|consen 544 QNGEYISLGKVEAAL-RSSPYVDNICVYADSNK----SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLK 618 (678)
T ss_pred cccceeehHHHHHHH-hcCcchhheEEeccccc----ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHH
Confidence 89999999999999 59999999888775432 5799999998642 1111 122222222
Q ss_pred H---------HHhhcCCCeeecCCCCCCC-Cc------hhhHHHHHHHHhhhhhh
Q 004952 680 A---------IQSKLNPLFKVVPEFPRTA-SN------KLLRRVLRDQIKHELSV 718 (722)
Q Consensus 680 ~---------l~~~~~p~~~~v~~lP~t~-~G------KvdR~~L~~~~~~~~~~ 718 (722)
. |...-+|.-+.+-..|-|| || |+.|+.+...+..++++
T Consensus 619 ~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~ei~~ 673 (678)
T KOG1180|consen 619 ELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKLKRKEILAAYKKEIDR 673 (678)
T ss_pred HHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHhhHHHHHHHHHHHHHH
Confidence 2 3333355555666777776 34 99999999999998875
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.7e-51 Score=448.91 Aligned_cols=393 Identities=21% Similarity=0.204 Sum_probs=324.5
Q ss_pred cHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEecc
Q 004952 211 TYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (722)
Q Consensus 211 TY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (722)
||.||.+.++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999999 7 99999999999999999999999999999999999999999999999999999999987
Q ss_pred chhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCC
Q 004952 289 FILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368 (722)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGST 368 (722)
........ .......+.. .+......... .........++++++++||||||
T Consensus 81 ~~~~~~~~----------~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTt 132 (408)
T TIGR01733 81 ALASRLAG----------LVLPIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGST 132 (408)
T ss_pred chhhhccc----------cCCceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCC
Confidence 54321111 1111111110 00000000000 00111113568999999999999
Q ss_pred CCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCC--hhhHHHHHHHhCC
Q 004952 369 GEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGV 446 (722)
Q Consensus 369 G~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~--~~~l~~~i~~~~v 446 (722)
|.||+|.++|+++.+.+......+.+.++|+++...|++|..+++.++.++..|+++++++.... +..+.+.++++++
T Consensus 133 G~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (408)
T TIGR01733 133 GRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPV 212 (408)
T ss_pred CCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCc
Confidence 99999999999999988888888899999999999999999999999999999999999876443 6788899999999
Q ss_pred cEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccccccCCc--CCcC--
Q 004952 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQPQ-- 522 (722)
Q Consensus 447 t~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~~~-- 522 (722)
|.+.++|++++.|.+... ..+++||.+++||++++++..+++.+.++++.+++.||+||++.++..... ....
T Consensus 213 t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~ 289 (408)
T TIGR01733 213 TVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRE 289 (408)
T ss_pred eEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCc
Confidence 999999999999988754 457899999999999999999999988876899999999999876542211 1111
Q ss_pred ccccccccCCCceEEEECCCCCcCCCCCCccceEEEe-----cccCCCccccccccccccceeccccCC--CceecccCc
Q 004952 523 AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYK--GMCLRRHGD 595 (722)
Q Consensus 523 ~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~t~~~f~~~p~~~--g~r~yrTGD 595 (722)
...++|+|++++.++|+|+++++++.|+. |||++. .||++ +++.+.+.|..+++.. |.+||+|||
T Consensus 290 ~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~~~~~~~~~~~~~~~~~~~~~TGD 361 (408)
T TIGR01733 290 SPVPIGRPLANTRLYVLDDDLRPVPVGVV--GELYIGGPGVARGYLN------RPELTAERFVPDPFAGGDGARLYRTGD 361 (408)
T ss_pred cccccCcccCCceEEEECCCCCCCCCCCc--eEEEecCccccccccC------ChhhhhcceeeCCCCCCCCceEEECCc
Confidence 26789999999999999999999999985 999983 45554 5667777887766543 445999999
Q ss_pred eEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEE
Q 004952 596 IIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (722)
Q Consensus 596 l~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~v 643 (722)
+|+++++|++++.||.||+||++|++|+|.|||++|. .||.|.+|+|
T Consensus 362 l~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~-~~~~v~~~~v 408 (408)
T TIGR01733 362 LVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALL-RHPGVREAVV 408 (408)
T ss_pred eEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHh-cCcchhhhcC
Confidence 9999999999999999999999999999999999995 9999999875
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-46 Score=404.63 Aligned_cols=316 Identities=18% Similarity=0.197 Sum_probs=262.8
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEe--cC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY--QG 430 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~--~~ 430 (722)
..+++++|++|||||||.||||+++|+++.+........+ ...++++...|+.|..++..++.+++.|++++++ ..
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3468999999999999999999999999988777654443 3557888999999999998888999999999884 34
Q ss_pred CCChhhHHHHHHHhC--CcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccc
Q 004952 431 SPLERSFGKFVQDAG--VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~--vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (722)
..++..+++.+++++ +++...+|+.+..++.... ...+++++|.+++||++++++..+++.+. +++++|.||+||
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE 186 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSE 186 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCc
Confidence 557889999999998 5667778988887766533 23457899999999999999998887753 689999999999
Q ss_pred cccccccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEE-----ecccCCCccccccccccccceeccc
Q 004952 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMP 583 (722)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p 583 (722)
++..+. ..|+|+++++++|.| |++++ .+||++.+. . ..|..
T Consensus 187 ~~~~~~-----------~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~gY~~~~~------~--~~~~~-- 232 (358)
T PRK07824 187 TSGGCV-----------YDGVPLDGVRVRVED-------------GRIALGGPTLAKGYRNPVD------P--DPFAE-- 232 (358)
T ss_pred cCCCcC-----------cCceeCCCCEEEecC-------------CEEEEecCccccccCCCcc------c--ccccC--
Confidence 875321 258999999999843 45554 566665321 1 12221
Q ss_pred cCCCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEec
Q 004952 584 MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLK 663 (722)
Q Consensus 584 ~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~ 663 (722)
+| ||+|||+|++ .||.++++||.||+||++|++|+|.|||++|. .||+|.+|+|++.+++..| +.++++++.+
T Consensus 233 --~g--~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~vv~~~~~~~g-~~~~a~v~~~ 305 (358)
T PRK07824 233 --PG--WFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALA-THPAVADCAVFGLPDDRLG-QRVVAAVVGD 305 (358)
T ss_pred --CC--ceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCcceEEEEecCCCCCc-eEEEEEEEeC
Confidence 12 9999999999 89999999999999999999999999999995 9999999999999998887 8999999887
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhh
Q 004952 664 KGFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 664 ~~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
.+...+.+++++++++.|+.+++|. ++++++||+|++||+||++|++++.+
T Consensus 306 ~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 306 GGPAPTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CCCCcCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 7666778899999999999999995 55899999999999999999998865
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=7.5e-43 Score=416.28 Aligned_cols=468 Identities=12% Similarity=0.052 Sum_probs=326.8
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~ 264 (722)
++++|+++|+..... .+.++.+||+|+.++++++|+.|++. +++||+|+|+++|+++|+++.+||+++|++.||++
T Consensus 437 a~~~pd~~al~~~~~---~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly 513 (1452)
T PTZ00297 437 VTRHSTFRCLGQTSE---SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLV 513 (1452)
T ss_pred HHHCCCCeEEEEecc---CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCC
Confidence 468899999964311 12335899999999999999999999 99999999999999999999999999999999997
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCC-CC-CC--CCCCCCCCHHHHhcccC
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN-DV-GI--PLREQDLSWKDFLSSVD 340 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~ 340 (722)
+ +.+++.+++++++++++|++.... +.+.......-..++++..... .. .. .......+|+++++.+.
T Consensus 514 ~--t~~eL~yIL~~S~akvVfv~~~~l------~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~ 585 (1452)
T PTZ00297 514 G--KGSTMRTLIDEHKIKVVFADRNSV------AAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGR 585 (1452)
T ss_pred C--CHHHHHHHHHhcCCcEEEEchhHH------HHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCc
Confidence 5 467899999999999999986432 1111211111123344421100 00 00 00112456888887653
Q ss_pred CCCCCCCCCCccCCCCCeEEEEc---CCCCCCCCceEEeCChHHHHHHHHhhhhc---CCCCCCEEEEecCccccchhHH
Q 004952 341 YHPRPNYYSPVYNPVDAVVNILF---SSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPVI 414 (722)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~il~---TSGSTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~~ 414 (722)
.. . ........++|++.|+| ||||||.||||++||+|++..+....... ...++|+++.++|++|.++...
T Consensus 586 ~~--~-~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~ 662 (1452)
T PTZ00297 586 LC--P-VPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVF 662 (1452)
T ss_pred cc--C-ccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHH
Confidence 21 1 11123346789999996 99999999999999999998887654422 4567899999999999998766
Q ss_pred HHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcC----CC----------------------CCC
Q 004952 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CL----------------------EGL 468 (722)
Q Consensus 415 ~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~----~~----------------------~~~ 468 (722)
.+.+++.|+++.. .++..+++.|+++++|++.++|.++..+.+.. .. ...
T Consensus 663 ~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~ 738 (1452)
T PTZ00297 663 VLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRR 738 (1452)
T ss_pred HHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7788999999864 25688999999999999999999998765320 00 000
Q ss_pred Cc----------------cceeEEEeecC--CCCcchHHHHHhhccCCcccccccccccccccccCCcCCcCcccccccc
Q 004952 469 DW----------------TKIRSFASTGE--TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA 530 (722)
Q Consensus 469 ~l----------------~~Lr~i~~~Ge--~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p 530 (722)
.. .++|.+++||. +++..+ .. +.+++.+||.||+.. ..... .....|+|
T Consensus 739 ~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l-----~~--~i~i~~g~glTE~~~---~~~~~---~~~~~G~P 805 (1452)
T PTZ00297 739 DSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL-----LE--HISVCYVPCLREVFF---LPSEG---VFCVDGTP 805 (1452)
T ss_pred CcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH-----hC--CceEEEecceEEeee---ecCCC---CcccCCee
Confidence 00 46999999873 443322 22 467888999999532 22221 11234999
Q ss_pred CCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccccccccccceeccccCCCceecccCceEEEecCCcEEEEee
Q 004952 531 TMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGR 610 (722)
Q Consensus 531 ~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~dG~l~~~GR 610 (722)
+|+++++|.|....--..+ .||+++. |.+ +++.|++.+ +.|++||+|.++||
T Consensus 806 lpgvEvKI~~~~E~~~~~~---~GEIlvr--~~k------dpe~T~e~~-----------------~gW~~dG~L~IidR 857 (1452)
T PTZ00297 806 APSLQVDLEPFDEPSDGAG---IGQLVLA--KKG------EPRRTLPIA-----------------AQWKRDRTLRLLGP 857 (1452)
T ss_pred cCceEEEEcccccccCCCC---CCeEEEE--ECC------ChHHHHHhh-----------------CcCccCCeEEEEec
Confidence 9999999987321101112 4999983 333 445555421 23458999999999
Q ss_pred cCCeeec-CceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCC-----------C--------CCH
Q 004952 611 ADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-----------T--------SQP 670 (722)
Q Consensus 611 ~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~-----------~--------~~~ 670 (722)
++|.||. +|++|+|..||+.+ ..+|.|.+++|+|... ..++|.|+++... . .+.
T Consensus 858 kKdlikls~GEyVaP~~IE~~l-~~sp~I~qi~V~Gd~~-----k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~ 931 (1452)
T PTZ00297 858 PLGILLPVAYEYVIAAELERIF-SQSRYVNDIFLYADPS-----RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGW 931 (1452)
T ss_pred cccceECCCCcEEcHHHHHHHH-hcCCCccEEEEEecCC-----CceEEEEEeCHHHHHHHHHHHcCCCccccccccCCH
Confidence 9999996 79999999999999 5999999999998543 4489999886310 0 122
Q ss_pred HHHHH----HHHHH---------HHhhcCCCee-ec-CCC-----CCCCCchhhHHHHHHHHhhhhhh
Q 004952 671 DKLKM----IFSKA---------IQSKLNPLFK-VV-PEF-----PRTASNKLLRRVLRDQIKHELSV 718 (722)
Q Consensus 671 ~~l~~----~l~~~---------l~~~~~p~~~-~v-~~l-----P~t~~GKvdR~~L~~~~~~~~~~ 718 (722)
.++.+ .+.+. +..+-+++++ .+ ++| -+||+.|+.|+.+.+.+++++++
T Consensus 932 ~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~ 999 (1452)
T PTZ00297 932 TELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIER 999 (1452)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 23211 12222 1223444433 22 445 47999999999999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=3.5e-41 Score=360.30 Aligned_cols=286 Identities=14% Similarity=0.124 Sum_probs=225.9
Q ss_pred CCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCC--CCEEEEecCccccchh-HHHHHHhhcCCEEEEecCCC
Q 004952 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV--GDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSP 432 (722)
Q Consensus 356 ~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~ 432 (722)
++.++++|||||||.||||+++|+++.+.+.+....++++. .+++++..|++|..+. +.++.++..|+++++.+ ..
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 55789999999999999999999999988877767777644 4689999999998776 66888999999999876 35
Q ss_pred ChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCcccccccccccccc
Q 004952 433 LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSA 512 (722)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (722)
++..+++.++. .|++.++|++++.|.+.. .++++++. ++||+++++++.+.+.+. +..++++.||+||++++
T Consensus 174 ~~~~~l~~i~~--~t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARP--GDLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhcc--CCEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 56667776654 389999999999997652 34677886 688999999998888764 33469999999999864
Q ss_pred cccCCcCCcCccccccccCCCceEEEECCCCCcCCCCCCccceEEEecccCCCccccccccccccceeccccCCCceecc
Q 004952 513 YIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRR 592 (722)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yr 592 (722)
.+... +...|+|+|+.++.+ | ++ . +. | | ..||+
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~-~-~~------~----~~----g---------------------~----~~~~~ 278 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA-D-TL------S----SA----G---------------------L----ARRLD 278 (386)
T ss_pred ccccC------CCCCcccCCCccccC-C-Cc------c----CC----C---------------------c----cceee
Confidence 33211 122456666655432 1 11 0 00 0 0 11689
Q ss_pred cCceEEEecCCcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCC--H
Q 004952 593 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ--P 670 (722)
Q Consensus 593 TGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~--~ 670 (722)
|||+++|+++|+++|+||+||+||++|++|+|.|||++|. +||+|.+|+|.. .+ ++++++|+++++...+ .
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~-~~p~V~~~~v~~-----~g-~~~~a~vv~~~~~~~~~~~ 351 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILE-RNPRVRAAAVRL-----DG-RRLKAFIVVAEDADEAELE 351 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHH-cCCCceEEEEEc-----CC-ceEEEEEEECCCCChHHHH
Confidence 9999999999999999999999999999999999999995 999999998853 24 7899999988654333 4
Q ss_pred HHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhh
Q 004952 671 DKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLL 704 (722)
Q Consensus 671 ~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvd 704 (722)
++++++++++|+.|+.|. +.++++||+|++||++
T Consensus 352 ~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 352 IELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 688999999999999995 5589999999999985
No 123
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-38 Score=359.57 Aligned_cols=490 Identities=16% Similarity=0.130 Sum_probs=328.6
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC
Q 004952 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (722)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~ 266 (722)
..|+..+..+-...-..+....+||++....++.+|+.|... .-.|+.|++++.++.++++..++++++|..++|+||+
T Consensus 48 ~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~ 127 (1032)
T KOG1178|consen 48 EAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPS 127 (1032)
T ss_pred hcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCC
Confidence 344444444332222234556899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CC----HHHHHHH---HHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhccc
Q 004952 267 FA----AREIATR---LRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (722)
Q Consensus 267 ~~----~~~l~~~---l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (722)
+| ++++..+ +......++ ..++........... ........-.+..+....
T Consensus 128 ~~~~e~~~~~~~ia~~~~s~~~~i~----------~~l~i~~~~~~~~~~------------~~sv~~~~~~f~~~~~~~ 185 (1032)
T KOG1178|consen 128 WPNSELAGYLMRIAHFLTSVELEIV----------RRLNIIDILLNSLFP------------KLSVETIADSFQMVLHNE 185 (1032)
T ss_pred CcccccchHHHhhhhhheeccceeh----------hhhhhHHHHhhcccc------------ccchhhccchhhhhhccC
Confidence 99 3322211 111111111 000111111100000 000000000111111111
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHH-H
Q 004952 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS-S 418 (722)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~ 418 (722)
. ...-...-++..+++.||||+||.||||.-+|..+++...|....+..+..+++-......++-....... .
T Consensus 186 ~------~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~ 259 (1032)
T KOG1178|consen 186 D------TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGAL 259 (1032)
T ss_pred C------CcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhhH
Confidence 1 11112344577899999999999999999999999999999999999999898866667767777755444 4
Q ss_pred hhcCCEEEEecCCC--ChhhHHHHHHHhCCcEEechhHHHHHHHhcCCC-------------CCCCccceeEEEeecCCC
Q 004952 419 FLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-------------EGLDWTKIRSFASTGETS 483 (722)
Q Consensus 419 L~~G~~lv~~~~~~--~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~-------------~~~~l~~Lr~i~~~Ge~l 483 (722)
|++|+.+..+.... .+..+.+++++++++..+.+|++.++++..... .....+.|+...++||+.
