Query 004953
Match_columns 722
No_of_seqs 735 out of 4834
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 15:38:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004953.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004953hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4.3E-59 9.4E-64 566.8 48.5 304 31-342 25-353 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.4E-37 2.9E-42 378.6 29.3 593 80-712 138-775 (968)
3 KOG4194 Membrane glycoprotein 100.0 8E-31 1.7E-35 273.7 7.8 319 60-385 47-405 (873)
4 KOG4194 Membrane glycoprotein 100.0 1E-30 2.2E-35 273.0 3.5 301 81-385 124-429 (873)
5 KOG0444 Cytoskeletal regulator 99.9 7.4E-29 1.6E-33 260.2 -3.5 294 80-384 76-374 (1255)
6 KOG0444 Cytoskeletal regulator 99.9 1.4E-27 3E-32 250.7 -7.0 293 82-384 55-351 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 1.9E-26 4.1E-31 231.7 -5.4 293 81-385 136-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 2.4E-25 5.3E-30 223.7 -9.4 264 83-384 46-309 (565)
9 PRK15387 E3 ubiquitin-protein 99.9 1.6E-21 3.6E-26 221.9 18.7 259 84-389 203-462 (788)
10 KOG4237 Extracellular matrix p 99.9 4.8E-24 1E-28 214.4 -3.3 313 59-389 37-363 (498)
11 PLN03210 Resistant to P. syrin 99.8 5.9E-19 1.3E-23 216.0 26.1 278 84-381 591-878 (1153)
12 PRK15370 E3 ubiquitin-protein 99.8 6E-20 1.3E-24 210.6 16.0 317 28-386 56-429 (754)
13 KOG1187 Serine/threonine prote 99.8 3.4E-20 7.3E-25 197.5 13.0 111 610-720 61-185 (361)
14 PRK15370 E3 ubiquitin-protein 99.8 1.5E-19 3.3E-24 207.3 15.5 251 83-364 179-429 (754)
15 KOG0618 Serine/threonine phosp 99.8 4E-21 8.7E-26 211.9 1.3 277 83-385 46-323 (1081)
16 PRK15387 E3 ubiquitin-protein 99.8 4.7E-19 1E-23 201.9 17.9 239 82-365 222-460 (788)
17 KOG0618 Serine/threonine phosp 99.8 1.1E-21 2.4E-26 216.3 -4.4 280 84-384 158-488 (1081)
18 PLN03210 Resistant to P. syrin 99.8 3E-18 6.5E-23 209.8 23.6 287 81-385 557-859 (1153)
19 cd00116 LRR_RI Leucine-rich re 99.7 7.9E-20 1.7E-24 194.1 -3.4 202 86-287 2-234 (319)
20 KOG4237 Extracellular matrix p 99.7 2.7E-19 5.9E-24 180.3 -5.9 283 85-388 49-338 (498)
21 cd00116 LRR_RI Leucine-rich re 99.7 7.9E-19 1.7E-23 186.5 -3.9 274 110-384 2-319 (319)
22 KOG0196 Tyrosine kinase, EPH ( 99.7 3.9E-17 8.6E-22 177.3 8.6 102 612-713 608-723 (996)
23 KOG0617 Ras suppressor protein 99.7 9.3E-19 2E-23 157.2 -4.3 163 102-270 29-192 (264)
24 KOG0617 Ras suppressor protein 99.6 2.5E-18 5.4E-23 154.5 -5.1 162 82-250 33-195 (264)
25 KOG1026 Nerve growth factor re 99.6 3.5E-16 7.6E-21 173.4 7.6 94 622-715 484-584 (774)
26 PLN03150 hypothetical protein; 99.6 5.7E-15 1.2E-19 169.2 14.6 159 28-190 365-527 (623)
27 KOG0595 Serine/threonine-prote 99.6 5.2E-15 1.1E-19 150.9 10.0 91 624-714 10-103 (429)
28 KOG1094 Discoidin domain recep 99.5 2.1E-14 4.5E-19 151.7 10.6 91 624-714 538-629 (807)
29 KOG4278 Protein tyrosine kinas 99.5 1.4E-14 2.9E-19 153.5 4.9 97 617-714 260-357 (1157)
30 KOG0197 Tyrosine kinases [Sign 99.5 3.7E-14 8E-19 150.1 5.2 90 623-713 205-294 (468)
31 KOG2052 Activin A type IB rece 99.4 1.8E-13 3.8E-18 140.9 8.9 91 624-718 211-307 (513)
32 KOG0192 Tyrosine kinase specif 99.4 3E-13 6.4E-18 143.4 9.8 85 629-713 46-133 (362)
33 KOG0194 Protein tyrosine kinas 99.4 1.8E-13 3.9E-18 147.2 8.1 98 617-714 150-255 (474)
34 KOG1025 Epidermal growth facto 99.4 8.3E-14 1.8E-18 152.3 5.4 92 626-718 698-795 (1177)
35 KOG1095 Protein tyrosine kinas 99.4 2.6E-13 5.6E-18 156.2 6.9 91 624-714 692-789 (1025)
36 KOG3653 Transforming growth fa 99.4 2.8E-12 6E-17 133.2 11.4 86 626-715 212-303 (534)
37 KOG0615 Serine/threonine prote 99.3 3E-12 6.6E-17 130.8 8.7 88 625-712 173-268 (475)
38 KOG0532 Leucine-rich repeat (L 99.3 1E-13 2.2E-18 146.4 -3.6 198 129-361 74-271 (722)
39 KOG0532 Leucine-rich repeat (L 99.3 8.8E-14 1.9E-18 146.9 -5.2 195 81-285 74-271 (722)
40 KOG0600 Cdc2-related protein k 99.2 1.1E-11 2.5E-16 129.7 7.2 96 625-720 118-233 (560)
41 COG4886 Leucine-rich repeat (L 99.2 1.2E-11 2.6E-16 135.4 7.0 200 110-341 97-297 (394)
42 COG4886 Leucine-rich repeat (L 99.2 1.3E-11 2.8E-16 135.1 7.0 199 86-293 97-296 (394)
43 KOG0575 Polo-like serine/threo 99.2 4.4E-11 9.5E-16 128.5 9.9 89 624-712 18-110 (592)
44 KOG0659 Cdk activating kinase 99.2 1.7E-11 3.7E-16 118.5 6.0 97 625-721 3-117 (318)
45 cd05105 PTKc_PDGFR_alpha Catal 99.2 6.4E-11 1.4E-15 129.4 9.4 95 621-715 34-136 (400)
46 KOG4257 Focal adhesion tyrosin 99.2 3.4E-11 7.3E-16 128.5 6.5 92 622-714 387-484 (974)
47 cd05104 PTKc_Kit Catalytic dom 99.2 5.6E-11 1.2E-15 129.1 8.1 94 622-715 33-134 (375)
48 PF07714 Pkinase_Tyr: Protein 99.1 7.5E-11 1.6E-15 121.3 8.4 86 629-714 4-95 (259)
49 KOG0593 Predicted protein kina 99.1 2.7E-11 5.9E-16 119.1 4.7 96 625-720 3-116 (396)
50 cd05064 PTKc_EphR_A10 Catalyti 99.1 1.3E-10 2.9E-15 119.8 9.7 90 624-713 5-99 (266)
51 cd06624 STKc_ASK Catalytic dom 99.1 1.6E-10 3.5E-15 119.3 10.3 96 618-713 2-98 (268)
52 KOG0580 Serine/threonine prote 99.1 2.4E-11 5.3E-16 115.9 3.6 90 623-712 21-114 (281)
53 KOG3207 Beta-tubulin folding c 99.1 8.9E-12 1.9E-16 128.3 0.4 207 104-311 119-340 (505)
54 PHA02988 hypothetical protein; 99.1 2.6E-10 5.6E-15 118.9 11.4 97 611-713 12-115 (283)
55 KOG0591 NIMA (never in mitosis 99.1 7.1E-12 1.5E-16 122.0 -1.2 90 626-715 21-115 (375)
56 cd05107 PTKc_PDGFR_beta Cataly 99.1 1.5E-10 3.3E-15 126.4 8.5 95 620-714 33-135 (401)
57 cd05096 PTKc_DDR1 Catalytic do 99.1 3.2E-10 6.9E-15 119.5 10.7 90 624-713 5-112 (304)
58 KOG0581 Mitogen-activated prot 99.1 3E-10 6.4E-15 115.5 9.6 86 628-713 83-171 (364)
59 KOG0597 Serine-threonine prote 99.1 7.1E-11 1.5E-15 125.0 5.1 89 624-713 2-93 (808)
60 cd05102 PTKc_VEGFR3 Catalytic 99.1 1.5E-10 3.3E-15 123.9 7.6 93 622-714 5-106 (338)
61 KOG0605 NDR and related serine 99.1 2.4E-10 5.3E-15 120.9 8.5 92 622-713 139-234 (550)
62 KOG0598 Ribosomal protein S6 k 99.1 2.1E-10 4.6E-15 116.5 7.6 91 623-713 24-118 (357)
63 cd05626 STKc_LATS2 Catalytic d 99.1 3.4E-10 7.3E-15 123.4 9.9 89 625-713 2-94 (381)
64 cd05114 PTKc_Tec_Rlk Catalytic 99.1 4E-10 8.6E-15 115.5 9.5 88 625-713 5-92 (256)
65 cd06650 PKc_MEK1 Catalytic dom 99.1 6.5E-10 1.4E-14 118.8 11.2 90 624-713 5-96 (333)
66 PLN03150 hypothetical protein; 99.1 2.8E-10 6.2E-15 130.6 8.9 108 132-239 420-528 (623)
67 cd05599 STKc_NDR_like Catalyti 99.1 4E-10 8.7E-15 122.0 9.5 89 625-713 2-94 (364)
68 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.1 3.4E-10 7.4E-15 117.4 8.5 83 631-713 2-109 (274)
69 KOG1259 Nischarin, modulator o 99.1 3.5E-11 7.5E-16 118.0 0.6 130 201-335 283-413 (490)
70 KOG0199 ACK and related non-re 99.0 1.7E-10 3.7E-15 124.8 5.8 85 628-713 114-203 (1039)
71 cd05106 PTKc_CSF-1R Catalytic 99.0 3.2E-10 7E-15 123.1 8.0 94 622-715 36-137 (374)
72 cd05148 PTKc_Srm_Brk Catalytic 99.0 2.5E-10 5.4E-15 117.2 6.8 92 622-713 4-95 (261)
73 cd05629 STKc_NDR_like_fungal C 99.0 5.7E-10 1.2E-14 121.4 10.0 89 625-713 2-94 (377)
74 cd06649 PKc_MEK2 Catalytic dom 99.0 8.6E-10 1.9E-14 117.8 11.1 90 624-713 5-96 (331)
75 cd05600 STKc_Sid2p_Dbf2p Catal 99.0 6.9E-10 1.5E-14 118.6 10.1 89 625-713 2-94 (333)
76 PTZ00263 protein kinase A cata 99.0 6.7E-10 1.4E-14 118.5 9.9 90 624-713 18-111 (329)
77 cd05625 STKc_LATS1 Catalytic d 99.0 6.3E-10 1.4E-14 121.3 9.8 89 625-713 2-94 (382)
78 cd06615 PKc_MEK Catalytic doma 99.0 1.1E-09 2.4E-14 115.7 11.0 89 625-713 2-92 (308)
79 PTZ00426 cAMP-dependent protei 99.0 7.1E-10 1.5E-14 118.8 9.6 90 624-713 30-124 (340)
80 cd05612 STKc_PRKX_like Catalyt 99.0 4.3E-10 9.3E-15 117.8 7.8 89 625-713 2-94 (291)
81 PLN00034 mitogen-activated pro 99.0 7.2E-10 1.6E-14 119.5 9.4 83 626-708 76-160 (353)
82 KOG1259 Nischarin, modulator o 99.0 7E-11 1.5E-15 115.8 1.4 132 247-387 280-414 (490)
83 cd05061 PTKc_InsR Catalytic do 99.0 7.4E-10 1.6E-14 115.7 9.2 92 622-713 4-102 (288)
84 KOG0193 Serine/threonine prote 99.0 2.8E-10 6.1E-15 121.9 5.9 92 617-711 385-478 (678)
85 cd06646 STKc_MAP4K5 Catalytic 99.0 1.4E-09 3E-14 112.1 11.0 89 624-712 9-98 (267)
86 KOG0032 Ca2+/calmodulin-depend 99.0 8.1E-10 1.8E-14 118.3 9.5 91 624-714 35-130 (382)
87 KOG3207 Beta-tubulin folding c 99.0 4.4E-11 9.6E-16 123.3 -0.2 90 298-387 247-341 (505)
88 KOG0582 Ste20-like serine/thre 99.0 9.8E-10 2.1E-14 113.8 9.3 91 623-713 25-117 (516)
89 cd05072 PTKc_Lyn Catalytic dom 99.0 9.9E-10 2.1E-14 112.9 9.6 89 624-713 6-94 (261)
90 KOG0585 Ca2+/calmodulin-depend 99.0 8E-10 1.7E-14 115.1 8.7 98 624-721 97-226 (576)
91 cd05068 PTKc_Frk_like Catalyti 99.0 7.3E-10 1.6E-14 113.9 8.6 90 623-713 5-94 (261)
92 PF14580 LRR_9: Leucine-rich r 99.0 1.9E-10 4.2E-15 108.7 3.8 110 102-215 15-126 (175)
93 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.0 1.2E-09 2.7E-14 112.8 10.2 84 630-713 1-88 (269)
94 cd05085 PTKc_Fer Catalytic dom 99.0 1.5E-09 3.3E-14 110.7 10.6 84 630-713 1-85 (250)
95 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.0 1.4E-09 3.1E-14 113.3 10.5 90 624-713 4-100 (284)
96 cd05033 PTKc_EphR Catalytic do 99.0 1.6E-09 3.5E-14 111.7 10.5 90 624-713 4-98 (266)
97 cd06631 STKc_YSK4 Catalytic do 99.0 2.1E-09 4.6E-14 110.6 11.4 88 626-713 2-95 (265)
98 cd05598 STKc_LATS Catalytic do 99.0 1.3E-09 2.8E-14 118.7 10.2 89 625-713 2-94 (376)
99 cd05631 STKc_GRK4 Catalytic do 99.0 1.4E-09 3E-14 113.5 10.0 88 626-713 2-93 (285)
100 cd05628 STKc_NDR1 Catalytic do 99.0 1.3E-09 2.7E-14 118.1 9.9 90 624-713 1-94 (363)
101 PF14580 LRR_9: Leucine-rich r 99.0 1.5E-10 3.2E-15 109.5 2.2 60 128-191 17-77 (175)
102 KOG1909 Ran GTPase-activating 99.0 2.5E-11 5.5E-16 121.9 -3.1 87 201-287 156-254 (382)
103 cd05595 STKc_PKB_beta Catalyti 99.0 1.6E-09 3.5E-14 115.2 10.3 84 630-713 1-88 (323)
104 KOG0616 cAMP-dependent protein 99.0 9E-10 1.9E-14 108.4 7.5 90 625-714 45-138 (355)
105 cd05062 PTKc_IGF-1R Catalytic 99.0 1.1E-09 2.4E-14 113.6 8.7 92 622-713 4-102 (277)
106 cd05049 PTKc_Trk Catalytic dom 99.0 1.2E-09 2.6E-14 113.4 8.9 90 624-713 5-101 (280)
107 KOG0611 Predicted serine/threo 99.0 2.6E-10 5.7E-15 116.0 3.6 88 626-713 55-146 (668)
108 cd05605 STKc_GRK4_like Catalyt 99.0 1.5E-09 3.2E-14 113.3 9.5 88 626-713 2-93 (285)
109 KOG0583 Serine/threonine prote 99.0 1.6E-09 3.5E-14 116.1 9.8 92 622-713 15-113 (370)
110 cd05090 PTKc_Ror1 Catalytic do 99.0 1.7E-09 3.7E-14 112.6 9.9 88 625-712 6-99 (283)
111 KOG0531 Protein phosphatase 1, 99.0 7.7E-11 1.7E-15 129.4 -0.4 242 105-387 71-320 (414)
112 cd05571 STKc_PKB Catalytic dom 99.0 2E-09 4.4E-14 114.5 10.5 84 630-713 1-88 (323)
113 cd05597 STKc_DMPK_like Catalyt 99.0 1.9E-09 4E-14 115.2 10.3 89 625-713 2-94 (331)
114 cd05113 PTKc_Btk_Bmx Catalytic 99.0 1.3E-09 2.9E-14 111.7 8.9 88 625-713 5-92 (256)
115 cd06632 STKc_MEKK1_plant Catal 99.0 2.7E-09 5.9E-14 109.2 10.9 88 626-713 2-95 (258)
116 cd05596 STKc_ROCK Catalytic do 99.0 1.2E-09 2.6E-14 118.5 8.6 91 623-713 42-136 (370)
117 KOG0531 Protein phosphatase 1, 99.0 8.6E-11 1.9E-15 129.1 -0.5 242 81-335 71-319 (414)
118 cd05585 STKc_YPK1_like Catalyt 99.0 1.9E-09 4.1E-14 114.1 9.6 82 632-713 1-86 (312)
119 cd05066 PTKc_EphR_A Catalytic 99.0 2.3E-09 4.9E-14 110.6 10.0 90 624-713 4-98 (267)
120 cd05621 STKc_ROCK2 Catalytic d 99.0 1.7E-09 3.7E-14 117.2 9.4 92 622-713 41-136 (370)
121 KOG0658 Glycogen synthase kina 99.0 5.8E-10 1.3E-14 113.2 5.2 83 625-712 25-113 (364)
122 cd05624 STKc_MRCK_beta Catalyt 99.0 2.5E-09 5.4E-14 114.2 10.3 89 625-713 2-94 (331)
123 cd05039 PTKc_Csk_like Catalyti 98.9 2.8E-09 6E-14 109.2 10.1 88 624-713 6-93 (256)
124 cd05034 PTKc_Src_like Catalyti 98.9 2.1E-09 4.6E-14 110.3 9.2 90 623-713 5-94 (261)
125 cd06619 PKc_MKK5 Catalytic dom 98.9 3.9E-09 8.4E-14 109.7 11.3 86 625-710 2-89 (279)
126 cd06656 STKc_PAK3 Catalytic do 98.9 3.3E-09 7.1E-14 111.5 10.8 90 624-713 19-109 (297)
127 cd05601 STKc_CRIK Catalytic do 98.9 2.1E-09 4.6E-14 114.7 9.4 90 625-714 2-95 (330)
128 cd05584 STKc_p70S6K Catalytic 98.9 3.1E-09 6.7E-14 113.1 10.5 84 630-713 2-93 (323)
129 cd06611 STKc_SLK_like Catalyti 98.9 2E-09 4.4E-14 111.9 8.9 90 624-713 5-95 (280)
130 cd05103 PTKc_VEGFR2 Catalytic 98.9 1.5E-09 3.2E-14 116.6 8.0 92 623-714 6-106 (343)
131 cd05093 PTKc_TrkB Catalytic do 98.9 2.7E-09 5.9E-14 111.5 9.8 90 624-713 5-100 (288)
132 KOG0198 MEKK and related serin 98.9 1.9E-09 4.1E-14 111.2 8.3 89 625-713 18-109 (313)
133 cd05593 STKc_PKB_gamma Catalyt 98.9 3.5E-09 7.5E-14 112.9 10.7 83 630-712 1-87 (328)
134 KOG0663 Protein kinase PITSLRE 98.9 1.1E-09 2.3E-14 109.5 6.1 81 624-704 76-161 (419)
135 cd05050 PTKc_Musk Catalytic do 98.9 2.5E-09 5.5E-14 111.6 9.4 91 623-713 4-101 (288)
136 cd05084 PTKc_Fes Catalytic dom 98.9 3.2E-09 7E-14 108.4 9.9 84 630-713 1-86 (252)
137 cd05042 PTKc_Aatyk Catalytic d 98.9 3.5E-09 7.5E-14 109.4 10.3 83 631-713 2-88 (269)
138 cd05108 PTKc_EGFR Catalytic do 98.9 2.7E-09 5.8E-14 113.2 9.6 89 624-713 7-101 (316)
139 cd06620 PKc_MAPKK_Byr1_like Ca 98.9 2.4E-09 5.3E-14 111.6 9.1 89 625-713 6-96 (284)
140 PRK13184 pknD serine/threonine 98.9 3.5E-09 7.6E-14 123.4 11.2 90 624-713 2-95 (932)
141 KOG0661 MAPK related serine/th 98.9 1.9E-10 4.1E-15 119.8 0.6 97 624-721 10-126 (538)
142 PTZ00267 NIMA-related protein 98.9 3.4E-09 7.3E-14 119.0 10.5 88 626-713 69-158 (478)
143 cd05065 PTKc_EphR_B Catalytic 98.9 2.8E-09 6E-14 110.1 9.2 89 625-713 5-98 (269)
144 cd05622 STKc_ROCK1 Catalytic d 98.9 2.9E-09 6.3E-14 115.5 9.7 98 616-713 35-136 (371)
145 cd08228 STKc_Nek6 Catalytic do 98.9 5.5E-09 1.2E-13 107.6 11.2 89 624-712 2-94 (267)
146 KOG4250 TANK binding protein k 98.9 4.3E-10 9.4E-15 122.7 3.0 87 627-713 16-110 (732)
147 cd05582 STKc_RSK_N N-terminal 98.9 3.9E-09 8.4E-14 112.1 10.2 84 630-713 2-91 (318)
148 cd08224 STKc_Nek6_Nek7 Catalyt 98.9 5E-09 1.1E-13 107.9 10.7 90 624-713 2-95 (267)
149 cd05097 PTKc_DDR_like Catalyti 98.9 2.9E-09 6.3E-14 111.6 9.1 90 624-713 5-110 (295)
150 KOG0586 Serine/threonine prote 98.9 3.3E-09 7.2E-14 114.3 9.4 92 623-714 55-149 (596)
151 cd05063 PTKc_EphR_A2 Catalytic 98.9 3.7E-09 8E-14 109.1 9.6 90 624-713 5-99 (268)
152 cd05627 STKc_NDR2 Catalytic do 98.9 3.2E-09 6.9E-14 114.8 9.5 89 625-713 2-94 (360)
153 cd05059 PTKc_Tec_like Catalyti 98.9 3.6E-09 7.9E-14 108.4 9.5 88 625-713 5-92 (256)
154 cd06654 STKc_PAK1 Catalytic do 98.9 5.1E-09 1.1E-13 109.9 10.7 90 624-713 20-110 (296)
155 cd05623 STKc_MRCK_alpha Cataly 98.9 4.1E-09 8.8E-14 112.6 10.1 89 625-713 2-94 (332)
156 cd05046 PTK_CCK4 Pseudokinase 98.9 3.9E-09 8.4E-14 109.4 9.4 92 624-715 5-103 (275)
157 cd05036 PTKc_ALK_LTK Catalytic 98.9 3.7E-09 8.1E-14 109.7 9.3 92 623-714 5-103 (277)
158 cd05077 PTK_Jak1_rpt1 Pseudoki 98.9 4.1E-09 8.9E-14 108.5 9.4 83 630-712 1-96 (262)
159 cd08529 STKc_FA2-like Catalyti 98.9 5.5E-09 1.2E-13 106.8 10.3 89 625-713 1-92 (256)
160 cd07848 STKc_CDKL5 Catalytic d 98.9 3.5E-09 7.6E-14 110.5 8.8 85 625-709 2-89 (287)
161 cd05588 STKc_aPKC Catalytic do 98.9 6.6E-09 1.4E-13 110.8 11.1 84 630-713 1-89 (329)
162 cd05067 PTKc_Lck_Blk Catalytic 98.9 3.6E-09 7.8E-14 108.6 8.8 88 624-713 6-93 (260)
163 cd06629 STKc_MAPKKK_Bck1_like 98.9 4.3E-09 9.4E-14 108.8 9.4 88 626-713 3-101 (272)
164 cd05594 STKc_PKB_alpha Catalyt 98.9 5.8E-09 1.2E-13 111.1 10.6 84 630-713 1-88 (325)
165 KOG4658 Apoptotic ATPase [Sign 98.9 5E-10 1.1E-14 131.3 2.6 105 83-188 546-652 (889)
166 cd05055 PTKc_PDGFR Catalytic d 98.9 4.8E-09 1E-13 110.5 9.8 91 623-713 34-132 (302)
167 cd06630 STKc_MEKK1 Catalytic d 98.9 5.3E-09 1.1E-13 107.8 9.9 89 625-713 1-96 (268)
168 cd05573 STKc_ROCK_NDR_like Cat 98.9 3E-09 6.5E-14 114.5 8.4 89 625-713 2-94 (350)
169 cd06647 STKc_PAK_I Catalytic d 98.9 4.5E-09 9.8E-14 110.2 9.5 90 624-713 19-109 (293)
170 cd05086 PTKc_Aatyk2 Catalytic 98.9 3.8E-09 8.2E-14 109.1 8.7 83 631-713 2-88 (268)
171 cd05608 STKc_GRK1 Catalytic do 98.9 4.6E-09 1E-13 109.3 9.4 81 632-712 1-85 (280)
172 cd05052 PTKc_Abl Catalytic dom 98.9 4.1E-09 9E-14 108.4 8.9 88 625-713 7-95 (263)
173 cd05073 PTKc_Hck Catalytic dom 98.9 4.6E-09 1E-13 107.9 9.1 89 623-713 5-93 (260)
174 cd06638 STKc_myosinIIIA Cataly 98.9 3.6E-09 7.8E-14 110.3 8.4 98 614-712 8-112 (286)
175 cd05095 PTKc_DDR2 Catalytic do 98.9 4.7E-09 1E-13 110.1 9.3 90 624-713 5-112 (296)
176 cd06641 STKc_MST3 Catalytic do 98.9 7.2E-09 1.6E-13 107.6 10.6 87 626-712 6-94 (277)
177 cd07869 STKc_PFTAIRE1 Catalyti 98.9 7.4E-09 1.6E-13 109.0 10.8 90 623-713 4-95 (303)
178 cd07871 STKc_PCTAIRE3 Catalyti 98.9 6.6E-09 1.4E-13 108.6 10.3 89 624-713 5-95 (288)
179 cd06645 STKc_MAP4K3 Catalytic 98.9 4.4E-09 9.5E-14 108.5 8.8 88 625-712 10-98 (267)
180 cd05071 PTKc_Src Catalytic dom 98.9 5.1E-09 1.1E-13 107.8 9.2 88 624-713 6-93 (262)
181 KOG1909 Ran GTPase-activating 98.9 1.2E-10 2.7E-15 117.0 -2.7 254 101-385 25-311 (382)
182 cd06622 PKc_MAPKK_PBS2_like Ca 98.9 3.9E-09 8.4E-14 110.1 8.2 89 625-713 2-92 (286)
183 cd08221 STKc_Nek9 Catalytic do 98.9 7.8E-09 1.7E-13 105.8 10.3 89 626-714 2-93 (256)
184 cd05618 STKc_aPKC_iota Catalyt 98.9 8.6E-09 1.9E-13 110.0 10.9 84 630-713 1-89 (329)
185 cd05092 PTKc_TrkA Catalytic do 98.9 6.5E-09 1.4E-13 108.1 9.8 89 625-713 6-100 (280)
186 cd05037 PTK_Jak_rpt1 Pseudokin 98.9 5.3E-09 1.1E-13 107.2 8.9 82 630-713 1-93 (259)
187 cd05088 PTKc_Tie2 Catalytic do 98.9 6.8E-09 1.5E-13 109.4 9.8 90 624-713 7-101 (303)
188 cd05041 PTKc_Fes_like Catalyti 98.9 8.1E-09 1.8E-13 105.3 10.1 84 630-713 1-85 (251)
189 cd05094 PTKc_TrkC Catalytic do 98.9 6.2E-09 1.3E-13 108.9 9.4 89 625-713 6-100 (291)
190 cd05112 PTKc_Itk Catalytic dom 98.9 7.7E-09 1.7E-13 105.8 9.9 88 625-713 5-92 (256)
191 cd05619 STKc_nPKC_theta Cataly 98.9 8.7E-09 1.9E-13 109.2 10.6 84 630-713 1-89 (316)
192 cd05048 PTKc_Ror Catalytic Dom 98.9 7.2E-09 1.6E-13 107.8 9.8 90 625-714 6-102 (283)
193 KOG0662 Cyclin-dependent kinas 98.9 2.1E-09 4.5E-14 98.0 4.8 95 625-719 3-115 (292)
194 cd06644 STKc_STK10_LOK Catalyt 98.9 9.8E-09 2.1E-13 107.4 10.8 90 624-713 12-102 (292)
195 cd05045 PTKc_RET Catalytic dom 98.9 8.5E-09 1.8E-13 107.8 10.3 88 626-713 2-96 (290)
196 cd06640 STKc_MST4 Catalytic do 98.9 8.1E-09 1.8E-13 107.2 9.9 88 625-712 5-94 (277)
197 cd05070 PTKc_Fyn_Yrk Catalytic 98.9 7.8E-09 1.7E-13 106.1 9.6 88 624-713 6-93 (260)
198 cd08229 STKc_Nek7 Catalytic do 98.9 6.1E-09 1.3E-13 107.3 8.9 89 625-713 3-95 (267)
199 cd08227 PK_STRAD_alpha Pseudok 98.9 8.4E-09 1.8E-13 109.9 10.2 85 629-713 3-92 (327)
200 cd05630 STKc_GRK6 Catalytic do 98.9 9.8E-09 2.1E-13 107.1 10.5 88 626-713 2-93 (285)
201 cd06623 PKc_MAPKK_plant_like C 98.9 1.2E-08 2.7E-13 104.7 11.1 89 625-713 2-92 (264)
202 cd05589 STKc_PKN Catalytic dom 98.9 7.1E-09 1.5E-13 110.4 9.4 86 627-712 2-94 (324)
203 cd05035 PTKc_Axl_like Catalyti 98.9 9.7E-09 2.1E-13 106.1 10.1 88 626-713 1-100 (273)
204 cd05632 STKc_GRK5 Catalytic do 98.9 9.8E-09 2.1E-13 107.1 10.2 88 626-713 2-93 (285)
205 cd05038 PTKc_Jak_rpt2 Catalyti 98.9 1.1E-08 2.3E-13 106.5 10.4 89 625-713 5-101 (284)
206 cd06625 STKc_MEKK3_like Cataly 98.8 1.2E-08 2.7E-13 104.7 10.6 90 624-713 2-97 (263)
207 cd05089 PTKc_Tie1 Catalytic do 98.8 8.8E-09 1.9E-13 108.1 9.8 90 624-713 2-96 (297)
208 cd05098 PTKc_FGFR1 Catalytic d 98.8 8.9E-09 1.9E-13 108.6 9.8 90 624-713 18-117 (307)
209 cd06637 STKc_TNIK Catalytic do 98.8 7.8E-09 1.7E-13 106.8 9.2 92 621-713 3-102 (272)
210 cd06655 STKc_PAK2 Catalytic do 98.8 9.5E-09 2.1E-13 107.9 9.9 89 625-713 20-109 (296)
211 cd06652 STKc_MEKK2 Catalytic d 98.8 1.2E-08 2.7E-13 105.0 10.6 90 624-713 2-99 (265)
212 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.8 2.6E-09 5.6E-14 109.6 5.4 84 630-713 1-92 (258)
