STRING 9.05 
  AT1G06840 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT1G06840
leucine-rich repeat transmembrane protein kinase, putative; leucine-rich repeat transmembrane protein kinase, putative; FUNCTIONS IN- protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN- transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN- plasma membrane, membrane; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 9 growth stages; CONTAINS InterPro DOMAIN/s- Protein kinase, ATP binding site (InterPro-IPR017441), Serine/threonine pro [...] (939 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G06830
glutaredoxin family protein; glutaredoxin family protein; FUNCTIONS IN- electron carrier activi [...] (99 aa)
       0.690
AT1G06810
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (202 aa)
       0.690
AT1G06800
lipase class 3 family protein; lipase class 3 family protein; FUNCTIONS IN- triacylglycerol lip [...] (515 aa)
       0.647
PIN6
PIN6 (PIN-FORMED 6); auxin-hydrogen symporter/ transporter; Rate-limiting factor in saturable e [...] (570 aa)
       0.409
AT1G51840
protein kinase-related; protein kinase-related; FUNCTIONS IN- molecular_function unknown; INVOL [...] (180 aa)
       0.408
At5g52570
BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2); carotene beta-ring hydroxylase; Converts β-car [...] (303 aa)
       0.406
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: medium (51%)
Permalink