T Consensus 260 L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~ 339 (1032)
T KOG1178|consen 260 LFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPL 339 (1032)
T ss_pred hhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCcc
Confidence 55555555543322 367899999999999999999998887664322 111234799999999999
Q ss_pred CcchHHHHHhhccCCcccccccccccccccccCCcCC------cC--ccccccccC--CCceEEEECCCCCcCCCCCCcc
Q 004952 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQ--AFGAFSTAT--MTAGLVILDECGVPYPDDQPCV 553 (722)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~--~~~~iG~p~--~~~~~~vld~~~~~~p~G~~gi 553 (722)
...+...+...+...-...-|++|+.+.-........ .. ...+.+.-+ +.+.+.++...+.+.+.++
T Consensus 340 ~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v--- 416 (1032)
T KOG1178|consen 340 LVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGV--- 416 (1032)
T ss_pred chhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeeeccCcccCCcc---
Confidence 8887664444332222334488887765433211110 00 000100001 1234555556666666665
Q ss_pred ceEEEecccCCCccccccccccccceecccc-C--CCceecccCceEEEecCCcEEEEeecCCeeecCceeechHHHHHH
Q 004952 554 GEVGLFPLYLGASDRLLNADHEEVYFRGMPM-Y--KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERV 630 (722)
Q Consensus 554 Gel~v~~~y~~~~~~~~~~~~t~~~f~~~p~-~--~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~ 630 (722)
|..|++.++....-.. ....+.+.|.++.. . .-+|+|||||+||..++|.+.+.||.|+|||+||+||+++||+.+
T Consensus 417 ~~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~ 495 (1032)
T KOG1178|consen 417 GKGCLGAEQNLSSWVV-DGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTV 495 (1032)
T ss_pred cceeecccccccceee-ccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchh
Confidence 4555544433211000 01122223332221 1 236799999999999999999999999999999999999999999
Q ss_pred HhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhhcCC-CeeecCCCCCCCCchhhHHHH
Q 004952 631 CDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS-QPDKLKMIFSKAIQSKLNP-LFKVVPEFPRTASNKLLRRVL 708 (722)
Q Consensus 631 l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~-~~~~l~~~l~~~l~~~~~p-~~~~v~~lP~t~~GKvdR~~L 708 (722)
+. .||.|.++.+..+.+...+ +.+++||+...+... ...+|+.++.+.|+.||+| .++.++++|+|+|||||+++|
T Consensus 496 v~-~~p~v~~~itl~~~~~~~~-~~l~aFvv~~~~~~~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL 573 (1032)
T KOG1178|consen 496 VE-VHPDVKEAITLARENSTVG-QTLLAFVVERGGSKSVLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKAL 573 (1032)
T ss_pred hc-cCcchhhhheeeeeccccC-ceEEEEEeccCCCCchhHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhh
Confidence 95 8899999999999998877 999999998875432 2467999999999999999 677999999999999999999
Q ss_pred HHH
Q 004952 709 RDQ 711 (722)
Q Consensus 709 ~~~ 711 (722)
.+.
T Consensus 574 ~~~ 576 (1032)
T KOG1178|consen 574 LEY 576 (1032)
T ss_pred hhh
Confidence 983
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=3.8e-36 Score=329.54 Aligned_cols=322 Identities=19% Similarity=0.169 Sum_probs=232.3
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEEe
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALY 428 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~~ 428 (722)
.+++++++++|||||||.||+|.++|+++..... .....+++.++|+++...++++..+. ...+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 3557889999999999999999999999865433 22344688999999887666654433 3356678899999877
Q ss_pred cCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCC--CccceeEEEeecCCCCcchHHHHHhhccCCcccccccc
Q 004952 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGG 506 (722)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (722)
+. .++..+++.|+++++|++.++|+++..|++....... ...+||.+++|||+++++..+++.+.+ +++++|.||+
T Consensus 152 ~~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~ 229 (422)
T TIGR02155 152 SG-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGL 229 (422)
T ss_pred CC-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccc
Confidence 64 3467899999999999999999999998765322222 235899999999999999888887766 5899999999
Q ss_pred cccccc-cccCCcCCcCccccccccC--CCceEEEEC-CCCCcCCCCCCccceEEEecccCCCccccccccccccceecc
Q 004952 507 TELSSA-YIQGSLLQPQAFGAFSTAT--MTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGM 582 (722)
Q Consensus 507 TE~~~~-~~~~~~~~~~~~~~iG~p~--~~~~~~vld-~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~ 582 (722)
||+++. +...... . ..|.++ ++..+.|+| ++|+++|+|+. |||++... ++..|
T Consensus 230 tE~~~~~~~~~~~~--~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~--Gelvvt~~-------------~~~~~--- 286 (422)
T TIGR02155 230 SEVIGPGVAMECVE--T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEE--GELVFTTL-------------TKEAL--- 286 (422)
T ss_pred hhhcCCceeecccc--c---CCCceEecCeeEEEEECCCCCCCCCCCCe--eEEEEecC-------------Ccccc---
Confidence 998521 1111110 0 123333 356678999 58999999996 99998632 12222
Q ss_pred ccCCCceecccCceEEEecC-C-----cEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEE
Q 004952 583 PMYKGMCLRRHGDIIKRTVG-G-----YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (722)
Q Consensus 583 p~~~g~r~yrTGDl~~~~~d-G-----~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l 656 (722)
|. .||+|||+++++++ | .+++.||.||+||++|.+|+|.|||++|. .||+|.....+........ +.+
T Consensus 287 p~----~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~-~~~~v~~~~q~~~~~~~~~-~~~ 360 (422)
T TIGR02155 287 PV----IRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVIL-KMDELSPHYQLELTRNGHM-DEL 360 (422)
T ss_pred ce----eeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHH-hCcCcCCCEEEEEEcCCCc-cEE
Confidence 21 28999999999876 4 46899999999999999999999999995 9999985555555544433 578
Q ss_pred EEEEEecCCCC-----CCHHHHHHHHHHHHHhhcCCC--ee--ecCCCCCCCCchhhHH
Q 004952 657 VIFVVLKKGFT-----SQPDKLKMIFSKAIQSKLNPL--FK--VVPEFPRTASNKLLRR 706 (722)
Q Consensus 657 ~a~vv~~~~~~-----~~~~~l~~~l~~~l~~~~~p~--~~--~v~~lP~t~~GKvdR~ 706 (722)
+++|+..++.. .+.+.+.+.|++.+.+.+.+. +. .+++||+|+ ||+.|.
T Consensus 361 ~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 361 TLKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMDVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEEEEEECCCCccCCC-CCceEE
Confidence 88877765321 112233444555554444331 22 457999988 998763
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=1.1e-28 Score=270.74 Aligned_cols=325 Identities=15% Similarity=0.093 Sum_probs=217.1
Q ss_pred cCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh---hcCCCCCCEEEEecCccccchhHH-HHHHhhcCCEEEE
Q 004952 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLAL 427 (722)
Q Consensus 352 ~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~-~~~~L~~G~~lv~ 427 (722)
..+.++++++.|||||||+||+|.+||+++......... ..++.++|+++...+++++.+.+. .++++..|++++.
T Consensus 82 ~~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 82 SADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred cCCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 345678999999999999999999999998765544333 358899999999999888777644 3556778888764
Q ss_pred ecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCC--CccceeEEEeecCCCCcchHHHHHhhccCCccccccc
Q 004952 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (722)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG 505 (722)
.. . ....+++|+++++|++..+|+.+..|.+....... ..++||.+++|||+++++..+++.+.+ +++++|.||
T Consensus 162 ~~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG 237 (445)
T TIGR03335 162 EG-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYG 237 (445)
T ss_pred CC-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCC
Confidence 33 2 23568899999999999999988777654222221 246899999999999998887777654 689999999
Q ss_pred ccccccccccCCcCCcCccccccccCCCceEEEECCC-CCcCCCCCCccceEEEecccCCCccccccccccccceecccc
Q 004952 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPM 584 (722)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~-~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p~ 584 (722)
+||++... .+.. ......+.+.+.+.|+|++ +.++|+|+. |||+++.-+-.. .. ...|.
T Consensus 238 ~TE~~~~~-~c~~-----~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~--GELvvT~L~~~~-------~r-----~~~Pl 297 (445)
T TIGR03335 238 STEGTMCG-ECQA-----VAGLHVPEDLVHLDVYDPRHQRFLPDGEC--GRIVLTTLLKPG-------ER-----CGSLL 297 (445)
T ss_pred hhhhhheE-EecC-----CCCccccCCceEEEEEcCCCCCCCcCCCc--eEEEEEecCCCC-------cc-----CCceE
Confidence 99986321 1111 1112233356789999976 567999996 999996543210 00 01222
Q ss_pred CCCceecccCceEEEec-C----Cc----EEEEeecCCeeecCceeechHHHHHHHhccC---CCcceeEEEeecCCCCC
Q 004952 585 YKGMCLRRHGDIIKRTV-G----GY----IIVQGRADDTMNLGGIKTSSVEIERVCDQAD---ESILETAAISVSPAGGG 652 (722)
Q Consensus 585 ~~g~r~yrTGDl~~~~~-d----G~----l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~---p~V~~~~vv~~~~~~~g 652 (722)
. -|+|||++++.. + |. +...||.||+++++|.+|+|.+||++|. ++ +++..-.-+.+.....+
T Consensus 298 i----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~-~~~~~~~~~~~~~~~~~~~~~~ 372 (445)
T TIGR03335 298 I----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVF-QRENMDSLTGEYEAFLYGEEEG 372 (445)
T ss_pred E----EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHh-ccCCCCCCCccEEEEEecCCCC
Confidence 1 299999999742 2 21 4457999999999999999999999996 74 55543332223222222
Q ss_pred ceEEEEEEEecCCCCCCHHHHHHHHHHH----HHh---hc----C-CC--eeecCCCCCCC-CchhhH
Q 004952 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKA----IQS---KL----N-PL--FKVVPEFPRTA-SNKLLR 705 (722)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~----l~~---~~----~-p~--~~~v~~lP~t~-~GKvdR 705 (722)
...+...|...++...+.+++.+.+.+. ++. .+ + +. .+.-..||+++ .||..|
T Consensus 373 ~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 2355555555543333344555555544 322 11 0 11 11336799984 688655
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.94 E-value=3.7e-24 Score=235.09 Aligned_cols=503 Identities=15% Similarity=0.145 Sum_probs=323.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~--v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++.+||.+|+..-+. .+....++||++|..+|.++|.+|... +++||.|+++.++++|++++++||+.+|.+++|+
T Consensus 780 ~a~tp~~~a~~~~n~--~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIpv 857 (1363)
T KOG3628|consen 780 AAKTPDHIAFTTLNA--RGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIPV 857 (1363)
T ss_pred hhcCCCceEEEEecc--CCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeecc
Confidence 479999999998665 345667999999999999999999988 9999999999999999999999999999999999
Q ss_pred CCCCCHH------HHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhc
Q 004952 264 ADSFAAR------EIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (722)
Q Consensus 264 ~p~~~~~------~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (722)
.|-.... .+..|++.++++.|+++.......+.-+....+...+-..+.+.+.... +|..-..
T Consensus 858 ~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~-----------t~~k~~~ 926 (1363)
T KOG3628|consen 858 PPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE-----------TIRKRKK 926 (1363)
T ss_pred CCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch-----------hhhhhhh
Confidence 9865543 6778999999999999975432222211111111111111111111000 0111111
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHH
Q 004952 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILF 416 (722)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~ 416 (722)
.... .....++....++.+||+-+.--++|.--||..+|.++++.++.......+.+..-++...++.-..|+ ...|
T Consensus 927 ~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcL 1004 (1363)
T KOG3628|consen 927 NIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCL 1004 (1363)
T ss_pred hhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHH
Confidence 1000 111223334466889999999999999999999999999999999988888888888877777766666 4456
Q ss_pred HHhhcCCEEEEecC---CCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCC-------ccceeEEEeecCCCCcc
Q 004952 417 SSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD-------WTKIRSFASTGETSNVD 486 (722)
Q Consensus 417 ~~L~~G~~lv~~~~---~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~-------l~~Lr~i~~~Ge~l~~~ 486 (722)
...++|.+.++.+. ..++..|+..|++++|.=++.+=+.+....+....+..+ +++ ..++..-|.....
T Consensus 1005 lgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~-s~vv~~~~RPr~a 1083 (1363)
T KOG3628|consen 1005 LGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS-SIVVPAEERPRIA 1083 (1363)
T ss_pred HHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc-ceeeecCCccHHH
Confidence 77788988777653 336778999999999999988888888877654332222 222 2233333333333
Q ss_pred hHHHHHhhcc----CC-ccc-------------ccccccccccccccCCcCCcCc-------------cccccccCCCce
Q 004952 487 DDLWLSSKAW----YN-AII-------------ESCGGTELSSAYIQGSLLQPQA-------------FGAFSTATMTAG 535 (722)
Q Consensus 487 ~~~~~~~~~~----~~-~l~-------------n~YG~TE~~~~~~~~~~~~~~~-------------~~~iG~p~~~~~ 535 (722)
+..-+.+.+. .+ .+. +.|-.-|=+....-........ ....|.-.++++
T Consensus 1084 li~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~ 1163 (1363)
T KOG3628|consen 1084 LIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTD 1163 (1363)
T ss_pred HHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccce
Confidence 3333322211 00 111 1222222111110000000000 012377778999
Q ss_pred EEEECC-CCCcCCCCCCccceEEE-----ecccCCCccccccccccccceeccccCCCceecccCceEEEe------cC-
Q 004952 536 LVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT------VG- 602 (722)
Q Consensus 536 ~~vld~-~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~------~d- 602 (722)
+.|+++ ...||..|+ +||+|+ +.+|+...+. ++.+...++.. .....+..|-||||+|... .+
T Consensus 1164 i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~~~~d~-~~~~~fn~rl~-~g~~~~~sy~RTG~LGFl~~t~~t~~~~ 1239 (1363)
T KOG3628|consen 1164 IAIVNPETKGPCRDGE--LGEIWVNSAHNASCSFTIGDE-LRSNHFNARLS-SGDLLGKSYARTGDLGFLRRTSLTDANV 1239 (1363)
T ss_pred eEEeCCccccccccCC--cceEEeccccccccccccCch-hhhhhhhhhcc-ccccccccceeeeeeeeeeeeecccccc
Confidence 999995 467888888 599999 3445543211 12222122221 2223466799999999874 22
Q ss_pred ---CcEEEEeecCCeeecCceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHH-
Q 004952 603 ---GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFS- 678 (722)
Q Consensus 603 ---G~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~- 678 (722)
.-||++|-+++.+-++|.|-.|.+||..+.+.||.|.+|+|+... ..+|..+.... +....+|.-.+.
T Consensus 1240 e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~------glvVvviE~~g--q~~~~~LvPlIv~ 1311 (1363)
T KOG3628|consen 1240 ERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT------GLVVVVIECHG--QQELADLVPLIVN 1311 (1363)
T ss_pred eeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC------CeEEEEEEecC--chhHhhhhHHHHH
Confidence 348899999999999999999999999998899999999998653 35555555543 222223322222
Q ss_pred HHHHh-hcCC-Ceeec--CCCCCCCCchhhHHHHHHHH-hhhh
Q 004952 679 KAIQS-KLNP-LFKVV--PEFPRTASNKLLRRVLRDQI-KHEL 716 (722)
Q Consensus 679 ~~l~~-~~~p-~~~~v--~~lP~t~~GKvdR~~L~~~~-~~~~ 716 (722)
..|.+ +++- ...+| ..||+++.|...|..+++.+ .+++
T Consensus 1312 ~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL 1354 (1363)
T KOG3628|consen 1312 VVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKL 1354 (1363)
T ss_pred HHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhccc
Confidence 22322 3333 22244 47999999999999987754 4433
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=2.6e-24 Score=213.28 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=159.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEec
Q 004952 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (722)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl 263 (722)
++.+|+++|+++.++. .+...++||+||.++++++|+.|++ . +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 6 ~~~~p~~~al~~~~~~--~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 6 LAADPASPRLTFYDDA--TGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLA 83 (227)
T ss_pred hhhCCCCcEEEEEcCC--CCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeC
Confidence 4678999999864321 0122479999999999999999998 8 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCC--CCCCCCCCCCCCCCHHHHhcccCC
Q 004952 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI--GNDVGIPLREQDLSWKDFLSSVDY 341 (722)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 341 (722)
+ ++++++++++++...... .+...+.+... ..........+..+|.+.+.....
T Consensus 84 n-------------~s~a~~~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (227)
T TIGR03089 84 G-------------DPDADVVVTGPDRLAAAA-----------GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD 139 (227)
T ss_pred C-------------CCCCCEEEeCcchhhhcc-----------cCCceEEEeccccccCCCCCCCCcccchhhhhhccCC
Confidence 4 789999999876532211 11223332110 000000012233456555543221
Q ss_pred CCCCCCCCCc-cCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHh
Q 004952 342 HPRPNYYSPV-YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (722)
Q Consensus 342 ~~~~~~~~~~-~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L 419 (722)
...+. ...++|++.|+||||+ +|++++... ...+++++|+++ .+|++|..++ ..++.+|
T Consensus 140 -----~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 140 -----QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred -----CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 11111 3456999999999985 666655544 556789999999 9999999998 5688999
Q ss_pred hcCCEEEEecCCCChhhHHHHHHHhCCc
Q 004952 420 LNGATLALYQGSPLERSFGKFVQDAGVT 447 (722)
Q Consensus 420 ~~G~~lv~~~~~~~~~~l~~~i~~~~vt 447 (722)
..|+|+++++ .+++..+++.|+++|||
T Consensus 201 ~~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 9999999996 78999999999999997
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.90 E-value=8e-22 Score=205.20 Aligned_cols=319 Identities=24% Similarity=0.221 Sum_probs=222.4
Q ss_pred cCCCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchh-HHHHHHhhcCCEEEE
Q 004952 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLAL 427 (722)
Q Consensus 352 ~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~L~~G~~lv~ 427 (722)
..+-++...|--||||||+|+-+..+...+-.. ++......+...+|++.....++...+- ...+++--.|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 344566777999999999999999999876443 3333445678899999877776644443 444555556666654
Q ss_pred ecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCC--CCCccceeEEEeecCCCCcchHHHHHhhccCCccccccc
Q 004952 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (722)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG 505 (722)
..+ -+-..-+++|+.+++|++.++|+.+..|.+..... ...-.+||.+++|+|+++++..+.+.+.+ ++..++.||
T Consensus 166 ~~~-g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYG 243 (438)
T COG1541 166 ISG-GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYG 243 (438)
T ss_pred cCC-ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccc
Confidence 432 34567889999999999999999999998765443 23346899999999999999988888776 788999999
Q ss_pred cccccccc-ccCCcCCcCccccccccCCCceEEEEC-CCCCcCCCCCCccceEEEecccCCCccccccccccccceeccc
Q 004952 506 GTELSSAY-IQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (722)
Q Consensus 506 ~TE~~~~~-~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p 583 (722)
.||..++- ..+.... -.-..-++.-+.|+| +.|+++|.|+- |||+++.---. ..|
T Consensus 244 ltE~~g~g~~eC~~~~-----glhi~eD~~~~Ei~dP~t~e~l~dge~--GelV~T~L~~~----------------~~P 300 (438)
T COG1541 244 LTEGFGPGAGECTERN-----GLHIWEDHFIFEIVDPETGEQLPDGER--GELVITTLTKE----------------GMP 300 (438)
T ss_pred cccccCCccccccccc-----CCCcchhhceeeeecCCcCccCCCCCe--eEEEEEecccc----------------Ccc
Confidence 99997652 1111111 112344677889999 57999999995 99998542100 122
Q ss_pred cCCCceecccCceEEEecC----Cc-----EEEEeecCCeeecCceeechHHHHHHHhccCCCcc-eeEEEeecCCCCCc
Q 004952 584 MYKGMCLRRHGDIIKRTVG----GY-----IIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL-ETAAISVSPAGGGP 653 (722)
Q Consensus 584 ~~~g~r~yrTGDl~~~~~d----G~-----l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~-~~~vv~~~~~~~g~ 653 (722)
.. -|+|||+++..++ |. ..+.||.||+++++|.+|+|..||.+|. +.+.+. +-.++... +.. .