213 cd06621 PKc_MAPKK_Pek1_like Ca 98.8 1.2E-08 2.7E-13 106.4 10.6 89 625-713 2-94 (287)
214 PRK09188 serine/threonine prot 98.8 1.2E-08 2.5E-13 108.6 10.5 84 622-708 16-106 (365)
215 cd05043 PTK_Ryk Pseudokinase d 98.8 9.9E-09 2.1E-13 106.6 9.8 91 623-713 5-102 (280)
216 KOG4721 Serine/threonine prote 98.8 1.7E-09 3.7E-14 114.6 4.0 77 629-713 129-205 (904)
217 cd05591 STKc_nPKC_epsilon Cata 98.8 1.1E-08 2.4E-13 108.7 10.3 84 630-713 1-89 (321)
218 cd06643 STKc_SLK Catalytic dom 98.8 1.1E-08 2.3E-13 106.5 9.8 86 627-712 8-94 (282)
219 cd05053 PTKc_FGFR Catalytic do 98.8 7.9E-09 1.7E-13 108.2 8.9 93 621-713 9-109 (293)
220 cd05580 STKc_PKA Catalytic dom 98.8 1E-08 2.3E-13 107.2 9.7 89 625-713 2-94 (290)
221 KOG0578 p21-activated serine/t 98.8 2.7E-09 5.8E-14 114.0 5.2 90 624-713 273-363 (550)
222 cd05604 STKc_SGK3 Catalytic do 98.8 1.2E-08 2.6E-13 108.6 10.3 84 630-713 1-89 (325)
223 cd05590 STKc_nPKC_eta Catalyti 98.8 1.1E-08 2.3E-13 108.8 9.9 84 630-713 1-89 (320)
224 cd06626 STKc_MEKK4 Catalytic d 98.8 1.5E-08 3.2E-13 104.2 10.6 88 626-713 2-92 (264)
225 cd05609 STKc_MAST Catalytic do 98.8 1.4E-08 3E-13 107.1 10.6 89 625-713 2-94 (305)
226 cd05040 PTKc_Ack_like Catalyti 98.8 1.1E-08 2.4E-13 104.7 9.5 83 630-713 1-88 (257)
227 cd06609 STKc_MST3_like Catalyt 98.8 1.3E-08 2.7E-13 105.5 10.0 89 625-713 2-92 (274)
228 cd06628 STKc_MAPKKK_Byr2_like 98.8 1.8E-08 4E-13 103.7 11.1 88 626-713 2-99 (267)
229 cd08218 STKc_Nek1 Catalytic do 98.8 1.3E-08 2.8E-13 104.2 9.8 88 626-713 2-92 (256)
230 cd05570 STKc_PKC Catalytic dom 98.8 1.3E-08 2.9E-13 107.9 10.3 84 630-713 1-89 (318)
231 cd05051 PTKc_DDR Catalytic dom 98.8 1.3E-08 2.8E-13 106.7 10.0 92 623-714 4-113 (296)
232 cd05101 PTKc_FGFR2 Catalytic d 98.8 1.2E-08 2.5E-13 107.6 9.7 90 624-713 15-114 (304)
233 cd05607 STKc_GRK7 Catalytic do 98.8 1.4E-08 3.1E-13 105.4 10.2 80 632-711 1-84 (277)
234 cd05056 PTKc_FAK Catalytic dom 98.8 1.1E-08 2.3E-13 105.8 9.2 88 625-713 7-99 (270)
235 cd05603 STKc_SGK2 Catalytic do 98.8 1.4E-08 3E-13 108.0 10.2 84 630-713 1-89 (321)
236 cd06614 STKc_PAK Catalytic dom 98.8 1.6E-08 3.5E-13 105.4 10.5 92 622-714 17-109 (286)
237 cd07872 STKc_PCTAIRE2 Catalyti 98.8 1.5E-08 3.1E-13 107.1 10.2 88 624-712 6-95 (309)
238 cd06612 STKc_MST1_2 Catalytic 98.8 1.3E-08 2.7E-13 104.1 9.5 88 624-713 3-91 (256)
239 KOG0200 Fibroblast/platelet-de 98.8 6.2E-09 1.3E-13 119.5 7.8 97 619-715 291-397 (609)
240 cd05079 PTKc_Jak1_rpt2 Catalyt 98.8 1.5E-08 3.3E-13 105.5 10.1 88 626-713 6-101 (284)
241 cd08219 STKc_Nek3 Catalytic do 98.8 2.1E-08 4.6E-13 102.6 11.0 88 626-713 2-91 (255)
242 cd05592 STKc_nPKC_theta_delta 98.8 1.6E-08 3.5E-13 107.2 10.5 84 630-713 1-89 (316)
243 cd06613 STKc_MAP4K3_like Catal 98.8 1.8E-08 3.9E-13 103.4 10.5 91 624-714 3-94 (262)
244 cd06642 STKc_STK25-YSK1 Cataly 98.8 4.8E-09 1E-13 108.8 6.3 87 626-712 6-94 (277)
245 cd05575 STKc_SGK Catalytic dom 98.8 1.6E-08 3.5E-13 107.5 10.4 84 630-713 1-89 (323)
246 smart00219 TyrKc Tyrosine kina 98.8 1.9E-08 4.1E-13 102.8 10.5 87 627-713 2-94 (258)
247 cd05044 PTKc_c-ros Catalytic d 98.8 7.3E-09 1.6E-13 106.8 7.5 84 630-713 1-92 (269)
248 KOG0588 Serine/threonine prote 98.8 6.5E-09 1.4E-13 112.6 7.1 88 625-712 13-104 (786)
249 cd05047 PTKc_Tie Catalytic dom 98.8 1.7E-08 3.7E-13 104.3 10.2 84 630-713 1-89 (270)
250 cd05032 PTKc_InsR_like Catalyt 98.8 1E-08 2.2E-13 106.3 8.5 90 624-713 6-102 (277)
251 cd06639 STKc_myosinIIIB Cataly 98.8 1.3E-08 2.8E-13 106.4 9.3 99 614-713 12-117 (291)
252 cd05115 PTKc_Zap-70 Catalytic 98.8 1.6E-08 3.5E-13 103.8 9.8 82 631-713 2-87 (257)
253 cd05615 STKc_cPKC_alpha Cataly 98.8 1.4E-08 3.1E-13 107.9 9.7 88 626-713 2-94 (323)
254 cd08220 STKc_Nek8 Catalytic do 98.8 1.9E-08 4E-13 102.9 10.2 88 626-713 2-92 (256)
255 cd05099 PTKc_FGFR4 Catalytic d 98.8 1.3E-08 2.7E-13 107.9 9.0 90 624-713 12-111 (314)
256 cd07841 STKc_CDK7 Catalytic do 98.8 1.4E-08 3E-13 106.6 9.2 87 626-713 2-94 (298)
257 cd05069 PTKc_Yes Catalytic dom 98.8 1.6E-08 3.5E-13 103.8 9.5 87 625-713 7-93 (260)
258 cd00192 PTKc Catalytic domain 98.8 1.8E-08 3.9E-13 103.1 9.8 85 630-714 1-90 (262)
259 cd08225 STKc_Nek5 Catalytic do 98.8 1.2E-08 2.5E-13 104.5 8.4 88 626-713 2-92 (257)
260 cd05587 STKc_cPKC Catalytic do 98.8 1.8E-08 3.9E-13 107.2 10.2 89 625-713 1-94 (324)
261 cd05057 PTKc_EGFR_like Catalyt 98.8 1.8E-08 3.9E-13 104.6 9.7 89 624-713 7-101 (279)
262 cd05116 PTKc_Syk Catalytic dom 98.8 2.1E-08 4.5E-13 102.8 10.0 82 631-713 2-88 (257)
263 cd05075 PTKc_Axl Catalytic dom 98.8 2.2E-08 4.7E-13 103.5 10.2 86 627-712 2-98 (272)
264 cd06917 STKc_NAK1_like Catalyt 98.8 2.1E-08 4.6E-13 103.9 10.2 88 626-713 3-95 (277)
265 cd06610 STKc_OSR1_SPAK Catalyt 98.8 2.9E-08 6.3E-13 102.1 11.1 89 625-713 2-92 (267)
266 cd07846 STKc_CDKL2_3 Catalytic 98.8 9.4E-09 2E-13 107.1 7.4 87 625-711 2-91 (286)
267 cd07873 STKc_PCTAIRE1 Catalyti 98.8 2.3E-08 5.1E-13 105.1 10.4 89 624-713 6-96 (301)
268 KOG0592 3-phosphoinositide-dep 98.8 7.4E-09 1.6E-13 109.9 6.4 92 623-714 72-168 (604)
269 cd07844 STKc_PCTAIRE_like Cata 98.8 2.1E-08 4.6E-13 104.7 9.9 89 624-713 5-95 (291)
270 cd05614 STKc_MSK2_N N-terminal 98.8 2.4E-08 5.2E-13 106.7 10.5 88 626-713 2-98 (332)
271 cd05578 STKc_Yank1 Catalytic d 98.8 9E-09 2E-13 105.5 6.9 89 625-713 1-93 (258)
272 KOG1989 ARK protein kinase fam 98.8 1.2E-08 2.6E-13 114.6 8.3 90 625-714 38-136 (738)
273 cd07847 STKc_CDKL1_4 Catalytic 98.8 2.2E-08 4.7E-13 104.3 9.8 87 625-711 2-91 (286)
274 cd05058 PTKc_Met_Ron Catalytic 98.8 2.2E-08 4.9E-13 102.8 9.7 84 630-713 1-90 (262)
275 PLN03224 probable serine/threo 98.8 1.2E-08 2.6E-13 113.3 8.1 92 622-713 143-278 (507)
276 cd06605 PKc_MAPKK Catalytic do 98.8 1.8E-08 3.9E-13 103.6 8.9 90 625-714 2-93 (265)
277 cd08528 STKc_Nek10 Catalytic d 98.8 3.1E-08 6.8E-13 102.2 10.8 89 625-713 1-102 (269)
278 cd05617 STKc_aPKC_zeta Catalyt 98.8 2.7E-08 5.8E-13 106.1 10.6 84 630-713 1-89 (327)
279 cd06659 STKc_PAK6 Catalytic do 98.8 1.3E-08 2.9E-13 106.8 8.1 84 629-712 26-110 (297)
280 cd06651 STKc_MEKK3 Catalytic d 98.8 3.8E-08 8.3E-13 101.4 11.4 90 624-713 2-99 (266)
281 cd05054 PTKc_VEGFR Catalytic d 98.8 1.2E-08 2.7E-13 109.1 7.9 91 624-714 7-106 (337)
282 cd05620 STKc_nPKC_delta Cataly 98.8 2.7E-08 5.8E-13 105.5 10.2 84 630-713 1-89 (316)
283 KOG0610 Putative serine/threon 98.8 8.7E-09 1.9E-13 106.0 6.1 88 626-713 79-170 (459)
284 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.8 3.5E-08 7.7E-13 102.7 10.9 87 627-713 7-101 (283)
285 cd07861 STKc_CDK1_euk Catalyti 98.8 3E-08 6.6E-13 103.2 10.4 87 626-713 2-91 (285)
286 cd05574 STKc_phototropin_like 98.8 2.8E-08 6.2E-13 105.2 10.3 89 625-713 2-94 (316)
287 cd05616 STKc_cPKC_beta Catalyt 98.8 2.6E-08 5.7E-13 105.9 10.1 89 625-713 1-94 (323)
288 cd07853 STKc_NLK Catalytic dom 98.8 2E-08 4.3E-13 109.1 9.3 85 625-710 1-93 (372)
289 KOG0577 Serine/threonine prote 98.8 3E-09 6.5E-14 113.2 2.7 87 626-712 28-120 (948)
290 cd05100 PTKc_FGFR3 Catalytic d 98.8 1.9E-08 4.1E-13 107.5 8.9 89 625-713 13-111 (334)
291 cd05610 STKc_MASTL Catalytic d 98.8 2.8E-08 6E-13 115.8 10.9 89 624-712 4-96 (669)
292 cd07832 STKc_CCRK Catalytic do 98.8 3E-08 6.6E-13 103.2 10.2 87 626-713 2-91 (286)
293 cd07836 STKc_Pho85 Catalytic d 98.8 2.7E-08 5.9E-13 103.4 9.8 88 625-713 1-90 (284)
294 cd05091 PTKc_Ror2 Catalytic do 98.8 1.6E-08 3.5E-13 105.2 8.1 87 626-712 7-100 (283)
295 cd06606 STKc_MAPKKK Catalytic 98.8 4.3E-08 9.4E-13 100.0 11.0 88 626-713 2-94 (260)
296 cd05577 STKc_GRK Catalytic dom 98.8 3E-08 6.4E-13 103.0 9.9 82 632-713 1-86 (277)
297 cd06658 STKc_PAK5 Catalytic do 98.8 1.3E-08 2.8E-13 106.6 7.2 84 629-712 27-111 (292)
298 cd06607 STKc_TAO Catalytic dom 98.8 3.1E-08 6.7E-13 104.5 10.0 87 624-711 15-105 (307)
299 KOG4717 Serine/threonine prote 98.7 8.8E-09 1.9E-13 108.0 5.6 94 625-718 19-115 (864)
300 PTZ00266 NIMA-related protein 98.7 2.6E-08 5.7E-13 116.8 10.1 92 622-713 11-107 (1021)
301 cd07859 STKc_TDY_MAPK_plant Ca 98.7 2.7E-08 5.9E-13 106.4 9.5 86 626-712 2-95 (338)
302 cd06657 STKc_PAK4 Catalytic do 98.7 3.6E-08 7.9E-13 103.2 10.2 82 630-711 26-108 (292)
303 cd07870 STKc_PFTAIRE2 Catalyti 98.7 3E-08 6.4E-13 103.7 9.5 90 622-712 3-94 (291)
304 KOG0201 Serine/threonine prote 98.7 3.6E-09 7.8E-14 109.6 2.5 88 625-712 14-103 (467)
305 cd06648 STKc_PAK_II Catalytic 98.7 4.4E-08 9.6E-13 102.2 10.7 88 626-713 21-109 (285)
306 cd06653 STKc_MEKK3_like_1 Cata 98.7 5.2E-08 1.1E-12 100.3 11.0 90 624-713 2-99 (264)
307 cd05082 PTKc_Csk Catalytic dom 98.7 3.8E-08 8.3E-13 100.7 9.9 86 625-713 7-93 (256)
308 PF00069 Pkinase: Protein kina 98.7 3E-08 6.4E-13 101.6 9.1 86 627-712 2-90 (260)
309 cd05060 PTKc_Syk_like Catalyti 98.7 4.2E-08 9.1E-13 100.5 10.1 83 630-713 1-88 (257)
310 cd06617 PKc_MKK3_6 Catalytic d 98.7 3.9E-08 8.4E-13 102.3 9.9 88 625-713 2-92 (283)
311 cd05602 STKc_SGK1 Catalytic do 98.7 4.2E-08 9E-13 104.5 10.3 84 630-713 1-89 (325)
312 KOG0574 STE20-like serine/thre 98.7 2.3E-09 5E-14 105.2 0.6 86 626-713 35-121 (502)
313 cd07860 STKc_CDK2_3 Catalytic 98.7 2.5E-08 5.4E-13 103.8 8.3 87 625-712 1-90 (284)
314 cd05122 PKc_STE Catalytic doma 98.7 6.2E-08 1.3E-12 98.4 11.1 88 626-713 2-90 (253)
315 KOG0594 Protein kinase PCTAIRE 98.7 1.8E-08 4E-13 102.4 6.9 95 626-720 13-135 (323)
316 cd05613 STKc_MSK1_N N-terminal 98.7 4.2E-08 9E-13 102.5 9.9 88 626-713 2-98 (290)
317 KOG0033 Ca2+/calmodulin-depend 98.7 5.9E-10 1.3E-14 106.6 -3.7 85 625-709 12-99 (355)
318 cd06627 STKc_Cdc7_like Catalyt 98.7 6.7E-08 1.5E-12 98.5 11.2 88 626-713 2-92 (254)
319 cd05111 PTK_HER3 Pseudokinase 98.7 3.7E-08 8E-13 102.4 9.3 88 625-713 8-101 (279)
320 cd05572 STKc_cGK_PKG Catalytic 98.7 4.6E-08 9.9E-13 100.5 9.8 82 632-713 1-86 (262)
321 cd05083 PTKc_Chk Catalytic dom 98.7 3.1E-08 6.8E-13 101.2 8.4 85 625-713 7-91 (254)
322 cd06636 STKc_MAP4K4_6 Catalyti 98.7 4.1E-08 8.9E-13 102.1 9.4 99 614-713 6-112 (282)
323 cd08217 STKc_Nek2 Catalytic do 98.7 6.2E-08 1.3E-12 99.4 10.6 88 626-713 2-94 (265)
324 PTZ00036 glycogen synthase kin 98.7 3.7E-08 8.1E-13 109.3 9.4 84 623-711 65-157 (440)
325 KOG0607 MAP kinase-interacting 98.7 1.1E-08 2.3E-13 101.7 4.3 94 615-713 74-169 (463)
326 PTZ00283 serine/threonine prot 98.7 3.5E-08 7.5E-13 111.0 9.1 93 621-713 29-132 (496)
327 KOG1859 Leucine-rich repeat pr 98.7 1.1E-10 2.4E-15 126.8 -10.5 104 226-335 164-268 (1096)
328 cd06608 STKc_myosinIII_like Ca 98.7 6E-08 1.3E-12 100.2 10.1 92 621-713 3-102 (275)
329 cd05109 PTKc_HER2 Catalytic do 98.7 5E-08 1.1E-12 101.3 9.4 89 624-713 7-101 (279)
330 PLN00009 cyclin-dependent kina 98.7 5.6E-08 1.2E-12 101.8 9.8 87 624-711 2-91 (294)
331 cd05579 STKc_MAST_like Catalyt 98.7 3.8E-08 8.3E-13 100.9 8.3 82 632-713 1-86 (265)
332 PHA03212 serine/threonine kina 98.7 5.6E-08 1.2E-12 106.1 9.7 82 624-712 92-174 (391)
333 PF13855 LRR_8: Leucine rich r 98.7 9.5E-09 2.1E-13 79.8 2.7 57 108-164 3-59 (61)
334 cd08215 STKc_Nek Catalytic dom 98.7 8.9E-08 1.9E-12 97.7 10.7 89 626-714 2-93 (258)
335 cd07864 STKc_CDK12 Catalytic d 98.7 6.1E-08 1.3E-12 101.9 9.5 88 622-710 5-105 (302)
336 cd06635 STKc_TAO1 Catalytic do 98.7 7.9E-08 1.7E-12 102.0 10.4 85 626-711 27-115 (317)
337 cd05581 STKc_PDK1 Catalytic do 98.7 3.1E-08 6.7E-13 102.7 7.2 90 625-714 2-96 (280)
338 cd05110 PTKc_HER4 Catalytic do 98.7 5.9E-08 1.3E-12 102.2 9.1 89 624-713 7-101 (303)
339 cd07833 STKc_CDKL Catalytic do 98.7 4.7E-08 1E-12 101.9 8.2 86 625-710 2-90 (288)
340 cd05074 PTKc_Tyro3 Catalytic d 98.7 8.1E-08 1.8E-12 99.3 9.7 87 626-712 1-99 (273)
341 cd07876 STKc_JNK2 Catalytic do 98.7 7.3E-08 1.6E-12 104.2 9.7 83 623-705 20-111 (359)
342 cd08226 PK_STRAD_beta Pseudoki 98.7 8.4E-08 1.8E-12 102.3 10.0 83 631-713 5-92 (328)
343 KOG4658 Apoptotic ATPase [Sign 98.7 2.5E-08 5.4E-13 117.3 6.3 199 83-287 524-730 (889)
344 PF13855 LRR_8: Leucine rich r 98.7 1.7E-08 3.6E-13 78.5 3.3 57 132-188 3-59 (61)
345 cd07842 STKc_CDK8_like Catalyt 98.7 1E-07 2.2E-12 100.9 10.3 85 626-711 2-94 (316)
346 KOG4236 Serine/threonine prote 98.6 6.7E-08 1.4E-12 101.8 8.4 80 629-709 569-651 (888)
347 smart00221 STYKc Protein kinas 98.6 1.4E-07 2.9E-12 94.1 10.4 89 626-714 1-91 (225)
348 cd07835 STKc_CDK1_like Catalyt 98.6 8.4E-08 1.8E-12 99.7 9.2 87 626-713 1-90 (283)
349 cd08530 STKc_CNK2-like Catalyt 98.6 6.6E-08 1.4E-12 98.7 8.1 88 626-713 2-92 (256)
350 KOG2345 Serine/threonine prote 98.6 1.4E-08 3E-13 97.7 2.6 93 624-716 21-119 (302)
351 PRK10345 hypothetical protein; 98.6 1.4E-07 3E-12 92.8 9.7 86 626-713 4-100 (210)
352 cd08223 STKc_Nek4 Catalytic do 98.6 1.3E-07 2.9E-12 96.6 9.9 88 626-713 2-93 (257)
353 cd07862 STKc_CDK6 Catalytic do 98.6 1.7E-07 3.6E-12 98.0 10.8 88 625-713 2-101 (290)
354 cd07843 STKc_CDC2L1 Catalytic 98.6 1.1E-07 2.3E-12 99.6 9.3 89 624-713 5-98 (293)
355 KOG0589 Serine/threonine prote 98.6 4.9E-08 1.1E-12 103.7 6.6 92 624-715 4-99 (426)
356 cd07840 STKc_CDK9_like Catalyt 98.6 1.1E-07 2.4E-12 98.8 9.3 86 626-712 1-91 (287)
357 cd07856 STKc_Sty1_Hog1 Catalyt 98.6 8.5E-08 1.9E-12 102.2 8.5 94 618-712 4-101 (328)
358 PTZ00024 cyclin-dependent prot 98.6 1.1E-07 2.5E-12 101.5 9.4 84 629-713 14-112 (335)
359 cd07837 STKc_CdkB_plant Cataly 98.6 1.3E-07 2.8E-12 99.1 9.5 88 625-713 2-98 (295)
360 PHA03211 serine/threonine kina 98.6 1.3E-07 2.8E-12 105.0 9.6 84 623-713 168-252 (461)
361 cd05586 STKc_Sck1_like Catalyt 98.6 1.2E-07 2.7E-12 101.1 9.2 82 632-713 1-89 (330)
362 cd05583 STKc_MSK_N N-terminal 98.6 1.1E-07 2.5E-12 99.1 8.3 88 626-713 2-98 (288)
363 cd07874 STKc_JNK3 Catalytic do 98.6 1.6E-07 3.4E-12 101.4 9.6 87 622-709 15-110 (355)
364 KOG0694 Serine/threonine prote 98.6 8.4E-08 1.8E-12 104.9 7.3 85 623-707 367-456 (694)
365 cd06633 STKc_TAO3 Catalytic do 98.6 3E-07 6.5E-12 97.3 11.3 86 626-712 23-112 (313)
366 cd07875 STKc_JNK1 Catalytic do 98.6 1.9E-07 4.1E-12 101.1 9.7 86 623-709 23-117 (364)
367 cd07839 STKc_CDK5 Catalytic do 98.6 8.4E-08 1.8E-12 99.8 6.7 86 626-712 2-90 (284)
368 KOG4279 Serine/threonine prote 98.6 5.9E-08 1.3E-12 105.3 5.3 82 631-712 582-664 (1226)
369 cd07831 STKc_MOK Catalytic dom 98.6 2.3E-07 5E-12 96.3 9.7 86 627-713 2-92 (282)
370 cd07868 STKc_CDK8 Catalytic do 98.6 2.7E-07 5.9E-12 97.7 10.3 80 629-711 6-90 (317)
371 cd07830 STKc_MAK_like Catalyti 98.6 1.1E-07 2.5E-12 98.7 7.2 87 626-713 1-90 (283)
372 cd06634 STKc_TAO2 Catalytic do 98.6 2.4E-07 5.1E-12 97.9 9.6 85 626-711 17-105 (308)
373 cd07845 STKc_CDK10 Catalytic d 98.5 2.5E-07 5.4E-12 97.7 9.7 90 623-713 6-100 (309)
374 cd08222 STKc_Nek11 Catalytic d 98.5 1.1E-07 2.5E-12 97.4 6.7 88 626-713 2-95 (260)
375 cd05123 STKc_AGC Catalytic dom 98.5 1.6E-07 3.5E-12 95.5 7.8 82 632-713 1-86 (250)
376 cd07867 STKc_CDC2L6 Catalytic 98.5 3E-07 6.5E-12 97.3 10.1 80 629-711 6-90 (317)
377 cd07878 STKc_p38beta_MAPK11 Ca 98.5 1.7E-07 3.7E-12 100.6 8.3 89 622-711 13-110 (343)
378 cd07852 STKc_MAPK15 Catalytic 98.5 2E-07 4.3E-12 99.8 8.5 89 623-712 6-100 (337)
379 cd07877 STKc_p38alpha_MAPK14 C 98.5 2.9E-07 6.3E-12 98.9 9.7 96 615-711 8-112 (345)
380 PHA03209 serine/threonine kina 98.5 1.8E-07 4E-12 100.9 8.1 83 624-713 66-149 (357)
381 cd07880 STKc_p38gamma_MAPK12 C 98.5 2.8E-07 6.2E-12 98.9 9.4 89 622-711 13-110 (343)
382 cd05633 STKc_GRK3 Catalytic do 98.5 4E-07 8.6E-12 94.7 10.2 83 631-713 1-90 (279)
383 KOG0587 Traf2- and Nck-interac 98.5 2.4E-07 5.2E-12 103.8 8.8 98 615-713 10-114 (953)
384 cd07879 STKc_p38delta_MAPK13 C 98.5 2.9E-07 6.4E-12 98.7 9.3 85 624-709 15-108 (342)
385 cd07865 STKc_CDK9 Catalytic do 98.5 3.4E-07 7.4E-12 96.5 9.7 88 624-712 12-110 (310)
386 cd05611 STKc_Rim15_like Cataly 98.5 4.1E-07 8.9E-12 93.3 10.0 84 630-713 2-90 (260)
387 KOG0666 Cyclin C-dependent kin 98.5 4.2E-08 9.1E-13 97.2 2.2 81 624-704 24-112 (438)
388 cd07854 STKc_MAPK4_6 Catalytic 98.5 2.6E-07 5.6E-12 99.2 8.1 88 624-712 5-107 (342)
389 cd07829 STKc_CDK_like Catalyti 98.5 2.2E-07 4.8E-12 96.4 7.0 86 627-713 2-90 (282)
390 cd07863 STKc_CDK4 Catalytic do 98.5 4.9E-07 1.1E-11 94.3 9.5 87 626-713 2-99 (288)
391 cd08216 PK_STRAD Pseudokinase 98.5 3.2E-07 6.9E-12 97.0 8.1 82 631-713 9-92 (314)
392 cd07858 STKc_TEY_MAPK_plant Ca 98.5 2.6E-07 5.7E-12 98.9 7.4 88 624-712 5-100 (337)
393 cd06616 PKc_MKK4 Catalytic dom 98.5 4.6E-07 1E-11 94.5 8.9 79 626-704 6-87 (288)
394 PHA03207 serine/threonine kina 98.5 4.8E-07 1E-11 99.0 9.4 82 624-711 92-176 (392)
395 PHA03390 pk1 serine/threonine- 98.5 8.3E-07 1.8E-11 91.6 10.5 86 623-713 13-102 (267)
396 cd07849 STKc_ERK1_2_like Catal 98.5 4.1E-07 8.9E-12 97.3 8.5 88 623-711 4-98 (336)
397 cd05606 STKc_beta_ARK Catalyti 98.4 7.5E-07 1.6E-11 92.5 10.0 83 631-713 1-90 (278)
398 cd07834 STKc_MAPK Catalytic do 98.4 3.3E-07 7.2E-12 97.7 7.2 85 626-711 2-94 (330)
399 cd07838 STKc_CDK4_6_like Catal 98.4 7.9E-07 1.7E-11 92.5 9.9 87 626-713 1-98 (287)
400 cd05118 STKc_CMGC Catalytic do 98.4 5E-07 1.1E-11 93.8 8.3 86 627-713 2-90 (283)
401 cd07855 STKc_ERK5 Catalytic do 98.4 3.4E-07 7.4E-12 97.9 7.0 87 624-711 5-98 (334)
402 cd06618 PKc_MKK7 Catalytic dom 98.4 7.5E-07 1.6E-11 93.4 9.5 85 624-709 15-102 (296)
403 KOG0612 Rho-associated, coiled 98.4 3.6E-08 7.8E-13 112.8 -0.8 95 616-710 67-165 (1317)
404 cd07850 STKc_JNK Catalytic dom 98.4 9E-07 2E-11 95.4 9.8 88 623-711 15-111 (353)
405 KOG0579 Ste20-like serine/thre 98.4 5.4E-08 1.2E-12 104.5 -0.1 82 629-710 37-119 (1187)
406 cd00180 PKc Catalytic domain o 98.4 1.8E-06 3.9E-11 84.5 10.5 82 632-713 1-84 (215)
407 KOG0660 Mitogen-activated prot 98.4 7.3E-07 1.6E-11 90.8 6.8 81 623-703 21-109 (359)
408 cd07866 STKc_BUR1 Catalytic do 98.3 8E-07 1.7E-11 93.7 7.3 82 623-704 7-99 (311)
409 TIGR03724 arch_bud32 Kae1-asso 98.3 1.4E-06 3E-11 85.6 8.4 81 631-712 1-89 (199)
410 cd05147 RIO1_euk RIO kinase fa 98.3 7.6E-07 1.6E-11 86.6 6.3 77 630-708 3-105 (190)
411 PTZ00284 protein kinase; Provi 98.3 1.3E-06 2.7E-11 98.0 8.8 93 618-712 123-223 (467)
412 KOG1024 Receptor-like protein 98.3 8.4E-07 1.8E-11 90.7 6.2 98 618-715 278-383 (563)
413 PRK14879 serine/threonine prot 98.3 2E-06 4.4E-11 85.3 9.0 82 630-712 2-91 (211)
414 KOG1859 Leucine-rich repeat pr 98.3 1.6E-08 3.6E-13 110.3 -6.4 15 81-95 108-122 (1096)
415 KOG0599 Phosphorylase kinase g 98.3 2.8E-07 6.1E-12 89.8 2.5 90 624-713 17-116 (411)
416 KOG1151 Tousled-like protein k 98.3 3.3E-07 7.2E-12 94.7 3.0 88 628-715 467-563 (775)
417 cd07851 STKc_p38 Catalytic dom 98.3 7.9E-07 1.7E-11 95.4 6.0 89 623-712 14-111 (343)
418 smart00220 S_TKc Serine/Threon 98.3 1.9E-06 4.2E-11 86.6 8.5 78 636-713 1-80 (244)
419 KOG0576 Mitogen-activated prot 98.3 8E-08 1.7E-12 104.3 -1.8 87 623-709 14-101 (829)
420 KOG2982 Uncharacterized conser 98.3 1.3E-07 2.8E-12 93.4 -0.6 196 85-287 48-262 (418)
421 PRK10359 lipopolysaccharide co 98.3 2.3E-06 5E-11 84.7 8.1 87 623-710 30-133 (232)
422 PRK09605 bifunctional UGMP fam 98.3 2.3E-06 5E-11 97.3 9.3 87 624-711 333-427 (535)
423 KOG0584 Serine/threonine prote 98.2 6E-07 1.3E-11 97.4 3.7 88 628-715 44-138 (632)
424 KOG4645 MAPKKK (MAP kinase kin 98.2 2.3E-07 4.9E-12 107.9 -0.0 91 623-713 1234-1327(1509)
425 PHA03210 serine/threonine kina 98.2 2.1E-06 4.5E-11 97.0 7.2 88 623-711 147-253 (501)
426 cd05145 RIO1_like RIO kinase f 98.2 7.7E-06 1.7E-10 79.7 9.1 76 630-707 3-104 (190)
427 cd07857 STKc_MPK1 Catalytic do 98.2 5.8E-06 1.3E-10 88.3 8.9 85 626-711 2-96 (332)
428 KOG1006 Mitogen-activated prot 98.1 8.8E-07 1.9E-11 86.3 2.0 75 629-703 69-146 (361)
429 KOG1152 Signal transduction se 98.1 2.8E-06 6.2E-11 91.0 5.1 90 624-713 561-663 (772)
430 COG5238 RNA1 Ran GTPase-activa 98.1 3E-07 6.5E-12 89.7 -2.2 162 150-311 88-286 (388)
431 cd05576 STKc_RPK118_like Catal 98.1 7E-06 1.5E-10 83.0 7.6 74 635-713 4-78 (237)
432 KOG0667 Dual-specificity tyros 98.1 5.4E-06 1.2E-10 90.8 7.0 87 625-713 187-280 (586)
433 KOG2982 Uncharacterized conser 98.1 5.4E-07 1.2E-11 89.1 -1.3 38 154-191 71-110 (418)
434 PF08263 LRRNT_2: Leucine rich 98.0 5.7E-06 1.2E-10 58.9 4.2 38 34-73 2-43 (43)
435 KOG1035 eIF-2alpha kinase GCN2 98.0 1.6E-06 3.4E-11 100.6 1.9 78 623-700 478-557 (1351)
436 KOG0690 Serine/threonine prote 98.0 1.5E-06 3.2E-11 86.8 1.1 90 624-713 168-261 (516)
437 KOG0608 Warts/lats-like serine 98.0 3.5E-06 7.5E-11 91.1 3.9 92 624-715 629-724 (1034)
438 KOG4579 Leucine-rich repeat (L 98.0 2.8E-07 6E-12 80.9 -3.9 129 253-389 29-163 (177)
439 cd05144 RIO2_C RIO kinase fami 98.0 2.4E-05 5.1E-10 76.8 8.5 82 626-711 17-122 (198)
440 KOG0986 G protein-coupled rece 97.9 2.1E-06 4.6E-11 89.6 0.5 89 624-712 185-277 (591)
441 KOG0596 Dual specificity; seri 97.9 1.2E-05 2.5E-10 86.2 5.8 79 625-703 362-443 (677)
442 KOG0668 Casein kinase II, alph 97.9 3.4E-06 7.3E-11 80.5 1.6 81 624-707 38-122 (338)
443 KOG4579 Leucine-rich repeat (L 97.9 3.6E-07 7.9E-12 80.2 -5.1 104 84-191 29-136 (177)
444 KOG2120 SCF ubiquitin ligase, 97.9 1.1E-07 2.4E-12 93.8 -9.3 176 107-284 186-373 (419)
445 cd05120 APH_ChoK_like Aminogly 97.8 5.9E-05 1.3E-09 69.7 8.1 77 629-708 3-81 (155)
446 smart00090 RIO RIO-like kinase 97.8 6.7E-05 1.5E-09 75.6 8.7 81 625-709 29-137 (237)
447 KOG2120 SCF ubiquitin ligase, 97.8 3.7E-07 8.1E-12 90.2 -7.7 219 84-307 138-373 (419)
448 PRK15386 type III secretion pr 97.7 0.00021 4.5E-09 76.2 11.5 35 102-140 48-82 (426)
449 KOG1644 U2-associated snRNP A' 97.7 4.7E-05 1E-09 71.8 5.5 83 180-264 44-126 (233)
450 COG5238 RNA1 Ran GTPase-activa 97.7 1.1E-05 2.5E-10 78.9 0.9 180 173-364 87-286 (388)
451 KOG1167 Serine/threonine prote 97.7 4.5E-05 9.8E-10 79.4 5.2 87 621-709 33-124 (418)
452 KOG1644 U2-associated snRNP A' 97.7 7.6E-05 1.6E-09 70.4 6.0 57 132-190 44-100 (233)
453 KOG0696 Serine/threonine prote 97.7 1.3E-05 2.9E-10 82.5 1.0 90 624-713 349-443 (683)
454 TIGR01982 UbiB 2-polyprenylphe 97.6 6.2E-05 1.3E-09 83.0 5.9 87 625-712 119-250 (437)
455 PLN03225 Serine/threonine-prot 97.6 9.9E-05 2.1E-09 84.2 6.8 87 622-712 130-227 (566)
456 KOG0695 Serine/threonine prote 97.6 1.7E-05 3.7E-10 79.5 0.4 88 624-711 250-342 (593)
457 PF12799 LRR_4: Leucine Rich r 97.6 5E-05 1.1E-09 54.2 2.7 34 108-142 3-36 (44)
458 PF12799 LRR_4: Leucine Rich r 97.6 5.9E-05 1.3E-09 53.8 3.0 37 130-167 1-37 (44)
459 KOG0195 Integrin-linked kinase 97.6 1.3E-05 2.8E-10 78.3 -0.6 81 630-711 196-278 (448)
460 KOG0669 Cyclin T-dependent kin 97.5 1.7E-06 3.6E-11 83.6 -7.2 79 626-704 19-108 (376)
461 KOG0604 MAP kinase-activated p 97.5 3.7E-05 8.1E-10 76.4 1.3 79 630-713 68-152 (400)
462 PRK15386 type III secretion pr 97.5 0.00037 8E-09 74.3 8.8 132 82-236 52-187 (426)
463 PHA02882 putative serine/threo 97.5 0.00046 9.9E-09 72.2 9.5 80 624-703 12-110 (294)
464 cd05119 RIO RIO kinase family, 97.4 0.00046 1E-08 66.8 7.8 73 629-705 2-100 (187)
465 PRK12274 serine/threonine prot 97.4 0.0007 1.5E-08 65.9 8.5 79 627-710 5-88 (218)
466 PRK04750 ubiB putative ubiquin 97.4 0.00045 9.8E-09 77.3 8.2 86 624-710 120-251 (537)
467 PF13306 LRR_5: Leucine rich r 97.3 0.00046 1E-08 62.3 6.3 59 102-162 8-66 (129)
468 KOG0983 Mitogen-activated prot 97.3 0.00022 4.7E-09 70.2 3.8 75 629-703 97-174 (391)
469 KOG1027 Serine/threonine prote 97.2 0.00028 6E-09 79.5 4.2 74 626-703 511-586 (903)
470 PF13306 LRR_5: Leucine rich r 97.1 0.001 2.2E-08 60.1 6.5 124 123-253 5-128 (129)
471 COG0515 SPS1 Serine/threonine 97.1 0.0025 5.4E-08 66.7 10.0 86 626-713 2-91 (384)
472 KOG0984 Mitogen-activated prot 97.0 0.00042 9E-09 65.6 3.1 81 623-703 45-128 (282)
473 KOG2739 Leucine-rich acidic nu 97.0 0.00033 7.2E-09 69.0 2.3 87 177-265 42-130 (260)
474 KOG0603 Ribosomal protein S6 k 97.0 0.00043 9.3E-09 76.0 3.3 86 624-713 322-409 (612)
475 KOG3665 ZYG-1-like serine/thre 97.0 0.00028 6E-09 81.5 2.0 86 200-287 171-263 (699)
476 KOG3665 ZYG-1-like serine/thre 97.0 0.00012 2.7E-09 84.3 -1.1 135 130-266 122-265 (699)
477 KOG0664 Nemo-like MAPK-related 96.9 0.00018 3.9E-09 70.6 -0.8 95 626-720 55-171 (449)
478 KOG1166 Mitotic checkpoint ser 96.9 0.00057 1.2E-08 80.2 2.9 87 623-712 697-786 (974)
479 PRK01723 3-deoxy-D-manno-octul 96.9 0.0043 9.3E-08 62.7 8.8 83 629-712 36-139 (239)
480 KOG0614 cGMP-dependent protein 96.8 0.00013 2.9E-09 77.4 -2.9 89 625-713 421-513 (732)
481 KOG1290 Serine/threonine prote 96.7 0.0031 6.8E-08 67.1 6.9 85 624-710 78-175 (590)
482 cd05154 ACAD10_11_like Acyl-Co 96.7 0.0022 4.8E-08 63.7 5.7 81 630-710 4-90 (223)
483 KOG2739 Leucine-rich acidic nu 96.7 0.00084 1.8E-08 66.2 1.9 40 128-167 63-104 (260)
484 KOG2123 Uncharacterized conser 96.5 0.00015 3.2E-09 71.6 -4.5 99 82-184 19-123 (388)
485 cd05151 ChoK Choline Kinase (C 96.4 0.0067 1.4E-07 57.5 6.5 75 630-708 4-79 (170)
486 KOG1163 Casein kinase (serine/ 96.3 0.0046 1E-07 60.1 4.7 85 624-710 15-103 (341)
487 KOG1345 Serine/threonine kinas 96.3 0.0025 5.5E-08 62.9 2.4 84 625-709 25-111 (378)
488 KOG1164 Casein kinase (serine/ 96.2 0.011 2.4E-07 62.7 7.6 87 625-712 19-112 (322)
489 KOG2123 Uncharacterized conser 96.2 0.00018 3.9E-09 70.9 -5.7 85 105-193 18-103 (388)
490 KOG0671 LAMMER dual specificit 96.0 0.0037 8E-08 64.7 2.2 89 623-713 88-183 (415)
491 KOG1165 Casein kinase (serine/ 95.9 0.011 2.3E-07 60.3 5.3 84 625-710 29-116 (449)
492 COG2112 Predicted Ser/Thr prot 95.7 0.027 5.9E-07 52.8 6.4 76 628-709 26-101 (201)
493 KOG4308 LRR-containing protein 95.5 3.9E-05 8.4E-10 84.7 -15.3 182 84-265 89-304 (478)
494 KOG1235 Predicted unusual prot 94.1 0.12 2.5E-06 57.7 7.1 82 625-707 163-289 (538)
495 PF03109 ABC1: ABC1 family; I 93.9 0.03 6.5E-07 49.7 1.8 46 626-675 14-59 (119)
496 PRK10593 hypothetical protein; 93.7 0.39 8.5E-06 50.2 9.9 79 626-707 16-100 (297)
497 COG0661 AarF Predicted unusual 93.7 0.11 2.5E-06 58.0 6.1 86 624-710 126-256 (517)
498 PF00560 LRR_1: Leucine Rich R 93.6 0.026 5.5E-07 33.5 0.4 12 132-143 2-13 (22)
499 PF00560 LRR_1: Leucine Rich R 93.5 0.037 7.9E-07 32.8 1.0 12 323-334 2-13 (22)
500 KOG0670 U4/U6-associated splic 93.1 0.071 1.5E-06 57.6 3.2 100 611-714 421-527 (752)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.3e-59 Score=566.83 Aligned_cols=304 Identities=36% Similarity=0.584 Sum_probs=172.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCCccceeEEEcCCCCCccccCccccCCCCCCE
Q 004953 31 ITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTI 110 (722)
Q Consensus 31 ~~~~~~~~~l~~~k~~l~~~~~~l~~w~~~~~C~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~ 110 (722)
...++|++||++||+.+.++.+.+.+|+..+.| |.|.||+|++. .+++.|+++++++++.++..|..+++|++
T Consensus 25 ~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~-c~w~gv~c~~~------~~v~~L~L~~~~i~~~~~~~~~~l~~L~~ 97 (968)
T PLN00113 25 MLHAEELELLLSFKSSINDPLKYLSNWNSSADV-CLWQGITCNNS------SRVVSIDLSGKNISGKISSAIFRLPYIQT 97 (968)
T ss_pred CCCHHHHHHHHHHHHhCCCCcccCCCCCCCCCC-CcCcceecCCC------CcEEEEEecCCCccccCChHHhCCCCCCE
Confidence 346689999999999998877778999865443 27999999643 25566666666655555555555555555
Q ss_pred EECCCCCCccCCCcccc-CCCCCCEEeccCCcCC----------------------CCCCccCCCCCCCcEEEcccCCCC
Q 004953 111 LDFMWNKISGSIPKEIG-NIKSLELLLLNGNELT----------------------GSLPEELGYLPKLDRIQIDQNYIS 167 (722)
Q Consensus 111 L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~----------------------~~~p~~~~~l~~L~~L~L~~N~l~ 167 (722)
|+|++|++++.+|..+. ++++|++|+|++|+++ +.+|..++++++|++|+|++|.+.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 177 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccc
Confidence 55555555555554432 4444444444444444 444444555555555555555555
Q ss_pred CCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhc
Q 004953 168 GSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY 247 (722)
Q Consensus 168 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 247 (722)
+.+|..+.++++|++|++++|.+.+.+|..+.++++|++|++++|++++.+|..++.+++|+.|++++|.+++ .+|..+
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~l 256 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTG-PIPSSL 256 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceecc-ccChhH
Confidence 5555555555555555555555555555555555555555555555555555555555555555555555554 355555
Q ss_pred cCCCCCcEEEccCCCCccCCC-CCCCCCCccEEEccCCCCCccCCCccc-cCCcCEEEccCCcCcccCCccCCCCCCCCE
Q 004953 248 SNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQR 325 (722)
Q Consensus 248 ~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 325 (722)
.++++|++|++++|++++..| .+..+++|+.|++++|.+.+.+|.... .++|+.|++++|.+++.+|..+..+++|+.
T Consensus 257 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 336 (968)
T PLN00113 257 GNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQV 336 (968)
T ss_pred hCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCE
Confidence 555555555555555554443 244555555555555555555444311 134555555555555555555555555555
Q ss_pred EeCCCCcCcccCChhhh
Q 004953 326 LFIANNSLSGSIPSSIW 342 (722)
Q Consensus 326 L~L~~N~l~~~ip~~~~ 342 (722)
|++++|++++.+|..+.
T Consensus 337 L~L~~n~l~~~~p~~l~ 353 (968)
T PLN00113 337 LQLWSNKFSGEIPKNLG 353 (968)
T ss_pred EECcCCCCcCcCChHHh
Confidence 55555555555554443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=378.57 Aligned_cols=593 Identities=25% Similarity=0.337 Sum_probs=360.4
Q ss_pred CccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEE
Q 004953 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (722)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 159 (722)
.+++|++|++++|.+.+.+|..++++++|++|+|++|.+.+.+|..|.++++|++|+|++|.+.+.+|..++++++|++|
T Consensus 138 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 217 (968)
T PLN00113 138 SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI 217 (968)
T ss_pred ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEE
Confidence 46789999999999998899999999999999999999988999999999999999999999998899999999999999
Q ss_pred EcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCC
Q 004953 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (722)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 239 (722)
+|++|++++.+|..+.++++|++|++++|.+++.+|..+.++++|++|++++|++++..|..+.++++|+.|++++|.++
T Consensus 218 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 218 YLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred ECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeec
Confidence 99999999889999999999999999999998888888999999999999999988888888888889999999988888
Q ss_pred CCCcchhccCCCCCcEEEccCCCCccCCCC-CCCCCCccEEEccCCCCCccCCCcccc-CCcCEEEccCCcCcccCCccC
Q 004953 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNF 317 (722)
Q Consensus 240 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~L~~N~l~~~~~~~~ 317 (722)
+ .+|..+.++++|+.|++++|.+++..|. +..+++|+.|++++|.+++.+|..... .+|+.|++++|++++.+|..+
T Consensus 298 ~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~ 376 (968)
T PLN00113 298 G-EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376 (968)
T ss_pred c-CCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhH
Confidence 7 5788888888888888888888876664 777888888888888888777764222 477777777777777777777
Q ss_pred CCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCC-CCCC-CCCCceEEEccCCcCcCCCCcc-ccc
Q 004953 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFCLNTNAE-QFC 394 (722)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~-~~~~-~~~~l~~l~l~~N~l~~~~~~~-~~~ 394 (722)
..+++|+.|++++|++++.+|..+..+ ++|+.|++++|++++. +..+ .++.++.|++++|.+++..+.. ..+
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 451 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGAC-----RSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCC-----CCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccC
Confidence 777777777777777776666665533 4555566666655543 2223 4555555555555555443210 000
Q ss_pred CCCC-------------------CCCCcccCCCCCCCCCCCCCCCCCCccCCCCCCcccccccceEEEEeeCCCCcCCCc
Q 004953 395 GSHS-------------------DDDNEIDRSTNSTLDCRAQSCPTDYEYSPTSPIRCFCAAPLLVGYRLKSPGLSYFPA 455 (722)
Q Consensus 395 ~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~n~~~~~~p 455 (722)
.... ..+...+++.+... +.. .......+.+..++++.|.+.+.+|
T Consensus 452 ~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~-----------~~~----~~~~~~l~~L~~L~Ls~N~l~~~~p 516 (968)
T PLN00113 452 PSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFS-----------GAV----PRKLGSLSELMQLKLSENKLSGEIP 516 (968)
T ss_pred CCCcEEECcCceeeeecCcccccccceEEECcCCccC-----------Ccc----ChhhhhhhccCEEECcCCcceeeCC
Confidence 0000 00111111111100 000 0011122334455555555555555
Q ss_pred hhH-HHHHHHhhhcccccceeeecCccccCCCceEEEEee-ecccCCCCCC----------cceecccccceeecccccc
Q 004953 456 YKN-LFEEYMTSGLKLNLYQLDIDSFRWEKGPRLKMYLKL-FPVYDNSSGN----------SYVFNASEVGRIRSMFTGW 523 (722)
Q Consensus 456 ~~~-~~~~~~~~~l~ls~n~l~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 523 (722)
..- .+.. -..|++++|++++. +|...+. +. .++. .-+.+.++|. ...++.+ +|.+.|
T Consensus 517 ~~~~~l~~--L~~L~Ls~N~l~~~-~p~~~~~-l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls-----~N~l~~- 585 (968)
T PLN00113 517 DELSSCKK--LVSLDLSHNQLSGQ-IPASFSE-MP-VLSQLDLSQNQLSGEIPKNLGNVESLVQVNIS-----HNHLHG- 585 (968)
T ss_pred hHHcCccC--CCEEECCCCccccc-CChhHhC-cc-cCCEEECCCCcccccCChhHhcCcccCEEecc-----CCccee-
Confidence 320 0000 02344444444431 1100000 00 0000 0000111100 1111211 233333
Q ss_pred ccCCCCCCCCeeeec----ccccCCCCC-CCCCCCCCCCCccceeeehHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhc
Q 004953 524 NIPDSDIFGPYELIN----FTLQGPYRD-VFPPSRNSGISKAALAGIILGAIAGAVTISAIVSLLIVRAHMKNYHAISRR 598 (722)
Q Consensus 524 ~~~~~~~~g~~~~~~----~~l~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (722)
.+|..+.+......+ ..+||.... ..++....+.+..+.+. +++++++++++++++++++++|++++.......
T Consensus 586 ~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (968)
T PLN00113 586 SLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFY-ITCTLGAFLVLALVAFGFVFIRGRNNLELKRVE 664 (968)
T ss_pred eCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeee-hhHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 244333322211111 123443211 11111111112222222 222222222222222222222222211100000
Q ss_pred ccCCCcccc---cCCcccccHHHHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHH
Q 004953 599 RHSSKTSIK---IDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFL 674 (722)
Q Consensus 599 ~~~~~~~~~---~~~~~~~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l 674 (722)
......... ......++++++. ..++..++||+|+||.||+|+. .+|..||||+++..... ..+|+++|
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l 737 (968)
T PLN00113 665 NEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADM 737 (968)
T ss_pred cccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHH
Confidence 000000000 0111234555543 4577788999999999999996 57899999998643221 23568899
Q ss_pred HhcCCCcccceEEEEEeCCeEEEEecccccCcHHHHHH
Q 004953 675 SRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 675 ~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~~~l~ 712 (722)
++++|||||+++|+|.+++..++|||||++|+|.++++
T Consensus 738 ~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 775 (968)
T PLN00113 738 GKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR 775 (968)
T ss_pred hhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh
Confidence 99999999999999999999999999999999988764
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=8e-31 Score=273.71 Aligned_cols=319 Identities=23% Similarity=0.294 Sum_probs=217.8
Q ss_pred CCCCCCCCceeecCCCCCCC---------CccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCC
Q 004953 60 GDPCTSNWTGVLCFNTTMDD---------GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIK 130 (722)
Q Consensus 60 ~~~C~~~w~gv~C~~~~~~~---------~~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 130 (722)
..+|.|.-.-..|++..+.. -++..+.|++++|.++..-+..|-++++|+++++.+|.++ .+|.......
T Consensus 47 pa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sg 125 (873)
T KOG4194|consen 47 PATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESG 125 (873)
T ss_pred CCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccccccc
Confidence 34576666667776544221 2456788999999999888888899999999999999998 7787666667
Q ss_pred CCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecc
Q 004953 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (722)
Q Consensus 131 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 210 (722)
+|+.|+|.+|.|+..-.+.+..++.|+.|||+.|.|+.+.-..|..-.++++|+|++|+|+..-...|.++.+|.+|.|+
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecc
Confidence 79999999999988777888888889999999998887666778888888999999999888878888888888888999
Q ss_pred cCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCC-CCCCCCC--------------
Q 004953 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPN-------------- 275 (722)
Q Consensus 211 ~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~-------------- 275 (722)
.|+++...+..|.++++|+.|+|..|+|.-. --..|.++++|+.|.|..|.++.... .|-.+.+
T Consensus 206 rNrittLp~r~Fk~L~~L~~LdLnrN~iriv-e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 206 RNRITTLPQRSFKRLPKLESLDLNRNRIRIV-EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred cCcccccCHHHhhhcchhhhhhccccceeee-hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhh
Confidence 9988877777888888888888888887521 12345666666666666666654322 2344444
Q ss_pred ----------ccEEEccCCCCCcc-CCCccccCCcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhh
Q 004953 276 ----------LGYLDLSSNQLNGS-IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQS 344 (722)
Q Consensus 276 ----------L~~L~Ls~N~l~~~-ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~ 344 (722)
|+.|+||+|.|... +..+.+.++|++|+|++|+|+...+..|..+..|++|+|++|+++ .+.+..+.
T Consensus 285 n~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~- 362 (873)
T KOG4194|consen 285 NEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFV- 362 (873)
T ss_pred hcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHH-
Confidence 44445555444421 112233345555555555555555555555555555555555554 22222111
Q ss_pred ccCCCCcccEEEccCCcCCCCCCC----C-CCCCceEEEccCCcCc
Q 004953 345 RTLNATETFILDFQNNNLTNISGS----F-NIPPNVTVRLRGNPFC 385 (722)
Q Consensus 345 ~~l~~~~L~~L~ls~N~l~~~~~~----~-~~~~l~~l~l~~N~l~ 385 (722)
.+.+|+.|||++|.|+...++ + .+++|+.|++.+|++.
T Consensus 363 ---~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk 405 (873)
T KOG4194|consen 363 ---GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK 405 (873)
T ss_pred ---HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee
Confidence 135667777777777764321 2 5677777777777764
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=272.99 Aligned_cols=301 Identities=24% Similarity=0.268 Sum_probs=214.7
Q ss_pred ccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
..|++.|+|.+|.|+..-...+..++.|+.||||.|.|+.+.-..|..-.++++|+|++|.|+......|..+.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 34678888888887777777777788888888888888765556677777888888888888877777788888888888
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCC
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 240 (722)
|+.|+++...+..|.++++|+.|+|..|+|.-..--.|.++++|+.|.|..|.+.......|..+.++++|+|..|+++.