T Consensus 301 lI----RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~-~~~~~~~~yqi~~~~-~~~-~ 373 (438)
T COG1541 301 LI----RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLL-QIPEVTPHYQIILTR-NGG-L 373 (438)
T ss_pred eE----EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHh-cccCCCceEEEEEec-CCC-C
Confidence 22 3999999999763 33 3588999999999999999999999996 899998 44444444 222 2
Q ss_pred eEEEEEEEecCCCCCCHH--HHHHHHHHHHHhhcCC--C--eeecCCCCCCCCchh
Q 004952 654 EVLVIFVVLKKGFTSQPD--KLKMIFSKAIQSKLNP--L--FKVVPEFPRTASNKL 703 (722)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~--~l~~~l~~~l~~~~~p--~--~~~v~~lP~t~~GKv 703 (722)
..+..-|+.+++...... ++.+.+.+.+.+.+.- . ++.+.++|+|-. |.
T Consensus 374 d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~~-K~ 428 (438)
T COG1541 374 DELTVRVELENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTEG-KA 428 (438)
T ss_pred ceEEEEEEecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceecccC-ce
Confidence 678888888764211112 2224454444433322 1 236689999876 54
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.1e-21 Score=203.16 Aligned_cols=116 Identities=17% Similarity=0.194 Sum_probs=105.5
Q ss_pred eecccCceEEE-ecCCcEEEEeecCCeeecCc---eeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecC
Q 004952 589 CLRRHGDIIKR-TVGGYIIVQGRADDTMNLGG---IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (722)
Q Consensus 589 r~yrTGDl~~~-~~dG~l~~~GR~dd~ik~~G---~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~ 664 (722)
+||+|||+|++ |+||+|+|.||.| +| ++|+|. ||++|. +||+|.+|+|++++++..| +.++|||++..
T Consensus 209 gW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~-~hp~V~eaaVvgvpd~~~g-e~v~A~Vv~~~ 280 (365)
T PRK09188 209 IWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALK-SDPAVSDVAIALFSLPAKG-VGLYAFVEAEL 280 (365)
T ss_pred cEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHH-hCCCccEEEEEEEEcCCCC-eEEEEEEEECC
Confidence 39999999998 6999999999998 88 799999 999995 9999999999999999888 99999999874
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCC-eeecCCCCCCCCchhhHHHHHHHHhhh
Q 004952 665 GFTSQPDKLKMIFSKAIQSKLNPL-FKVVPEFPRTASNKLLRRVLRDQIKHE 715 (722)
Q Consensus 665 ~~~~~~~~l~~~l~~~l~~~~~p~-~~~v~~lP~t~~GKvdR~~L~~~~~~~ 715 (722)
..+.++|+++++++|+. ++|. +.++++||+|+||||+|++|++++.+.
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~ 329 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQ 329 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcc
Confidence 45678999999999999 9995 559999999999999999999986443
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.70 E-value=2.9e-15 Score=160.83 Aligned_cols=258 Identities=17% Similarity=0.102 Sum_probs=162.5
Q ss_pred eEEEEcCCCCCCCCceEEeCChHHHHHHHHh---hhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCE-EEEecCCCC
Q 004952 358 VVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPL 433 (722)
Q Consensus 358 ~a~il~TSGSTG~PKgV~~th~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~-lv~~~~~~~ 433 (722)
-..+..||||||+|-.+..+........... ....++..++++..+..- .+ .++..+.+... +-.++-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch--hHHHHHHhccceeeecCCCcC
Confidence 3567789999999999999998653322221 122355666776654210 11 22233333222 333333345
Q ss_pred hhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhhccCCccccccccccccccc
Q 004952 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAY 513 (722)
Q Consensus 434 ~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 513 (722)
.+.+++.|++++++++.++|+.+..|++.......+ .+++.++++||.+++...+.+.+.+ ++++++.||+|| |.+.
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hheE
Confidence 678899999999999999999999998864333333 4789999999999998877777665 689999999999 4332
Q ss_pred ccCCcCCcCccccccccCCCceEE--EECCCCCcCCCCCCccceEEEecccCCCccccccccccccceeccccCCCceec
Q 004952 514 IQGSLLQPQAFGAFSTATMTAGLV--ILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 591 (722)
Q Consensus 514 ~~~~~~~~~~~~~iG~p~~~~~~~--vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~r~y 591 (722)
..+.. +..-.--...-+. ++|++++++| +|+.- .+ ...|.. -|
T Consensus 253 ~eC~~------g~lHl~ed~~~vE~~ivD~~~~~~~---------ViT~L-~n---------------~~~PlI----RY 297 (430)
T TIGR02304 253 STCRC------GTLHLNEDLVHIEKQYLDEHKRFVP---------IITDF-TR---------------TTQPIV----RY 297 (430)
T ss_pred EecCC------CCEEEccccEEEEeeEECCCCceEE---------EEecC-CC---------------ccceEE----ee
Confidence 22211 1111111223333 7887664432 22221 11 012222 29
Q ss_pred ccCceEEEecC----Cc----E-EEEeecCCeeec---Cc--eeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEE
Q 004952 592 RHGDIIKRTVG----GY----I-IVQGRADDTMNL---GG--IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (722)
Q Consensus 592 rTGDl~~~~~d----G~----l-~~~GR~dd~ik~---~G--~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~ 657 (722)
+|||++++.++ |. | .+.||.||++++ +| ..|.|..|+.++....++|.+.-++... . ..+.
T Consensus 298 rtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~---~--~~l~ 372 (430)
T TIGR02304 298 RLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG---S--AQLE 372 (430)
T ss_pred eCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc---C--CeEE
Confidence 99999998544 32 3 388999999985 34 5559999998854467899998776432 1 4555
Q ss_pred EEEEec
Q 004952 658 IFVVLK 663 (722)
Q Consensus 658 a~vv~~ 663 (722)
..+++.
T Consensus 373 v~~~~~ 378 (430)
T TIGR02304 373 LIADCE 378 (430)
T ss_pred EEEEeC
Confidence 555553
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.52 E-value=2e-12 Score=143.77 Aligned_cols=488 Identities=13% Similarity=0.082 Sum_probs=288.7
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCC--HHHHHHHHHHHHhCcEEEe
Q 004952 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVS 262 (722)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~--v~~gd~V~l~~~~s--~~~vv~~lA~~~aGa~~vp 262 (722)
..++..+|.++-+.+| ....+||..+..++.+.|+.-+.. .+++|+|.++...+ .++++.+++|.-+|.+.+|
T Consensus 105 nhs~~~ta~i~id~kg---k~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp 181 (1363)
T KOG3628|consen 105 NHSATSTAHICIDKKG---KATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVP 181 (1363)
T ss_pred cCCCCCceEEEEcCCC---ceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeecc
Confidence 4567888888877742 367999999999999999955444 99999999998765 7999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeccchhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCC
Q 004952 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (722)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (722)
+.+.++.+++..+++-...+++++.....+.+...- .. ... .....|....+-....
T Consensus 182 ~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~----------~~------------~s~-~k~v~~w~t~~~k~~~ 238 (1363)
T KOG3628|consen 182 LSELSSSEELKDIVNPTPERVALTTEAGERAFINDN----------SP------------VSL-AKAVAWWKTNDFKGNY 238 (1363)
T ss_pred chhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc----------Cc------------ccH-HHHHHhhhccccccee
Confidence 999999999999999999999999876543221110 00 000 0000010000000000
Q ss_pred CCCCCCCCccCCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhh--------------------hhcCCCCCCEEEE
Q 004952 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--------------------AHIDLKVGDVYCW 402 (722)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~--------------------~~~~~~~~d~~l~ 402 (722)
.-.....+...-. ..||-||++++|.--||+.+|+ ++...+... ..++....++++.
T Consensus 239 -~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 239 -TKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred -ehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 0000001111112 7899999999999999999997 433322111 1133444556655
Q ss_pred ecCccccchh-HHHHHHhhcCCEEEEecCCC--ChhhHHHHHHHhCCcEEechhHHHHHHHhc----C-------CCCCC
Q 004952 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNT----N-------CLEGL 468 (722)
Q Consensus 403 ~~~~~~~~~~-~~~~~~L~~G~~lv~~~~~~--~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~----~-------~~~~~ 468 (722)
....+-..|+ ..++.+|.+|.|.+.++.+. .+..+..++.++|.+++..=-..+++.... + .....
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~ 395 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTP 395 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCC
Confidence 5544444444 45889999999999998643 456788999999999987754444443221 0 01235
Q ss_pred CccceeEEEeecCCCCcchHH-----HHHhhcc-CCc---------------ccccccccccccccccCCcC--------
Q 004952 469 DWTKIRSFASTGETSNVDDDL-----WLSSKAW-YNA---------------IIESCGGTELSSAYIQGSLL-------- 519 (722)
Q Consensus 469 ~l~~Lr~i~~~Ge~l~~~~~~-----~~~~~~~-~~~---------------l~n~YG~TE~~~~~~~~~~~-------- 519 (722)
++++||.+++.-+.+..+..+ |++.... .++ .+.+=+.+|++....-.+..
T Consensus 396 d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e 475 (1363)
T KOG3628|consen 396 DLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGE 475 (1363)
T ss_pred CccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccc
Confidence 789999999999998877433 3332110 000 01111123443221111110
Q ss_pred ---------------------CcCccccccccCCC-ceEEEECC-CCCcCCCCCCccceEEEecccCCCccccccccccc
Q 004952 520 ---------------------QPQAFGAFSTATMT-AGLVILDE-CGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEE 576 (722)
Q Consensus 520 ---------------------~~~~~~~iG~p~~~-~~~~vld~-~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~t~ 576 (722)
.......+|.-.++ ..+.|+++ ..+.|..++ ||||||.....+. .+|.-+..|.
T Consensus 476 ~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~e--VGEIwVsS~~~~~-~~~al~~~t~ 552 (1363)
T KOG3628|consen 476 GLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDE--VGEIWVSSNSLGK-LFYALDKQTE 552 (1363)
T ss_pred eeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCc--ceeEEEecCCccc-ceeecccccc
Confidence 00011123444443 55667775 477888888 5999994322221 0111222333
Q ss_pred cceeccc------cCCCceecccCceEEEecCCcEEEEeecCCeee-cCceeechHHHHHHH---------hccCCCcce
Q 004952 577 VYFRGMP------MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVC---------DQADESILE 640 (722)
Q Consensus 577 ~~f~~~p------~~~g~r~yrTGDl~~~~~dG~l~~~GR~dd~ik-~~G~ri~~~eIE~~l---------~~~~p~V~~ 640 (722)
.-|...| .....++.|||=+|++. +|.++|+|-.+|++- ++|-+....+|-..- .+..+.|-+
T Consensus 553 ~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~ 631 (1363)
T KOG3628|consen 553 NTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFD 631 (1363)
T ss_pred ceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEE
Confidence 3343333 22344578999999996 456777776666664 788777765553322 145566777
Q ss_pred eEEEeecCCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHh-hc-CCCee---ecCCCCCCCCchhhHHHHHHHHhh
Q 004952 641 TAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQS-KL-NPLFK---VVPEFPRTASNKLLRRVLRDQIKH 714 (722)
Q Consensus 641 ~~vv~~~~~~~g~~~l~a~vv~~~~~-~~~~~~l~~~l~~~l~~-~~-~p~~~---~v~~lP~t~~GKvdR~~L~~~~~~ 714 (722)
+.++- . ++++..++-.+.. +.+.-+....+-+.+-. +. .+..+ .-+.||||+-|-|.-..+++.|.+
T Consensus 632 ~saf~------~-E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~ 704 (1363)
T KOG3628|consen 632 VSAFE------D-EHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLE 704 (1363)
T ss_pred Eeeee------c-ceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHc
Confidence 76664 1 5555444433322 11111222222223322 22 22222 457899999988999999888754
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.37 E-value=8.7e-13 Score=105.60 Aligned_cols=69 Identities=33% Similarity=0.488 Sum_probs=60.3
Q ss_pred HHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhcCCC---eeecCC-CCCCCCc
Q 004952 626 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPL---FKVVPE-FPRTASN 701 (722)
Q Consensus 626 eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~~p~---~~~v~~-lP~t~~G 701 (722)
|||++|. +||+|.+|+|++.+++..| +.++|||++ +.++|+++++++||.||+|. ++.+++ ||+|+||
T Consensus 1 EIE~~l~-~~~~V~~~~V~~~~d~~~g-~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~G 72 (73)
T PF13193_consen 1 EIESVLR-QHPGVAEAAVVGVPDEDWG-ERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSG 72 (73)
T ss_dssp HHHHHHH-TSTTEEEEEEEEEEETTTE-EEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTS
T ss_pred CHHHHHh-cCCCccEEEEEEEEccccc-ccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCC
Confidence 8999995 9999999999999999888 999999998 34899999999999999993 335677 9999999
Q ss_pred h
Q 004952 702 K 702 (722)
Q Consensus 702 K 702 (722)
|
T Consensus 73 K 73 (73)
T PF13193_consen 73 K 73 (73)
T ss_dssp S
T ss_pred C
Confidence 9
No 133
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=98.92 E-value=2.4e-11 Score=102.15 Aligned_cols=84 Identities=18% Similarity=0.156 Sum_probs=51.9
Q ss_pred ChhhhhHHHHHhhhcCCCCCCCcchhhhhhhhcccccccCCC------CCccCCCccccccccHHHHHHHhCCcccccc-
Q 004952 41 DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP------PLYWFPSLDQSKLTNLGNALEIHGPKLLGRA- 113 (722)
Q Consensus 41 ~hq~~Pfe~~lv~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 113 (722)
+||+|||++ ||+.|++.|.....|+ ||+||++++..... .....+.....+++||.+.+.+.++++.+.+
T Consensus 1 ~hq~~Pf~~-lv~~l~~~r~~~~~pl--fqv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~ 77 (91)
T PF13745_consen 1 EHQDYPFER-LVEALGPPRDPSRNPL--FQVMFNYQNFSQSALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLE 77 (91)
T ss_dssp -T--S-HHH-HHHHT-----TTS-SS---SEEEEEE----S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEE
T ss_pred CCccCCHHH-HHHHhCcccCCccccc--cCeEEEEEecccccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEE
Confidence 699999999 9999999998888888 99999998765432 2223344467899999999999999999999
Q ss_pred cCCCCCCHHHHHHHHhhCH
Q 004952 114 YKDPITSFRLFQKFTVEHP 132 (722)
Q Consensus 114 y~~~~~~~~~~~~~ti~~~ 132 (722)
|++ ++|++++|++|
T Consensus 78 Y~~-----~lf~~~ti~~~ 91 (91)
T PF13745_consen 78 YNT-----DLFSEETIERM 91 (91)
T ss_dssp EET-----TT--HHHHHHH
T ss_pred EEh-----HhCCHHHHhcC
Confidence 999 99999999875
No 134
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.91 E-value=4e-08 Score=103.50 Aligned_cols=237 Identities=18% Similarity=0.101 Sum_probs=127.5
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHh---hhhcCCCCC--CEEEEecCccccch-----hHHHHHHhhcC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVG--DVYCWPTNLGWVMG-----PVILFSSFLNG 422 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~---~~~~~~~~~--d~~l~~~~~~~~~~-----~~~~~~~L~~G 422 (722)
.+++++..++.||||||.|--+.+.+..+....... ...+..... -.++...|-..... .......+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 345667789999999999866666665554433222 222222111 12333333221111 12233334455
Q ss_pred CEEEEecCCCChhhHHHHH----HHhCCcEEechhHHHHHHHhcCCCCC--CCcc-ceeEEEeec------CCCCcc-hH
Q 004952 423 ATLALYQGSPLERSFGKFV----QDAGVTVLGTVPSLVKAWRNTNCLEG--LDWT-KIRSFASTG------ETSNVD-DD 488 (722)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i----~~~~vt~l~~~P~~l~~l~~~~~~~~--~~l~-~Lr~i~~~G------e~l~~~-~~ 488 (722)
..-.+-....+.+.+.+.+ .+.++..+++.|.++-.++....... ..|+ ..+.+-.|| |.++.+ ..
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 5533322334555555444 35567888888887666554322222 2333 344454544 345443 34
Q ss_pred HHHHhhccC---CcccccccccccccccccCCcCCcCccccccccCCCceEEEECC-CCCcCCCCCCccceEEEecccCC
Q 004952 489 LWLSSKAWY---NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLFPLYLG 564 (722)
Q Consensus 489 ~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v~~~y~~ 564 (722)
..+.+.++. ..+++.||+||............ .+.|.. +.|.|+ +.+++|.|++ |-|.+-..+..
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~--------~~~p~w-V~iRDp~tl~~~~~Ge~--Gli~vidl~~~ 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH--------FHVPPW-VIIRDPETLEPLPPGET--GLIQVIDLANT 314 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc--------ccCCCe-EEEECCCCCcCCCCCCe--eEEEEEccccc
Confidence 445554532 36999999999775443331111 123323 777785 5899999996 77776322211
Q ss_pred CccccccccccccceeccccCCCceecccCceEEEecC--------CcEEEEeecCCeeecCceee
Q 004952 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG--------GYIIVQGRADDTMNLGGIKT 622 (722)
Q Consensus 565 ~~~~~~~~~~t~~~f~~~p~~~g~r~yrTGDl~~~~~d--------G~l~~~GR~dd~ik~~G~ri 622 (722)
. .++. .-|.|+|++..+ .+++++||.+. -.+||-..