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~ 283 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA 283 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh
Confidence 88888887777778888888888888888764444567777777777777777776666677777777788888777765
Q ss_pred CCcchhccCCCCCcEEEccCCCCccCCCC-CCCCCCccEEEccCCCCCccCCCcccc--CCcCEEEccCCcCcccCCccC
Q 004953 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNF 317 (722)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~L~~N~l~~~~~~~~ 317 (722)
.-..++-++++|+.|+|++|.|....++ +...++|++|+|++|+|+ .+++..+. ..|++|+|++|.+...-..+|
T Consensus 284 -vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af 361 (873)
T KOG4194|consen 284 -VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAF 361 (873)
T ss_pred -hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHH
Confidence 2455677778888888888887765443 666777888888888887 55555443 467777777777776666667
Q ss_pred CCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCC-CC-CCCCceEEEccCCcCc
Q 004953 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFC 385 (722)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~-~~-~~~~l~~l~l~~N~l~ 385 (722)
..+.+|+.|||++|.++..|-+.-.-.. .++.|+.|+|.+|+|..|+. .+ .++.|..|+|.+|++-
T Consensus 362 ~~lssL~~LdLr~N~ls~~IEDaa~~f~--gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 362 VGLSSLHKLDLRSNELSWCIEDAAVAFN--GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred HHhhhhhhhcCcCCeEEEEEecchhhhc--cchhhhheeecCceeeecchhhhccCcccceecCCCCcce
Confidence 7777777777777777765544221111 24566677777777776653 33 6667777777777653
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=7.4e-29 Score=260.23 Aligned_cols=294 Identities=26% Similarity=0.354 Sum_probs=257.4
Q ss_pred CccceeEEEcCCCCCcc-ccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcE
Q 004953 80 GYLHLRELQLLNLNLSG-NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (722)
Q Consensus 80 ~~~~l~~L~L~~~~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 158 (722)
.++.|+.+++..|++.. -+|+.+-++..|+.||||+|++. ..|..+..-+++-.|+|++|+|..+....|.+++.|-.
T Consensus 76 ~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 76 DLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLF 154 (1255)
T ss_pred cchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhh
Confidence 35678888999888864 46888999999999999999998 78999999999999999999999555556788999999
Q ss_pred EEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCC-CCCCccCCCCCCCcEEECcCCC
Q 004953 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT-GYLPPELSELPKLLILQLDNNN 237 (722)
Q Consensus 159 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~l~~N~ 237 (722)
|||++|++. .+|..+..+.+|+.|.|++|.+....-..+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|+
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 999999997 67888999999999999999987655566777888999999987644 5689999999999999999999
Q ss_pred CCCCCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCcccc-CCcCEEEccCCcCc-ccCCc
Q 004953 238 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPS 315 (722)
Q Consensus 238 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~L~~N~l~-~~~~~ 315 (722)
+. .+|+.+-++++|+.|+|++|+|+..-.....+.+|++|+||+|+++ .+|..... +.|+.|++.+|+++ .-+|+
T Consensus 234 Lp--~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPS 310 (1255)
T KOG0444|consen 234 LP--IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPS 310 (1255)
T ss_pred CC--cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCcc
Confidence 97 6899999999999999999999976666677889999999999999 88876433 68999999999997 35788
Q ss_pred cCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCC-CCCCceEEEccCCcC
Q 004953 316 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 384 (722)
Q Consensus 316 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~-~~~~l~~l~l~~N~l 384 (722)
.++.+.+|+.+..++|.+. .+|+.++.+ ..|+.|.|+.|++-.+|+.+ -++.+..|++..||-
T Consensus 311 GIGKL~~Levf~aanN~LE-lVPEglcRC-----~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 311 GIGKLIQLEVFHAANNKLE-LVPEGLCRC-----VKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred chhhhhhhHHHHhhccccc-cCchhhhhh-----HHHHHhcccccceeechhhhhhcCCcceeeccCCcC
Confidence 9999999999999999997 899999876 67889999999999999988 788999999999983
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=1.4e-27 Score=250.71 Aligned_cols=293 Identities=26% Similarity=0.361 Sum_probs=234.5
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCcc-CCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISG-SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
.+|+.|.+..|++. .+...+..++.|+.+++..|++.. -+|..+..+..|..|||++|++. ..|..+..-+++-.|+
T Consensus 55 qkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLN 132 (1255)
T KOG0444|consen 55 QKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLN 132 (1255)
T ss_pred hhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEE
Confidence 45777777777776 334456777777888888777642 36777778888888888888888 7788888888888888
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCC
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 240 (722)
|++|+|..+.-..|.+++-|-.|||++|++. .+|.....+..|++|.|++|.+...--..+..+++|+.|.+++.+-+-
T Consensus 133 LS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl 211 (1255)
T KOG0444|consen 133 LSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTL 211 (1255)
T ss_pred cccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchh
Confidence 8888887555556778888888888888887 456677778888888888888765544555667778888888776554
Q ss_pred CCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCc-cccCCcCEEEccCCcCcccCCccCCC
Q 004953 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG-RLSLNITTIKLSNNKLTGTIPSNFSG 319 (722)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~~~~L~~L~L~~N~l~~~~~~~~~~ 319 (722)
.-+|.++..+.+|..+|++.|++...+..+-.+++|+.|+||+|+|+ .+... ..-.+|++|+||.|+++ ..|+.++.
T Consensus 212 ~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcK 289 (1255)
T KOG0444|consen 212 DNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCK 289 (1255)
T ss_pred hcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhh
Confidence 46788999999999999999999866666888999999999999998 33322 12258999999999999 78999999
Q ss_pred CCCCCEEeCCCCcCcc-cCChhhhhhccCCCCcccEEEccCCcCCCCCCCC-CCCCceEEEccCCcC
Q 004953 320 LPRLQRLFIANNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 384 (722)
Q Consensus 320 l~~L~~L~L~~N~l~~-~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~-~~~~l~~l~l~~N~l 384 (722)
+++|+.|++.+|+++- -||+.++.+ .+|+++..++|++.-+|+.+ ....|+.|.|+.|.+
T Consensus 290 L~kL~kLy~n~NkL~FeGiPSGIGKL-----~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 290 LTKLTKLYANNNKLTFEGIPSGIGKL-----IQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred hHHHHHHHhccCcccccCCccchhhh-----hhhHHHHhhccccccCchhhhhhHHHHHhcccccce
Confidence 9999999999998873 589988875 67889999999999998887 788999999999986
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.90 E-value=1.9e-26 Score=231.68 Aligned_cols=293 Identities=32% Similarity=0.436 Sum_probs=231.8
Q ss_pred ccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
+..+..++..+|+++ ..|+.+..+.+|..|++.+|++....| ..-+++.|++||...|.+. .+|..++.|.+|+.|+
T Consensus 136 ~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~-~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~Ly 212 (565)
T KOG0472|consen 136 LLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPE-NHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLY 212 (565)
T ss_pred Hhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCH-HHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHH
Confidence 345777888888887 567888889999999999999985444 4445999999999999887 7888899999999999
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCC
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 240 (722)
|..|+|. ..| .|.++..|++|+++.|.|+-...+....+++|..||+.+|+++ ..|+++.-+.+|+.||+++|.+++
T Consensus 213 L~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~ 289 (565)
T KOG0472|consen 213 LRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS 289 (565)
T ss_pred hhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc
Confidence 9999998 456 8899999999999999998444444568999999999999998 789999999999999999999984
Q ss_pred CCcchhccCCCCCcEEEccCCCCccC----------------------------------C--------CCCCCCCC---
Q 004953 241 TTIPASYSNMSKLLKLSLRNCSLQGP----------------------------------M--------PDLSRIPN--- 275 (722)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~----------------------------------~--------~~l~~l~~--- 275 (722)
+|..++++ +|+.|.+.+|.+... . |+...+.+
T Consensus 290 --Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tki 366 (565)
T KOG0472|consen 290 --LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKI 366 (565)
T ss_pred --CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhh
Confidence 78999999 999999999987310 0 00001112
Q ss_pred -----------------------ccEEEccCCCCCccCCCcc-----------------------c--cCCcCEEEccCC
Q 004953 276 -----------------------LGYLDLSSNQLNGSIPPGR-----------------------L--SLNITTIKLSNN 307 (722)
Q Consensus 276 -----------------------L~~L~Ls~N~l~~~ip~~~-----------------------~--~~~L~~L~L~~N 307 (722)
....+++.|++. ++|... . .++|+.|+|++|
T Consensus 367 L~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN 445 (565)
T KOG0472|consen 367 LDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNN 445 (565)
T ss_pred hcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccc
Confidence 345556666665 444321 0 147889999999
Q ss_pred cCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhhcc-------------------CCCCcccEEEccCCcCCCCCCC
Q 004953 308 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT-------------------LNATETFILDFQNNNLTNISGS 368 (722)
Q Consensus 308 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~-------------------l~~~~L~~L~ls~N~l~~~~~~ 368 (722)
.+. .+|..++.+..|+.|+++.|+|. .+|..+..... .++.+|..|||.+|.+..+|+.
T Consensus 446 ~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~ 523 (565)
T KOG0472|consen 446 LLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI 523 (565)
T ss_pred hhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh
Confidence 888 67788888888999999999987 67766543321 2457899999999999999998
Q ss_pred C-CCCCceEEEccCCcCc
Q 004953 369 F-NIPPNVTVRLRGNPFC 385 (722)
Q Consensus 369 ~-~~~~l~~l~l~~N~l~ 385 (722)
+ .+.++++|.+.+|||.
T Consensus 524 LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccceeEEEecCCccC
Confidence 8 8999999999999996
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.88 E-value=2.4e-25 Score=223.75 Aligned_cols=264 Identities=27% Similarity=0.433 Sum_probs=203.8
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcc
Q 004953 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (722)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (722)
.+..+.++.|.+. .+.+.+.++..|.+|++++|+++ ..|.+++.+..++.|+.++|+++ .+|+.++.+.+|..|+++
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4678889999887 45567888999999999999998 78888999999999999999998 788889999999999999
Q ss_pred cCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCC
Q 004953 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (722)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 242 (722)
+|++. ..|+.++.+..|+.++..+|+++ ..|+.+..+.+|..+++.+|+++...|+.+. ++.|+.|+...|.++ .
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~--t 197 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE--T 197 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh--c
Confidence 99987 56777888888888888888887 4566777778888888888888755444444 777777777777776 4
Q ss_pred cchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCCC
Q 004953 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (722)
Q Consensus 243 ~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 322 (722)
+|..++.+.+|+.|+|.+|++. ..|+|.++..|++|+++.|+|+ .+|.. ...++++
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~-~lpae----------------------~~~~L~~ 253 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIE-MLPAE----------------------HLKHLNS 253 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHH-hhHHH----------------------Hhccccc
Confidence 6777777777777777777776 3446666666666666666665 33332 3447788
Q ss_pred CCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCCCCCCceEEEccCCcC
Q 004953 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 384 (722)
Q Consensus 323 L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~~~~~l~~l~l~~N~l 384 (722)
|..|||..|+++ ++|+.++-+ .+|..||+|+|.|+++|..++.-.++.|.+.|||+
T Consensus 254 l~vLDLRdNklk-e~Pde~clL-----rsL~rLDlSNN~is~Lp~sLgnlhL~~L~leGNPl 309 (565)
T KOG0472|consen 254 LLVLDLRDNKLK-EVPDEICLL-----RSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPL 309 (565)
T ss_pred ceeeeccccccc-cCchHHHHh-----hhhhhhcccCCccccCCcccccceeeehhhcCCch
Confidence 888888888887 788888765 45678888888888888877433888888888886
No 9
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=1.6e-21 Score=221.92 Aligned_cols=259 Identities=27% Similarity=0.345 Sum_probs=207.7
Q ss_pred eeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEccc
Q 004953 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (722)
Q Consensus 84 l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 163 (722)
-..|++++++++ .+|+.+. ++|+.|++++|+++ .+|. .+++|++|+|++|+|+ .+|.. .++|+.|++++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 467899999998 5787775 48999999999999 4664 3689999999999999 45643 46899999999
Q ss_pred CCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCc
Q 004953 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (722)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 243 (722)
|.++. +|.. ..+|+.|++++|+++. +|.. .++|++|++++|++++ +|.. ..+|+.|++++|.+++ +
T Consensus 272 N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~--L 337 (788)
T PRK15387 272 NPLTH-LPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS--L 337 (788)
T ss_pred Cchhh-hhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc--c
Confidence 99874 4443 3578899999999984 4442 4789999999999995 4442 2468889999999984 5
Q ss_pred chhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCCCC
Q 004953 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRL 323 (722)
Q Consensus 244 ~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 323 (722)
|.. ..+|+.|+|++|+|++.++ + .++|+.|++++|+|+ .+|.. ..+|+.|++++|+|++ +|.. .++|
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~LP~-l--p~~L~~L~Ls~N~L~-~LP~l--~~~L~~LdLs~N~Lt~-LP~l---~s~L 404 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLASLPT-L--PSELYKLWAYNNRLT-SLPAL--PSGLKELIVSGNRLTS-LPVL---PSEL 404 (788)
T ss_pred ccc---ccccceEecCCCccCCCCC-C--Ccccceehhhccccc-cCccc--ccccceEEecCCcccC-CCCc---ccCC
Confidence 642 2579999999999996443 2 357899999999999 67753 4689999999999995 4433 3689
Q ss_pred CEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCC-CCCCceEEEccCCcCcCCCC
Q 004953 324 QRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTN 389 (722)
Q Consensus 324 ~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~-~~~~l~~l~l~~N~l~~~~~ 389 (722)
+.|++++|+|+ .+|... .+|+.|++++|+|+.+|..+ .++++..|++++|+|++.++
T Consensus 405 ~~LdLS~N~Ls-sIP~l~--------~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 405 KELMVSGNRLT-SLPMLP--------SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred CEEEccCCcCC-CCCcch--------hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCchHH
Confidence 99999999998 577543 35778999999999998777 78899999999999997753
No 10
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=4.8e-24 Score=214.40 Aligned_cols=313 Identities=22% Similarity=0.241 Sum_probs=208.5
Q ss_pred CCCCCCCCC---ceeecCCCCCC----CCccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCC
Q 004953 59 RGDPCTSNW---TGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKS 131 (722)
Q Consensus 59 ~~~~C~~~w---~gv~C~~~~~~----~~~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 131 (722)
.+.||.|+- ..|.|.+..+. +-++..+.|+|..|.|+...+..|+.+++|+.|||++|+|+.+-|.+|.++++
T Consensus 37 CP~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~ 116 (498)
T KOG4237|consen 37 CPAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLAS 116 (498)
T ss_pred CCCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHh
Confidence 345787766 55889766532 23456788888999998888888888999999999999998888888988888
Q ss_pred CCEEeccC-CcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecc
Q 004953 132 LELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (722)
Q Consensus 132 L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 210 (722)
|..|-+.+ |+|+....+.|++|..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+..+-...|..+..++++.+.
T Consensus 117 l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA 196 (498)
T KOG4237|consen 117 LLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLA 196 (498)
T ss_pred hhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhh
Confidence 88877776 88887777778888888888888888887778888888888888888888875555578888888888888
Q ss_pred cCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCCC-C-CCCCCccEEEccCCCCCc
Q 004953 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-L-SRIPNLGYLDLSSNQLNG 288 (722)
Q Consensus 211 ~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-l-~~l~~L~~L~Ls~N~l~~ 288 (722)
.|.+-. ..+++.+.... .. .|..++...-..-..+.++++....+. + ..+..+..--.+.+...+
T Consensus 197 ~np~ic-----dCnL~wla~~~-a~-------~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~ 263 (498)
T KOG4237|consen 197 QNPFIC-----DCNLPWLADDL-AM-------NPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDS 263 (498)
T ss_pred cCcccc-----ccccchhhhHH-hh-------chhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCC
Confidence 887431 12222222111 11 122223333333333444444322221 1 111111111111222222
Q ss_pred cCCCcccc--CCcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCC
Q 004953 289 SIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 366 (722)
Q Consensus 289 ~ip~~~~~--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~ 366 (722)
..|...|. ++|+.|+|++|+|+++-+.+|.++..+++|.|..|+|. .+-...+ ..+..|+.|+|++|+|+.+.
T Consensus 264 ~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f----~~ls~L~tL~L~~N~it~~~ 338 (498)
T KOG4237|consen 264 ICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLE-FVSSGMF----QGLSGLKTLSLYDNQITTVA 338 (498)
T ss_pred cChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHH-HHHHHhh----hccccceeeeecCCeeEEEe
Confidence 33332222 47777777777777777778888888888888888876 3333322 24567778888888888764
Q ss_pred C-CC-CCCCceEEEccCCcCcCCCC
Q 004953 367 G-SF-NIPPNVTVRLRGNPFCLNTN 389 (722)
Q Consensus 367 ~-~~-~~~~l~~l~l~~N~l~~~~~ 389 (722)
+ .+ .+.++.+|.+-.|||+|+|.
T Consensus 339 ~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 339 PGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred cccccccceeeeeehccCcccCccc
Confidence 3 44 67788999999999999996
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.83 E-value=5.9e-19 Score=216.04 Aligned_cols=278 Identities=19% Similarity=0.233 Sum_probs=168.9
Q ss_pred eeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEccc
Q 004953 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (722)
Q Consensus 84 l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 163 (722)
++.|++.++.+. .+|..| ...+|++|++++|.+. .+|..+..+++|++|+|+++.....+|+ +..+++|+.|+|++
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 455555554443 334444 3456666677666665 4556666667777777766554445553 56666777777766
Q ss_pred CCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCc
Q 004953 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (722)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 243 (722)
|.....+|..+.++++|+.|++++|.....+|..+ ++++|++|++++|......|.. .++|++|++++|.++ .+
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~--~l 740 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE--EF 740 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc--cc
Confidence 65555666666677777777777655444455444 5666777777666544444432 345666777777665 34
Q ss_pred chhccCCCCCcEEEccCCCCccC-------CCC-CCCCCCccEEEccCCCCCccCCCccc-cCCcCEEEccCCcCcccCC
Q 004953 244 PASYSNMSKLLKLSLRNCSLQGP-------MPD-LSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIP 314 (722)
Q Consensus 244 ~~~~~~l~~L~~L~L~~N~l~~~-------~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~L~~N~l~~~~~ 314 (722)
|..+ .+++|++|++.++..... .+. ....++|+.|++++|...+.+|.... .++|+.|++++|...+.+|
T Consensus 741 P~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 741 PSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred cccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 5433 355555555554322110 010 12235778888888876667776522 2578888888776555666
Q ss_pred ccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCC-CCCCceEEEccC
Q 004953 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRG 381 (722)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~-~~~~l~~l~l~~ 381 (722)
..+ .+++|+.|++++|.....+|... .+++.|+|++|.++.+|..+ .+++|+.|++++
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~~--------~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDIS--------TNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CCC-CccccCEEECCCCCccccccccc--------cccCEeECCCCCCccChHHHhcCCCCCEEECCC
Confidence 555 67788888888876555555421 46777888888888777665 677788888877
No 12
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=6e-20 Score=210.60 Aligned_cols=317 Identities=22% Similarity=0.337 Sum_probs=233.0
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCC----CCCC-CCCCCCCC--------------ceeecCCCCCCCCccceeEEE
Q 004953 28 DDSITDPIEVSALRSIKKSLVDDYSKLS----NWNR-GDPCTSNW--------------TGVLCFNTTMDDGYLHLRELQ 88 (722)
Q Consensus 28 ~~~~~~~~~~~~l~~~k~~l~~~~~~l~----~w~~-~~~C~~~w--------------~gv~C~~~~~~~~~~~l~~L~ 88 (722)
++..+.+.|.+.+.++.+.+..|. .+. +|++ .++|...- .-|.|... .++.+.
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~-------~vt~l~ 127 (754)
T PRK15370 56 PPETASPEEIKSKFECLRMLAFPA-YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGGK-------SVTYTR 127 (754)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCc-hhhccccccCCCCcccccCCcchhhheeeecCCceEEecCCC-------cccccc
Confidence 566677889999999999997663 233 4875 46775322 12667543 233333
Q ss_pred cCCCCCcc--------------------c-cC-------ccc-----cCCCCCCEEECCCCCCccCCCccccCCCCCCEE
Q 004953 89 LLNLNLSG--------------------N-LS-------PEI-----GRLSYLTILDFMWNKISGSIPKEIGNIKSLELL 135 (722)
Q Consensus 89 L~~~~l~~--------------------~-~~-------~~~-----~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 135 (722)
..+..... . .+ ..+ +-..+.+.|+++++.++ .+|..+. ++|+.|
T Consensus 128 ~~g~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L 204 (754)
T PRK15370 128 VTESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTL 204 (754)
T ss_pred cccccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEE
Confidence 32211100 0 00 001 11246789999999998 5676553 589999
Q ss_pred eccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCC
Q 004953 136 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (722)
Q Consensus 136 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 215 (722)
+|++|+++ .+|..+. ++|++|++++|+++ .+|..+. .+|+.|+|++|.+. .+|..+. .+|++|++++|+++
T Consensus 205 ~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 205 ILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS 275 (754)
T ss_pred EecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC
Confidence 99999999 5666554 58999999999998 4566554 47999999999998 5666554 58999999999998
Q ss_pred CCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccc
Q 004953 216 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL 295 (722)
Q Consensus 216 ~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 295 (722)
.+|..+. ++|+.|++++|++++ +|..+. ++|+.|++++|+++..+..+ .++|+.|++++|.++ .+|.. +
T Consensus 276 -~LP~~l~--~sL~~L~Ls~N~Lt~--LP~~lp--~sL~~L~Ls~N~Lt~LP~~l--~~sL~~L~Ls~N~Lt-~LP~~-l 344 (754)
T PRK15370 276 -CLPENLP--EELRYLSVYDNSIRT--LPAHLP--SGITHLNVQSNSLTALPETL--PPGLKTLEAGENALT-SLPAS-L 344 (754)
T ss_pred -ccccccC--CCCcEEECCCCcccc--Ccccch--hhHHHHHhcCCccccCCccc--cccceeccccCCccc-cCChh-h
Confidence 4676554 589999999999984 565443 47999999999998654333 368999999999998 57765 4
Q ss_pred cCCcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCC-----C
Q 004953 296 SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-----N 370 (722)
Q Consensus 296 ~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~-----~ 370 (722)
.++|+.|++++|+|+ .+|..+ .++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+.+|..+ .
T Consensus 345 ~~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~-------~sL~~LdLs~N~L~~LP~sl~~~~~~ 413 (754)
T PRK15370 345 PPELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP-------AALQIMQASRNNLVRLPESLPHFRGE 413 (754)
T ss_pred cCcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH-------HHHHHHhhccCCcccCchhHHHHhhc
Confidence 579999999999998 456555 368999999999999 6787764 35889999999999887644 3
Q ss_pred CCCceEEEccCCcCcC
Q 004953 371 IPPNVTVRLRGNPFCL 386 (722)
Q Consensus 371 ~~~l~~l~l~~N~l~~ 386 (722)
.+.+..+++.+|+++.
T Consensus 414 ~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 414 GPQPTRIIVEYNPFSE 429 (754)
T ss_pred CCCccEEEeeCCCccH
Confidence 4778899999999974
No 13
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=3.4e-20 Score=197.50 Aligned_cols=111 Identities=50% Similarity=0.784 Sum_probs=98.0
Q ss_pred CcccccHHHHHHhhcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEE
Q 004953 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (722)
Q Consensus 610 ~~~~~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~ 689 (722)
..+.|+|+++..||++|+..+.||+|+||.||+|.+++|..||||++.....+..++|.+|++++++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45779999999999999999999999999999999999999999998765433156799999999999999999999999
Q ss_pred EeCC-eEEEEecccccCcHHHH-------------HHHHHhhhcc
Q 004953 690 DEEG-EQVLPLKLYIYLFIFQF-------------SIKLIFAIAM 720 (722)
Q Consensus 690 ~~~~-~~~Lv~ey~~~G~L~~~-------------l~~~~~~~a~ 720 (722)
.+.+ +.+||||||++|+|.++ +.+|++|+|.
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~ 185 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAAR 185 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 9988 59999999999999655 5567777663
No 14
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=1.5e-19 Score=207.26 Aligned_cols=251 Identities=26% Similarity=0.414 Sum_probs=200.8
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcc
Q 004953 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (722)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (722)
+.+.|++++++++. +|..+. ++|+.|+|++|+++ .+|..+. .+|++|++++|+++ .+|..+. ++|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 57889999999884 565554 58999999999999 5676654 59999999999998 5676553 579999999
Q ss_pred cCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCC
Q 004953 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (722)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 242 (722)
+|.+. .+|..+. .+|+.|++++|+++. +|..+. ++|++|++++|+++. +|..+. ++|+.|++++|.++.
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-- 318 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-- 318 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc--
Confidence 99998 5677664 589999999999984 676554 589999999999995 455443 479999999999984
Q ss_pred cchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCCC
Q 004953 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (722)
Q Consensus 243 ~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 322 (722)
+|..+ .++|+.|++++|.+++....+. ++|+.|++++|+|+ .+|.. +.++|+.|+|++|+|+. +|..+. ..
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~-lp~~L~~LdLs~N~Lt~-LP~~l~--~s 389 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPET-LPPTITTLDVSRNALTN-LPENLP--AA 389 (754)
T ss_pred CCccc--cccceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChh-hcCCcCEEECCCCcCCC-CCHhHH--HH
Confidence 56544 3689999999999987544443 68999999999998 67765 45799999999999995 454443 47
Q ss_pred CCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCC
Q 004953 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (722)
Q Consensus 323 L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~ 364 (722)
|+.|++++|+|+ .+|..+..+.. ..+.+..|++.+|.|+.
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~-~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRG-EGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhh-cCCCccEEEeeCCCccH
Confidence 999999999998 78877655432 24678899999999974
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=4e-21 Score=211.93 Aligned_cols=277 Identities=25% Similarity=0.316 Sum_probs=232.4
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcc
Q 004953 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (722)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (722)
+|+.||+++|.++ ..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|.|.+|.+. ..|..+..+++|+.|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 5899999988886 67788889999999999999988 67788899999999999999888 888899999999999999
Q ss_pred cCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCC
Q 004953 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (722)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 242 (722)
.|.+. .+|..+..++.++.+..++|..... ++... ++++++..|.+.+.++..+..+.. .|++.+|.+.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~--- 191 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME--- 191 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---
Confidence 99987 6788888899999999999933322 22222 888899999998888888887777 7999999885
Q ss_pred cchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCCC
Q 004953 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (722)
Q Consensus 243 ~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 322 (722)
-..+..+.+|+.|....|++.... -..++|+.|+.++|.++ .+-....+.+|+++++++|++++. |++++.+.+
T Consensus 192 -~~dls~~~~l~~l~c~rn~ls~l~---~~g~~l~~L~a~~n~l~-~~~~~p~p~nl~~~dis~n~l~~l-p~wi~~~~n 265 (1081)
T KOG0618|consen 192 -VLDLSNLANLEVLHCERNQLSELE---ISGPSLTALYADHNPLT-TLDVHPVPLNLQYLDISHNNLSNL-PEWIGACAN 265 (1081)
T ss_pred -hhhhhhccchhhhhhhhcccceEE---ecCcchheeeeccCcce-eeccccccccceeeecchhhhhcc-hHHHHhccc
Confidence 246778889999999999887422 13468999999999998 444444667999999999999965 499999999
Q ss_pred CCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCC-CCCCceEEEccCCcCc
Q 004953 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 385 (722)
Q Consensus 323 L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~-~~~~l~~l~l~~N~l~ 385 (722)
|+.+++.+|+|+ .+|..++.. ++|+.|++.+|.++-+++.. ...++++|+|..|.+.
T Consensus 266 le~l~~n~N~l~-~lp~ri~~~-----~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~ 323 (1081)
T KOG0618|consen 266 LEALNANHNRLV-ALPLRISRI-----TSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP 323 (1081)
T ss_pred ceEecccchhHH-hhHHHHhhh-----hhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc
Confidence 999999999996 888887654 78899999999999999887 6999999999999885
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=4.7e-19 Score=201.94 Aligned_cols=239 Identities=26% Similarity=0.341 Sum_probs=190.5
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEc
Q 004953 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (722)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 161 (722)
.+++.|++.+|+++. +|. .+++|++|+|++|+++ .+|.. .++|+.|++++|.++ .+|.. .++|+.|++
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~L 289 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWI 289 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhc---hhhcCEEEC
Confidence 478999999999985 453 2579999999999999 45643 478999999999998 45543 367889999
Q ss_pred ccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCC
Q 004953 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (722)
Q Consensus 162 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 241 (722)
++|+++. +|. ..++|+.|++++|++++ +|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|+|++
T Consensus 290 s~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~- 356 (788)
T PRK15387 290 FGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS- 356 (788)
T ss_pred cCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-
Confidence 9999984 454 24789999999999986 3432 2468889999999985 4532 2589999999999984
Q ss_pred CcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCC
Q 004953 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (722)
Q Consensus 242 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 321 (722)
+|.. ..+|+.|++++|+|+. +|.+ ..+|+.|++++|+|+ .+|.. ..+|+.|++++|+|++ +|.. ..
T Consensus 357 -LP~l---p~~L~~L~Ls~N~L~~-LP~l--~~~L~~LdLs~N~Lt-~LP~l--~s~L~~LdLS~N~Lss-IP~l---~~ 422 (788)
T PRK15387 357 -LPTL---PSELYKLWAYNNRLTS-LPAL--PSGLKELIVSGNRLT-SLPVL--PSELKELMVSGNRLTS-LPML---PS 422 (788)
T ss_pred -CCCC---Ccccceehhhcccccc-Cccc--ccccceEEecCCccc-CCCCc--ccCCCEEEccCCcCCC-CCcc---hh
Confidence 5653 3578899999999986 4432 357999999999999 57753 4689999999999995 5543 35
Q ss_pred CCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCC
Q 004953 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (722)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~ 365 (722)
+|+.|++++|+|+ .+|..++.+ ++|+.|+|++|+|++.
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~~L-----~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLIHL-----SSETTVNLEGNPLSER 460 (788)
T ss_pred hhhhhhhccCccc-ccChHHhhc-----cCCCeEECCCCCCCch
Confidence 7889999999998 899988754 6789999999999974
No 17
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.80 E-value=1.1e-21 Score=216.30 Aligned_cols=280 Identities=31% Similarity=0.443 Sum_probs=193.8
Q ss_pred eeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCC--------------------CCEEeccCCcCC
Q 004953 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKS--------------------LELLLLNGNELT 143 (722)
Q Consensus 84 l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~--------------------L~~L~L~~n~l~ 143 (722)
++.+++..+.+.+.++.++..+.+ .|||.+|.+... .+..+.+ |+.|+.++|.+.
T Consensus 158 ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~ 232 (1081)
T KOG0618|consen 158 IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLT 232 (1081)
T ss_pred chhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhhhccchhhhhhhhcccceEEecCcchheeeeccCcce
Confidence 555666666666666666655555 566666665511 1223333 333444444433
Q ss_pred CCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCC
Q 004953 144 GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS 223 (722)
Q Consensus 144 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 223 (722)
...+ -..-.+|++++++.|++++ +|+++..+.+|+.++..+|+++ .+|..+...++|+.|++..|.+. .+|+...
T Consensus 233 ~~~~--~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le 307 (1081)
T KOG0618|consen 233 TLDV--HPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLE 307 (1081)
T ss_pred eecc--ccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccc
Confidence 1111 1122457777777777773 4577777777777777777774 45666666667777777777666 4555566
Q ss_pred CCCCCcEEECcCCCCCCCCcchhc--------------------------cCCCCCcEEEccCCCCccC-CCCCCCCCCc
Q 004953 224 ELPKLLILQLDNNNFEGTTIPASY--------------------------SNMSKLLKLSLRNCSLQGP-MPDLSRIPNL 276 (722)
Q Consensus 224 ~l~~L~~L~l~~N~l~~~~~~~~~--------------------------~~l~~L~~L~L~~N~l~~~-~~~l~~l~~L 276 (722)
.++.|++|+|..|++.. .|..+ ..++.|+.|++.+|.+++. .|.+.++.+|
T Consensus 308 ~~~sL~tLdL~~N~L~~--lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hL 385 (1081)
T KOG0618|consen 308 GLKSLRTLDLQSNNLPS--LPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHL 385 (1081)
T ss_pred ccceeeeeeehhccccc--cchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccce
Confidence 66677777777666652 23211 1345688889999999874 4678889999
Q ss_pred cEEEccCCCCCccCCCcccc--CCcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccE
Q 004953 277 GYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 354 (722)
Q Consensus 277 ~~L~Ls~N~l~~~ip~~~~~--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~ 354 (722)
+.|+|++|++. .+|...+. ..|++|+||+|+++ .+|..+..++.|++|...+|++. ..| .+.+ ++.|+.
T Consensus 386 KVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~-----l~qL~~ 456 (1081)
T KOG0618|consen 386 KVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ-----LPQLKV 456 (1081)
T ss_pred eeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh-----cCcceE
Confidence 99999999998 88887555 48999999999999 66789999999999999999998 677 5543 478999
Q ss_pred EEccCCcCCCC--CCCCCCCCceEEEccCCcC
Q 004953 355 LDFQNNNLTNI--SGSFNIPPNVTVRLRGNPF 384 (722)
Q Consensus 355 L~ls~N~l~~~--~~~~~~~~l~~l~l~~N~l 384 (722)
+|++.|+|+.+ +.....++|++|+++||.+
T Consensus 457 lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 457 LDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred EecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 99999999974 3444568999999999995
No 18
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.80 E-value=3e-18 Score=209.82 Aligned_cols=287 Identities=19% Similarity=0.220 Sum_probs=196.1
Q ss_pred ccceeEEEcCCCC------CccccCccccCCC-CCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCC
Q 004953 81 YLHLRELQLLNLN------LSGNLSPEIGRLS-YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYL 153 (722)
Q Consensus 81 ~~~l~~L~L~~~~------l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 153 (722)
+.+++.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..| ...+|++|++.+|++. .++..+..+
T Consensus 557 m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l 633 (1153)
T PLN03210 557 MRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSL 633 (1153)
T ss_pred CccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccC
Confidence 4456666664432 2334555565553 5777777777765 566665 4677788888877776 566677777
Q ss_pred CCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEEC
Q 004953 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQL 233 (722)
Q Consensus 154 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l 233 (722)
++|+.|+|+++.....+|. +..+++|+.|+|++|.....+|..+.++++|++|++++|.....+|..+ ++++|+.|++
T Consensus 634 ~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~L 711 (1153)
T PLN03210 634 TGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNL 711 (1153)
T ss_pred CCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeC
Confidence 7888888877654445553 6677778888887776656677777777788888887765444555544 6777888888
Q ss_pred cCCCCCCCCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCC---c---cCCCc--cccCCcCEEEcc
Q 004953 234 DNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN---G---SIPPG--RLSLNITTIKLS 305 (722)
Q Consensus 234 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~---~---~ip~~--~~~~~L~~L~L~ 305 (722)
++|.... .+|.. ..+|+.|++++|.+... |....+++|++|++.++... + .+++. ...++|+.|+|+
T Consensus 712 sgc~~L~-~~p~~---~~nL~~L~L~~n~i~~l-P~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls 786 (1153)
T PLN03210 712 SGCSRLK-SFPDI---STNISWLDLDETAIEEF-PSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLS 786 (1153)
T ss_pred CCCCCcc-ccccc---cCCcCeeecCCCccccc-cccccccccccccccccchhhccccccccchhhhhccccchheeCC
Confidence 7775433 24432 45677788888777643 33235667777777664321 0 11111 123589999999
Q ss_pred CCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcC-CCCCCCCCCCCceEEEccCCcC
Q 004953 306 NNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL-TNISGSFNIPPNVTVRLRGNPF 384 (722)
Q Consensus 306 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l-~~~~~~~~~~~l~~l~l~~N~l 384 (722)
+|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|.. ..++.. ..+++.|+|++|.+
T Consensus 787 ~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~------~L~sL~~L~Ls~c~~L~~~p~~--~~nL~~L~Ls~n~i 858 (1153)
T PLN03210 787 DIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI------NLESLESLDLSGCSRLRTFPDI--STNISDLNLSRTGI 858 (1153)
T ss_pred CCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC------CccccCEEECCCCCcccccccc--ccccCEeECCCCCC
Confidence 999888999999999999999999987666888765 357899999999743 334332 35788999999988
Q ss_pred c
Q 004953 385 C 385 (722)
Q Consensus 385 ~ 385 (722)
.
T Consensus 859 ~ 859 (1153)
T PLN03210 859 E 859 (1153)
T ss_pred c
Confidence 6
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=7.9e-20 Score=194.13 Aligned_cols=202 Identities=24% Similarity=0.283 Sum_probs=112.8
Q ss_pred EEEcCCCCCc-cccCccccCCCCCCEEECCCCCCccC----CCccccCCCCCCEEeccCCcCCC------CCCccCCCCC
Q 004953 86 ELQLLNLNLS-GNLSPEIGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTG------SLPEELGYLP 154 (722)
Q Consensus 86 ~L~L~~~~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~l~ 154 (722)
.|+|.++.++ ......+..+..|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3556666665 23344456666777888877777432 34445566777777777776652 1233455566
Q ss_pred CCcEEEcccCCCCCCCchhhcCcCC---CCEEECCCccccC----CCCcCCCCC-CccceeecccCCCCCC----CCccC
Q 004953 155 KLDRIQIDQNYISGSLPKSFANLNK---TRHFHMNNNSISG----QIPPELSRL-PSLVHMLLDNNNLTGY----LPPEL 222 (722)
Q Consensus 155 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~L~~N~l~~~----~~~~l 222 (722)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. +...+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 7777777777776555555554444 7777777776652 122233444 5666666666666532 22234
Q ss_pred CCCCCCcEEECcCCCCCCCC---cchhccCCCCCcEEEccCCCCccCCC-----CCCCCCCccEEEccCCCCC
Q 004953 223 SELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLN 287 (722)
Q Consensus 223 ~~l~~L~~L~l~~N~l~~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~ 287 (722)
..+++|+.|++++|.+++.. ++..+..+++|+.|++++|.+++... .+..+++|++|++++|.++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 44556666666666665311 12223344566666666666543211 2344555666666666554
No 20
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.70 E-value=2.7e-19 Score=180.33 Aligned_cols=283 Identities=19% Similarity=0.195 Sum_probs=205.9
Q ss_pred eEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEccc-
Q 004953 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ- 163 (722)
Q Consensus 85 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~- 163 (722)
..++-++.+++ .+|..+. +.-..++|..|+|+.+.|.+|+.+++|+.|||++|.|+.+-|++|.++++|..|-+.+
T Consensus 49 ~~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~ 125 (498)
T KOG4237|consen 49 GIVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGN 125 (498)
T ss_pred ceEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcC
Confidence 34566666665 4454443 3567899999999988888999999999999999999999999999999987776665
Q ss_pred CCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCc
Q 004953 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (722)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 243 (722)
|+|+....+.|.++..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+.......|..+.+++.+.+..|.+-.
T Consensus 126 NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic--- 202 (498)
T KOG4237|consen 126 NKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC--- 202 (498)
T ss_pred CchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc---
Confidence 89997777889999999999999998887777888888888888888888886555578888888888888877532
Q ss_pred chhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEE----EccCCcCcccCCccCCC
Q 004953 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTI----KLSNNKLTGTIPSNFSG 319 (722)
Q Consensus 244 ~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L----~L~~N~l~~~~~~~~~~ 319 (722)
..+++.+... +..|.+ .+++..-..-..+.++++. .++...+.-+++.+ ....+.....+...|..
T Consensus 203 ---dCnL~wla~~-~a~~~i-----etsgarc~~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~ 272 (498)
T KOG4237|consen 203 ---DCNLPWLADD-LAMNPI-----ETSGARCVSPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKK 272 (498)
T ss_pred ---ccccchhhhH-Hhhchh-----hcccceecchHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhh
Confidence 1223322221 111111 2333444444556666665 44444444333333 22333333334457999
Q ss_pred CCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCC-C-CCCCceEEEccCCcCcCCC
Q 004953 320 LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNT 388 (722)
Q Consensus 320 l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~-~-~~~~l~~l~l~~N~l~~~~ 388 (722)
+++|+.|+|++|++++.-+.+|.. +..++.|.|..|+|..+... + .+..|++|+|.+|++++-.
T Consensus 273 L~~L~~lnlsnN~i~~i~~~aFe~-----~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~ 338 (498)
T KOG4237|consen 273 LPNLRKLNLSNNKITRIEDGAFEG-----AAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVA 338 (498)
T ss_pred cccceEeccCCCccchhhhhhhcc-----hhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEe
Confidence 999999999999999766666654 46789999999999987654 3 8899999999999998754
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=7.9e-19 Score=186.45 Aligned_cols=274 Identities=20% Similarity=0.249 Sum_probs=188.4
Q ss_pred EEECCCCCCc-cCCCccccCCCCCCEEeccCCcCCCC----CCccCCCCCCCcEEEcccCCCCC------CCchhhcCcC
Q 004953 110 ILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYISG------SLPKSFANLN 178 (722)
Q Consensus 110 ~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 178 (722)
.|+|..+.++ ...+..|..+.+|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788888887 34455567888899999999998642 45556778889999999998863 2345677888
Q ss_pred CCCEEECCCccccCCCCcCCCCCCc---cceeecccCCCCC----CCCccCCCC-CCCcEEECcCCCCCCC---Ccchhc
Q 004953 179 KTRHFHMNNNSISGQIPPELSRLPS---LVHMLLDNNNLTG----YLPPELSEL-PKLLILQLDNNNFEGT---TIPASY 247 (722)
Q Consensus 179 ~L~~L~L~~N~l~~~~~~~l~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~l~~N~l~~~---~~~~~~ 247 (722)
+|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. .+...+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999997655555554444 9999999998873 223345566 8899999999998742 123456
Q ss_pred cCCCCCcEEEccCCCCccCC-----CCCCCCCCccEEEccCCCCCccCCCc-----cccCCcCEEEccCCcCcccCCccC
Q 004953 248 SNMSKLLKLSLRNCSLQGPM-----PDLSRIPNLGYLDLSSNQLNGSIPPG-----RLSLNITTIKLSNNKLTGTIPSNF 317 (722)
Q Consensus 248 ~~l~~L~~L~L~~N~l~~~~-----~~l~~l~~L~~L~Ls~N~l~~~ip~~-----~~~~~L~~L~L~~N~l~~~~~~~~ 317 (722)
..+++|+.|++++|.+++.. ..+...++|++|++++|.+++..... ...++|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 67788999999999888521 12455678999999999886332211 112578888888888875333222
Q ss_pred C-----CCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCC-----CCC-CC-CCceEEEccCCcC
Q 004953 318 S-----GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS-----GSF-NI-PPNVTVRLRGNPF 384 (722)
Q Consensus 318 ~-----~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~-----~~~-~~-~~l~~l~l~~N~l 384 (722)
. ..+.|+.|++++|.++......+.... -..++|+.+++++|.++... ..+ .. +.+.++++.+|||
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~-~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVL-AEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHH-hcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 2 247888888888888732222221110 02267888888888888542 122 23 5777888888775
No 22
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.69 E-value=3.9e-17 Score=177.32 Aligned_cols=102 Identities=23% Similarity=0.371 Sum_probs=86.9
Q ss_pred ccccHHHHHHhhcCc---------cCCCeeecCCCeeEEEEEeC----CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc
Q 004953 612 RSFTYGEMALATNNF---------NSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL 677 (722)
Q Consensus 612 ~~~~~~~~~~~t~~f---------~~~~~iG~G~fG~Vy~g~l~----~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l 677 (722)
..+||+|--.|...| ..+++||.|.||+||+|.++ ....||||.++.+.. +++.+|..|+.||+++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 456787765554443 44579999999999999974 246899999987644 4457899999999999
Q ss_pred CCCcccceEEEEEeCCeEEEEecccccCcHHHHHHH
Q 004953 678 HHRNLVSLVGYCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 678 ~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
.||||++|.|........+||.|||++|+|..|||+
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~ 723 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQ 723 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhh
Confidence 999999999999999999999999999999999998
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=9.3e-19 Score=157.22 Aligned_cols=163 Identities=26% Similarity=0.530 Sum_probs=121.6
Q ss_pred ccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCC
Q 004953 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (722)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 181 (722)
+-++++++.|.||+|+++ .+|..+..+.+|+.|++++|+++ .+|..+..+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345567777888888887 56667888888888888888887 67777888888888888888776 6777788888888
Q ss_pred EEECCCccccC-CCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccC
Q 004953 182 HFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN 260 (722)
Q Consensus 182 ~L~L~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~ 260 (722)
.|||.+|++.. ..|..|..++.|+-|++++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.++.|++|.+.+
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll--~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL--SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh--hCcHHHHHHHHHHHHhccc
Confidence 88888777753 46777777777777777777776 67777777888888888777775 4677777777777777777
Q ss_pred CCCccCCCCC
Q 004953 261 CSLQGPMPDL 270 (722)
Q Consensus 261 N~l~~~~~~l 270 (722)
|+++-.+|++
T Consensus 183 nrl~vlppel 192 (264)
T KOG0617|consen 183 NRLTVLPPEL 192 (264)
T ss_pred ceeeecChhh
Confidence 7776555543
No 24
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=2.5e-18 Score=154.48 Aligned_cols=162 Identities=27% Similarity=0.533 Sum_probs=149.7
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEc
Q 004953 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (722)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 161 (722)
.+++.|.|+.|.++ .+|+.+..+.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. ..|..|+.+|.|+.|||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 47899999999998 67889999999999999999998 78999999999999999999998 89999999999999999
Q ss_pred ccCCCCC-CCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCC
Q 004953 162 DQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (722)
Q Consensus 162 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 240 (722)
.+|++.. .+|..|..++.|+.|+|++|.+. .+|...+++++|+.|.+.+|.+- .+|.+++.+..|++|.+.+|+++
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~- 186 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT- 186 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-
Confidence 9999874 57999999999999999999998 78889999999999999999987 68999999999999999999998
Q ss_pred CCcchhccCC
Q 004953 241 TTIPASYSNM 250 (722)
Q Consensus 241 ~~~~~~~~~l 250 (722)
.+|..++++
T Consensus 187 -vlppel~~l 195 (264)
T KOG0617|consen 187 -VLPPELANL 195 (264)
T ss_pred -ecChhhhhh
Confidence 577776654
No 25
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=3.5e-16 Score=173.35 Aligned_cols=94 Identities=23% Similarity=0.388 Sum_probs=82.6
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~ 694 (722)
.+.+....+.||+|+||+||+|+.. +.+.||||.++..... .+.+|.+|+++|++++|||||+|+|.|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3455566788999999999999863 3468999999876554 67799999999999999999999999999999
Q ss_pred EEEEecccccCcHHHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~~~ 715 (722)
.++|+|||.+|||.+||+.+.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~s 584 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARS 584 (774)
T ss_pred eEEEEEecccccHHHHHHhhC
Confidence 999999999999999999764
No 26
>PLN03150 hypothetical protein; Provisional
Probab=99.60 E-value=5.7e-15 Score=169.17 Aligned_cols=159 Identities=35% Similarity=0.553 Sum_probs=126.2
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC---CCCceeecCCCCCCCCccceeEEEcCCCCCccccCccccC
Q 004953 28 DDSITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCT---SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGR 104 (722)
Q Consensus 28 ~~~~~~~~~~~~l~~~k~~l~~~~~~l~~w~~~~~C~---~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~~~~ 104 (722)
....+.+.|++||+.+|+.+.++.. .+|. +++|. +.|.||.|..... .....++.|+|+++.+.|.+|..++.
T Consensus 365 ~~~~t~~~~~~aL~~~k~~~~~~~~--~~W~-g~~C~p~~~~w~Gv~C~~~~~-~~~~~v~~L~L~~n~L~g~ip~~i~~ 440 (623)
T PLN03150 365 AESKTLLEEVSALQTLKSSLGLPLR--FGWN-GDPCVPQQHPWSGADCQFDST-KGKWFIDGLGLDNQGLRGFIPNDISK 440 (623)
T ss_pred cccccCchHHHHHHHHHHhcCCccc--CCCC-CCCCCCcccccccceeeccCC-CCceEEEEEECCCCCccccCCHHHhC
Confidence 3445677899999999999875532 4786 46773 3699999953211 11235889999999999999999999
Q ss_pred CCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCc-CCCCEE
Q 004953 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANL-NKTRHF 183 (722)
Q Consensus 105 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L 183 (722)
+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|++++.+|+.++++++|+.|+|++|.+++.+|..+..+ .++..+
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l 520 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASF 520 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceE
Confidence 9999999999999998899889999999999999999998888888889999999999888888888877653 355666
Q ss_pred ECCCccc
Q 004953 184 HMNNNSI 190 (722)
Q Consensus 184 ~L~~N~l 190 (722)
++.+|..
T Consensus 521 ~~~~N~~ 527 (623)
T PLN03150 521 NFTDNAG 527 (623)
T ss_pred EecCCcc
Confidence 7666653
No 27
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.58 E-value=5.2e-15 Score=150.93 Aligned_cols=91 Identities=25% Similarity=0.355 Sum_probs=79.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
.+|...+.||+|+||+||+|+.+ ++..||||.+... ..+..+-...|+++|+.++|||||+|+.++..++..+||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 45666777999999999999964 5889999999665 34445568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHHH
Q 004953 701 LYIYLFIFQFSIKL 714 (722)
Q Consensus 701 y~~~G~L~~~l~~~ 714 (722)
||.+|||.+|+++.
T Consensus 90 yC~gGDLs~yi~~~ 103 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRR 103 (429)
T ss_pred eCCCCCHHHHHHHc
Confidence 99999999988775
No 28
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.54 E-value=2.1e-14 Score=151.65 Aligned_cols=91 Identities=27% Similarity=0.383 Sum_probs=81.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhc-HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~-~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
......+.||+|.||+|..++...+..||||+++...... +++|.+|+++|++++|||||+|+|.|..++...+++|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 3444567899999999999999888999999998765443 479999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHH
Q 004953 703 IYLFIFQFSIKL 714 (722)
Q Consensus 703 ~~G~L~~~l~~~ 714 (722)
++|+|.+|+.+.
T Consensus 618 EnGDLnqFl~ah 629 (807)
T KOG1094|consen 618 ENGDLNQFLSAH 629 (807)
T ss_pred hcCcHHHHHHhc
Confidence 999999998774
No 29
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.49 E-value=1.4e-14 Score=153.49 Aligned_cols=97 Identities=26% Similarity=0.498 Sum_probs=86.4
Q ss_pred HHHHHhhcCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 004953 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 617 ~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~ 695 (722)
++|+..+.++...+.+|-|.||.||.|+|+. ..+||||.++.... ..++|..|+.+|+.++|||+|+|+|.|..+...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 5666666677778899999999999999965 67999999987543 467999999999999999999999999999999
Q ss_pred EEEecccccCcHHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~~ 714 (722)
|||.|||.||+|.||+|++
T Consensus 339 YIiTEfM~yGNLLdYLRec 357 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLREC 357 (1157)
T ss_pred EEEEecccCccHHHHHHHh
Confidence 9999999999999999984
No 30
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.46 E-value=3.7e-14 Score=150.14 Aligned_cols=90 Identities=27% Similarity=0.449 Sum_probs=79.8
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+.+...+.||+|.||.||.|.+.....||||.++... ...++|.+|+.+|.+++|+|||+++|+|..++..+||+|||
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 33444567899999999999999777799999998763 33568999999999999999999999999988999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
+.|+|.+||++
T Consensus 284 ~~GsLl~yLr~ 294 (468)
T KOG0197|consen 284 PKGSLLDYLRT 294 (468)
T ss_pred ccCcHHHHhhh
Confidence 99999999987
No 31
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=1.8e-13 Score=140.89 Aligned_cols=91 Identities=18% Similarity=0.318 Sum_probs=75.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhc--CCCcccceEEEEEeC----CeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE----GEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l--~H~Niv~l~g~~~~~----~~~~L 697 (722)
......+.||+|.||+||+|.| .|+.||||.+.. .+++.|.+|.++...+ ||+||..+++.=..+ .+.+|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 3456668999999999999999 688999999953 3466899999998864 999999999876543 26899
Q ss_pred EecccccCcHHHHHHHHHhhh
Q 004953 698 PLKLYIYLFIFQFSIKLIFAI 718 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~~~~~~ 718 (722)
|.||.|+|+|+|||.+...++
T Consensus 287 vTdYHe~GSL~DyL~r~tv~~ 307 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNRNTVTT 307 (513)
T ss_pred eeecccCCcHHHHHhhccCCH
Confidence 999999999999999866544
No 32
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.43 E-value=3e-13 Score=143.41 Aligned_cols=85 Identities=29% Similarity=0.411 Sum_probs=72.7
Q ss_pred CCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhc--HHHHHHHHHHHHhcCCCcccceEEEEEeCC-eEEEEecccccC
Q 004953 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQVLPLKLYIYL 705 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~--~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-~~~Lv~ey~~~G 705 (722)
.+.+|+|+||+||+|.+++...||||++....... .++|.+|+.+|.+++|||||+++|+|.++. ...+|+|||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 45599999999999999544449999997643222 468999999999999999999999999877 799999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
+|.+++.+
T Consensus 126 sL~~~l~~ 133 (362)
T KOG0192|consen 126 SLSVLLHK 133 (362)
T ss_pred cHHHHHhh
Confidence 99988854
No 33
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.43 E-value=1.8e-13 Score=147.21 Aligned_cols=98 Identities=28% Similarity=0.395 Sum_probs=81.6
Q ss_pred HHHHHhhcCccCCCeeecCCCeeEEEEEeCC--C--cE-EEEEEccC---CChhcHHHHHHHHHHHHhcCCCcccceEEE
Q 004953 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPD--G--TV-VAVKRAQE---GSLQGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (722)
Q Consensus 617 ~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~~--g--~~-vAVK~l~~---~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~ 688 (722)
+.|+...++....+.||+|+||.||+|.+.. + .. ||||..+. ......++|++|+++|.+++|||||+++|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3344444555556899999999999999743 2 23 89999875 234556789999999999999999999999
Q ss_pred EEeCCeEEEEecccccCcHHHHHHHH
Q 004953 689 CDEEGEQVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 689 ~~~~~~~~Lv~ey~~~G~L~~~l~~~ 714 (722)
+..+...++|||+|.+|+|.+|+++.
T Consensus 230 a~~~~Pl~ivmEl~~gGsL~~~L~k~ 255 (474)
T KOG0194|consen 230 AVLEEPLMLVMELCNGGSLDDYLKKN 255 (474)
T ss_pred EcCCCccEEEEEecCCCcHHHHHHhC
Confidence 99999999999999999999999884
No 34
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.43 E-value=8.3e-14 Score=152.32 Aligned_cols=92 Identities=30% Similarity=0.435 Sum_probs=77.8
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCC----cEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDG----TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g----~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+...++||+|+||+||||.| ++| .+||+|++... ..+...+|.+|+-+|++++|||+++|+|+|.... ..||.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 44568999999999999986 554 47999998654 3445678999999999999999999999998755 88999
Q ss_pred cccccCcHHHHHHHHHhhh
Q 004953 700 KLYIYLFIFQFSIKLIFAI 718 (722)
Q Consensus 700 ey~~~G~L~~~l~~~~~~~ 718 (722)
+|||+|.|.||.+..+..|
T Consensus 777 q~mP~G~LlDyvr~hr~~i 795 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNI 795 (1177)
T ss_pred HhcccchHHHHHHHhhccc
Confidence 9999999999988866544
No 35
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.40 E-value=2.6e-13 Score=156.25 Aligned_cols=91 Identities=32% Similarity=0.513 Sum_probs=79.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC--Cc----EEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD--GT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~--g~----~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
...+..+.||+|.||.||+|.+.+ |. .||||.+++.. .+...+|.+|+.+|++++|||||+++|.|.+.+..+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 445566899999999999999743 33 48999997654 455578999999999999999999999999999999
Q ss_pred EEecccccCcHHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~~ 714 (722)
|++|||++|||..|+|+.
T Consensus 772 i~leyM~gGDL~sflr~~ 789 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRES 789 (1025)
T ss_pred EEehhcccCcHHHHHHhc
Confidence 999999999999999986
No 36
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.37 E-value=2.8e-12 Score=133.17 Aligned_cols=86 Identities=26% Similarity=0.322 Sum_probs=72.0
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHH--hcCCCcccceEEEEEeCC----eEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS--RLHHRNLVSLVGYCDEEG----EQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~--~l~H~Niv~l~g~~~~~~----~~~Lv~ 699 (722)
.+...+||+|+||.||||.+ +++.||||++.. ++...|.+|-+|.+ .++|+||++++|+-.... +.+||+
T Consensus 212 l~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 44457899999999999999 569999999963 34457888888766 569999999999877655 899999
Q ss_pred cccccCcHHHHHHHHH
Q 004953 700 KLYIYLFIFQFSIKLI 715 (722)
Q Consensus 700 ey~~~G~L~~~l~~~~ 715 (722)
||.+.|+|.+||++.+
T Consensus 288 ~fh~kGsL~dyL~~nt 303 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKANT 303 (534)
T ss_pred eeccCCcHHHHHHhcc
Confidence 9999999999988744
No 37
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=3e-12 Score=130.79 Aligned_cols=88 Identities=20% Similarity=0.305 Sum_probs=73.1
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChh-------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~-------~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
.|-..+.+|+|+||.|-.|.- ++|+.||||.++..... ......+|+++|++++|||||++++++..+++.|
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY 252 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence 345568899999999999984 57999999998542111 1223579999999999999999999999999999
Q ss_pred EEecccccCcHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSI 712 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~ 712 (722)
+|+|||++|+|++++.
T Consensus 253 mVlE~v~GGeLfd~vv 268 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVV 268 (475)
T ss_pred EEEEEecCccHHHHHH
Confidence 9999999999988743
No 38
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.30 E-value=1e-13 Score=146.40 Aligned_cols=198 Identities=26% Similarity=0.419 Sum_probs=116.8
Q ss_pred CCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceee
Q 004953 129 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 208 (722)
Q Consensus 129 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 208 (722)
+.--...||+.|++. .+|..+..+..|+.+.|+.|.+. .+|..+.++..|++|||+.|+++ ..|..++.++ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 344455666666666 56666666666666666666665 45556666666666666666655 3333333332 44444
Q ss_pred cccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCc
Q 004953 209 LDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNG 288 (722)
Q Consensus 209 L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~ 288 (722)
+++|+++ . +|+.++...+|..||.+.|.+....+.+.++.+|+.|.+..|++.