T Consensus 315 s-------------------~p~~--IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~-ae~RGCs~ 358 (365)
T PF04443_consen 315 S-------------------YPGF--ILTEDLGVLHGDDDCGCRKGKYFEVLGRADG-AEIRGCSL 358 (365)
T ss_pred C-------------------CCcE--EEEcceeeecCCCCCCCccCCEEEEEeCCCC-CccCCcHH
Confidence 0 1122 459999988654 27999999863 34555544
No 135
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.25 E-value=1.1e-05 Score=90.15 Aligned_cols=89 Identities=19% Similarity=0.270 Sum_probs=56.0
Q ss_pred cccCceEEEec--CC--cEEEEeecCCeeecCceeechHHHHHHHhcc----CCCcceeEEEeecCCCCCceEEEEEEEe
Q 004952 591 RRHGDIIKRTV--GG--YIIVQGRADDTMNLGGIKTSSVEIERVCDQA----DESILETAAISVSPAGGGPEVLVIFVVL 662 (722)
Q Consensus 591 yrTGDl~~~~~--dG--~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~----~p~V~~~~vv~~~~~~~g~~~l~a~vv~ 662 (722)
|+.||+++... ++ .|+|+||.+.++++.|+++.-.+|+.+|.+. .-.+.+..+......... ..-+.|+.+
T Consensus 371 Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~-~~Y~~~~e~ 449 (528)
T PF03321_consen 371 YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNP-PHYVLFWEL 449 (528)
T ss_dssp EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSS-BEEEEEEEE
T ss_pred eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCC-CceEEEEEe
Confidence 89999999853 45 7999999999999999999999999999643 233566666655222222 566677777
Q ss_pred cCCCCCCHHHHHHHHHHHH
Q 004952 663 KKGFTSQPDKLKMIFSKAI 681 (722)
Q Consensus 663 ~~~~~~~~~~l~~~l~~~l 681 (722)
+.. ..+.+.+.+.|.+.|
T Consensus 450 ~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 450 EGE-PDDLEELAKALDESL 467 (528)
T ss_dssp CS--HHHHHHHHHHHHHCS
T ss_pred CCC-chHHHHHHHHHHHHh
Confidence 653 112234444444433
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.77 E-value=0.0012 Score=74.10 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=38.0
Q ss_pred ecccCceEEEec----CCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 590 LRRHGDIIKRTV----GGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 590 ~yrTGDl~~~~~----dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
-|+.||.++... --.|.|+||.+.++++.|.++.-.+++.+|.
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~ 455 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVE 455 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHH
Confidence 389999999853 3468999999999999999999999999885
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.47 E-value=0.012 Score=65.73 Aligned_cols=43 Identities=19% Similarity=0.263 Sum_probs=37.2
Q ss_pred ecccCceEEEe----cCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 590 LRRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 590 ~yrTGDl~~~~----~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
-||.||+++.. .--.|.|++|.+-+..+.|.+..-.++-.++.
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~ 468 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVK 468 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHH
Confidence 38999999874 45679999999999999999999999888775
No 138
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.42 E-value=0.0087 Score=66.89 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=37.5
Q ss_pred ecccCceEEE----ecCCcEEEEeecCCeeecCceeechHHHHHHHh
Q 004952 590 LRRHGDIIKR----TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (722)
Q Consensus 590 ~yrTGDl~~~----~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (722)
-||.||+++. +.--.|.|++|.+.+..+.|.+..-.++-.++.
T Consensus 416 RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~ 462 (606)
T PLN02247 416 RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVT 462 (606)
T ss_pred EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHH
Confidence 3899999987 445679999999999999999999999988775
No 139
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.10 E-value=0.0025 Score=53.67 Aligned_cols=84 Identities=24% Similarity=0.364 Sum_probs=52.2
Q ss_pred ceeechHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCC---CHHHHHHHHHHHHHhhcC--CCee--e
Q 004952 619 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLN--PLFK--V 691 (722)
Q Consensus 619 G~ri~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~---~~~~l~~~l~~~l~~~~~--p~~~--~ 691 (722)
|.+|+|..||++|. ++|++....-+.+....+. +.+...|...++... +.+++.+.++++|.+.+. |... .
T Consensus 1 GvnvfP~~Ie~vl~-~~~~~~~~y~i~v~~~~~~-D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~~~V~lv~ 78 (96)
T PF14535_consen 1 GVNVFPSQIEEVLR-EFPEVSPEYQIVVTREGGL-DELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVRPEVELVP 78 (96)
T ss_dssp TEEE-HHHHHHHHC-TSTTEEEEEEEEEEEETTE-EEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS-EEEEEE-
T ss_pred CcEECHHHHHHHHH-hCcCCCCcEEEEEEcCCCC-cEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCceEEEEEEC
Confidence 78999999999995 9999994444444433333 778888888875432 235677777777766543 3322 4
Q ss_pred cCCCCCCCCchhhH
Q 004952 692 VPEFPRTASNKLLR 705 (722)
Q Consensus 692 v~~lP~t~~GKvdR 705 (722)
..+||++ .||..|
T Consensus 79 ~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 79 PGTLPRS-EGKAKR 91 (96)
T ss_dssp TT-S----SSSS-S
T ss_pred CCCccCC-CCcceE
Confidence 5689997 678654
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=91.66 E-value=0.81 Score=49.15 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=68.8
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEE
Q 004952 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~--~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il 285 (722)
-+|..++...+..+|+.|... +.+||+|.++..-+. .-+...+|+.++|++++|+.+. .-++-..++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 589999999999999999999 999999999876221 1266789999999999999884 456667799999999999
Q ss_pred eccch
Q 004952 286 TQDFI 290 (722)
Q Consensus 286 ~~~~~ 290 (722)
+..++
T Consensus 188 ~tps~ 192 (438)
T COG1541 188 ATPSY 192 (438)
T ss_pred EChHH
Confidence 98864
No 141
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=75.37 E-value=15 Score=39.81 Aligned_cols=89 Identities=17% Similarity=0.091 Sum_probs=65.5
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.||.+|++. =.+-.+|.+.+... +.......++++++++....+-+..+ +..+++++..|+..+..+.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~-~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF-VVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH-HHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee-eeeeccccccccccccccc
Confidence 568888876 23456777766443 33334467899999988777666433 3447788999999999987
Q ss_pred CCChhhHHHHHHHhCCcEEec
Q 004952 431 SPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~ 451 (722)
....+.+...+++.+++++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 778889999999999999996
No 142
>PLN02736 long-chain acyl-CoA synthetase
Probab=74.07 E-value=37 Score=39.59 Aligned_cols=119 Identities=12% Similarity=-0.093 Sum_probs=79.5
Q ss_pred CCCCeEEEE--cCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEe
Q 004952 354 PVDAVVNIL--FSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (722)
Q Consensus 354 ~~~~~a~il--~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~ 428 (722)
.|+.+|+.. ...|.+|. -..+|.+.+... ++......++.++|++...++-+..... ..++++..|+.++..
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~-~~lA~~~~G~v~vpl 133 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLI-VDHACSAYSYVSVPL 133 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCeEEEe
Confidence 456666532 12333322 234677766443 3444456789999999887776654433 356889999999988
Q ss_pred cCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEee
Q 004952 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (722)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~ 479 (722)
.....++.+...+++.+++++++.+..+..+..... .++.++.+++-
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 777778899999999999999999887766654321 23556666654
No 143
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=69.61 E-value=25 Score=38.76 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=59.9
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH--HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEE
Q 004952 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR--AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~--~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il 285 (722)
.+|..++...+...++.+... +++||++.++.+.+.. .....+++.+.|+..+|... ......++++.++.+++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 578899998888888888888 9999999998876543 23445788999999887653 23456788999999887
Q ss_pred ecc
Q 004952 286 TQD 288 (722)
Q Consensus 286 ~~~ 288 (722)
...
T Consensus 182 ~~p 184 (445)
T TIGR03335 182 ASV 184 (445)
T ss_pred ECH
Confidence 654
No 144
>PRK09274 peptide synthase; Provisional
Probab=67.49 E-value=35 Score=38.67 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCCCC-CCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEec
Q 004952 354 PVDAVVNILFSSGTT-GEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (722)
Q Consensus 354 ~~~~~a~il~TSGST-G~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~ 429 (722)
.|+.+|++....+++ +..+-..+|.+.+... ++......++.++|++....+-+...-. .+++++..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~-~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA-LTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH-HHHHHHHcCeEEEEcC
Confidence 346666554332221 1223335777776443 3333445789999999888776654433 3678899999999887
Q ss_pred CCCChhhHHHHHHHhCCcEEechh
Q 004952 430 GSPLERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P 453 (722)
.....+.+...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 666777888899999999888754
No 145
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=66.50 E-value=30 Score=37.79 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=61.2
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEE
Q 004952 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~--~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il 285 (722)
.+|...+......+++.+... +++||++....+.+. ......++.++.|+..+++++.. .+++...|++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 457777776666777777777 999999987665432 22334677889999999987765 57788999999999998
Q ss_pred eccch
Q 004952 286 TQDFI 290 (722)
Q Consensus 286 ~~~~~ 290 (722)
.....
T Consensus 173 ~~Ps~ 177 (422)
T TIGR02155 173 VTPSY 177 (422)
T ss_pred EcHHH
Confidence 87643
No 146
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.05 E-value=47 Score=37.09 Aligned_cols=97 Identities=9% Similarity=-0.057 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++. . +..+|.+.+... +.......++.+++++....+-+.+.- ..+|+++..|+..+..+.
T Consensus 18 ~~~~~a~~~--~-------~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~-~~~la~~~~G~~~v~l~~ 87 (513)
T PRK07656 18 FGDKEAYVF--G-------DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWV-IAALGALKAGAVVVPLNT 87 (513)
T ss_pred CCCCeEEEe--C-------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCc
Confidence 346666654 1 234777776443 333334568899999988877665443 346788999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (722)
......+.+.+++.++.+++..+.....+.
T Consensus 88 ~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 117 (513)
T PRK07656 88 RYTADEAAYILARGDAKALFVLGLFLGVDY 117 (513)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhHHHHH
Confidence 667788999999999999998887665543
No 147
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=65.56 E-value=30 Score=34.16 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=55.6
Q ss_pred CCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCC
Q 004952 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIAD 265 (722)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~--~~vv~~lA~~~aGa~~vpl~p 265 (722)
.++.+|++.... -.|...+...+ ... +.++|++. .+|-.- .+...+++++.+|+..+.+ +
T Consensus 148 ~~~D~a~l~yTs--------g~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~ 210 (227)
T TIGR03089 148 DATAPALVAGGG--------EWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-T 210 (227)
T ss_pred CCCcceeeeccc--------cccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-c
Confidence 456777765543 23444443322 445 88999999 888654 5556899999999998887 7
Q ss_pred CCCHHHHHHHHHhcCc
Q 004952 266 SFAAREIATRLRVSKA 281 (722)
Q Consensus 266 ~~~~~~l~~~l~~~~~ 281 (722)
.+.++++...+++.++
T Consensus 211 rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 211 HPDPARLDQIAETERV 226 (227)
T ss_pred CCCHHHHHHHHHhhcC
Confidence 9999999999988765
No 148
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=63.34 E-value=55 Score=37.32 Aligned_cols=85 Identities=18% Similarity=0.111 Sum_probs=64.8
Q ss_pred EEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|.+.+...+ .......++.+++++....+-+.+.. ..+|+++..|+.++.......+..+...+++.+++.+.
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 150 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY-FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLI 150 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEE
Confidence 467887764443 33344578999999988877666543 34678899999999887777778899999999999999
Q ss_pred chhHHHHHH
Q 004952 451 TVPSLVKAW 459 (722)
Q Consensus 451 ~~P~~l~~l 459 (722)
..+..+..+
T Consensus 151 ~~~~~~~~~ 159 (570)
T PRK04319 151 TTPALLERK 159 (570)
T ss_pred EChhhhhcc
Confidence 988876544
No 149
>PLN03052 acetate--CoA ligase; Provisional
Probab=63.14 E-value=48 Score=39.24 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=70.4
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.++.+|++.-..+..|.+ ...+|.+.+.. .++......+++++|++..+++-+..+-.. +++++..|+..+.+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via-~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVII-YLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHH-HHHHHHcCCEEEeeCC
Confidence 457777654332221222 24578777644 344444567899999999988877655443 6789999999999887
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
...++.+...+++.++.++++...
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 778889999999999999988664
No 150
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=62.27 E-value=56 Score=36.60 Aligned_cols=101 Identities=16% Similarity=0.053 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++.... .|.. -.+|...+... +.......++.+++++....+-+..... .+|+++..|+..+..+.
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~-~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIF-CWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCeEEEEcCc
Confidence 457777654321 1211 24666665443 3333345789999999988777665443 36688999999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
....+.+...+++.+++.++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 77788899999999999999888765443
No 151
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=61.99 E-value=47 Score=38.50 Aligned_cols=97 Identities=16% Similarity=0.057 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++... .. ......+|.+.+...+ +......++.++|++....+-+...-.. +|+++..|+..+....
T Consensus 80 ~p~~~Al~~~~-~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~-~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEG-DD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVA-MLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEEC-CC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCCEEEecCC
Confidence 46777766422 11 1135678888775543 3334457899999999888777655443 6789999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
......+...+++.++.++++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 777889999999999999987553
No 152
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=61.86 E-value=42 Score=38.04 Aligned_cols=97 Identities=20% Similarity=0.138 Sum_probs=68.9
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++..- ++.++...+|.+.+... +.......++.+++++....+-+... ...+|+++..|+..+..+.
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecccc
Confidence 45777776433 23344457788776443 33334456899999999888877655 3447789999999988776
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
....+.+...++..+++.+.+...
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 667778899999999998876553
No 153
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=60.01 E-value=52 Score=38.02 Aligned_cols=97 Identities=18% Similarity=0.091 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++... ..+| ....+|.+.+... ++......+++++|++....+-+...- ..+++++..|+..+....
T Consensus 70 ~p~~~Al~~~~-~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEG-DEPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA-IAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEeccCC
Confidence 46777766432 2123 2456787776443 334445678999999998887765543 346788999999998877
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
...++.+...+++.++.++++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 777789999999999999987654
No 154
>PLN02246 4-coumarate--CoA ligase
Probab=59.83 E-value=52 Score=37.16 Aligned_cols=98 Identities=13% Similarity=0.017 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.++.+|++..- ++-.+|++.+...+. ......++.++|++....+-+...- ..+|+++..|++.+..+.
T Consensus 36 ~~~~~a~~~~~-------~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDGA-------TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFV-LAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEecC-------CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHH-HHHHHHHHcCEEEecCCC
Confidence 45777765321 223588887744433 3334568999999988877665433 336788899999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
......+...++..++..++........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 77778899999999999888766554433
No 155
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=59.11 E-value=58 Score=36.88 Aligned_cols=84 Identities=12% Similarity=-0.045 Sum_probs=64.2
Q ss_pred EeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhH
Q 004952 375 PWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 375 ~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
.+|.+.+...+......+.-.++|++...++-+..+.. .+|+++..|+..+..+......++...++..++.++++...
T Consensus 45 ~~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e~~~-~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~ 123 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVSKYPDQHIGIMMPASAGAYI-AYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQ 123 (539)
T ss_pred cccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchHHHH-HHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHH
Confidence 37888877766665555555689999888887766443 36799999999998876666788999999999999988776
Q ss_pred HHHHH
Q 004952 455 LVKAW 459 (722)
Q Consensus 455 ~l~~l 459 (722)
.+..+
T Consensus 124 ~~~~~ 128 (539)
T PRK06334 124 LMQHL 128 (539)
T ss_pred HHHHH
Confidence 65544
No 156
>PLN02654 acetate-CoA ligase
Probab=59.10 E-value=61 Score=37.89 Aligned_cols=97 Identities=13% Similarity=0.072 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.++.+|++ |.....| ....+|.+.+... ++......+++++|++..+++-+...- ..+|+++..|+..+....
T Consensus 102 ~~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v-~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 102 NGDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP-IAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCC
Confidence 35667765 3221111 2356888877443 344445678999999998887765443 346789999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
....+.+...++..++.++++...
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 777889999999999999987654
No 157
>PRK07514 malonyl-CoA synthase; Validated
Probab=58.97 E-value=60 Score=36.14 Aligned_cols=86 Identities=13% Similarity=0.041 Sum_probs=63.7
Q ss_pred eEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEE
Q 004952 373 AIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (722)
Q Consensus 373 gV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (722)
+..+|...+.. .++......++.++|++....+-+...- ..+|+++..|+..+..+.......+...++..+++++
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~-v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEAL-ALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 34677776643 3334445578999999988877765433 4467899999999988877777889999999999999
Q ss_pred echhHHHHHH
Q 004952 450 GTVPSLVKAW 459 (722)
Q Consensus 450 ~~~P~~l~~l 459 (722)
...+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887765543
No 158
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=58.95 E-value=64 Score=37.54 Aligned_cols=95 Identities=13% Similarity=-0.042 Sum_probs=68.6
Q ss_pred CCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCC
Q 004952 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (722)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~ 431 (722)
++.+|.+ |-+...+ ....+|.+.+.. .++......++.++|++..+++-+-..-.. +|+++..|+..+.....
T Consensus 75 ~~~~A~~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~-~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALI-YECPYLK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIA-MLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEE-EEcCCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH-HHHHHHhCcEEEeeCCC
Confidence 4666654 3221111 235688887644 444444567999999999888887655443 67899999999888877
Q ss_pred CChhhHHHHHHHhCCcEEechh
Q 004952 432 PLERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P 453 (722)
...+.+...|++.+++++++..
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 7888999999999999998764
No 159
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=58.89 E-value=46 Score=36.23 Aligned_cols=109 Identities=14% Similarity=0.057 Sum_probs=74.0
Q ss_pred ceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcE
Q 004952 372 KAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (722)
Q Consensus 372 KgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~ 448 (722)
-|+..|-+.++.. +++....+|+.+|||+..+.|-+.- .....+++-.+|..++-..+.....++.=.|++.++-+
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-WVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-HHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 3555676666543 3344467899999999876654432 22335577778888887765555566777899999999
Q ss_pred EechhHHHHH-----HHhc---------CCCCCCCccceeEEEeecC
Q 004952 449 LGTVPSLVKA-----WRNT---------NCLEGLDWTKIRSFASTGE 481 (722)
Q Consensus 449 l~~~P~~l~~-----l~~~---------~~~~~~~l~~Lr~i~~~Ge 481 (722)
++..|.+... |.+. +..+...++.|++++..+|
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 9999886533 3332 2234556889999999884
No 160
>PRK07798 acyl-CoA synthetase; Validated
Probab=58.86 E-value=65 Score=36.07 Aligned_cols=86 Identities=12% Similarity=-0.074 Sum_probs=62.0
Q ss_pred EEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
-.+|...+.. .+.......++.+++++....+-+.+.- ..+|+++..|+..+..+.......+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~-~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYV-EAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 3577777633 3444445578899999888776654433 33678889999999887777778899999999999998
Q ss_pred chhHHHHHHH
Q 004952 451 TVPSLVKAWR 460 (722)
Q Consensus 451 ~~P~~l~~l~ 460 (722)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8776554443
No 161
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=58.81 E-value=63 Score=37.65 Aligned_cols=95 Identities=14% Similarity=-0.080 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCC
Q 004952 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (722)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~ 431 (722)
++.+|++.... .| ....+|.+.+... ++......+++++|++..+.+-+...- ..+|+++..|+..+.+...
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v-~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETV-VAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCcEEEeeCCC
Confidence 56777654322 22 1356788776443 333445578999999998887765543 3477899999999988877
Q ss_pred CChhhHHHHHHHhCCcEEechhH
Q 004952 432 PLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
...+.+...++..++.++++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 77788999999999998887653
No 162
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.79 E-value=60 Score=36.20 Aligned_cols=84 Identities=15% Similarity=-0.042 Sum_probs=62.9
Q ss_pred eCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEech
Q 004952 376 WTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 376 ~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~ 452 (722)
+|.+.+...+ .......++++++++....+-+.+.- ..+|+++..|+..+..+.......+...+++.++..++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYL-EAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 7777764433 33334568899999998887776443 4477899999999988876677889999999999999888
Q ss_pred hHHHHHHH
Q 004952 453 PSLVKAWR 460 (722)
Q Consensus 453 P~~l~~l~ 460 (722)
......+.
T Consensus 111 ~~~~~~~~ 118 (521)
T PRK06187 111 SEFVPLLA 118 (521)
T ss_pred chHHHHHH
Confidence 77665543
No 163
>PRK05857 acyl-CoA synthetase; Validated
Probab=58.58 E-value=45 Score=37.77 Aligned_cols=94 Identities=12% Similarity=0.008 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|.+.. .| ...+|.+.+...+ +......++.+++++..+++-+...-.. +|+++..|+..+..+.
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~-~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLS-VLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHH-HHHHHHcCeEEEecCc
Confidence 4677766532 22 1357887764433 3333456889999999888777665444 6789999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSL 455 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~ 455 (722)
....+.+..+++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 7777889999999998888877653
No 164
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=58.50 E-value=62 Score=38.08 Aligned_cols=103 Identities=11% Similarity=-0.009 Sum_probs=73.2
Q ss_pred EEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|.+.+... +.......++.++|++..+++-+.... ...++++..|++.|.......++.+...+++.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWL-IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 34677666443 333344678999999988776655433 33668899999999887777788999999999999999
Q ss_pred chhHHHHHHHhcCCCCCCCccceeEEEeecC
Q 004952 451 TVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (722)
Q Consensus 451 ~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge 481 (722)
+....+..+.+... .+++++.+++-++
T Consensus 184 ~~~~~~~~l~~~~~----~~~~l~~ii~~~~ 210 (696)
T PLN02387 184 CDSKQLKKLIDISS----QLETVKRVIYMDD 210 (696)
T ss_pred ECHHHHHHHHHHhh----ccCCceEEEEECC
Confidence 98888777755321 2355666665443
No 165
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=57.61 E-value=63 Score=37.40 Aligned_cols=96 Identities=15% Similarity=0.042 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++ +.+..+|. .-.+|.+.+.. .++......++.++|++..+++-+...- ..+++++..|+..+....
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA-FAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCC
Confidence 45777765 33322332 34567777644 3334445678999999998887765443 336788999999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechh
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (722)
......+...|+..++.++++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 77778899999999999988754
No 166
>PRK06839 acyl-CoA synthetase; Validated
Probab=56.22 E-value=74 Score=35.31 Aligned_cols=96 Identities=16% Similarity=0.036 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhh----hcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEec
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~ 429 (722)
.|+.+|.+. .+..+|++.+...+..... ..++.+++++....+-+... +..+|+++..|+..+..+
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecC
Confidence 456676652 1456888777554443332 35788999998877776543 344678899999999887
Q ss_pred CCCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
....+..+...+++.+++.++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 666778888999999999999888766544
No 167
>PRK08316 acyl-CoA synthetase; Validated
Probab=56.06 E-value=65 Score=36.04 Aligned_cols=86 Identities=13% Similarity=0.086 Sum_probs=63.9
Q ss_pred EEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|...+...+. ......++.+++++....+-+...- ..+|+++..|+..+..+.......+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~-~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYA-LLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 4577776644433 3334468899999988887776543 44778999999999888666778899999999999998
Q ss_pred chhHHHHHHH
Q 004952 451 TVPSLVKAWR 460 (722)
Q Consensus 451 ~~P~~l~~l~ 460 (722)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 168
>PLN02574 4-coumarate--CoA ligase-like
Probab=55.58 E-value=71 Score=36.34 Aligned_cols=99 Identities=20% Similarity=0.125 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhh-cCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEec
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~ 429 (722)
.++.++++- +.+|. .+|.+.+.. .++..... .++.++|++....+-+..+- ..+|+++..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFP-VIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHH-HHHHHHHHhCeEEeCcC
Confidence 456666653 22222 467766533 33333344 78999999988877654433 33678999999999887
Q ss_pred CCCChhhHHHHHHHhCCcEEechhHHHHHHH
Q 004952 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (722)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (722)
.......+...+++.++..++..+..+..+.
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 6667778889999999998888877665543
No 169
>PRK07788 acyl-CoA synthetase; Validated
Probab=55.01 E-value=52 Score=37.28 Aligned_cols=84 Identities=14% Similarity=0.073 Sum_probs=63.1
Q ss_pred EeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+... +.......++.+++++....+-+... +..+|+++..|+..+..+.....+.+...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGF-VLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4777776443 33334456899999998877555432 3447789999999999987777889999999999999998
Q ss_pred hhHHHHHH
Q 004952 452 VPSLVKAW 459 (722)
Q Consensus 452 ~P~~l~~l 459 (722)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766655
No 170
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=54.67 E-value=75 Score=36.48 Aligned_cols=96 Identities=15% Similarity=-0.045 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.++++|.+.- +-.+|.+.+...+ .......++.+++++....+-+...- ..+|+++..|+..+..+.
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v-~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYL-AAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCcEEeecCC
Confidence 4577776541 2347777764443 33334568899999998887776553 447788999999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
....+.+...+++.++..++........+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 66778899999999999998877655444
No 171
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=54.56 E-value=62 Score=36.50 Aligned_cols=97 Identities=11% Similarity=-0.021 Sum_probs=72.6
Q ss_pred eEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhh---cC--CCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCC
Q 004952 358 VVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---ID--LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (722)
Q Consensus 358 ~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~---~~--~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~ 432 (722)
+.++.-.+. |..+|++.+...+...... .+ ++.+|++...+|-+..+... .+++++.|+.+.-.....
T Consensus 34 ~~~i~~~~~------g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~-~la~~~~Ga~~~~~Np~~ 106 (537)
T KOG1176|consen 34 TSLVYQDSD------GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL-ALAVPMAGAVLNPLNPRL 106 (537)
T ss_pred ceEEEecCC------CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCccccccCccc
Confidence 455544443 8899998875554444333 33 78899999998887766554 568899999998887777
Q ss_pred ChhhHHHHHHHhCCcEEechhHHHHHHHh
Q 004952 433 LERSFGKFVQDAGVTVLGTVPSLVKAWRN 461 (722)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~P~~l~~l~~ 461 (722)
+...+...++.-++++++.....+..+..
T Consensus 107 ~~~ei~~~~~~s~~kiif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 107 TASEIAKQLKDSKPKLIFVDEDFYDKISE 135 (537)
T ss_pred CHHHHHHHHHhcCCeEEEEcCchHHHHHH
Confidence 88899999999999999997777766643
No 172
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=54.53 E-value=51 Score=42.39 Aligned_cols=98 Identities=16% Similarity=0.046 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++...+...+......+|.+.+... ++......++.+++++..+.+-+...- ..+++++..|+..+..+.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i-~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLV-VAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHH-HHHHHHHhhCcEEeccCC
Confidence 4677777643322111122446888776443 334444568999999988887776553 347799999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEech
Q 004952 431 SPLERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (722)
...+.++...++..++.+++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 7777788889999998887764
No 173
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=54.05 E-value=1.4e+02 Score=35.50 Aligned_cols=118 Identities=10% Similarity=0.023 Sum_probs=78.0
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHH---hhhh---cCCCCC-----------CEEEEecCccccchhHHHH
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAH---IDLKVG-----------DVYCWPTNLGWVMGPVILF 416 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~---~~~~---~~~~~~-----------d~~l~~~~~~~~~~~~~~~ 416 (722)
.|+.+|++.... |.+ ...+|.+.+...+.. .... .|+.++ |++..+++-+... +...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew-~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW-LVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH-HHHHH
Confidence 457777753322 221 235777765443332 2232 378887 8887766554332 23366
Q ss_pred HHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEeec
Q 004952 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (722)
Q Consensus 417 ~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~G 480 (722)
+++..|++.|.......++.+...+++-++.++++.+..+..+.... ..++.|+.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 88999999998877778889999999999999999888887776532 1246677776544
No 174
>PRK13388 acyl-CoA synthetase; Provisional
Probab=53.93 E-value=88 Score=35.37 Aligned_cols=84 Identities=13% Similarity=-0.068 Sum_probs=62.5
Q ss_pred EeCChHHHHHHHHh---hhhcCC-CCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 375 PWTQLSSIRCTAEG---WAHIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 375 ~~th~~~~~~~~~~---~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
.+|...+...+... ....++ .+++++...++-+...-. .+++++..|+..+..+.....+.+...+++.++.+++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~-~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLF-WLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHH-HHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 67887765544333 344677 689999888877766444 4778999999999888777778899999999999998
Q ss_pred chhHHHHHH
Q 004952 451 TVPSLVKAW 459 (722)
Q Consensus 451 ~~P~~l~~l 459 (722)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876654433
No 175
>PRK08315 AMP-binding domain protein; Validated
Probab=53.66 E-value=68 Score=36.35 Aligned_cols=92 Identities=14% Similarity=0.052 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCC
Q 004952 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (722)
Q Consensus 355 ~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~ 431 (722)
++.+|.+.... +..+|++.+...+ .......++.+++++....+-+..+ +..+|+++..|+..+..+..
T Consensus 30 ~~~~ai~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~ 101 (559)
T PRK08315 30 PDREALVYRDQ-------GLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEW-VLTQFATAKIGAILVTINPA 101 (559)
T ss_pred CCCeEEEEcCC-------CeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCeEEEecCcc
Confidence 46666554322 2347888775443 3333456889999998887766544 34477999999999988877
Q ss_pred CChhhHHHHHHHhCCcEEechhH
Q 004952 432 PLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
.....+...+++.+++.++..+.
T Consensus 102 ~~~~~~~~~l~~~~~~~ii~~~~ 124 (559)
T PRK08315 102 YRLSELEYALNQSGCKALIAADG 124 (559)
T ss_pred CCHHHHHHHHHhcCCCEEEEecc
Confidence 77788999999999999887654
No 176
>PRK07529 AMP-binding domain protein; Validated
Probab=52.79 E-value=75 Score=36.84 Aligned_cols=96 Identities=17% Similarity=0.102 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|.+.+..+.. ..++..+|.+.+.. .++......+++++|++....+-+...- ..+|+++..|. ++....
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~-~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETH-FALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCE-EEeCCC
Confidence 457777765533221 12355678877644 3334445678999999998888776543 44667777874 444455
Q ss_pred CCChhhHHHHHHHhCCcEEech
Q 004952 431 SPLERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (722)
...++.+...+++.++.+++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 5677889999999999998875
No 177
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=52.73 E-value=87 Score=36.51 Aligned_cols=93 Identities=16% Similarity=-0.030 Sum_probs=66.4
Q ss_pred CCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCC
Q 004952 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (722)
Q Consensus 356 ~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~ 432 (722)
+++|.+... .+|. ...+|.+.+... ++......+++++|++..+++-+...... +++++..|+..+......
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~-~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVA-MLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH-HHHHHHhCeEEEecCCCC
Confidence 556654432 2232 345787776443 33344557899999999888877554443 678999999998887777
Q ss_pred ChhhHHHHHHHhCCcEEechh
Q 004952 433 LERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~P 453 (722)
..+.+...+++.++.++++..
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEcc
Confidence 778899999999999988754
No 178
>PRK13383 acyl-CoA synthetase; Provisional
Probab=51.44 E-value=60 Score=36.42 Aligned_cols=84 Identities=10% Similarity=-0.004 Sum_probs=62.3
Q ss_pred EeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|-+.+... +.......++.+++++....+-+.+.- ..+|+++..|+..+..+.....+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~-~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFV-TAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4666665433 333334568899999988776655433 346788999999999887777889999999999999998
Q ss_pred hhHHHHHH
Q 004952 452 VPSLVKAW 459 (722)
Q Consensus 452 ~P~~l~~l 459 (722)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87766554
No 179
>PRK07470 acyl-CoA synthetase; Validated
Probab=51.43 E-value=83 Score=35.33 Aligned_cols=82 Identities=15% Similarity=0.063 Sum_probs=61.1
Q ss_pred EEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|.+.+... +.......++.+++++....+-+...... +++++..|+..+..+.......+...+++.+++.++
T Consensus 31 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 109 (528)
T PRK07470 31 RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFES-MFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMI 109 (528)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH-HHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEE
Confidence 35777776443 33334456889999998887776654433 678899999998888777778899999999999998
Q ss_pred chhHHH
Q 004952 451 TVPSLV 456 (722)
Q Consensus 451 ~~P~~l 456 (722)
..+...
T Consensus 110 ~~~~~~ 115 (528)
T PRK07470 110 CHADFP 115 (528)
T ss_pred EcchhH
Confidence 876543
No 180
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=51.25 E-value=57 Score=37.76 Aligned_cols=96 Identities=15% Similarity=0.046 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++ +-+..+|. .-.+|.+.+.. .++......++.++|++..+++-+...- ..+++++..|+..+....
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v-~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV-FAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEecCC
Confidence 35667755 43323332 34578777643 4444455679999999998888775443 347789999999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechh
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (722)
......+...|+..++.++++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 77778899999999999888754
No 181
>PLN02614 long-chain acyl-CoA synthetase
Probab=50.96 E-value=1.1e+02 Score=35.73 Aligned_cols=87 Identities=5% Similarity=-0.149 Sum_probs=64.8
Q ss_pred EEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|.+.+.. .++......++.++|++...++-+.... ...|+++..|+..|.......++.+...+++.++++++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWI-ISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 3467776644 3344445678999999988777665433 33678899999999888777788999999999999999
Q ss_pred chhHHHHHHHh
Q 004952 451 TVPSLVKAWRN 461 (722)
Q Consensus 451 ~~P~~l~~l~~ 461 (722)
.....+..+..
T Consensus 157 ~~~~~~~~~~~ 167 (666)
T PLN02614 157 VEEKKISELFK 167 (666)
T ss_pred ECHHHHHHHHH
Confidence 98776655543
No 182
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.58 E-value=68 Score=35.72 Aligned_cols=83 Identities=18% Similarity=0.073 Sum_probs=61.3
Q ss_pred eCChHHH---HHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEech
Q 004952 376 WTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 376 ~th~~~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~ 452 (722)
+|...+. ..+.......++++++++....+-+.+.-.. +++++..|+..+..+.......+...+++.+++.++..
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~-~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEV-YWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHH-HHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 5555553 3333344556889999999888777655443 77899999999988766667788899999999999887
Q ss_pred hHHHHHH
Q 004952 453 PSLVKAW 459 (722)
Q Consensus 453 P~~l~~l 459 (722)
+.....+
T Consensus 91 ~~~~~~~ 97 (502)
T PRK08276 91 AALADTA 97 (502)
T ss_pred cchhhHH
Confidence 7666554
No 183
>PRK13391 acyl-CoA synthetase; Provisional
Probab=49.76 E-value=1e+02 Score=34.47 Aligned_cols=97 Identities=18% Similarity=0.065 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.++.+.+.+| -.+|...+...+ .......++.+++++..+.+-+...-.. +|+++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~-~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEV-CWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH-HHHHHHhccEEecccc
Confidence 4567776655443 237776664433 3333446888999998887776554433 6688999999998877
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (722)
......+...+++.++..+.+.+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 7777889999999999999887765543
No 184
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=49.48 E-value=79 Score=35.79 Aligned_cols=86 Identities=16% Similarity=0.177 Sum_probs=65.7
Q ss_pred EeCChHHHHHHHH---hhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+.. .....++.+++++....+-+.+. +..+|+++..|+..+..+.......+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 4676666444333 33456889999998888777665 3447799999999999887777889999999999999999
Q ss_pred hhHHHHHHHh
Q 004952 452 VPSLVKAWRN 461 (722)
Q Consensus 452 ~P~~l~~l~~ 461 (722)
.+.....+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877665543
No 185
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=49.31 E-value=89 Score=35.44 Aligned_cols=95 Identities=9% Similarity=-0.046 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++.. +..+|...+...+. ......++.++|++....+-+...-. .+|+++..|+..+..+.
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~-~~la~~~~G~~~v~v~~ 105 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPV-AIAAVLRAGYVVVNVNP 105 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHH-HHHHHHhcCeEEeccCc
Confidence 3566666532 24678887755443 33344689999999887766654433 35788999999998876
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (722)
......+...+++.+++.++........
T Consensus 106 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 133 (557)
T PRK07059 106 LYTPRELEHQLKDSGAEAIVVLENFATT 133 (557)
T ss_pred ccCHHHHHHHHHccCceEEEEchhhHHH
Confidence 6677889999999999999887665443
No 186
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=49.08 E-value=84 Score=35.64 Aligned_cols=95 Identities=17% Similarity=0.094 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhh----hhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEec
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~ 429 (722)
.++.+|++.. | -.+|.+.+...+.... ...++++++++....+-+...- ..+|+++..|++.+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP-IATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEeccC
Confidence 4567776532 2 2478777655443333 2468999999988877775543 44678899999999887
Q ss_pred CCCChhhHHHHHHHhCCcEEechhHHHHH
Q 004952 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (722)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (722)
.......+...+.+.+++.++........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 77777888899999999999887665443
No 187
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=48.94 E-value=88 Score=35.26 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=65.8
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++.+-..+ ..+..+|.+.+... +.......++.+++++....+-+...- ..+|+++..|+.++..+.