T Consensus 150 ~sNNkl~-~-------------------------lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~- 202 (722)
T KOG0532|consen 150 VSNNKLT-S-------------------------LPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE- 202 (722)
T ss_pred EecCccc-c-------------------------CCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-
Confidence 5555544 3 444444444455555555555444444555555555556666655
Q ss_pred cCCCccccCCcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCc
Q 004953 289 SIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNN 361 (722)
Q Consensus 289 ~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~ 361 (722)
.+|.......|..||++.|+++ .+|-.|.+|..|++|-|.+|.++ .-|..++...... -.++|+..-.+
T Consensus 203 ~lp~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVH--IFKyL~~qA~q 271 (722)
T KOG0532|consen 203 DLPEELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVH--IFKYLSTQACQ 271 (722)
T ss_pred hCCHHHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhcccee--eeeeecchhcc
Confidence 5555544456777777777777 66778888888888888888887 6666666432221 24566666554
No 39
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.29 E-value=8.8e-14 Score=146.94 Aligned_cols=195 Identities=30% Similarity=0.448 Sum_probs=157.3
Q ss_pred ccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
+......|++.|.+. .+|..++.+..|+.+.|..|.+. .+|..+.++..|++|||+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 345667888888887 67888888888888999999887 78888999999999999999998 7788888777 88899
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCC
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~ 240 (722)
+++|+++ .+|..++.+..|..|+.+.|.+. .+|..++++.+|+.|.+..|++. .+|+++..+ .|..||++.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 9999987 67778888888999999999887 56778888899999999999888 566677755 4888999999987
Q ss_pred CCcchhccCCCCCcEEEccCCCCccCCCCC---CCCCCccEEEccCCC
Q 004953 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDL---SRIPNLGYLDLSSNQ 285 (722)
Q Consensus 241 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l---~~l~~L~~L~Ls~N~ 285 (722)
.+|..|.+|+.|++|.|.+|.+...+..+ +...-.++|+..-++
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhcc
Confidence 68889999999999999999988654432 333345667766664
No 40
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=1.1e-11 Score=129.74 Aligned_cols=96 Identities=27% Similarity=0.416 Sum_probs=76.5
Q ss_pred CccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhc--HHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVLPL 699 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~--~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~Lv~ 699 (722)
.|+..+.||+|.||.||||. ..+|+.||+|+++-...+. ..-..+||.+|++++|||||+|.|...+. +..|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 35556789999999999998 6789999999997544222 23457999999999999999999999886 7899999
Q ss_pred cccccC---------------cHHHHHHHHHhhhcc
Q 004953 700 KLYIYL---------------FIFQFSIKLIFAIAM 720 (722)
Q Consensus 700 ey~~~G---------------~L~~~l~~~~~~~a~ 720 (722)
|||++- .+.-|.+|...|+.+
T Consensus 198 eYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~ 233 (560)
T KOG0600|consen 198 EYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEY 233 (560)
T ss_pred ecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHH
Confidence 999872 225567777766643
No 41
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.22 E-value=1.2e-11 Score=135.44 Aligned_cols=200 Identities=30% Similarity=0.432 Sum_probs=97.6
Q ss_pred EEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCC-CCcEEEcccCCCCCCCchhhcCcCCCCEEECCCc
Q 004953 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (722)
Q Consensus 110 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (722)
.+++..|.+.. ....+..++.++.|++.+|.++ .+|.....++ +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 34454444421 1222333445555555555555 3333344442 4555555555544 22333444444444444444
Q ss_pred cccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCC
Q 004953 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (722)
Q Consensus 189 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 268 (722)
++ + .++...+.+++|+.|++++|+++ .+|........|++|.+++|++...+.
T Consensus 174 ~l------------------------~-~l~~~~~~~~~L~~L~ls~N~i~--~l~~~~~~~~~L~~l~~~~N~~~~~~~ 226 (394)
T COG4886 174 DL------------------------S-DLPKLLSNLSNLNNLDLSGNKIS--DLPPEIELLSALEELDLSNNSIIELLS 226 (394)
T ss_pred hh------------------------h-hhhhhhhhhhhhhheeccCCccc--cCchhhhhhhhhhhhhhcCCcceecch
Confidence 44 4 22222224445555555555554 244433344445555555554333333
Q ss_pred CCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhh
Q 004953 269 DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (722)
Q Consensus 269 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~ 341 (722)
.+..+.++..+.+.+|++...+.......+++.|++++|+++.... +..+.+|+.|++++|.++...|...
T Consensus 227 ~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 227 SLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhhhcccccccccCCceeeeccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 4445555555555555554211111122356666666666664433 7777778888888887776555543
No 42
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.22 E-value=1.3e-11 Score=135.13 Aligned_cols=199 Identities=37% Similarity=0.524 Sum_probs=159.4
Q ss_pred EEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCC-CCCEEeccCCcCCCCCCccCCCCCCCcEEEcccC
Q 004953 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (722)
Q Consensus 86 ~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 164 (722)
.+++..+.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5777777764332 23455688999999999998 5666667774 9999999999998 66667899999999999999
Q ss_pred CCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcc
Q 004953 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIP 244 (722)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 244 (722)
+++ .+|.....+++|+.|++++|++. .+|........|++|.+++|.+. ..+..+..+.++..+.+.+|++.. .+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~--~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED--LP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee--cc
Confidence 998 45555558899999999999998 45555556677999999999644 456678888899999999998863 47
Q ss_pred hhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCc
Q 004953 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG 293 (722)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (722)
..+..++++++|++++|.++.... +..+.+++.|++++|.+....|..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred chhccccccceecccccccccccc-ccccCccCEEeccCccccccchhh
Confidence 788889999999999999986555 888899999999999998655554
No 43
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=4.4e-11 Score=128.45 Aligned_cols=89 Identities=21% Similarity=0.381 Sum_probs=77.0
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
..|...+.||+|+|++||+++- ..|..||+|++.... ....+...+||++.++++|||||++++|+.+.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3477889999999999999995 789999999996532 233456899999999999999999999999999999999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
|+|++|+|..+++
T Consensus 98 ELC~~~sL~el~K 110 (592)
T KOG0575|consen 98 ELCHRGSLMELLK 110 (592)
T ss_pred EecCCccHHHHHH
Confidence 9999999955443
No 44
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.20 E-value=1.7e-11 Score=118.55 Aligned_cols=97 Identities=24% Similarity=0.417 Sum_probs=82.6
Q ss_pred CccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhc--HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~--~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
.|...+.+|+|.||.||+|. ...|+.||||+++.....+ .....+|++.|+.++|+||+.|++++-..+..-||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 35556789999999999998 4679999999997653322 24678999999999999999999999999999999999
Q ss_pred cc---------------cCcHHHHHHHHHhhhccC
Q 004953 702 YI---------------YLFIFQFSIKLIFAIAMF 721 (722)
Q Consensus 702 ~~---------------~G~L~~~l~~~~~~~a~~ 721 (722)
|+ .++...|+.++..|+|++
T Consensus 83 m~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~ 117 (318)
T KOG0659|consen 83 MPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYC 117 (318)
T ss_pred ccccHHHHhcccccccCHHHHHHHHHHHHHHHHHH
Confidence 98 367788999999999863
No 45
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.17 E-value=6.4e-11 Score=129.39 Aligned_cols=95 Identities=22% Similarity=0.376 Sum_probs=79.8
Q ss_pred HhhcCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcC-CCcccceEEEEEeC
Q 004953 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE 692 (722)
Q Consensus 621 ~~t~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~ 692 (722)
...++|...+.||+|+||.||+|+.. .+..||||+++.... ...+.|.+|++++.+++ |||||+++|+|.+.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 34567888899999999999999852 134799999975433 23457999999999996 99999999999999
Q ss_pred CeEEEEecccccCcHHHHHHHHH
Q 004953 693 GEQVLPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~~l~~~~ 715 (722)
+..++|||||++|+|.+++.+..
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~ 136 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNR 136 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhh
Confidence 99999999999999999998754
No 46
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.16 E-value=3.4e-11 Score=128.50 Aligned_cols=92 Identities=24% Similarity=0.441 Sum_probs=76.2
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC---CC--cEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP---DG--TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~---~g--~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~ 695 (722)
.++.....++||.|.||.||+|++. .| ..||||.-+.. ...+.+.|.+|+.+|++++|||||+|+|.|.+ ...
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 3345566789999999999999963 23 35889988764 34445679999999999999999999999965 678
Q ss_pred EEEecccccCcHHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~~ 714 (722)
+||||.++.|+|..|+++.
T Consensus 466 WivmEL~~~GELr~yLq~n 484 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQN 484 (974)
T ss_pred eEEEecccchhHHHHHHhc
Confidence 9999999999999998873
No 47
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.15 E-value=5.6e-11 Score=129.12 Aligned_cols=94 Identities=26% Similarity=0.433 Sum_probs=79.4
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe------CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l------~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
..++|...+.||+|+||.||+|.. .++..||||+++... ....+.+.+|++++..+ +|||||+++|+|...+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345677789999999999999973 235689999997533 23345789999999999 8999999999999999
Q ss_pred eEEEEecccccCcHHHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~~~ 715 (722)
..++||||+++|+|.+++++..
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~ 134 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKR 134 (375)
T ss_pred cceeeehhccCCcHHHHHHhcc
Confidence 9999999999999999998643
No 48
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.15 E-value=7.5e-11 Score=121.25 Aligned_cols=86 Identities=35% Similarity=0.492 Sum_probs=72.0
Q ss_pred CCeeecCCCeeEEEEEeC-----CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 629 STQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~-----~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+.||.|.||.||+|.+. .+..|+||.++... ....++|.+|++.+.+++||||++++|+|...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999986 25689999996543 334678999999999999999999999999888899999999
Q ss_pred ccCcHHHHHHHH
Q 004953 703 IYLFIFQFSIKL 714 (722)
Q Consensus 703 ~~G~L~~~l~~~ 714 (722)
++|+|.+++.+.
T Consensus 84 ~~g~L~~~L~~~ 95 (259)
T PF07714_consen 84 PGGSLDDYLKSK 95 (259)
T ss_dssp TTEBHHHHHHHT
T ss_pred cccccccccccc
Confidence 999999887764
No 49
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.15 E-value=2.7e-11 Score=119.11 Aligned_cols=96 Identities=27% Similarity=0.380 Sum_probs=78.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
.|+....+|+|+||.|||+.-+ +|+.||||++..... .-.+-.++|++++++++|+|+|.|+..|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 3555568999999999999964 599999999865422 2224578999999999999999999999999999999999
Q ss_pred cccCc---------------HHHHHHHHHhhhcc
Q 004953 702 YIYLF---------------IFQFSIKLIFAIAM 720 (722)
Q Consensus 702 ~~~G~---------------L~~~l~~~~~~~a~ 720 (722)
+++-- +..|++|++.+|++
T Consensus 83 ~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~ 116 (396)
T KOG0593|consen 83 CDHTVLHELERYPNGVPSELVKKYLYQLLKAIHF 116 (396)
T ss_pred cchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhh
Confidence 97633 36788888888875
No 50
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.14 E-value=1.3e-10 Score=119.85 Aligned_cols=90 Identities=21% Similarity=0.334 Sum_probs=77.0
Q ss_pred cCccCCCeeecCCCeeEEEEEeC----CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~----~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.+|+..+.||+|+||.||+|.+. .+..||+|.++.... ...+.|.+|+.++.+++|||||+++|++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 35677789999999999999863 356899999976432 3345799999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++++
T Consensus 85 ~e~~~~~~L~~~l~~ 99 (266)
T cd05064 85 TEYMSNGALDSFLRK 99 (266)
T ss_pred EEeCCCCcHHHHHHh
Confidence 999999999888765
No 51
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.14 E-value=1.6e-10 Score=119.30 Aligned_cols=96 Identities=22% Similarity=0.215 Sum_probs=84.0
Q ss_pred HHHHhhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 618 ~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
|++.+++++.....||+|+||.||+|... ++..||+|.+........+.|.+|++++++++|+||++++|++..++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34567778888889999999999999854 57889999987665555678999999999999999999999999999999
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+|+||+++++|.+++++
T Consensus 82 lv~e~~~~~~L~~~l~~ 98 (268)
T cd06624 82 IFMEQVPGGSLSALLRS 98 (268)
T ss_pred EEEecCCCCCHHHHHHH
Confidence 99999999999988765
No 52
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=2.4e-11 Score=115.87 Aligned_cols=90 Identities=24% Similarity=0.325 Sum_probs=78.3
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.++|+..+.+|+|.||.||.|..+ .+-.||+|++.... .+-++++.+|+++-+.++||||.+++||+.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 356888999999999999999865 46789999985432 22346899999999999999999999999999999999
Q ss_pred ecccccCcHHHHHH
Q 004953 699 LKLYIYLFIFQFSI 712 (722)
Q Consensus 699 ~ey~~~G~L~~~l~ 712 (722)
+||.+.|+++..++
T Consensus 101 lEya~~gel~k~L~ 114 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQ 114 (281)
T ss_pred EEecCCchHHHHHH
Confidence 99999999988877
No 53
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=8.9e-12 Score=128.29 Aligned_cols=207 Identities=20% Similarity=0.236 Sum_probs=95.1
Q ss_pred CCCCCCEEECCCCCCccCCC-ccccCCCCCCEEeccCCcCCCCCC--ccCCCCCCCcEEEcccCCCCCCCchh-hcCcCC
Q 004953 104 RLSYLTILDFMWNKISGSIP-KEIGNIKSLELLLLNGNELTGSLP--EELGYLPKLDRIQIDQNYISGSLPKS-FANLNK 179 (722)
Q Consensus 104 ~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~ 179 (722)
++.+|+...|.+..+....- .....+++++.|||+.|-+....| .....+|+|+.|+|+.|++..-.... -..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 34455555555544431111 133445555555555555443211 12234555555555555543211111 113445
Q ss_pred CCEEECCCccccCCC-CcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEc
Q 004953 180 TRHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 258 (722)
Q Consensus 180 L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L 258 (722)
|+.|.|+.|.++... ...+..+++|+.|+|..|...........-+..|++|+|++|++-....-...+.++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 555555555554221 1122344555555555553222222233344555555665555543222234455555556666
Q ss_pred cCCCCccCC-CC------CCCCCCccEEEccCCCCCccCCC---ccccCCcCEEEccCCcCcc
Q 004953 259 RNCSLQGPM-PD------LSRIPNLGYLDLSSNQLNGSIPP---GRLSLNITTIKLSNNKLTG 311 (722)
Q Consensus 259 ~~N~l~~~~-~~------l~~l~~L~~L~Ls~N~l~~~ip~---~~~~~~L~~L~L~~N~l~~ 311 (722)
+.+.+.... |+ ...+++|++|++..|++. ..+. .....+|+.|.+..|.++.
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhcccccccc
Confidence 555555321 11 234566666666666664 2222 1223466666666666663
No 54
>PHA02988 hypothetical protein; Provisional
Probab=99.13 E-value=2.6e-10 Score=118.91 Aligned_cols=97 Identities=16% Similarity=0.215 Sum_probs=78.0
Q ss_pred cccccHHHHHHhhcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhc---HHHHHHHHHHHHhcCCCcccceEE
Q 004953 611 VRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVG 687 (722)
Q Consensus 611 ~~~~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~---~~~f~~E~~~l~~l~H~Niv~l~g 687 (722)
.+.++++++. ......||+|++|.||+|.+ +|+.||||+++...... .+.|.+|+.+|.+++|||||+++|
T Consensus 12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 4455666652 33346899999999999998 78999999997543322 356889999999999999999999
Q ss_pred EEEe----CCeEEEEecccccCcHHHHHHH
Q 004953 688 YCDE----EGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 688 ~~~~----~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
++.+ ....++||||+++|+|.+++++
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 115 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDK 115 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhh
Confidence 9977 3468899999999999888754
No 55
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.11 E-value=7.1e-12 Score=121.96 Aligned_cols=90 Identities=29% Similarity=0.425 Sum_probs=73.7
Q ss_pred ccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEE-EEEeCCe-EEEEec
Q 004953 626 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVG-YCDEEGE-QVLPLK 700 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g-~~~~~~~-~~Lv~e 700 (722)
|...+.||+|+||+|||+. +.+|..||.|.++-+ ..+...+...|+.+|++++|||||+.++ .+.++.+ ..||||
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE 100 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME 100 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence 5556789999999999997 678999999998743 2344557999999999999999999998 4445555 799999
Q ss_pred ccccCcHHHHHHHHH
Q 004953 701 LYIYLFIFQFSIKLI 715 (722)
Q Consensus 701 y~~~G~L~~~l~~~~ 715 (722)
|+..|||.+.+++..
T Consensus 101 ~c~~GDLsqmIk~~K 115 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFK 115 (375)
T ss_pred hhcccCHHHHHHHHH
Confidence 999999977766543
No 56
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.10 E-value=1.5e-10 Score=126.36 Aligned_cols=95 Identities=21% Similarity=0.390 Sum_probs=79.5
Q ss_pred HHhhcCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChh-cHHHHHHHHHHHHhcC-CCcccceEEEEEe
Q 004953 620 ALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 691 (722)
Q Consensus 620 ~~~t~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~ 691 (722)
....+++...+.||+|+||.||+|.+. .+..||||+++..... ..+.|.+|+++|.++. |||||+++|+|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 334455777789999999999999863 2468999999754322 2346999999999997 9999999999999
Q ss_pred CCeEEEEecccccCcHHHHHHHH
Q 004953 692 EGEQVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 692 ~~~~~Lv~ey~~~G~L~~~l~~~ 714 (722)
.+..++|+||+++|+|.+++++.
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~ 135 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRN 135 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhc
Confidence 99999999999999999999875
No 57
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.10 E-value=3.2e-10 Score=119.49 Aligned_cols=90 Identities=24% Similarity=0.371 Sum_probs=75.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-----------------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccce
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSL 685 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-----------------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l 685 (722)
++|...+.||+|+||.||++..++ +..||||.++... .....+|.+|++++.+++|||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 356667899999999999997532 3479999987643 2334579999999999999999999
Q ss_pred EEEEEeCCeEEEEecccccCcHHHHHHH
Q 004953 686 VGYCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 686 ~g~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
+|++...+..++||||+++|+|.+++.+
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSS 112 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHh
Confidence 9999999999999999999999887643
No 58
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.10 E-value=3e-10 Score=115.50 Aligned_cols=86 Identities=21% Similarity=0.213 Sum_probs=75.0
Q ss_pred CCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-eEEEEeccccc
Q 004953 628 SSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQVLPLKLYIY 704 (722)
Q Consensus 628 ~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-~~~Lv~ey~~~ 704 (722)
..+.||+|..|+|||+.. ++++.+|.|.+.... ..-+++..+|++++.+.+||+||+++|.|...+ +..++||||.+
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 357899999999999996 468899999995432 344578999999999999999999999999988 59999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 163 GSLd~~~k~ 171 (364)
T KOG0581|consen 163 GSLDDILKR 171 (364)
T ss_pred CCHHHHHhh
Confidence 999988874
No 59
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.09 E-value=7.1e-11 Score=124.95 Aligned_cols=89 Identities=22% Similarity=0.361 Sum_probs=76.1
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
++|...+.||+|+||.||||+-+ +.+.||+|.+....+ ++.+...+|++++++++|||||.++.+|.+..+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 35666778999999999999854 578999999965432 334678999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+.+ +|+.++.+
T Consensus 82 ~a~g-~L~~il~~ 93 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ 93 (808)
T ss_pred hhhh-hHHHHHHh
Confidence 9998 99888765
No 60
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.09 E-value=1.5e-10 Score=123.94 Aligned_cols=93 Identities=24% Similarity=0.429 Sum_probs=76.7
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe------CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l------~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
+.++|...+.||+|+||.||+|.. .++..||||+++.... ...+.|.+|++++.++ +|||||+++|+|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 345677789999999999999974 2356899999975432 2345799999999999 8999999999987644
Q ss_pred -eEEEEecccccCcHHHHHHHH
Q 004953 694 -EQVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 694 -~~~Lv~ey~~~G~L~~~l~~~ 714 (722)
..++||||+++|+|.+++++.
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~ 106 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAK 106 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhc
Confidence 588999999999999999864
No 61
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.08 E-value=2.4e-10 Score=120.94 Aligned_cols=92 Identities=15% Similarity=0.192 Sum_probs=77.9
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh---cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
..++|+...+||+|+||.||.+.-+ .|..+|+|+++..... +.+-..+|-.+|...++|.||+|+..+.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 3467888999999999999999864 5999999999765332 23457889999999999999999999999999999
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
||||+||||+-..|.+
T Consensus 219 iMEylPGGD~mTLL~~ 234 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR 234 (550)
T ss_pred EEEecCCccHHHHHHh
Confidence 9999999999554433
No 62
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.08 E-value=2.1e-10 Score=116.49 Aligned_cols=91 Identities=22% Similarity=0.303 Sum_probs=79.2
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.++|+..++||+|+||+||.... +.++.+|+|+++.... .+.+...+|..+|.+++||.||++...+.+++..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 45688899999999999999985 4589999999965422 2345688999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+.||+|+-.+.+
T Consensus 104 ld~~~GGeLf~hL~~ 118 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR 118 (357)
T ss_pred EeccCCccHHHHHHh
Confidence 999999999888875
No 63
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.08 E-value=3.4e-10 Score=123.40 Aligned_cols=89 Identities=13% Similarity=0.139 Sum_probs=76.3
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
.|...+.||+|+||+||+|.. .++..||||++.... ....+.+.+|++++.+++|+|||++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 466778999999999999985 458899999996432 2223568999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~gg~L~~~l~~ 94 (381)
T cd05626 82 YIPGGDMMSLLIR 94 (381)
T ss_pred cCCCCcHHHHHHh
Confidence 9999999888654
No 64
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.07 E-value=4e-10 Score=115.51 Aligned_cols=88 Identities=23% Similarity=0.417 Sum_probs=77.1
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+|+..+.||+|+||.||++.+.++..+|+|.+.... ...++|.+|++++.+++||||++++++|...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 466678899999999999998888899999986432 2346799999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 84 ~~L~~~~~~ 92 (256)
T cd05114 84 GCLLNYLRQ 92 (256)
T ss_pred CcHHHHHHh
Confidence 999888754
No 65
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.06 E-value=6.5e-10 Score=118.78 Aligned_cols=90 Identities=20% Similarity=0.214 Sum_probs=78.1
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
++|+..+.||+|+||.||++... ++..+|+|.++.... .....|.+|++++.+++|+|||+++++|.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 56888899999999999999865 578899998865422 2335699999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++++
T Consensus 85 ~~~~~L~~~l~~ 96 (333)
T cd06650 85 MDGGSLDQVLKK 96 (333)
T ss_pred CCCCcHHHHHHH
Confidence 999999988754
No 66
>PLN03150 hypothetical protein; Provisional
Probab=99.06 E-value=2.8e-10 Score=130.65 Aligned_cols=108 Identities=27% Similarity=0.449 Sum_probs=77.7
Q ss_pred CCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeeccc
Q 004953 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (722)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 211 (722)
++.|+|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|..++++++|++|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 66677777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCCCCCccCCCC-CCCcEEECcCCCCC
Q 004953 212 NNLTGYLPPELSEL-PKLLILQLDNNNFE 239 (722)
Q Consensus 212 N~l~~~~~~~l~~l-~~L~~L~l~~N~l~ 239 (722)
|++++.+|..+... .++..+++.+|...
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccc
Confidence 77777777766543 35667777777543
No 67
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.06 E-value=4e-10 Score=122.03 Aligned_cols=89 Identities=19% Similarity=0.212 Sum_probs=76.2
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||+||++... +|+.||||++.... ......+.+|++++.+++|+|||++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 5777889999999999999864 58999999986421 1223458899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~~g~L~~~l~~ 94 (364)
T cd05599 82 YLPGGDMMTLLMK 94 (364)
T ss_pred CCCCcHHHHHHHH
Confidence 9999999887654
No 68
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.06 E-value=3.4e-10 Score=117.39 Aligned_cols=83 Identities=19% Similarity=0.219 Sum_probs=70.2
Q ss_pred eeecCCCeeEEEEEeCC-------------------------CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccce
Q 004953 631 QIGQGGYGKVYKGILPD-------------------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l~~-------------------------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l 685 (722)
.||+|+||.||+|.+.. ...||||.++........+|.+|++++++++|||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999998521 13589999875544445679999999999999999999
Q ss_pred EEEEEeCCeEEEEecccccCcHHHHHHH
Q 004953 686 VGYCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 686 ~g~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
+|+|.+.+..++||||+++|+|.+++++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 109 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK 109 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence 9999999999999999999999877654
No 69
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=3.5e-11 Score=117.96 Aligned_cols=130 Identities=22% Similarity=0.298 Sum_probs=66.2
Q ss_pred CCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEE
Q 004953 201 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLD 280 (722)
Q Consensus 201 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~ 280 (722)
.+.|+++||++|.|+ .+.++..-.|.++.|++++|.+.. -..+..+++|+.|||++|.++.....-.++-+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~---v~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT---VQNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee---ehhhhhcccceEeecccchhHhhhhhHhhhcCEeeee
Confidence 345566666666655 334445555666666666666542 2335555556666666665553332222344555555
Q ss_pred ccCCCCCccCCCccccCCcCEEEccCCcCccc-CCccCCCCCCCCEEeCCCCcCcc
Q 004953 281 LSSNQLNGSIPPGRLSLNITTIKLSNNKLTGT-IPSNFSGLPRLQRLFIANNSLSG 335 (722)
Q Consensus 281 Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~ 335 (722)
|+.|.|. .+......-+|..||+++|+|... --..++++|-|+.+.|.+|.+.+
T Consensus 359 La~N~iE-~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 359 LAQNKIE-TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhhHh-hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 5555554 222111112555555555555431 12345666666666666666653
No 70
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.05 E-value=1.7e-10 Score=124.76 Aligned_cols=85 Identities=26% Similarity=0.368 Sum_probs=72.7
Q ss_pred CCCeeecCCCeeEEEEEeC--CCc--EEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 628 SSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 628 ~~~~iG~G~fG~Vy~g~l~--~g~--~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
..++||+|.||.|++|.|. .|+ .||||.++..... ...+|.+|+.+|.+++|||+|+|+|.+.+ ...++|+|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 3468999999999999984 354 5899999876543 44689999999999999999999999987 7788999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
+.|+|.+.|++
T Consensus 193 plGSLldrLrk 203 (1039)
T KOG0199|consen 193 PLGSLLDRLRK 203 (1039)
T ss_pred ccchHHHHHhh
Confidence 99999777666
No 71
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.04 E-value=3.2e-10 Score=123.13 Aligned_cols=94 Identities=26% Similarity=0.449 Sum_probs=79.3
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe------CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l------~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
..++|+..+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|++++.++ +|+|||+++|+|...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 345688889999999999999874 2245899999975433 2345688999999999 8999999999999999
Q ss_pred eEEEEecccccCcHHHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~~~ 715 (722)
..++||||+++|+|.+++++..
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~ 137 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKA 137 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhh
Confidence 9999999999999999998754
No 72
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.04 E-value=2.5e-10 Score=117.25 Aligned_cols=92 Identities=25% Similarity=0.440 Sum_probs=81.5
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+..+|+..+.||+|+||.||+|...++..+|+|.+.........++.+|+.++.+++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34567778899999999999999888999999999766554556799999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++++
T Consensus 84 ~~~~~L~~~~~~ 95 (261)
T cd05148 84 MEKGSLLAFLRS 95 (261)
T ss_pred cccCCHHHHHhc
Confidence 999999988764
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.04 E-value=5.7e-10 Score=121.45 Aligned_cols=89 Identities=19% Similarity=0.176 Sum_probs=75.7
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|...+.||+|+||+||++.. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 577778999999999999985 468899999985421 1223568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~gg~L~~~l~~ 94 (377)
T cd05629 82 FLPGGDLMTMLIK 94 (377)
T ss_pred CCCCCcHHHHHHh
Confidence 9999999887643
No 74
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.04 E-value=8.6e-10 Score=117.79 Aligned_cols=90 Identities=19% Similarity=0.180 Sum_probs=77.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
++|+..+.||+|+||.||++... +|..||+|.++.... ...+.|.+|++++.+++|||||++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 56778889999999999999964 588999999865422 2345799999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++.+
T Consensus 85 ~~~~~L~~~l~~ 96 (331)
T cd06649 85 MDGGSLDQVLKE 96 (331)
T ss_pred CCCCcHHHHHHH
Confidence 999999888754
No 75
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.04 E-value=6.9e-10 Score=118.61 Aligned_cols=89 Identities=27% Similarity=0.338 Sum_probs=76.4
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++.+++|||||++++++..++..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5677789999999999999975 58899999986432 1234568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~g~~L~~~l~~ 94 (333)
T cd05600 82 YVPGGDFRTLLNN 94 (333)
T ss_pred CCCCCCHHHHHHH
Confidence 9999999888643
No 76
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.04 E-value=6.7e-10 Score=118.52 Aligned_cols=90 Identities=19% Similarity=0.292 Sum_probs=76.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|...+.||+|+||.||+|... +|+.||||.++... ....+.+.+|+.++.+++|||||++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 45777789999999999999974 58899999986421 123356899999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++++
T Consensus 98 e~~~~~~L~~~l~~ 111 (329)
T PTZ00263 98 EFVVGGELFTHLRK 111 (329)
T ss_pred cCCCCChHHHHHHH
Confidence 99999999887754
No 77
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.03 E-value=6.3e-10 Score=121.32 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=76.1
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
.|...+.||+|+||+||+|.. .+++.||||.+.... ....+.+.+|++++.+++|+|||++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 467778999999999999985 468899999986432 1223568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
||++|+|.+++.+
T Consensus 82 ~~~gg~L~~~l~~ 94 (382)
T cd05625 82 YIPGGDMMSLLIR 94 (382)
T ss_pred CCCCCcHHHHHHh
Confidence 9999999888754
No 78
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.03 E-value=1.1e-09 Score=115.72 Aligned_cols=89 Identities=19% Similarity=0.183 Sum_probs=76.9
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|+||.||++... ++..+|+|.++.... ...+++.+|++++.+++||||++++++|..++..++|+||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 5777889999999999999864 578899998865422 23356899999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 82 ~~~~L~~~l~~ 92 (308)
T cd06615 82 DGGSLDQVLKK 92 (308)
T ss_pred CCCcHHHHHHh
Confidence 99999888754
No 79
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.03 E-value=7.1e-10 Score=118.80 Aligned_cols=90 Identities=24% Similarity=0.342 Sum_probs=75.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC--CcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~--g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++|+..+.||+|+||.||+|.... +..||||++.... ....+.+.+|++++..++|||||++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 347777899999999999998643 3689999985321 22335688999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++++
T Consensus 110 ~Ey~~~g~L~~~i~~ 124 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR 124 (340)
T ss_pred EeCCCCCcHHHHHHH
Confidence 999999999888754
No 80
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.03 E-value=4.3e-10 Score=117.78 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=76.2
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||++... +|+.||||++.... ....+.+.+|++++.+++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 5677789999999999999964 58899999986432 1234568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++++
T Consensus 82 ~~~~~~L~~~~~~ 94 (291)
T cd05612 82 YVPGGELFSYLRN 94 (291)
T ss_pred CCCCCCHHHHHHH
Confidence 9999999888654
No 81
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.02 E-value=7.2e-10 Score=119.50 Aligned_cols=83 Identities=25% Similarity=0.298 Sum_probs=70.9
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|+..+.||+|+||+||+|+.. +|+.||||.+..... ...+.|.+|++++.+++|+|||++++++...+..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 334578999999999999864 689999999864332 234579999999999999999999999999999999999999
Q ss_pred cCcHH
Q 004953 704 YLFIF 708 (722)
Q Consensus 704 ~G~L~ 708 (722)
+|+|.