T Consensus 35 ~p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 35 CPDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFT-ALYLACARIGAVLNPLMP 110 (538)
T ss_pred CCCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHhcCEEEeccCc
Confidence 35667766542211 11346788776443 333344568899999988877665543 336788999999887766
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
......+...++..+++.+++.+.
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 666778889999999998887553
No 188
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=48.74 E-value=74 Score=35.99 Aligned_cols=97 Identities=18% Similarity=0.109 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|.+--. + +..+|.+.+...+. ......++.+++++....+-+.... ..+|+++..|+..+..+.
T Consensus 41 ~p~~~a~~~~~---~----~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAV---T----GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecC---C----CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCc
Confidence 35667665222 1 24578887754433 3334568899999988877766544 336789999999887776
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (722)
......+...+++.++.++...+..+..
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhhh
Confidence 6666788899999999888776654443
No 189
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=48.21 E-value=61 Score=34.75 Aligned_cols=67 Identities=16% Similarity=0.122 Sum_probs=54.3
Q ss_pred cCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 392 IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 392 ~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
.++.++|++....+-+... +..+++++..|+.++..+.......+...+++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~~-~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAEL-VVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 6789999998887777543 344778899999999888777778899999999999999988766544
No 190
>PLN03102 acyl-activating enzyme; Provisional
Probab=47.76 E-value=62 Score=37.05 Aligned_cols=83 Identities=14% Similarity=0.045 Sum_probs=61.5
Q ss_pred EeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+. ......++.++|++...++-+...- ..+|+++..|++++..+.....+.+...+++.+++++++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~-~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMY-EMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 467776644433 3334568999999988877655433 336788999999988887778889999999999999998
Q ss_pred hhHHHHH
Q 004952 452 VPSLVKA 458 (722)
Q Consensus 452 ~P~~l~~ 458 (722)
.+.....
T Consensus 118 ~~~~~~~ 124 (579)
T PLN03102 118 DRSFEPL 124 (579)
T ss_pred ChhhHHH
Confidence 7655433
No 191
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.72 E-value=88 Score=35.54 Aligned_cols=94 Identities=15% Similarity=0.036 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhh---hh-cCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEec
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~---~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~ 429 (722)
.|+.+|.+. . +..+|.+.+...+.... .. .++.++|++....+-+...- ..+|+++..|+..+..+
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~-~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYP-VAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEeecC
Confidence 356666652 1 23578887755444333 22 47899999998877765443 33778999999999887
Q ss_pred CCCChhhHHHHHHHhCCcEEechhHHHH
Q 004952 430 GSPLERSFGKFVQDAGVTVLGTVPSLVK 457 (722)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (722)
.......+...+++.++.+++.......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhh
Confidence 6667788999999999999887655443
No 192
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=47.48 E-value=1.1e+02 Score=35.60 Aligned_cols=120 Identities=9% Similarity=-0.070 Sum_probs=76.0
Q ss_pred CCCCeEEEEc--CCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEe
Q 004952 354 PVDAVVNILF--SSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (722)
Q Consensus 354 ~~~~~a~il~--TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~ 428 (722)
.|+.+|+... ..|..|.- ..+|.+.+...+ +......++.++|++..+++-+.... ...|+++..|+..|..
T Consensus 55 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~-~~~lA~~~~G~v~vpl 131 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWI-VAMEACAAHSLICVPL 131 (660)
T ss_pred CCCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEe
Confidence 3456665432 23333321 235776654433 33344568999999987776664433 3366899999999988
Q ss_pred cCCCChhhHHHHHHHhCCcEEechhHHHHHHHhcCCCCCCCccceeEEEee
Q 004952 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (722)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~ 479 (722)
.....++.+...++..++++++.....+..++.... ...+.++.+++-
T Consensus 132 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 132 YDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred ccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhc---ccCCCceEEEEE
Confidence 777778899999999999999987765544433211 113456666544
No 193
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=46.81 E-value=1e+02 Score=34.74 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=62.3
Q ss_pred EeCChHHHHHHHH---hhhhc-CCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 375 PWTQLSSIRCTAE---GWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 375 ~~th~~~~~~~~~---~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
.+|.+.+...+.. ..... ++.+++++....+-+... +..+|+++..|+..+..+.......+...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQF-VIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHH-HHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 4787776444332 23334 899999998887766432 344778899999999888766778899999999999998
Q ss_pred chhHHHHHHH
Q 004952 451 TVPSLVKAWR 460 (722)
Q Consensus 451 ~~P~~l~~l~ 460 (722)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877655443
No 194
>PRK12583 acyl-CoA synthetase; Provisional
Probab=46.77 E-value=1e+02 Score=34.77 Aligned_cols=93 Identities=13% Similarity=0.015 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+++|++..- ++..+|.+.+...+. ......++.+++++....+-+... +...|+++..|+..+..+.
T Consensus 31 ~p~~~a~~~~~-------~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~v~l~~ 102 (558)
T PRK12583 31 FPDREALVVRH-------QALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEW-LLTQFATARIGAILVNINP 102 (558)
T ss_pred CCCCeEEEecC-------CCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhhCCEEEecCC
Confidence 45667665421 123578877644433 333456889999998877666543 3447789999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
......+...+++.+++.+++.+.
T Consensus 103 ~~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 103 AYRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred CCCHHHHHHHHHhcCCcEEEEecc
Confidence 777889999999999999887764
No 195
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=46.64 E-value=82 Score=35.60 Aligned_cols=90 Identities=12% Similarity=0.026 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.++++ +.. | ..+|.+.+...+ .......++.++|++....+-+... +..+++++..|+..+..+.
T Consensus 36 ~pd~~a~~-~~~---~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVV-DNH---G----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEF-TIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEE-cCC---C----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccch
Confidence 45777755 322 2 356777764433 3333457899999998877665433 3447799999999988876
Q ss_pred CCChhhHHHHHHHhCCcEEech
Q 004952 431 SPLERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (722)
......+...++..++.++++.
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 6677788899999998888764
No 196
>PRK09088 acyl-CoA synthetase; Validated
Probab=46.34 E-value=1.2e+02 Score=33.63 Aligned_cols=92 Identities=13% Similarity=0.020 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.++++-...| ..+|...+...+ .......++.+++++....+-+...- ..+|+++..|+..+..+.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~-~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLV-ALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEEeeCc
Confidence 4566666543333 357877764443 33334568899999988877776543 346788999999998877
Q ss_pred CCChhhHHHHHHHhCCcEEechh
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (722)
......+...+++.+++.++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 77778899999999999987654
No 197
>PRK06164 acyl-CoA synthetase; Validated
Probab=46.28 E-value=80 Score=35.57 Aligned_cols=91 Identities=15% Similarity=0.000 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|++.|++ . +.-.+|.+.+... +.......++.+++++....+-+...-. ..|+++..|+..+..+.
T Consensus 23 ~p~~~a~~-~--------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~-~~la~~~~G~~~v~l~~ 92 (540)
T PRK06164 23 RPDAVALI-D--------EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVV-LFLACARLGATVIAVNT 92 (540)
T ss_pred CCCCeEEe-c--------CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHH-HHHHHHHhCcEEEecCC
Confidence 45677765 1 1234777766433 3333345788999999888777755433 36788999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
......+...+++.+++.++..+.
T Consensus 93 ~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 93 RYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred CCCcHHHHHHHHhcCccEEEEccc
Confidence 777788999999999999887654
No 198
>PRK13390 acyl-CoA synthetase; Provisional
Probab=46.12 E-value=1.3e+02 Score=33.37 Aligned_cols=93 Identities=17% Similarity=0.100 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++... +| ..+|.+.+...+ .......++.++|++....+-+.+.-. .+|+++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~-~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALV-VLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH-HHHHHHHhCCEEecccc
Confidence 45777765422 22 357887764433 333445689999999888777765433 37788999999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
...+..+...++..++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 777788888899888888876544
No 199
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=45.53 E-value=74 Score=35.52 Aligned_cols=84 Identities=14% Similarity=0.106 Sum_probs=62.6
Q ss_pred EeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+ .......++.+++++....+-+...... +|+++..|+..+..+.......+...+++.++..++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTA-MFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH-HHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 57887764433 3333456788999998888777655444 6788999999988887777888999999999999988
Q ss_pred hhHHHHHH
Q 004952 452 VPSLVKAW 459 (722)
Q Consensus 452 ~P~~l~~l 459 (722)
.+..+..+
T Consensus 104 ~~~~~~~~ 111 (515)
T TIGR03098 104 SSERLDLL 111 (515)
T ss_pred ccchhhhh
Confidence 77655443
No 200
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.29 E-value=1.7e+02 Score=33.02 Aligned_cols=93 Identities=18% Similarity=0.138 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHH---hhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.++.++++...-+. .+|.+.+...+.. .....++.++|++...++-+..+ +..+|+++..|+..+....
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCc
Confidence 45666666554333 7888877554433 33445588999988777655433 3447788999999999987
Q ss_pred CCChhhHHHHHHHhCCcEEechhH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
...+..+...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 667778888888888888888765
No 201
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.94 E-value=96 Score=35.32 Aligned_cols=84 Identities=12% Similarity=-0.009 Sum_probs=63.5
Q ss_pred EeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+. ......+++.+|++....+-+... +..+|+++..|+..+..+.....+.+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 477777644433 333456889999998887776653 3447788999999998877777889999999999999998
Q ss_pred hhHHHHHH
Q 004952 452 VPSLVKAW 459 (722)
Q Consensus 452 ~P~~l~~l 459 (722)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 202
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=43.68 E-value=1.6e+02 Score=32.38 Aligned_cols=94 Identities=17% Similarity=0.048 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++.. .-.+|...+...+. ......++.+++++....+-+.+. +..+++++..|+..+..+.
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCc
Confidence 4577776532 13577777644433 333456788999998888777664 4557799999999999887
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (722)
......+...+++.++..++.......
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 111 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFEA 111 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhhH
Confidence 777788889999999888876654443
No 203
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=42.79 E-value=1e+02 Score=36.00 Aligned_cols=86 Identities=9% Similarity=-0.104 Sum_probs=64.1
Q ss_pred EEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|.+.+...+ +......++.++|++...++-+..... ..|+++..|+..|-.......+.+...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~-~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWII-AMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 457877764443 334455789999999888776655433 3678999999999887777778999999999999999
Q ss_pred chhHHHHHHH
Q 004952 451 TVPSLVKAWR 460 (722)
Q Consensus 451 ~~P~~l~~l~ 460 (722)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8766655543
No 204
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=42.64 E-value=1.3e+02 Score=33.96 Aligned_cols=100 Identities=13% Similarity=0.006 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.++++.-.-|+ ...+|.+.+... +.......++.++|++....+-+...... +++++..|+..+..+.
T Consensus 23 ~~~~~~~~~~~~~~-----~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~-~la~~~~G~~~v~l~~ 96 (542)
T PRK06018 23 HGNREVVTRSVEGP-----IVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEA-WYGIMGIGAICHTVNP 96 (542)
T ss_pred CCCceEEEeeccCC-----ceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHH-HHHHHhcCeEeecccc
Confidence 45666665211121 345787776443 33334457899999998887777665443 6688889999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
....+.+...+++.++..+++.......+
T Consensus 97 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 125 (542)
T PRK06018 97 RLFPEQIAWIINHAEDRVVITDLTFVPIL 125 (542)
T ss_pred ccCHHHHHHHHhccCCCEEEEccccHHHH
Confidence 77778899999999999988766544333
No 205
>PLN02479 acetate-CoA ligase
Probab=41.87 E-value=1.1e+02 Score=34.85 Aligned_cols=93 Identities=11% Similarity=0.010 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++. +. ..+|.+.+... ++......++.++|++....+-+.+.-. ..++++..|+..+..+.
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~-~~la~~~~G~v~v~l~~ 102 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYE-AHFGVPMAGAVVNCVNI 102 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHH-HHHHHHhCCcEEEEecc
Confidence 456676653 21 24676665443 3333445689999999888877665433 36788999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l 456 (722)
......+...+++.++..++..+..+
T Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 103 RLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhh
Confidence 77778899999999999999877654
No 206
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=41.41 E-value=94 Score=35.33 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=58.6
Q ss_pred EEeCChHHHHHHHHhhh---h-cCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEE
Q 004952 374 IPWTQLSSIRCTAEGWA---H-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (722)
Q Consensus 374 V~~th~~~~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (722)
..+|...+...+..... . .++.++|++..+.+-+... +..+|+++..|+..+..........+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 35777776544433332 2 4789999998877766553 34467889999998887766677889999999999988
Q ss_pred echhHH
Q 004952 450 GTVPSL 455 (722)
Q Consensus 450 ~~~P~~ 455 (722)
...+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876544
No 207
>PRK05850 acyl-CoA synthetase; Validated
Probab=41.07 E-value=2.3e+02 Score=32.14 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCCCCCCCc--eEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEe
Q 004952 354 PVDAVVNILFSSGTTGEPK--AIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PK--gV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~ 428 (722)
.|+.+|.+.... .+.++ ...+|.+.+...+. ......+ .++|++....+-+...- ..+++++..|+.++..
T Consensus 14 ~p~~~a~~~~~~--~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~-~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDY--EQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYI-VAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEcc--CCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHH-HHHHHHHHcCceEEec
Confidence 456676653211 11122 24678877644333 2333445 57899988887765443 3377889999999988
Q ss_pred cC---CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 429 QG---SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 429 ~~---~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
+. ......+...|++.++.+++..+.....+
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 64 22456788999999999999988766554
No 208
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=40.61 E-value=1e+02 Score=28.85 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=37.9
Q ss_pred hHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhhc
Q 004952 624 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKL 685 (722)
Q Consensus 624 ~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~~ 685 (722)
..+|+..+. +.|+|.+|.|+...+ ..+||+-+- .. ....+++++.+.+.+.+..
T Consensus 77 a~~i~~~v~-~~~~V~~A~vvv~~~-----~a~Vav~~~-~~-~~~~~~i~~~V~~~v~~~~ 130 (177)
T PF09580_consen 77 ADRIANRVK-KVPGVEDATVVVTDD-----NAYVAVDLD-FN-RFNTKKIKKKVEKAVKSAD 130 (177)
T ss_pred HHHHHHHHh-cCCCceEEEEEEECC-----EEEEEEEec-cc-ccchhHHHHHHHHHHHHhC
Confidence 467888884 999999999998743 566666554 22 3445788888888776544
No 209
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=40.61 E-value=2.3e+02 Score=28.54 Aligned_cols=77 Identities=12% Similarity=0.191 Sum_probs=50.9
Q ss_pred cHHHHHH-HHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHh------C--cEEEecCCC---CCHHHHHHHH
Q 004952 211 TYKELRE-QVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILA------G--YVVVSIADS---FAAREIATRL 276 (722)
Q Consensus 211 TY~eL~~-~~~~lA~~L~~~--v~~gd~V~l~~~~s~~~vv~~lA~~~a------G--a~~vpl~p~---~~~~~l~~~l 276 (722)
++..+.+ -.+++.+.+.+. +.+|++|+|.++-+.|.++.+..+... | ...+-+|.. +..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3444444 344556667776 899999999999999998876655442 1 344455553 3445566777
Q ss_pred HhcCceEEEec
Q 004952 277 RVSKAKGIFTQ 287 (722)
Q Consensus 277 ~~~~~~~il~~ 287 (722)
+..+..+.+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 77787776654
No 210
>PRK08162 acyl-CoA synthetase; Validated
Probab=40.38 E-value=96 Score=35.01 Aligned_cols=84 Identities=14% Similarity=-0.027 Sum_probs=63.3
Q ss_pred EeCChHHHHHHHHh---hhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+... ....++.++|++....+-+..... .+|+++..|+..+..+.......+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~-~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVE-AHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHH-HHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 57887765443333 344688999999888877765443 36788999999888877777788999999999999998
Q ss_pred hhHHHHHH
Q 004952 452 VPSLVKAW 459 (722)
Q Consensus 452 ~P~~l~~l 459 (722)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87765544
No 211
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=39.93 E-value=2.4e+02 Score=32.39 Aligned_cols=101 Identities=16% Similarity=0.045 Sum_probs=64.9
Q ss_pred CCCCeEEEEcC--CCCCCCCceEEeCChHHHHHHHHhh---hhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEe
Q 004952 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (722)
Q Consensus 354 ~~~~~a~il~T--SGSTG~PKgV~~th~~~~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~ 428 (722)
.++.+|++.-. .+++|. ...+|.+.+...+.... ... +.++|++....+-+... +..+|+++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhH-HHHHHHHHHcCceeEec
Confidence 35677765421 122332 34578777644333222 223 78999998888777543 34467899999998866
Q ss_pred -cCCCC--hhhHHHHHHHhCCcEEechhHHHHH
Q 004952 429 -QGSPL--ERSFGKFVQDAGVTVLGTVPSLVKA 458 (722)
Q Consensus 429 -~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (722)
+.... .+.+...|++.++.++++.+.....
T Consensus 123 ~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 123 FAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 33322 5678899999999999987765543
No 212
>PRK13382 acyl-CoA synthetase; Provisional
Probab=39.88 E-value=1.3e+02 Score=33.83 Aligned_cols=94 Identities=14% Similarity=-0.106 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++- .+ -.+|...+... ++......++.+++++....+-+.. .+..+|+++..|+..+..+.
T Consensus 56 ~p~~~a~~~--~~-------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~ 125 (537)
T PRK13382 56 CPDRPGLID--EL-------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNT 125 (537)
T ss_pred CCCCeEEEe--CC-------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCc
Confidence 456777652 11 14776665443 3333345688999999888876665 34557788999999998876
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (722)
......+...+++.++++++.......
T Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~ 152 (537)
T PRK13382 126 SFAGPALAEVVTREGVDTVIYDEEFSA 152 (537)
T ss_pred ccCHHHHHHHHHhcCCCEEEEchhhHH
Confidence 666788999999999999887655443
No 213
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=39.81 E-value=82 Score=35.85 Aligned_cols=79 Identities=15% Similarity=-0.019 Sum_probs=59.4
Q ss_pred EeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+ .......++.++|++....+-+...-. .+|+++..|+..+..+.....+.+...+++.++++++.
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~-~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLE-WLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 46777664433 333445789999999988777655433 36788999999998887777888999999999998887
Q ss_pred hhH
Q 004952 452 VPS 454 (722)
Q Consensus 452 ~P~ 454 (722)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 214
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=38.54 E-value=98 Score=33.58 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=53.9
Q ss_pred HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEechhH
Q 004952 385 TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 454 (722)
Q Consensus 385 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~ 454 (722)
+.......++.++|++....+-+.+. +..+|+++..|+..+..+.......+...+++.++..+...+.
T Consensus 12 ~a~~l~~~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 12 LAKALKAQGIRSGSRVALVGQNSIEM-VLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 33334557899999999888777653 3447799999999999887777788889999999998876654
No 215
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=37.98 E-value=1e+02 Score=34.35 Aligned_cols=85 Identities=14% Similarity=0.096 Sum_probs=62.6
Q ss_pred EeCChHH---HHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSS---IRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~---~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|...+ ++.+.......++.+++++..+.+-+...- ..+++++..|+..+..+.......+...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFF-EAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 3555555 333444445578999999998887776543 346688899999998877777788999999999999998
Q ss_pred hhHHHHHHH
Q 004952 452 VPSLVKAWR 460 (722)
Q Consensus 452 ~P~~l~~l~ 460 (722)
.......+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 776666543
No 216
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=37.19 E-value=1.3e+02 Score=27.84 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=35.0
Q ss_pred HHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHh
Q 004952 625 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 683 (722)
Q Consensus 625 ~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~ 683 (722)
..|.+.+ .+.|+|.+|.|+...+ ..+|++-.-......-.+++++.+.+.+.+
T Consensus 57 ~~Ia~~v-~~v~~V~dA~vvVtg~-----~A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 57 DEIASEA-AKVKGVKDATVVITGN-----YAYVGVDLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHH-hcCCCCceEEEEEECC-----EEEEEEEcCCCcchhhHHHHHHHHHHHHHh
Confidence 4566666 4999999999998643 666776433222122246788888877765
No 217
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=36.13 E-value=1.8e+02 Score=33.45 Aligned_cols=95 Identities=8% Similarity=-0.039 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.++++.. +..| ....+|.+.+...+. ......++.++|++....+-+...- ...|+++..|++++..+.
T Consensus 52 ~p~~~a~~~~--~~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~ 126 (614)
T PRK08180 52 APDRVFLAER--GADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHA-LLALAAMYAGVPYAPVSP 126 (614)
T ss_pred CCCCceeeec--cCCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCeEeeecc
Confidence 4566766543 1122 235678877655443 3334568999999988877665543 336788999999998865
Q ss_pred CCC-----hhhHHHHHHHhCCcEEechh
Q 004952 431 SPL-----ERSFGKFVQDAGVTVLGTVP 453 (722)
Q Consensus 431 ~~~-----~~~l~~~i~~~~vt~l~~~P 453 (722)
... ...+...+++.++.+++...
T Consensus 127 ~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 127 AYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 443 56788888888888887753
No 218
>PRK06178 acyl-CoA synthetase; Validated
Probab=35.63 E-value=1.5e+02 Score=33.58 Aligned_cols=85 Identities=15% Similarity=0.010 Sum_probs=63.6
Q ss_pred EeCChHHHHHHHH---hhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|...+...+.. .....++++++++....+-+.... ..+|+++..|+..+..+.......+...+++.++.++++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH-IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH-HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 4777776444333 334568899999988877776543 446788899999888776667788999999999999999
Q ss_pred hhHHHHHHH
Q 004952 452 VPSLVKAWR 460 (722)
Q Consensus 452 ~P~~l~~l~ 460 (722)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 888766554
No 219
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.36 E-value=4.2e+02 Score=25.37 Aligned_cols=109 Identities=13% Similarity=0.015 Sum_probs=0.0
Q ss_pred hHHHHHHHHhhhhcCCCCCCEEEEecCcc--ccchhHHHHHHh-hcCCEEEEecCCCChhhHHHHHHHhCCcEEechh--
Q 004952 379 LSSIRCTAEGWAHIDLKVGDVYCWPTNLG--WVMGPVILFSSF-LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP-- 453 (722)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~--~~~~~~~~~~~L-~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P-- 453 (722)
+..+..+......-......+++..+..+ |+.|...+-..| ..|-.++.......++.+.+.+.++++.++.++-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred ----HHHHHHHhcCCCCCC--CccceeEEEeecCCCCcchHHHH
Q 004952 454 ----SLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWL 491 (722)
Q Consensus 454 ----~~l~~l~~~~~~~~~--~l~~Lr~i~~~Ge~l~~~~~~~~ 491 (722)
..++.+++....... +.+ |++||.+++.+..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~~----i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKVK----VMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCCe----EEEECCcCCHHHHHHc
No 220
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=32.74 E-value=1.8e+02 Score=32.34 Aligned_cols=96 Identities=8% Similarity=-0.003 Sum_probs=65.8
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++- + +-.+|...+...+ .......++.+++++....+-+... +..+|+++..|+..+..+.
T Consensus 18 ~p~~~a~~~--~-------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~-~~~~~a~~~~G~~~v~l~~ 87 (508)
T TIGR02262 18 RGGKTAFID--D-------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDF-PIAFLGAIRAGIVPVALNT 87 (508)
T ss_pred cCCceEEEe--C-------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeeccC
Confidence 456677652 1 1246666654333 3333456889999988776555432 2446788999999988877
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
......+...+++.+++.++........+
T Consensus 88 ~~~~~~l~~~~~~~~~~~~i~~~~~~~~~ 116 (508)
T TIGR02262 88 LLTADDYAYMLEDSRARVVFVSGELLPVI 116 (508)
T ss_pred CCCHHHHHHHHHhcCCeEEEEchhhHHHH
Confidence 77788999999999999998877655443
No 221
>PRK07867 acyl-CoA synthetase; Validated
Probab=32.64 E-value=1.8e+02 Score=32.76 Aligned_cols=83 Identities=11% Similarity=-0.036 Sum_probs=59.5
Q ss_pred EeCChHHHHHHHHh---hhh-cCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 375 PWTQLSSIRCTAEG---WAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 375 ~~th~~~~~~~~~~---~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
.+|...+...+... ... .+..+++++....+-+.... ..+|+++..|+.++..+.....+.+...+++.++.+++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFS-LLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 47777664433322 223 35778888877776655443 33678999999999888777778899999999999999
Q ss_pred chhHHHHH
Q 004952 451 TVPSLVKA 458 (722)
Q Consensus 451 ~~P~~l~~ 458 (722)
........
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 88766553
No 222
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.57 E-value=1.6e+02 Score=33.61 Aligned_cols=99 Identities=12% Similarity=-0.043 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHh---hh-hcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEec
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WA-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~---~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~ 429 (722)
.|+.++.+.. + . ..-.+|.+.+...+... .. ..++.++|++....+-+.... ..+++++..|+..+..+
T Consensus 23 ~~~~~a~~~~-~----~-~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~-~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 23 HGDTTVTTWG-G----A-EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL-EVLFAVACMGAVFNPLN 95 (576)
T ss_pred CCCceEEEEc-C----C-ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCCEEeecc
Confidence 4566665532 1 1 23456777664433322 22 368899999988877765543 34678899999999887
Q ss_pred CCCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
.......+...++..++..+++.+.....+
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 767778899999999999999887665544
No 223
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.51 E-value=1.5e+02 Score=33.37 Aligned_cols=83 Identities=12% Similarity=0.010 Sum_probs=60.1
Q ss_pred EeCChHHH---HHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|...+. +.+.......++.++|++....+-+..... .+|+++..|+..+..+....+..+...+++.++..+..
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 117 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLE-AYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLF 117 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHH-HHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEE
Confidence 46777663 344444455789999999888776654333 35788889999888876667788889999999998887
Q ss_pred hhHHHHH
Q 004952 452 VPSLVKA 458 (722)
Q Consensus 452 ~P~~l~~ 458 (722)
.+.....
T Consensus 118 ~~~~~~~ 124 (539)
T PRK07008 118 DLTFLPL 124 (539)
T ss_pred cchhHHH
Confidence 7765443
No 224
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=31.26 E-value=1.8e+02 Score=34.26 Aligned_cols=88 Identities=10% Similarity=0.027 Sum_probs=63.6
Q ss_pred ceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcE
Q 004952 372 KAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (722)
Q Consensus 372 KgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~ 448 (722)
+...+|.+.+...+ .......++.++|++..+++-+...- ...++++..|+..+-......++.+...+++.++.+
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWL-ASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 35677887764443 33345578999999988776654433 336788999999887766667788888999999999
Q ss_pred EechhHHHHHHH
Q 004952 449 LGTVPSLVKAWR 460 (722)
Q Consensus 449 l~~~P~~l~~l~ 460 (722)
+++....+..+.
T Consensus 197 lv~~~~~~~~l~ 208 (700)
T PTZ00216 197 IVCNGKNVPNLL 208 (700)
T ss_pred EEECHHHHHHHH
Confidence 988776655543
No 225
>PRK06188 acyl-CoA synthetase; Validated
Probab=31.03 E-value=1.5e+02 Score=33.10 Aligned_cols=80 Identities=14% Similarity=0.035 Sum_probs=59.4
Q ss_pred EEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|.+.+...+ .......++.+++++...++-+..... .+|+++..|+..+..+.......+...+...+++.+.
T Consensus 36 ~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~ 114 (524)
T PRK06188 36 TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLM-AIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLI 114 (524)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEE
Confidence 356777764433 333345688999999888776654433 3678899999999887666777888999999999998
Q ss_pred chhH
Q 004952 451 TVPS 454 (722)
Q Consensus 451 ~~P~ 454 (722)
..+.
T Consensus 115 ~~~~ 118 (524)
T PRK06188 115 VDPA 118 (524)
T ss_pred Eecc
Confidence 8776
No 226
>PRK06060 acyl-CoA synthetase; Validated
Probab=30.53 E-value=1.7e+02 Score=34.48 Aligned_cols=92 Identities=12% Similarity=-0.061 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++. + . .+|.+.+.. .+.......++.+++++....+-+..+-.. +++++..|+..+..+.
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~-~la~~~aG~~~vpi~p 87 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQL-LLACLARGVMAFLANP 87 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH-HHHHHHhCcEEEecCC
Confidence 457777652 2 1 377777644 333444557899999999888777655443 6788999998888776
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l 456 (722)
......+...+++.++.+++......
T Consensus 88 ~~~~~~l~~~l~~~~~~~vi~~~~~~ 113 (705)
T PRK06060 88 ELHRDDHALAARNTEPALVVTSDALR 113 (705)
T ss_pred CCCHHHHHHHHhcCCCcEEEEchHHh
Confidence 66667888888888988887765443
No 227
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.49 E-value=1.8e+02 Score=32.86 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=57.7
Q ss_pred EeCChHHHHHHH---Hhhh-hcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 375 PWTQLSSIRCTA---EGWA-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 375 ~~th~~~~~~~~---~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
.+|...+..... .... ..++.+++++....+-+... +..+|+++..|+..+..+.....+.+...+++.+++.+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 567766644333 2222 35788999998877655433 334678899999999888766778899999999999988
Q ss_pred chhHHH
Q 004952 451 TVPSLV 456 (722)
Q Consensus 451 ~~P~~l 456 (722)
+.+...
T Consensus 127 ~~~~~~ 132 (560)
T PRK08974 127 IVSNFA 132 (560)
T ss_pred Eecccc
Confidence 765443
No 228
>PRK05852 acyl-CoA synthetase; Validated
Probab=29.56 E-value=1.8e+02 Score=32.71 Aligned_cols=90 Identities=14% Similarity=-0.015 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+..|.+.. .+ ...+|...+.. .+.......++.++|++...++-+... +..+|+++..|+..+..+.
T Consensus 29 ~p~~~ai~~~-~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 100 (534)
T PRK05852 29 LPEAPALVVT-AD------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEF-VVALLAASRADLVVVPLDP 100 (534)
T ss_pred CCCCcEEEec-CC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH-HHHHHHHHHcCcEEeecCC
Confidence 4566665532 11 12467666543 333344557899999998887666543 3346788999999998887
Q ss_pred CCChhhHHHHHHHhCCcEEec
Q 004952 431 SPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~ 451 (722)
......+...|+..+++.++.
T Consensus 101 ~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 101 ALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CCCcHHHHHHHHhCCCCEEEE
Confidence 777788999999999998874
No 229
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=29.01 E-value=5.7e+02 Score=26.73 Aligned_cols=76 Identities=11% Similarity=-0.032 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CCCEEEEEcCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEec
Q 004952 212 YKELREQVMLVANALDTMFS-KGDAIAIDMPMTVRA-VIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (722)
Q Consensus 212 Y~eL~~~~~~lA~~L~~~v~-~gd~V~l~~~~s~~~-vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 287 (722)
|....+...++...|.+.++ +.+.+.+...++.+. ..++.+.++.|-..+..++.+........++..+++++...
T Consensus 27 ~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 27 SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 44444445555555555533 344455555554444 44555666778776666666555445566777787777654
No 230
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=28.45 E-value=2.6e+02 Score=35.00 Aligned_cols=99 Identities=8% Similarity=-0.045 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCCCCCCCCceEEeCChHHHHHHHHhhhhc--CCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 353 ~~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
..|+++|.+.. +| -.+|.+.+...+......+ .+.++|++....+-+...-. .+++++..|+..+..+.
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~-~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGAL-ANLALLLAGKVPVNLNY 697 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHHH-HHHHHHHcCCEEEEeCC
Confidence 45788887632 22 1467777644433222221 36889999888877765443 36789999999888876
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (722)
....+++...+++.+++.+...+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 667789999999999999998887776664
No 231
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=28.08 E-value=1.5e+02 Score=32.83 Aligned_cols=79 Identities=11% Similarity=-0.052 Sum_probs=58.0
Q ss_pred EeCChHHHHHHHH---hhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+.. .....++.+++++....+-+.... ..+|+++..|+..+..+.....+.+...+++.++..++.
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML-VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH-HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 5777776444333 334457889999888777765554 337789999999888876666778889999999998887
Q ss_pred hhH
Q 004952 452 VPS 454 (722)
Q Consensus 452 ~P~ 454 (722)
...
T Consensus 104 ~~~ 106 (502)
T TIGR01734 104 TAE 106 (502)
T ss_pred ccc
Confidence 654
No 232
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.00 E-value=5.6e+02 Score=29.52 Aligned_cols=101 Identities=11% Similarity=0.030 Sum_probs=62.4
Q ss_pred CCCCeEEEEcC--CCCCCCCceEEeCChHHHHHHHHh---hhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEe
Q 004952 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (722)
Q Consensus 354 ~~~~~a~il~T--SGSTG~PKgV~~th~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~ 428 (722)
.++.+|++... ++..|. ...+|.+.+...+... .... +.++|++...++-+..+- ..+|+++..|+..+..
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYL-IAFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHH-HHHHHHHHcCCEEEee
Confidence 34666655422 222232 3457777764433322 2233 689999988877665443 3367888999988765
Q ss_pred -cCCCC--hhhHHHHHHHhCCcEEechhHHHHH
Q 004952 429 -QGSPL--ERSFGKFVQDAGVTVLGTVPSLVKA 458 (722)
Q Consensus 429 -~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (722)
+.... ...+...+++.++.+++........
T Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 142 (631)
T PRK07769 110 FDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEG 142 (631)
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEEChHHHHH
Confidence 32221 3568888999999999887765443
No 233
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=26.19 E-value=3e+02 Score=30.36 Aligned_cols=46 Identities=9% Similarity=0.011 Sum_probs=32.2
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHH-HHHhCcEEE--------------ecCCCCCHHHHHHHHHhcC
Q 004952 230 FSKGDAIAIDMPMTVRAVIIYLA-IILAGYVVV--------------SIADSFAAREIATRLRVSK 280 (722)
Q Consensus 230 v~~gd~V~l~~~~s~~~vv~~lA-~~~aGa~~v--------------pl~p~~~~~~l~~~l~~~~ 280 (722)
+++||.| .+..++...-+ +...|++++ |...+...+.++..|+..+
T Consensus 114 v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 114 IKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred CCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 8999965 33344555555 788899887 3344678889999988654
No 234
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=26.16 E-value=1.6e+02 Score=27.77 Aligned_cols=43 Identities=9% Similarity=0.014 Sum_probs=32.5
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHH
Q 004952 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLA 252 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA 252 (722)
-+||.|+.+.+.++|..+.+. -.+.+ +.|...++-..++..||
T Consensus 16 ~~s~~~i~~~i~~la~~i~~~~~~~~~-viV~i~~gg~~~A~~La 59 (181)
T PRK09162 16 LVSAAEVEAAIDRMADEITADLADENP-LVLCVMGGGLVFTGQLL 59 (181)
T ss_pred eecHHHHHHHHHHHHHHHHHHcCCCCe-EEEEECCCcHHHHHHHH
Confidence 799999999999999999887 33334 55666666666666555
No 235
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.03 E-value=2.4e+02 Score=31.74 Aligned_cols=83 Identities=14% Similarity=-0.024 Sum_probs=59.6
Q ss_pred EeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|...+...+. ......++.+++++....+-+... +..+|+++..|++.+..+.......+...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 577777644333 233446889999998777655443 3447788999999998876667788889999999998888
Q ss_pred hhHHHHH
Q 004952 452 VPSLVKA 458 (722)
Q Consensus 452 ~P~~l~~ 458 (722)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7665443
No 236
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=25.91 E-value=2.1e+02 Score=32.15 Aligned_cols=78 Identities=15% Similarity=0.034 Sum_probs=56.7
Q ss_pred EeCChHHHH---HHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|...+.. .+.......++.+++++....+-+...-. .+++++..|+.++..+.......+...++..++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPI-NFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHH-HHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 477766533 33333455689999999888876654433 36688889999888776666778999999999998876
Q ss_pred hh
Q 004952 452 VP 453 (722)
Q Consensus 452 ~P 453 (722)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 43
No 237
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=25.86 E-value=1.6e+02 Score=31.42 Aligned_cols=63 Identities=17% Similarity=0.187 Sum_probs=42.8
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHHhcCceEEEec
Q 004952 221 LVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (722)
Q Consensus 221 ~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (722)
.|-..|... +++||.|.+-.- -++...-|++.+|+.+|.+|-+ ..++.++..+..-. ++|+..
T Consensus 52 Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 345556678 999999988643 3455678899999999988765 66888888887655 444443
No 238
>PRK12582 acyl-CoA synthetase; Provisional
Probab=25.62 E-value=2.1e+02 Score=33.04 Aligned_cols=95 Identities=11% Similarity=-0.022 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.++++.... .+| ..-.+|.+.+...+ .......++.++|++...++-+.... ..+|+++..|+..+..+.