T Consensus 156 ~~~L~ 160 (353)
T PLN00034 156 GGSLE 160 (353)
T ss_pred CCccc
Confidence 99884
No 82
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=7e-11 Score=115.84 Aligned_cols=132 Identities=22% Similarity=0.265 Sum_probs=92.6
Q ss_pred ccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccCCccCCCCCCCCEE
Q 004953 247 YSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRL 326 (722)
Q Consensus 247 ~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 326 (722)
+.....|+++||++|.|+.....+.-+|.++.|++|+|.|. .+....+.++|+.|||++|.++ .+..+-..+-+.+.|
T Consensus 280 ~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR-TVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred cchHhhhhhccccccchhhhhhhhhhccceeEEecccccee-eehhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 33455677777777777766666666777777888887777 5544445567888888888777 334455667788888
Q ss_pred eCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCC--CCC-CCCCceEEEccCCcCcCC
Q 004953 327 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS--GSF-NIPPNVTVRLRGNPFCLN 387 (722)
Q Consensus 327 ~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~--~~~-~~~~l~~l~l~~N~l~~~ 387 (722)
.|++|.|. .+..+.. +.+|..||+++|+|..+. ..+ .+|-+..+.|.+||+.+.
T Consensus 358 ~La~N~iE-----~LSGL~K--LYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 358 KLAQNKIE-----TLSGLRK--LYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred ehhhhhHh-----hhhhhHh--hhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 88888775 3333332 356788888888888764 345 788888999999998754
No 83
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.02 E-value=7.4e-10 Score=115.75 Aligned_cols=92 Identities=23% Similarity=0.347 Sum_probs=77.9
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~ 694 (722)
.+++|+..+.||+|+||.||+|..+ .+..||||.++.... .....|.+|+.++.+++|+||+++++++.+.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888899999999999999753 245899999865432 233468899999999999999999999999999
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++||||+++|+|.+++++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~ 102 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRS 102 (288)
T ss_pred cEEEEeCCCCCCHHHHHHH
Confidence 9999999999999999875
No 84
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.02 E-value=2.8e-10 Score=121.88 Aligned_cols=92 Identities=21% Similarity=0.313 Sum_probs=77.4
Q ss_pred HHHHHhhcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChh--cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 004953 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 617 ~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~--~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~ 694 (722)
++|+...+.+.....||+|+||+||||.|. ..||||+++..... ..++|..||.++++-||.||+=+.|||..++.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 455555566667789999999999999984 36999999765443 34679999999999999999999999998887
Q ss_pred EEEEecccccCcHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l 711 (722)
+||.-++++-+|..++
T Consensus 463 -AIiTqwCeGsSLY~hl 478 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHL 478 (678)
T ss_pred -eeeehhccCchhhhhc
Confidence 9999999999996653
No 85
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.02 E-value=1.4e-09 Score=112.14 Aligned_cols=89 Identities=19% Similarity=0.201 Sum_probs=77.5
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+|+..+.||+|+||.||+|+. .++..||+|++........+.+.+|+.++.+++||||+++++++..++..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 3577788999999999999996 568899999987544444456889999999999999999999999999999999999
Q ss_pred ccCcHHHHHH
Q 004953 703 IYLFIFQFSI 712 (722)
Q Consensus 703 ~~G~L~~~l~ 712 (722)
++|+|.+++.
T Consensus 89 ~~~~L~~~~~ 98 (267)
T cd06646 89 GGGSLQDIYH 98 (267)
T ss_pred CCCcHHHHHH
Confidence 9999988764
No 86
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.02 E-value=8.1e-10 Score=118.35 Aligned_cols=91 Identities=23% Similarity=0.344 Sum_probs=79.0
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChh---cHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv 698 (722)
..|...+.||+|.||.||+++-+. |+.+|+|.+...... +...+.+|+.+|.++. |||||++.+.+.+....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 456667899999999999999654 999999999654332 3357899999999998 99999999999999999999
Q ss_pred ecccccCcHHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIKL 714 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~~ 714 (722)
||++.+|+|++++.+.
T Consensus 115 mEL~~GGeLfd~i~~~ 130 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK 130 (382)
T ss_pred EEecCCchHHHHHHHc
Confidence 9999999999988763
No 87
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=4.4e-11 Score=123.26 Aligned_cols=90 Identities=18% Similarity=0.226 Sum_probs=47.7
Q ss_pred CcCEEEccCCcCcccC-CccCCCCCCCCEEeCCCCcCcc-cCChhhhhhccCCCCcccEEEccCCcCCCCC--CCC-CCC
Q 004953 298 NITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNIS--GSF-NIP 372 (722)
Q Consensus 298 ~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~-~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~--~~~-~~~ 372 (722)
.|+.|||++|++-... -...+.++.|+.|+++.+.++. .+|+.=...++-..++|++|++..|++..++ .++ .++
T Consensus 247 ~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~ 326 (505)
T KOG3207|consen 247 TLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLE 326 (505)
T ss_pred HHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccc
Confidence 3444444444443211 0234556666666666666653 1222211122224467777777777776654 233 567
Q ss_pred CceEEEccCCcCcCC
Q 004953 373 PNVTVRLRGNPFCLN 387 (722)
Q Consensus 373 ~l~~l~l~~N~l~~~ 387 (722)
++..|.+..|+++-.
T Consensus 327 nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 327 NLKHLRITLNYLNKE 341 (505)
T ss_pred hhhhhhccccccccc
Confidence 777777777777543
No 88
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=9.8e-10 Score=113.76 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=79.4
Q ss_pred hcCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhc-HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~-~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
.+.|+...+||.|..++||+|. .+.+..||||++.-..... .++..+|+..|+.++|||||+.+..+..+.+.|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3567778899999999999998 5778999999997554333 3678999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
||.+|++++.++.
T Consensus 105 fMa~GS~ldIik~ 117 (516)
T KOG0582|consen 105 FMAGGSLLDIIKT 117 (516)
T ss_pred hhcCCcHHHHHHH
Confidence 9999999887655
No 89
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.01 E-value=9.9e-10 Score=112.86 Aligned_cols=89 Identities=24% Similarity=0.400 Sum_probs=78.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
++|+..+.||+|+||.||+|...++..||+|.+..... ..+.|.+|+.++.+++|+||+++++++...+..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 45777789999999999999988888999999865432 34679999999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 85 ~~~L~~~l~~ 94 (261)
T cd05072 85 KGSLLDFLKS 94 (261)
T ss_pred CCcHHHHHHH
Confidence 9999888754
No 90
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.01 E-value=8e-10 Score=115.11 Aligned_cols=98 Identities=26% Similarity=0.370 Sum_probs=79.8
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh--------------hcHHHHHHHHHHHHhcCCCcccceEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--------------QGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~--------------~~~~~f~~E~~~l~~l~H~Niv~l~g~ 688 (722)
+.|.....||+|.||.|-.|.- .+++.||||.+..... ...+...+|+.+|++++|||||+|+.+
T Consensus 97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv 176 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV 176 (576)
T ss_pred hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence 5677788999999999999984 5789999999854211 012468899999999999999999998
Q ss_pred EEe--CCeEEEEecccccCcH---------------HHHHHHHHhhhccC
Q 004953 689 CDE--EGEQVLPLKLYIYLFI---------------FQFSIKLIFAIAMF 721 (722)
Q Consensus 689 ~~~--~~~~~Lv~ey~~~G~L---------------~~~l~~~~~~~a~~ 721 (722)
..+ .+..|||+|||..|.+ +.|++.++.|+.++
T Consensus 177 LDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYL 226 (576)
T KOG0585|consen 177 LDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYL 226 (576)
T ss_pred ecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 876 4578999999999976 66788888887664
No 91
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.01 E-value=7.3e-10 Score=113.87 Aligned_cols=90 Identities=27% Similarity=0.490 Sum_probs=79.4
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+++|+..+.||+|+||.||+|...+++.||||.++... ...++|.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45577789999999999999998778899999987543 23567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++++
T Consensus 84 ~~~~L~~~~~~ 94 (261)
T cd05068 84 KYGSLLEYLQG 94 (261)
T ss_pred cCCcHHHHHhc
Confidence 99999988754
No 92
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=1.9e-10 Score=108.68 Aligned_cols=110 Identities=30% Similarity=0.358 Sum_probs=30.6
Q ss_pred ccCCCCCCEEECCCCCCccCCCcccc-CCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCC
Q 004953 102 IGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKT 180 (722)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 180 (722)
+.+..++++|+|.+|.|+.+ +.++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+...+.....+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 34445677788888877743 2344 467778888888887743 346677777778887777775433222457777
Q ss_pred CEEECCCccccCCCC-cCCCCCCccceeecccCCCC
Q 004953 181 RHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLT 215 (722)
Q Consensus 181 ~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 215 (722)
++|++++|+|..... ..+..+++|+.|++.+|.++
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777777777753211 22334444444444444443
No 93
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.01 E-value=1.2e-09 Score=112.78 Aligned_cols=84 Identities=27% Similarity=0.362 Sum_probs=71.4
Q ss_pred CeeecCCCeeEEEEEeCC---CcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 630 TQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~---g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
+.||+|+||.||+|...+ +..+|+|.++.... .....|.+|+.++++++|||||+++|++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 35799999865432 33457999999999999999999999999989999999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
+|.+++++
T Consensus 81 ~L~~~l~~ 88 (269)
T cd05087 81 DLKGYLRS 88 (269)
T ss_pred cHHHHHHH
Confidence 99988764
No 94
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.00 E-value=1.5e-09 Score=110.67 Aligned_cols=84 Identities=33% Similarity=0.511 Sum_probs=73.7
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHH
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
++||+|+||.||+|..+++..||+|.++..... ....|.+|++++.+++||||++++++|...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888899999998754332 2346999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 004953 709 QFSIK 713 (722)
Q Consensus 709 ~~l~~ 713 (722)
+++++
T Consensus 81 ~~~~~ 85 (250)
T cd05085 81 SFLRK 85 (250)
T ss_pred HHHHh
Confidence 88754
No 95
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.00 E-value=1.4e-09 Score=113.27 Aligned_cols=90 Identities=28% Similarity=0.421 Sum_probs=76.2
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-----CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQV 696 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-----~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~ 696 (722)
.+|...+.||+|+||.||++..+ ++..||||++........+.|.+|++++.+++|||||++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 35666789999999999999853 4789999999766555567899999999999999999999988653 4688
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+|+||+++|+|.+++.+
T Consensus 84 lv~e~~~~~~L~~~l~~ 100 (284)
T cd05081 84 LVMEYLPYGSLRDYLQK 100 (284)
T ss_pred EEEEecCCCCHHHHHHh
Confidence 99999999999988754
No 96
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.00 E-value=1.6e-09 Score=111.67 Aligned_cols=90 Identities=23% Similarity=0.333 Sum_probs=77.1
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC----CcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~----g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++|+..+.||+|+||.||+|.+.. ...||||.++.... ....+|.+|+.++.+++|+||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 467788999999999999999742 45799999875432 3345799999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++.+
T Consensus 84 ~e~~~~~~L~~~~~~ 98 (266)
T cd05033 84 TEYMENGSLDKFLRE 98 (266)
T ss_pred EEcCCCCCHHHHHHh
Confidence 999999999888754
No 97
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.99 E-value=2.1e-09 Score=110.64 Aligned_cols=88 Identities=23% Similarity=0.428 Sum_probs=75.9
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCCh------hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
|...+.||+|+||+||+|...+|..+|||.++.... ...+.+.+|++++++++|+||++++++|.+.+..++|+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 556789999999999999988899999998864321 11245889999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++++
T Consensus 82 e~~~~~~L~~~l~~ 95 (265)
T cd06631 82 EFVPGGSISSILNR 95 (265)
T ss_pred ecCCCCcHHHHHHh
Confidence 99999999888755
No 98
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.99 E-value=1.3e-09 Score=118.66 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=75.8
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|...+.||+|+||.||++.. .+++.||||.+.... ....+.+.+|++++.+++|+|||++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 577788999999999999985 458899999985421 1223468899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++++
T Consensus 82 ~~~~g~L~~~i~~ 94 (376)
T cd05598 82 YIPGGDMMSLLIR 94 (376)
T ss_pred CCCCCcHHHHHHh
Confidence 9999999887654
No 99
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.99 E-value=1.4e-09 Score=113.52 Aligned_cols=88 Identities=23% Similarity=0.312 Sum_probs=74.6
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|+..+.||+|+||.||++.. .+|+.||||.+..... .....+.+|++++.+++|+||+++.+++.+++..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 55678899999999999985 5689999999864321 2234688999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++.+
T Consensus 82 ~~~g~L~~~~~~ 93 (285)
T cd05631 82 MNGGDLKFHIYN 93 (285)
T ss_pred cCCCcHHHHHHh
Confidence 999999877643
No 100
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.99 E-value=1.3e-09 Score=118.11 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=76.4
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|+..+.||+|+||+||++.. .+++.||||+++... ......+.+|+.++.+++|+|||++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3577788999999999999985 458899999986432 122346888999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++.+
T Consensus 81 E~~~gg~L~~~l~~ 94 (363)
T cd05628 81 EFLPGGDMMTLLMK 94 (363)
T ss_pred cCCCCCcHHHHHHh
Confidence 99999999888754
No 101
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.99 E-value=1.5e-10 Score=109.52 Aligned_cols=60 Identities=32% Similarity=0.486 Sum_probs=9.4
Q ss_pred CCCCCCEEeccCCcCCCCCCccCC-CCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCcccc
Q 004953 128 NIKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS 191 (722)
Q Consensus 128 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (722)
+..++++|+|.+|.|+.+ +.++ .+.+|+.|+|++|.|+.. +.+..++.|+.|++++|+|+
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC
Confidence 344455555555555522 2233 345555555555555432 12444444455555554444
No 102
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.99 E-value=2.5e-11 Score=121.88 Aligned_cols=87 Identities=22% Similarity=0.253 Sum_probs=46.8
Q ss_pred CCccceeecccCCCCCCC----CccCCCCCCCcEEECcCCCCCCCC---cchhccCCCCCcEEEccCCCCccCC-----C
Q 004953 201 LPSLVHMLLDNNNLTGYL----PPELSELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQGPM-----P 268 (722)
Q Consensus 201 l~~L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~l~~N~l~~~~---~~~~~~~l~~L~~L~L~~N~l~~~~-----~ 268 (722)
-++|+.+...+|++.... ...|...+.|+.+.+..|.|.... +...+..+++|+.|||++|-++... .
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 345666666666655321 223445566666666666653211 1234556666666666666665321 1
Q ss_pred CCCCCCCccEEEccCCCCC
Q 004953 269 DLSRIPNLGYLDLSSNQLN 287 (722)
Q Consensus 269 ~l~~l~~L~~L~Ls~N~l~ 287 (722)
.++.+++|+.|++++|.++
T Consensus 236 aL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred Hhcccchheeecccccccc
Confidence 2455556666666666555
No 103
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.98 E-value=1.6e-09 Score=115.25 Aligned_cols=84 Identities=18% Similarity=0.127 Sum_probs=71.2
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
+.||+|+||.||++.. .+|..||+|+++... ......+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 223346788999999999999999999999999999999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
+|.+++.+
T Consensus 81 ~L~~~l~~ 88 (323)
T cd05595 81 ELFFHLSR 88 (323)
T ss_pred cHHHHHHH
Confidence 99776543
No 104
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.98 E-value=9e-10 Score=108.40 Aligned_cols=90 Identities=19% Similarity=0.245 Sum_probs=77.6
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.+|.|+||+|...+.+ .|..+|+|+++.... ++.+...+|-.+|..+.||.+|+|.+.|.+.+..++|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 4666789999999999999864 588999999965432 223447789999999999999999999999999999999
Q ss_pred ccccCcHHHHHHHH
Q 004953 701 LYIYLFIFQFSIKL 714 (722)
Q Consensus 701 y~~~G~L~~~l~~~ 714 (722)
|+++|+|+.|+|+.
T Consensus 125 yv~GGElFS~Lrk~ 138 (355)
T KOG0616|consen 125 YVPGGELFSYLRKS 138 (355)
T ss_pred ccCCccHHHHHHhc
Confidence 99999999999983
No 105
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.98 E-value=1.1e-09 Score=113.63 Aligned_cols=92 Identities=25% Similarity=0.422 Sum_probs=78.0
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~ 694 (722)
.+++|+..+.||+|+||.||+|... .+..||||++.... .....+|.+|+.++.+++|+|||++++++...+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888899999999999998753 24679999986432 2334579999999999999999999999999999
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++||||+++|+|.+++++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~ 102 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRS 102 (277)
T ss_pred eEEEEecCCCCCHHHHHHH
Confidence 9999999999999998765
No 106
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.98 E-value=1.2e-09 Score=113.44 Aligned_cols=90 Identities=24% Similarity=0.429 Sum_probs=77.3
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC------CcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~------g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
++|...+.||+|+||.||+|...+ +..||||.++..... ..+.|.+|++++.+++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 346667889999999999998633 478999998765443 3468999999999999999999999999999999
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+||||+++|+|.+++++
T Consensus 85 lv~e~~~~~~L~~~i~~ 101 (280)
T cd05049 85 MVFEYMEHGDLNKFLRS 101 (280)
T ss_pred EEEecCCCCCHHHHHHh
Confidence 99999999999998864
No 107
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.98 E-value=2.6e-10 Score=116.00 Aligned_cols=88 Identities=19% Similarity=0.388 Sum_probs=75.3
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHH---HHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~---~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|+..+.+|+|.||+|-++.- ..|+.||||.++....+++. ...+|+++|+.++||||++++..+...+...|||||
T Consensus 55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY 134 (668)
T KOG0611|consen 55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY 134 (668)
T ss_pred HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence 44456799999999999984 56999999999765444433 478999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
..+|+|.||+-+
T Consensus 135 aS~GeLYDYiSe 146 (668)
T KOG0611|consen 135 ASGGELYDYISE 146 (668)
T ss_pred cCCccHHHHHHH
Confidence 999999998644
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.98 E-value=1.5e-09 Score=113.31 Aligned_cols=88 Identities=25% Similarity=0.322 Sum_probs=74.5
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|+..+.||+|+||+||++.. .+++.||||++..... .....+.+|++++.+++|+|||++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 55678899999999999985 4688999999864322 2234578999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++++
T Consensus 82 ~~~~~L~~~~~~ 93 (285)
T cd05605 82 MNGGDLKFHIYN 93 (285)
T ss_pred cCCCcHHHHHHh
Confidence 999999877654
No 109
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.98 E-value=1.6e-09 Score=116.11 Aligned_cols=92 Identities=20% Similarity=0.302 Sum_probs=77.3
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC----Ch-hcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCe
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG----SL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE 694 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~ 694 (722)
..+.|...+.||+|+||+||.|.. .+|..||||.++.. .. ...+...+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 345677889999999999999974 56899999977553 11 12334668999999999 9999999999999999
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++||||+.+|+|++++.+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~ 113 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN 113 (370)
T ss_pred EEEEEEecCCccHHHHHHH
Confidence 9999999999999998776
No 110
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.97 E-value=1.7e-09 Score=112.59 Aligned_cols=88 Identities=27% Similarity=0.427 Sum_probs=75.3
Q ss_pred CccCCCeeecCCCeeEEEEEe-----CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-----~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
+|+..+.||+|+||.||+|.. .++..||+|.+.... .....+|.+|++++++++||||++++|++..++..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 466678899999999999984 246789999997533 23346799999999999999999999999999999999
Q ss_pred ecccccCcHHHHHH
Q 004953 699 LKLYIYLFIFQFSI 712 (722)
Q Consensus 699 ~ey~~~G~L~~~l~ 712 (722)
|||+++|+|.+++.
T Consensus 86 ~e~~~~~~L~~~l~ 99 (283)
T cd05090 86 FEYLNQGDLHEFLI 99 (283)
T ss_pred EEcCCCCcHHHHHH
Confidence 99999999999874
No 111
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.97 E-value=7.7e-11 Score=129.44 Aligned_cols=242 Identities=24% Similarity=0.265 Sum_probs=110.5
Q ss_pred CCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEE
Q 004953 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (722)
Q Consensus 105 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 184 (722)
+..++.+++..|.+.. +-..+..+++|+.|++.+|.|... ...+..+++|++|++++|.|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 3444444455555542 222244455555555555555422 212444555555555555554321 233334445555
Q ss_pred CCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCc
Q 004953 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (722)
Q Consensus 185 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 264 (722)
+++|.|+.. ..+..++.|+.+++++|+++...+ . . ...+.+++.+++..|.+.
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~-~-----------------------~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIEN-D-----------------------E-LSELISLEELDLGGNSIR 199 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhh-h-----------------------h-hhhccchHHHhccCCchh
Confidence 555544421 223334444444444444443222 0 0 234444444455544444
Q ss_pred cCCCCCCCCCCccEEEccCCCCCccCCCccccC--CcCEEEccCCcCcccCCccCCCCCCCCEEeCCCCcCcccCChhhh
Q 004953 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (722)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (722)
. +..+..+..+..+++..|.++ .+-...... .|+.+++++|.+... +..+..+..+..|++.+|++...-...
T Consensus 200 ~-i~~~~~~~~l~~~~l~~n~i~-~~~~l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~~~~~-- 274 (414)
T KOG0531|consen 200 E-IEGLDLLKKLVLLSLLDNKIS-KLEGLNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNLEGLE-- 274 (414)
T ss_pred c-ccchHHHHHHHHhhcccccce-eccCcccchhHHHHHHhcccCccccc-cccccccccccccchhhcccccccccc--
Confidence 2 111222223333355555544 222111111 255666666666522 244566667777777777766321111
Q ss_pred hhccCCCCcccEEEccCCcCCCC---C-C--CCCCCCceEEEccCCcCcCC
Q 004953 343 QSRTLNATETFILDFQNNNLTNI---S-G--SFNIPPNVTVRLRGNPFCLN 387 (722)
Q Consensus 343 ~~~~l~~~~L~~L~ls~N~l~~~---~-~--~~~~~~l~~l~l~~N~l~~~ 387 (722)
....+..+....|.+... . . ....+.+..+.+..|+....
T Consensus 275 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 275 -----RLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred -----ccchHHHhccCcchhcchhhhhccccccccccccccccccCccccc
Confidence 123445556666666531 1 1 12566777778888877543
No 112
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.97 E-value=2e-09 Score=114.52 Aligned_cols=84 Identities=19% Similarity=0.139 Sum_probs=71.6
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
+.||+|+||.||++.. .+|+.||||+++... ......+.+|++++.+++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 222346889999999999999999999999999999999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
+|.+++.+
T Consensus 81 ~L~~~l~~ 88 (323)
T cd05571 81 ELFFHLSR 88 (323)
T ss_pred cHHHHHHH
Confidence 99887644
No 113
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.97 E-value=1.9e-09 Score=115.19 Aligned_cols=89 Identities=21% Similarity=0.223 Sum_probs=76.0
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|...+.||+|+||+||++... +++.||||.+... .....+.|.+|+.++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 5677789999999999999964 5889999998632 11223458899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~g~~L~~~l~~ 94 (331)
T cd05597 82 YYVGGDLLTLLSK 94 (331)
T ss_pred cCCCCcHHHHHHH
Confidence 9999999888755
No 114
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.97 E-value=1.3e-09 Score=111.65 Aligned_cols=88 Identities=25% Similarity=0.411 Sum_probs=76.0
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+|...+.||+|+||+||.|...++..||||.+.... ....+|.+|+.++.+++||||++++|+|...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 355667899999999999998777789999987543 2346799999999999999999999999988899999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 84 ~~l~~~i~~ 92 (256)
T cd05113 84 GCLLNYLRE 92 (256)
T ss_pred CcHHHHHHh
Confidence 999887654
No 115
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.97 E-value=2.7e-09 Score=109.16 Aligned_cols=88 Identities=30% Similarity=0.431 Sum_probs=75.8
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-----hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
|...+.||+|+||+||+|... ++..||+|.+.... .+..+.|.+|++++++++|+||+++.+++..++..++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556788999999999999975 78999999885432 123457999999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++++|.+++++
T Consensus 82 e~~~~~~L~~~~~~ 95 (258)
T cd06632 82 ELVPGGSLAKLLKK 95 (258)
T ss_pred EecCCCcHHHHHHh
Confidence 99999999887654
No 116
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.97 E-value=1.2e-09 Score=118.55 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=76.7
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.++|+..+.||+|+||.||++... ++..||+|.+... .....+.|.+|+++++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 456777889999999999999864 5889999998532 112234578999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++.+
T Consensus 122 ~Ey~~gg~L~~~l~~ 136 (370)
T cd05596 122 MEYMPGGDLVNLMSN 136 (370)
T ss_pred EcCCCCCcHHHHHHh
Confidence 999999999887654
No 117
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.96 E-value=8.6e-11 Score=129.07 Aligned_cols=242 Identities=25% Similarity=0.284 Sum_probs=159.8
Q ss_pred ccceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
+..+..+++..|.+.. +-..+..+.+|+.|++.+|.|..+. ..+..+++|++|++++|.|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcc-cchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 3466777788877764 3344788899999999999998543 33778999999999999998653 367788899999
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCccccCCCC-cCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCC
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 239 (722)
+.+|.|+.. ..+..++.|+.+++++|++....+ . ...+.+++.+++.+|.+... ..+..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccce
Confidence 999999743 455668999999999999985544 2 57788899999999988733 33444555666677788775
Q ss_pred CCCcchhccCCCC--CcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCccc---CC
Q 004953 240 GTTIPASYSNMSK--LLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGT---IP 314 (722)
Q Consensus 240 ~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~---~~ 314 (722)
.. ..+..+.. |+.+++++|.+......+..+..+..|++..|++. .+........+..+.+..|.+... ..