T Consensus 62 ~pd~~a~~~~~~-~~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 62 APDRPWLAQREP-GHG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHA-LMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred CCCchheecccC-CCC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCeEeeccC
Confidence 346666543221 122 13467877764443 33334568999999988887654433 346788999999888764
Q ss_pred CCC-----hhhHHHHHHHhCCcEEech
Q 004952 431 SPL-----ERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 431 ~~~-----~~~l~~~i~~~~vt~l~~~ 452 (722)
... ...+...+++.++.+++..
T Consensus 138 ~~~~~~~~~~~l~~~l~~~~~~~vi~~ 164 (624)
T PRK12582 138 AYSLMSHDHAKLKHLFDLVKPRVVFAQ 164 (624)
T ss_pred ccccccCCHHHHHHHHHhcCCcEEEec
Confidence 332 3678888888888887764
No 239
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=25.56 E-value=2.2e+02 Score=31.54 Aligned_cols=78 Identities=8% Similarity=-0.085 Sum_probs=57.1
Q ss_pred EeCChHHHHHHH---HhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+. ......++.+++++....+-+... +..+|+++..|+..+..+.......+...++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~-~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEM-LATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 478877754433 333456788899998887766553 3447788999998888776666778888999998888887
Q ss_pred hh
Q 004952 452 VP 453 (722)
Q Consensus 452 ~P 453 (722)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 240
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=25.17 E-value=5.3e+02 Score=23.57 Aligned_cols=112 Identities=10% Similarity=-0.041 Sum_probs=66.7
Q ss_pred eEEeCChHHHHHHHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhH---HHHHHHhCCcEE
Q 004952 373 AIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSF---GKFVQDAGVTVL 449 (722)
Q Consensus 373 gV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l---~~~i~~~~vt~l 449 (722)
-.++.+.++...+... +...+..+.+++-......+.++.-|...++-+.+.+++|++.+ .+++++++-+.+
T Consensus 21 V~VvENp~Vf~~~~~~-----~~~~~~pLVCt~G~p~~A~~~LL~~L~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~W 95 (152)
T PF09664_consen 21 VYVVENPAVFSALADE-----LGASCPPLVCTSGQPSAAARRLLDRLAAAGARLYYSGDFDPEGLRIANRLIQRYGARPW 95 (152)
T ss_pred EEEEecHHHHHHHHHh-----cCCCCCeEEEcCCcHHHHHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHHHHHhCCccc
Confidence 5567788877766543 22344444444444444455566666665666667778888743 367788998889
Q ss_pred echhHHHHHHHhcCCCCCCCccceeEEEeecCCCCcchHHHHHhh
Q 004952 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (722)
Q Consensus 450 ~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~ 494 (722)
.+.+.-+.............+. +..+ .+..+++...+++.
T Consensus 96 rm~~~dY~~~~~~~~~~~~~l~-l~~v----~p~~~~L~~~m~~~ 135 (152)
T PF09664_consen 96 RMDAEDYLAALSAEPLSGRRLK-LPNV----APWLPELAEAMRER 135 (152)
T ss_pred cCCHHHHHHhccccCCCCCcCC-cccC----ChhcHHHHHHHHHh
Confidence 9999988666554433333333 3222 34445555555543
No 241
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=24.86 E-value=2.5e+02 Score=30.73 Aligned_cols=79 Identities=6% Similarity=-0.095 Sum_probs=58.4
Q ss_pred EEeCChHHHHHHHHh---hhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEe
Q 004952 374 IPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (722)
Q Consensus 374 V~~th~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (722)
..+|++.+...+... ....++.+++++....+-+...- ..+|+++..|+..+..+.....+.+...+++.++..+.
T Consensus 27 ~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i 105 (458)
T PRK09029 27 EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETL-LAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFAL 105 (458)
T ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEE
Confidence 357887775544433 33467899999988777665443 34678899999999988777777888899999998887
Q ss_pred chh
Q 004952 451 TVP 453 (722)
Q Consensus 451 ~~P 453 (722)
...
T Consensus 106 ~~~ 108 (458)
T PRK09029 106 VLE 108 (458)
T ss_pred EcC
Confidence 654
No 242
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.79 E-value=2e+02 Score=32.55 Aligned_cols=81 Identities=12% Similarity=0.027 Sum_probs=58.3
Q ss_pred EeCChHHHHHHHH---hhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+.. .....++..+|++....+-+... +..+|+++..|+..+..+.......+...++..+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 4677766444333 33446788999998877666544 3447788999988888776667788999999999999888
Q ss_pred hhHHH
Q 004952 452 VPSLV 456 (722)
Q Consensus 452 ~P~~l 456 (722)
.+...
T Consensus 128 ~~~~~ 132 (563)
T PRK06710 128 LDLVF 132 (563)
T ss_pred eccch
Confidence 76443
No 243
>PLN03051 acyl-activating enzyme; Provisional
Probab=24.38 E-value=4.9e+02 Score=28.89 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=63.6
Q ss_pred CCCceEEEEecCCCCCCcc--ceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCcEEEecC
Q 004952 189 EDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIA 264 (722)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~-~vv~~lA~~~aGa~~vpl~ 264 (722)
.|+.+|++.... |.++.. ..+|++.+...+.. ..... +.++|++...+|-+.. .+..+++++..|+..+..+
T Consensus 117 ~~~d~a~i~yTS-GTTG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 117 PVESVTNILFSS-GTTGEPKAIPWTHLSPLRCASD---GWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred CccceEEEEeCC-CCCCCCceEEEccchHHHHHHH---HHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 356677765432 233332 35677765543322 22334 7889988776664432 1245778899999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccch
Q 004952 265 DSFAAREIATRLRVSKAKGIFTQDFI 290 (722)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~ 290 (722)
.....+++...+++.++.++......
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~ 218 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSI 218 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHH
Confidence 55667889999999999999887643
No 244
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=23.38 E-value=3.5e+02 Score=31.17 Aligned_cols=50 Identities=10% Similarity=-0.021 Sum_probs=34.9
Q ss_pred CCCCEEEEecCccccchh--HHHHHHhhcCCEEEEecCCCCh---hhHHHHHHHh
Q 004952 395 KVGDVYCWPTNLGWVMGP--VILFSSFLNGATLALYQGSPLE---RSFGKFVQDA 444 (722)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~--~~~~~~L~~G~~lv~~~~~~~~---~~l~~~i~~~ 444 (722)
.|-.+++..+|++|-..+ +.+..+|++|.++|+-+....+ ..+.+++.+.
T Consensus 248 eP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eA 302 (604)
T PLN02419 248 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEA 302 (604)
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHh
Confidence 356788889999987775 4466799999999997754433 2344555554
No 245
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=23.30 E-value=2.1e+02 Score=32.05 Aligned_cols=79 Identities=14% Similarity=0.056 Sum_probs=56.6
Q ss_pred EeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEec
Q 004952 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (722)
Q Consensus 375 ~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (722)
.+|.+.+...+ .......++.+++++....+-+...... +|+++..|+..+..........+...+++.++..+..
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~-~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~ 126 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIV-FFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYII 126 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHH-HHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEE
Confidence 57877764443 3334456899999998887666554433 6688889998876665556678888999999888877
Q ss_pred hhH
Q 004952 452 VPS 454 (722)
Q Consensus 452 ~P~ 454 (722)
.+.
T Consensus 127 ~~~ 129 (527)
T TIGR02275 127 DRA 129 (527)
T ss_pred cCc
Confidence 543
No 246
>PRK09192 acyl-CoA synthetase; Validated
Probab=22.62 E-value=3.6e+02 Score=30.64 Aligned_cols=87 Identities=11% Similarity=-0.057 Sum_probs=59.8
Q ss_pred eEEeCChHHHHH---HHHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCC-------hhhHHHHHH
Q 004952 373 AIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFGKFVQ 442 (722)
Q Consensus 373 gV~~th~~~~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~-------~~~l~~~i~ 442 (722)
.-.+|...+... +.......++++++++..+.+-+-... ..+|+++..|+..+..+.... .+.+...++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~-~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFV-EAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHH-HHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 356777776433 333334568999999988777654433 336788999999988853221 467888999
Q ss_pred HhCCcEEechhHHHHHHH
Q 004952 443 DAGVTVLGTVPSLVKAWR 460 (722)
Q Consensus 443 ~~~vt~l~~~P~~l~~l~ 460 (722)
+.++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999988776554433
No 247
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=22.45 E-value=4e+02 Score=27.37 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=45.0
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccc
Q 004952 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (722)
Q Consensus 222 lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (722)
+...+.+. +.+|+.| +....+-.-...-+++.+.|..+..+-|...+.....+++..++.+++++..
T Consensus 45 l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 45 IWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 44444444 6778877 4454555555556677778987776666554445577889999999999763
No 248
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.31 E-value=4e+02 Score=21.24 Aligned_cols=67 Identities=24% Similarity=0.234 Sum_probs=51.5
Q ss_pred eecHHHHHHHHHHHHH---HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEE
Q 004952 209 LMTYKELREQVMLVAN---ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGI 284 (722)
Q Consensus 209 ~lTY~eL~~~~~~lA~---~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~i 284 (722)
..||.||++.-..++. .|... ++.+|-|+|+-=++.. ..-.+.++..-+.++++.-+++.++++=
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~in 77 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEIN 77 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchhc
Confidence 7899999998776664 46666 8899999998755542 2234678888899999999999999764
Q ss_pred Ee
Q 004952 285 FT 286 (722)
Q Consensus 285 l~ 286 (722)
-.
T Consensus 78 ~d 79 (88)
T COG4009 78 RD 79 (88)
T ss_pred cc
Confidence 33
No 249
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=22.15 E-value=3.7 Score=49.11 Aligned_cols=136 Identities=13% Similarity=-0.018 Sum_probs=82.6
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEeccc
Q 004952 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (722)
Q Consensus 211 TY~eL~~~~~~lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (722)
+ .|+.++.+++|..+... ..-.+++.++---+-++...+....+ +..+.+++-.-+.+++....+++.+-+..++..
T Consensus 130 ~-~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs 207 (1032)
T KOG1178|consen 130 N-SELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMVLHNEDTREIRVGGNDSTALLSFTSGS 207 (1032)
T ss_pred c-cccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhc-cchhhhhhccCCCcceeeecccccceEeecccc
Confidence 5 88999999999999887 66666666655444455555555555 666677777777777777888887777777653
Q ss_pred hhcCCccccchHHHhhcCCCcEEEEcCCCCCCCCCCCCCCCCHHHHhcccCCCCCCCCCCCccCCCCCeEEEEcCCCCCC
Q 004952 290 ILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369 (722)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG 369 (722)
.- ++.-. ...-.++.....- ....++.......+..+.+|+.+||+
T Consensus 208 ~G-----~pk~v------------------------~~~~~sl~~~fdw-----~~~~f~~t~s~~~~~~~~~~~~d~i~ 253 (1032)
T KOG1178|consen 208 TG-----VPKGV------------------------AGTHFSLANAFDW-----MFTTFPPTGSDRFTFKTSVYFDDTIQ 253 (1032)
T ss_pred cc-----ccccc------------------------chhHHHHHhhhhh-----ccccCCcCccchhhhhheeecccchH
Confidence 20 01000 0000000000000 01112333333335678999999999
Q ss_pred CCceEEeCChHHH
Q 004952 370 EPKAIPWTQLSSI 382 (722)
Q Consensus 370 ~PKgV~~th~~~~ 382 (722)
++++..+.+.+.+
T Consensus 254 ~~~~~~L~~~~~l 266 (1032)
T KOG1178|consen 254 KFIGALLFNGNNL 266 (1032)
T ss_pred HHHhhHhhcCcee
Confidence 9999999998843
No 250
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=21.98 E-value=2.4e+02 Score=30.26 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=39.3
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHHhcCceEEEec
Q 004952 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (722)
Q Consensus 222 lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (722)
+...++.. +++||.|.+-.+. +.....++...|+.++.++.+ ...+.++..+.. +.++|+..
T Consensus 59 L~~~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 33345556 8899998875554 334455667889887776643 355667776653 56666643
No 251
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=21.69 E-value=3.7e+02 Score=29.62 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=44.8
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHH
Q 004952 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIY 250 (722)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~v~~gd~V~l~~~~s~~~vv~~ 250 (722)
..-+..|+...+.. ..+|+++.+.++.++..+.+...++....|++++...=+..+
T Consensus 370 ~~~~~~Alal~g~~-------~~~f~~iq~lA~~i~~~~~~~~~~~~Plivv~e~D~aKvLGq 425 (473)
T PF06277_consen 370 GEDQPVALALPGKP-------NPSFAEIQELAEAIAEGMAELINPDQPLIVVVEQDMAKVLGQ 425 (473)
T ss_pred CCCCcEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEECchHHHHHHH
Confidence 44577788777663 899999999999999999977888888888888876555443
No 252
>PRK07868 acyl-CoA synthetase; Validated
Probab=21.37 E-value=5.1e+02 Score=32.03 Aligned_cols=93 Identities=18% Similarity=0.071 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCCCCCCCCceEEeCChHHHHHH---HHhhhhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecC
Q 004952 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (722)
Q Consensus 354 ~~~~~a~il~TSGSTG~PKgV~~th~~~~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~ 430 (722)
.|+.+|++ +. +-.+|.+.+...+ .......++.+++++...++-+...- ..+++++..|+..+..+.
T Consensus 460 ~pd~~Al~-~~--------~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v-~a~lA~~~aGav~vpl~p 529 (994)
T PRK07868 460 APKGEFLL-FD--------GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSAL-VAIAALSRLGAVAVLMPP 529 (994)
T ss_pred CCCCeEEE-eC--------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHhcCCEEEEeCC
Confidence 46777765 32 1257887764433 33345578999999987776654433 347789999999998874
Q ss_pred CCChhhHHHHHHHhCCcEEechhHHHHHH
Q 004952 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (722)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (722)
. ..+...++..++++++..+..+..+
T Consensus 530 ~---~~l~~il~~s~~~~li~~~~~~~~~ 555 (994)
T PRK07868 530 D---TDLAAAVRLGGVTEIITDPTNLEAA 555 (994)
T ss_pred c---hhHHHHHhccCCeEEEEChHHHHHH
Confidence 3 4677788888899888877665544
No 253
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=21.34 E-value=3.3e+02 Score=20.64 Aligned_cols=49 Identities=10% Similarity=0.141 Sum_probs=34.6
Q ss_pred echHHHHHHHhccCCCcceeEEEeecCCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 004952 622 TSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ 682 (722)
Q Consensus 622 i~~~eIE~~l~~~~p~V~~~~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~ 682 (722)
-...++...| +.+|+|.+|..+.-. .-+++.+..+ +.+++.+.+.+++.
T Consensus 10 ~~~~~~~~~l-~~~p~V~~~~~vtG~------~d~~~~v~~~-----d~~~l~~~i~~~l~ 58 (74)
T PF01037_consen 10 DAYDEFAEAL-AEIPEVVECYSVTGE------YDLILKVRAR-----DMEELEEFIREKLR 58 (74)
T ss_dssp THHHHHHHHH-HTSTTEEEEEEESSS------SSEEEEEEES-----SHHHHHHHHHHTHH
T ss_pred chHHHHHHHH-HcCCCEEEEEEEeCC------CCEEEEEEEC-----CHHHHHHHHHHHhh
Confidence 4467888888 599999999887532 3355555543 46888888887664
No 254
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=21.29 E-value=4e+02 Score=30.07 Aligned_cols=94 Identities=16% Similarity=-0.019 Sum_probs=65.2
Q ss_pred EEEEcCCCCCCCCceEEeCChHHHHH---HHHhh-hhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCCh
Q 004952 359 VNILFSSGTTGEPKAIPWTQLSSIRC---TAEGW-AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE 434 (722)
Q Consensus 359 a~il~TSGSTG~PKgV~~th~~~~~~---~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~ 434 (722)
..++|-+-.++. -.+|.+.+... ++... ...+. +|||++.+.|....+... ++++.-.|+....+-..+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a-~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIA-LLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHH-HHHHHHcCCEEeecccCCCH
Confidence 445665544444 56676665333 33333 34667 999999999998766544 66888889887777666778
Q ss_pred hhHHHHHHHhCCcEEechhHHHH
Q 004952 435 RSFGKFVQDAGVTVLGTVPSLVK 457 (722)
Q Consensus 435 ~~l~~~i~~~~vt~l~~~P~~l~ 457 (722)
..+..-|...++.++++....++
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred HHHHHHHHccCCCEEEEeccccc
Confidence 88989999999888887655544
No 255
>PLN02565 cysteine synthase
Probab=21.03 E-value=5.9e+02 Score=26.58 Aligned_cols=59 Identities=14% Similarity=0.132 Sum_probs=45.6
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEecc
Q 004952 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (722)
Q Consensus 230 v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (722)
+.+|....+....+-.-+..-+++...|..++.+-|...+.....+++..++++++++.
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 57886655555666666666677888998888777777777778899999999999875
No 256
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=20.32 E-value=3.9e+02 Score=28.53 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=49.5
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCceEEEecc
Q 004952 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (722)
Q Consensus 222 lA~~L~~~-v~~gd~V~l~~~~s~~~vv~~lA~~~aGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (722)
+...+.+- +++|....|....+-.-+..-++|...|.-+..+-|...+.....+++..|+++++++.
T Consensus 98 l~~a~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 98 IEDAEKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHHHHHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 44444444 77885545556666677777778888998877777776666778899999999999874
No 257
>PRK08308 acyl-CoA synthetase; Validated
Probab=20.26 E-value=3.4e+02 Score=29.16 Aligned_cols=78 Identities=9% Similarity=-0.031 Sum_probs=53.6
Q ss_pred EeCChHHHHHHHHhh--hhcCCCCCCEEEEecCccccchhHHHHHHhhcCCEEEEecCCCChhhHHHHHHHhCCcEEech
Q 004952 375 PWTQLSSIRCTAEGW--AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (722)
Q Consensus 375 ~~th~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~L~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~ 452 (722)
.+|.+.+........ ...++.+++++....+-+..+- ..+|+.+..|+..+..+.....+.+...+++.++..+...
T Consensus 8 ~~ty~el~~~~~~~a~~l~~~~~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~ 86 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEMEQFQEAAGNRFAVCLKDPFDII-TLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYG 86 (414)
T ss_pred eecHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEec
Confidence 456555544332221 2356788999987776655433 3367888899999988876666788888999999888765
Q ss_pred h
Q 004952 453 P 453 (722)
Q Consensus 453 P 453 (722)
.
T Consensus 87 ~ 87 (414)
T PRK08308 87 E 87 (414)
T ss_pred C
Confidence 4
Done!