T Consensus 222 ~~---~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (414)
T KOG0531|consen 222 KL---EGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRIS-NLEGLERLPKLSELWLNDNKLALSEAISQ 297 (414)
T ss_pred ec---cCcccchhHHHHHHhcccCccccccccccccccccccchhhcccc-ccccccccchHHHhccCcchhcchhhhhc
Confidence 31 22222333 77777777777644344555666777777777665 222222333445555555554421 11
Q ss_pred cc-CCCCCCCCEEeCCCCcCcc
Q 004953 315 SN-FSGLPRLQRLFIANNSLSG 335 (722)
Q Consensus 315 ~~-~~~l~~L~~L~L~~N~l~~ 335 (722)
.. ....+.++.+.+..|.+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 298 EYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cccccccccccccccccCcccc
Confidence 11 2334445555555554443
No 118
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.96 E-value=1.9e-09 Score=114.14 Aligned_cols=82 Identities=21% Similarity=0.194 Sum_probs=70.5
Q ss_pred eecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||+|+||.||++... ++..||+|.++.. .......+.+|++++.+++|||||++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999864 5889999998642 122345688999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 004953 708 FQFSIK 713 (722)
Q Consensus 708 ~~~l~~ 713 (722)
.+++.+
T Consensus 81 ~~~l~~ 86 (312)
T cd05585 81 FHHLQR 86 (312)
T ss_pred HHHHHh
Confidence 887754
No 119
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.96 E-value=2.3e-09 Score=110.64 Aligned_cols=90 Identities=22% Similarity=0.346 Sum_probs=75.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-C---CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~---g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++|+..+.||+|+||.||+|... + +..+|+|.++... ....+.|.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 35667789999999999999863 2 3479999986543 23345799999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++++
T Consensus 84 ~e~~~~~~L~~~~~~ 98 (267)
T cd05066 84 TEYMENGSLDAFLRK 98 (267)
T ss_pred EEcCCCCCHHHHHHh
Confidence 999999999888765
No 120
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.96 E-value=1.7e-09 Score=117.21 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=77.5
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
..++|+..+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++..++|||||++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3456888889999999999999964 5789999998532 12233458899999999999999999999999999999
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
||||+++|+|.+++.+
T Consensus 121 v~Ey~~gg~L~~~l~~ 136 (370)
T cd05621 121 VMEYMPGGDLVNLMSN 136 (370)
T ss_pred EEcCCCCCcHHHHHHh
Confidence 9999999999887654
No 121
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.96 E-value=5.8e-10 Score=113.17 Aligned_cols=83 Identities=23% Similarity=0.365 Sum_probs=64.5
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eEEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQVLP 698 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~~Lv 698 (722)
.|...+++|+|+||.||+|.+. .++.||||+.....+.. -+|+++|++++|||||+|+-++.... ..-+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 3556789999999999999974 47899999986543322 36899999999999999999887532 34689
Q ss_pred ecccccCcHHHHHH
Q 004953 699 LKLYIYLFIFQFSI 712 (722)
Q Consensus 699 ~ey~~~G~L~~~l~ 712 (722)
+||||. +|.++++
T Consensus 101 leymP~-tL~~~~r 113 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIR 113 (364)
T ss_pred HHhchH-HHHHHHH
Confidence 999985 5555444
No 122
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.95 E-value=2.5e-09 Score=114.22 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=76.0
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|...+.||+|+||+||++... +++.||+|.+.... ......|.+|+.++...+|+||+++.+++.+++..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5677789999999999999864 57899999986421 1223458899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 y~~gg~L~~~l~~ 94 (331)
T cd05624 82 YYVGGDLLTLLSK 94 (331)
T ss_pred CCCCCcHHHHHHH
Confidence 9999999998865
No 123
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.95 E-value=2.8e-09 Score=109.16 Aligned_cols=88 Identities=25% Similarity=0.375 Sum_probs=77.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
++|+..+.||+|+||.||+|.. .|+.||||.++.... ..+++.+|+.++.+++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 4567788999999999999987 478999999976543 45679999999999999999999999998999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 84 ~~~L~~~~~~ 93 (256)
T cd05039 84 KGSLVDYLRS 93 (256)
T ss_pred CCcHHHHHHh
Confidence 9999888754
No 124
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.95 E-value=2.1e-09 Score=110.31 Aligned_cols=90 Identities=27% Similarity=0.442 Sum_probs=79.1
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.++|...+.||+|+||.||+|..+++..||||.+.... ...++|.+|++++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 45677789999999999999998778899999987543 23567999999999999999999999999889999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 84 ~~~~L~~~i~~ 94 (261)
T cd05034 84 SKGSLLDFLKS 94 (261)
T ss_pred CCCCHHHHHhc
Confidence 99999888754
No 125
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.95 E-value=3.9e-09 Score=109.73 Aligned_cols=86 Identities=16% Similarity=0.213 Sum_probs=73.5
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|+||.||+|.. .++..||+|.+... .....++|.+|++++.+++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 466678899999999999985 56889999998643 2333467999999999999999999999999999999999999
Q ss_pred ccCcHHHH
Q 004953 703 IYLFIFQF 710 (722)
Q Consensus 703 ~~G~L~~~ 710 (722)
++|+|..+
T Consensus 82 ~~~~l~~~ 89 (279)
T cd06619 82 DGGSLDVY 89 (279)
T ss_pred CCCChHHh
Confidence 99988543
No 126
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.95 E-value=3.3e-09 Score=111.46 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=78.8
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+|...+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 4577778999999999999985 578999999987554444567899999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 99 ~~~~L~~~~~~ 109 (297)
T cd06656 99 AGGSLTDVVTE 109 (297)
T ss_pred CCCCHHHHHHh
Confidence 99999888654
No 127
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.95 E-value=2.1e-09 Score=114.66 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=77.1
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||+||++... +|+.||||+++... ....+.|..|+.++..++|+||+++.+++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 5777889999999999999864 68899999986432 1234568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHHH
Q 004953 701 LYIYLFIFQFSIKL 714 (722)
Q Consensus 701 y~~~G~L~~~l~~~ 714 (722)
|+++|+|.+++++.
T Consensus 82 ~~~~~~L~~~l~~~ 95 (330)
T cd05601 82 YQPGGDLLSLLNRY 95 (330)
T ss_pred CCCCCCHHHHHHHh
Confidence 99999999887653
No 128
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.94 E-value=3.1e-09 Score=113.10 Aligned_cols=84 Identities=23% Similarity=0.313 Sum_probs=70.8
Q ss_pred CeeecCCCeeEEEEEe----CCCcEEEEEEccCCC----hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 630 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l----~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+.||+|+||.||++.. ..++.||||.++... ......+.+|+++|.+++|||||++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 357899999986431 12234578999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++.+
T Consensus 82 ~~~~~L~~~~~~ 93 (323)
T cd05584 82 LSGGELFMHLER 93 (323)
T ss_pred CCCchHHHHHHH
Confidence 999999887643
No 129
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.94 E-value=2e-09 Score=111.85 Aligned_cols=90 Identities=24% Similarity=0.296 Sum_probs=78.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
++|+..+.||+|+||.||++... ++..||+|..+.......+.|.+|++++++++|+||+++++++..++..++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 45666778999999999999974 58899999987655555567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++++
T Consensus 85 ~~~~L~~~~~~ 95 (280)
T cd06611 85 DGGALDSIMLE 95 (280)
T ss_pred CCCcHHHHHHH
Confidence 99999887654
No 130
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.94 E-value=1.5e-09 Score=116.62 Aligned_cols=92 Identities=22% Similarity=0.447 Sum_probs=76.0
Q ss_pred hcCccCCCeeecCCCeeEEEEEe------CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEEEEeC-C
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE-G 693 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l------~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~-~ 693 (722)
.++|...+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+.++.++ +|+|||+++|+|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 34677889999999999999973 3467899999975432 2345688999999999 789999999998764 4
Q ss_pred eEEEEecccccCcHHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~~ 714 (722)
..++|+||+++|+|.++++..
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~ 106 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSK 106 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhc
Confidence 678999999999999999764
No 131
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.94 E-value=2.7e-09 Score=111.48 Aligned_cols=90 Identities=26% Similarity=0.414 Sum_probs=77.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
.+|...+.||+|+||+||++... ++..+|+|.+........+.|.+|++++.+++|+||++++++|...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 45777889999999999999742 345689999876555556679999999999999999999999999999999
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
||||+++|+|.++++.
T Consensus 85 v~e~~~~~~L~~~i~~ 100 (288)
T cd05093 85 VFEYMKHGDLNKFLRA 100 (288)
T ss_pred EEEcCCCCCHHHHHHH
Confidence 9999999999988764
No 132
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.94 E-value=1.9e-09 Score=111.20 Aligned_cols=89 Identities=24% Similarity=0.344 Sum_probs=73.7
Q ss_pred CccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC--eEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~--~~~Lv~ey 701 (722)
++...+.||+|+||.||.+...+ |...|||..........+...+|+++|.+++|||||+.+|...... ...+.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 35567899999999999999754 8999999986543222556899999999999999999999865544 68999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++.+
T Consensus 98 ~~~GsL~~~~~~ 109 (313)
T KOG0198|consen 98 APGGSLSDLIKR 109 (313)
T ss_pred cCCCcHHHHHHH
Confidence 999999876654
No 133
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.94 E-value=3.5e-09 Score=112.94 Aligned_cols=83 Identities=20% Similarity=0.143 Sum_probs=71.1
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
+.||+|+||.||++.. .+|..||||++.... ......+.+|++++.+++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986432 223356889999999999999999999999999999999999999
Q ss_pred cHHHHHH
Q 004953 706 FIFQFSI 712 (722)
Q Consensus 706 ~L~~~l~ 712 (722)
+|.+++.
T Consensus 81 ~L~~~l~ 87 (328)
T cd05593 81 ELFFHLS 87 (328)
T ss_pred CHHHHHH
Confidence 9977654
No 134
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.94 E-value=1.1e-09 Score=109.50 Aligned_cols=81 Identities=22% Similarity=0.295 Sum_probs=65.7
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhc--HHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~--~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~~Lv 698 (722)
++|+..+.|++|.||.||+|.- ++++.||.|+++....+. .-.-.+||.++.+++|||||.+...... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 3466678999999999999985 468899999997643211 0135899999999999999999988864 4579999
Q ss_pred eccccc
Q 004953 699 LKLYIY 704 (722)
Q Consensus 699 ~ey~~~ 704 (722)
||||++
T Consensus 156 Me~~Eh 161 (419)
T KOG0663|consen 156 MEYVEH 161 (419)
T ss_pred HHHHHh
Confidence 999986
No 135
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.94 E-value=2.5e-09 Score=111.63 Aligned_cols=91 Identities=29% Similarity=0.459 Sum_probs=78.2
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~ 695 (722)
.++|+..+.||+|+||.||++..+ ++..||+|.+..... ...++|.+|+.++++++||||++++++|..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 456888899999999999999853 367899999875432 3346799999999999999999999999998899
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++|+||+++|+|.+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~ 101 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRH 101 (288)
T ss_pred EEEEecCCCCCHHHHHHH
Confidence 999999999999998864
No 136
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.94 E-value=3.2e-09 Score=108.41 Aligned_cols=84 Identities=31% Similarity=0.496 Sum_probs=72.6
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
+.||+|+||.||+|.. .+++.||+|...... ......|.+|++++.+++||||++++++|...+..++|+||+++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999986 468899999876432 23345799999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 004953 708 FQFSIK 713 (722)
Q Consensus 708 ~~~l~~ 713 (722)
.+++++
T Consensus 81 ~~~~~~ 86 (252)
T cd05084 81 LTFLRT 86 (252)
T ss_pred HHHHHh
Confidence 988754
No 137
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.93 E-value=3.5e-09 Score=109.37 Aligned_cols=83 Identities=27% Similarity=0.332 Sum_probs=70.1
Q ss_pred eeecCCCeeEEEEEeCC---CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCc
Q 004953 631 QIGQGGYGKVYKGILPD---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLF 706 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l~~---g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~ 706 (722)
.||+|+||.||+|...+ ...+|+|.+.... .....+|.+|+++++.++|+||++++|+|...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999998543 3468888876433 2334578999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004953 707 IFQFSIK 713 (722)
Q Consensus 707 L~~~l~~ 713 (722)
|.+++++
T Consensus 82 L~~~l~~ 88 (269)
T cd05042 82 LKNYLRS 88 (269)
T ss_pred HHHHHHh
Confidence 9988765
No 138
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.93 E-value=2.7e-09 Score=113.19 Aligned_cols=89 Identities=25% Similarity=0.492 Sum_probs=73.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCc----EEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~----~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
.+|+..+.||+|+||.||+|++. +|. .||||.++... ....++|..|+.++..++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 35788899999999999999863 333 48999986543 23456799999999999999999999999764 5679
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
|+||+++|+|.+++++
T Consensus 86 v~e~~~~g~l~~~l~~ 101 (316)
T cd05108 86 ITQLMPFGCLLDYVRE 101 (316)
T ss_pred eeecCCCCCHHHHHHh
Confidence 9999999999888765
No 139
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.93 E-value=2.4e-09 Score=111.56 Aligned_cols=89 Identities=24% Similarity=0.282 Sum_probs=75.8
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|+||+||++.. ++|..||+|.+.... ....+.|.+|++++..++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecC
Confidence 455567899999999999986 458899999876432 233567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++++
T Consensus 86 ~~~~L~~~~~~ 96 (284)
T cd06620 86 DCGSLDRIYKK 96 (284)
T ss_pred CCCCHHHHHHh
Confidence 99999877654
No 140
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.93 E-value=3.5e-09 Score=123.39 Aligned_cols=90 Identities=22% Similarity=0.324 Sum_probs=77.6
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|...+.||+|+||.||+|... .|+.||||+++.... ...+.|.+|++++++++|||||++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 45777889999999999999864 588999999865322 22457999999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++.+
T Consensus 82 EY~eGGSL~~lL~s 95 (932)
T PRK13184 82 PYIEGYTLKSLLKS 95 (932)
T ss_pred EcCCCCCHHHHHHH
Confidence 99999999888754
No 141
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=1.9e-10 Score=119.85 Aligned_cols=97 Identities=20% Similarity=0.330 Sum_probs=79.5
Q ss_pred cCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHH--HHHHHHHHHhcC-CCcccceEEEEEeCC-eEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKE--FLTEIQFLSRLH-HRNLVSLVGYCDEEG-EQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~--f~~E~~~l~~l~-H~Niv~l~g~~~~~~-~~~Lv 698 (722)
++|...+.+|.|.||.||+|+ ...|..||||+++..-.. .++ =.+|+..|.++. |||||+|...+.+.+ ..++|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 345556789999999999998 467899999999764322 233 478999999998 999999999999877 99999
Q ss_pred eccccc---------------CcHHHHHHHHHhhhccC
Q 004953 699 LKLYIY---------------LFIFQFSIKLIFAIAMF 721 (722)
Q Consensus 699 ~ey~~~---------------G~L~~~l~~~~~~~a~~ 721 (722)
||||+. .++..+++|+..|+|.+
T Consensus 89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hi 126 (538)
T KOG0661|consen 89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHI 126 (538)
T ss_pred HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHH
Confidence 999964 46688899999888753
No 142
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.93 E-value=3.4e-09 Score=118.98 Aligned_cols=88 Identities=11% Similarity=0.024 Sum_probs=75.4
Q ss_pred ccCCCeeecCCCeeEEEEEeC-C-CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-D-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|...+.||+|+||.||++... + +..||+|.+..........+.+|++++++++|||||++++++..++..++||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 667789999999999999843 3 67889998755444444568889999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 149 gg~L~~~l~~ 158 (478)
T PTZ00267 149 GGDLNKQIKQ 158 (478)
T ss_pred CCCHHHHHHH
Confidence 9999887754
No 143
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.93 E-value=2.8e-09 Score=110.08 Aligned_cols=89 Identities=22% Similarity=0.390 Sum_probs=75.4
Q ss_pred CccCCCeeecCCCeeEEEEEeCC-C---cEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~-g---~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+++..+.||+|+||.||+|.... + ..||||.++.. .....++|..|+.++++++||||+++++++..++..++|+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 35567899999999999999643 3 36999998754 2334567999999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++++
T Consensus 85 e~~~~~~L~~~l~~ 98 (269)
T cd05065 85 EFMENGALDSFLRQ 98 (269)
T ss_pred ecCCCCcHHHHHhh
Confidence 99999999888764
No 144
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.93 E-value=2.9e-09 Score=115.50 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=81.2
Q ss_pred HHHHHHhhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 004953 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (722)
Q Consensus 616 ~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~ 691 (722)
+.++....++|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++..++|||||++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3444555678988999999999999999864 5789999998532 11223458899999999999999999999999
Q ss_pred CCeEEEEecccccCcHHHHHHH
Q 004953 692 EGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 692 ~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
++..++||||+++|+|.+++++
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~ 136 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN 136 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh
Confidence 9999999999999999887654
No 145
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.92 E-value=5.5e-09 Score=107.62 Aligned_cols=89 Identities=26% Similarity=0.352 Sum_probs=76.1
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|...+.||+|+||.||+|.. .+++.||||.++.. .......|.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4677788999999999999985 46899999987532 2233456899999999999999999999999999999999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
||+++|+|.+++.
T Consensus 82 e~~~~~~L~~~~~ 94 (267)
T cd08228 82 ELADAGDLSQMIK 94 (267)
T ss_pred EecCCCcHHHHHH
Confidence 9999999987764
No 146
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.92 E-value=4.3e-10 Score=122.72 Aligned_cols=87 Identities=26% Similarity=0.411 Sum_probs=72.3
Q ss_pred cCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC------CeEEEE
Q 004953 627 NSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GEQVLP 698 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~------~~~~Lv 698 (722)
...+.+|+|+||.||+|. -..|+.||||..+... ....+...+|+++|++++|+|||++++.-.+. ....+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 345789999999999999 4579999999997643 34456789999999999999999999876543 357899
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
||||.+|+|+..+++
T Consensus 96 mEyC~gGsL~~~L~~ 110 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNS 110 (732)
T ss_pred EeecCCCcHHHHhcC
Confidence 999999999877654
No 147
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.92 E-value=3.9e-09 Score=112.06 Aligned_cols=84 Identities=25% Similarity=0.275 Sum_probs=70.6
Q ss_pred CeeecCCCeeEEEEEe----CCCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 630 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l----~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+.||+|+||.||++.. .+|+.||||+++.... .....+..|++++.+++|||||++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3578999999864321 223457889999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 82 ~~~L~~~l~~ 91 (318)
T cd05582 82 GGDLFTRLSK 91 (318)
T ss_pred CCcHHHHHHH
Confidence 9999877643
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.92 E-value=5e-09 Score=107.88 Aligned_cols=90 Identities=30% Similarity=0.403 Sum_probs=77.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++.+++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 46778899999999999999975 7899999988532 2223457999999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++.+
T Consensus 82 e~~~~~~L~~~l~~ 95 (267)
T cd08224 82 ELADAGDLSRMIKH 95 (267)
T ss_pred ecCCCCCHHHHHHH
Confidence 99999999887753
No 149
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.92 E-value=2.9e-09 Score=111.64 Aligned_cols=90 Identities=23% Similarity=0.365 Sum_probs=74.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC---------------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD---------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVG 687 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~---------------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g 687 (722)
.+|...+.||+|+||.||++...+ ...||||.++... ......|.+|++++.+++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 357777899999999999987532 2358999987542 233457999999999999999999999
Q ss_pred EEEeCCeEEEEecccccCcHHHHHHH
Q 004953 688 YCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 688 ~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
++...+..++||||+++|+|.+++.+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~ 110 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQ 110 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHh
Confidence 99999999999999999999888743
No 150
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.92 E-value=3.3e-09 Score=114.31 Aligned_cols=92 Identities=23% Similarity=0.308 Sum_probs=79.5
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
...|.....||+|.|+.|..|.. ..|..||+|.++.... .....+.+|+++|..+.|||||+++.+...+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 45677778999999999999985 4689999999975432 22345899999999999999999999999999999999
Q ss_pred cccccCcHHHHHHHH
Q 004953 700 KLYIYLFIFQFSIKL 714 (722)
Q Consensus 700 ey~~~G~L~~~l~~~ 714 (722)
||..+|++++|+.++
T Consensus 135 eya~~ge~~~yl~~~ 149 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH 149 (596)
T ss_pred EeccCchhHHHHHhc
Confidence 999999999998764
No 151
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.92 E-value=3.7e-09 Score=109.05 Aligned_cols=90 Identities=22% Similarity=0.428 Sum_probs=76.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CC---cEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g---~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++|+..+.||+|+||.||+|... ++ ..+|||.++... ....++|.+|++++.+++|+|++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46777899999999999999974 23 379999986542 23345799999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++.+
T Consensus 85 ~e~~~~~~L~~~~~~ 99 (268)
T cd05063 85 TEYMENGALDKYLRD 99 (268)
T ss_pred EEcCCCCCHHHHHHh
Confidence 999999999888754
No 152
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.91 E-value=3.2e-09 Score=114.80 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=75.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||+||++... ++..||||.++... ......+.+|+.++.+++|+|||++++++.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5777789999999999999864 58899999986421 1223468889999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~gg~L~~~l~~ 94 (360)
T cd05627 82 FLPGGDMMTLLMK 94 (360)
T ss_pred CCCCccHHHHHHh
Confidence 9999999887654
No 153
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.91 E-value=3.6e-09 Score=108.37 Aligned_cols=88 Identities=24% Similarity=0.419 Sum_probs=76.2
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+|...+.||+|+||.||+|..+++..+|+|.+.... ....+|.+|++++.+++|+||+++++++...+..++|+||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 356678899999999999998777789999986432 2345789999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 84 ~~L~~~l~~ 92 (256)
T cd05059 84 GCLLNYLRE 92 (256)
T ss_pred CCHHHHHHh
Confidence 999988754
No 154
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.91 E-value=5.1e-09 Score=109.89 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=78.0
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+|+..+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.++.+++|+||+++++++..++..++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 3566678899999999999985 468899999987654444567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 100 ~~~~L~~~~~~ 110 (296)
T cd06654 100 AGGSLTDVVTE 110 (296)
T ss_pred CCCCHHHHHHh
Confidence 99999888654
No 155
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.91 E-value=4.1e-09 Score=112.62 Aligned_cols=89 Identities=20% Similarity=0.200 Sum_probs=75.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|...+.||+|+||+||++... .++.||+|.+.... ......|..|+.++..++|+||+++.+++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 5677789999999999999975 47789999985321 1223458899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 y~~~g~L~~~l~~ 94 (332)
T cd05623 82 YYVGGDLLTLLSK 94 (332)
T ss_pred ccCCCcHHHHHHH
Confidence 9999999998865
No 156
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.91 E-value=3.9e-09 Score=109.37 Aligned_cols=92 Identities=27% Similarity=0.400 Sum_probs=77.3
Q ss_pred cCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
++|+....||+|+||+||+|... +...||+|.+...... ..++|.+|++++.+++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 45777889999999999999863 2457999988654332 3467999999999999999999999999989999
Q ss_pred EEecccccCcHHHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~~~ 715 (722)
+||||+++|+|.+++.+..
T Consensus 85 lv~e~~~~~~L~~~i~~~~ 103 (275)
T cd05046 85 MILEYTDLGDLKQFLRATK 103 (275)
T ss_pred EEEEecCCCcHHHHHHhcc
Confidence 9999999999999876543
No 157
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.91 E-value=3.7e-09 Score=109.71 Aligned_cols=92 Identities=28% Similarity=0.418 Sum_probs=77.9
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCC------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~ 695 (722)
+++|...+.||+|+||.||+|...+ +..||+|...... .....+|..|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4567788999999999999998743 5678999886433 33345799999999999999999999999998999
Q ss_pred EEEecccccCcHHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~~ 714 (722)
++||||+++|+|.+++.+.
T Consensus 85 ~lv~e~~~g~~L~~~i~~~ 103 (277)
T cd05036 85 FILLELMAGGDLKSFLREN 103 (277)
T ss_pred EEEEecCCCCCHHHHHHHh
Confidence 9999999999999887543
No 158
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.90 E-value=4.1e-09 Score=108.52 Aligned_cols=83 Identities=19% Similarity=0.323 Sum_probs=69.7
Q ss_pred CeeecCCCeeEEEEEeCC-------------CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 630 TQIGQGGYGKVYKGILPD-------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~-------------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
+.||+|+||.||+|.+.. ...||+|.+..........|..|+.++..++|||||+++|+|......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998632 2358999887654444567899999999999999999999999999999
Q ss_pred EEecccccCcHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSI 712 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~ 712 (722)
+||||+++|.|..++.
T Consensus 81 lv~e~~~~~~l~~~~~ 96 (262)
T cd05077 81 MVEEFVEFGPLDLFMH 96 (262)
T ss_pred EEEecccCCCHHHHHH
Confidence 9999999999876654
No 159
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.90 E-value=5.5e-09 Score=106.81 Aligned_cols=89 Identities=18% Similarity=0.276 Sum_probs=76.9
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|+||.||++... ++..||+|.+... .....+++.+|++++++++|||++++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3566788999999999999864 5889999998543 233456799999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++++|.+++.+
T Consensus 81 ~~~~~L~~~l~~ 92 (256)
T cd08529 81 AENGDLHKLLKM 92 (256)
T ss_pred CCCCcHHHHHHH
Confidence 999999888765
No 160
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.90 E-value=3.5e-09 Score=110.48 Aligned_cols=85 Identities=22% Similarity=0.321 Sum_probs=72.1
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|+||.||++... ++..||||+++... ....+.+.+|++++.+++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5677789999999999999975 57899999986432 22245688999999999999999999999999999999999
Q ss_pred cccCcHHH
Q 004953 702 YIYLFIFQ 709 (722)
Q Consensus 702 ~~~G~L~~ 709 (722)
++++.+..
T Consensus 82 ~~~~~l~~ 89 (287)
T cd07848 82 VEKNMLEL 89 (287)
T ss_pred CCCCHHHH
Confidence 99886643
No 161
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.90 E-value=6.6e-09 Score=110.84 Aligned_cols=84 Identities=19% Similarity=0.167 Sum_probs=70.7
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
++||+|+||.||++... ++..||||.++.... ...+.+..|..++.++ +|||||++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999864 588999999965321 2234588999999998 799999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 g~L~~~~~~ 89 (329)
T cd05588 81 GDLMFHMQR 89 (329)
T ss_pred CCHHHHHHH
Confidence 999877643
No 162
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.90 E-value=3.6e-09 Score=108.64 Aligned_cols=88 Identities=23% Similarity=0.372 Sum_probs=75.7
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+.|+..+.||+|+||.||+|..++++.||+|.+.... ...++|.+|+.++++++|+||+++.+++ ..+..++++||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence 4567778999999999999998889999999987543 2346799999999999999999999986 4567899999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 84 ~~~L~~~~~~ 93 (260)
T cd05067 84 NGSLVDFLKT 93 (260)
T ss_pred CCCHHHHHHh
Confidence 9999888654
No 163
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.90 E-value=4.3e-09 Score=108.79 Aligned_cols=88 Identities=26% Similarity=0.315 Sum_probs=73.5
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---h-------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---Q-------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~-------~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~ 694 (722)
|...+.||+|+||.||+|.. .+|+.||||.++.... . ..+.+.+|+.++.+++|+|+++++|++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 45568899999999999985 4688999998753211 0 12458889999999999999999999999999
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++|+||+++|+|.+++++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~ 101 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT 101 (272)
T ss_pred eEEEEecCCCCcHHHHHhh
Confidence 9999999999999887655
No 164
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.90 E-value=5.8e-09 Score=111.10 Aligned_cols=84 Identities=19% Similarity=0.131 Sum_probs=71.0
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
+.||+|+||.||++.. .+|..||+|.++... ......+..|++++.+++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 468999999986431 223356788999999999999999999999999999999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
+|.+++.+
T Consensus 81 ~L~~~l~~ 88 (325)
T cd05594 81 ELFFHLSR 88 (325)
T ss_pred cHHHHHHh
Confidence 99776543
No 165
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.90 E-value=5e-10 Score=131.34 Aligned_cols=105 Identities=26% Similarity=0.334 Sum_probs=55.5
Q ss_pred ceeEEEcCCCC--CccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 83 HLRELQLLNLN--LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 83 ~l~~L~L~~~~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
.+++|-+..|. +.......|..++.|++|||++|.--+.+|..+++|-+|++|+|++..++ .+|..++++.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555553 22222223455555555555555444455555555555555555555555 5555555555555555
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCc
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNN 188 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (722)
+..+.-...+|.....|.+|++|.+...
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccccccccccchhhhcccccEEEeecc
Confidence 5555544444555555555555555443
No 166
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.90 E-value=4.8e-09 Score=110.47 Aligned_cols=91 Identities=25% Similarity=0.437 Sum_probs=76.8
Q ss_pred hcCccCCCeeecCCCeeEEEEEe------CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCe
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l------~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~ 694 (722)
.++|...+.||+|+||.||++.. ..+..||||+++.... ...+.|.+|+++++++ +|+||++++++|...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 34688889999999999999974 1245799999875432 3345799999999999 89999999999999999
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++||||+++|+|.+++++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~ 132 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRR 132 (302)
T ss_pred eEEEEEcCCCCcHHHHHHh
Confidence 9999999999999988764
No 167
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.90 E-value=5.3e-09 Score=107.81 Aligned_cols=89 Identities=20% Similarity=0.296 Sum_probs=75.6
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh------hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
+|+..+.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|++++++++|+|||++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 366778999999999999985 5688999999864321 123578999999999999999999999999999999
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
|+||+++|+|.+++.+
T Consensus 81 v~e~~~~~~L~~~l~~ 96 (268)
T cd06630 81 FVEWMAGGSVSHLLSK 96 (268)
T ss_pred EEeccCCCcHHHHHHH
Confidence 9999999999877654
No 168
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.90 E-value=3e-09 Score=114.48 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=76.5
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|...+.||+|+||+||+|... +|+.||||+++... ......|.+|++++..++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 5677789999999999999964 68999999986431 1234568999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~~~~L~~~l~~ 94 (350)
T cd05573 82 YMPGGDLMNLLIR 94 (350)
T ss_pred CCCCCCHHHHHHH
Confidence 9999999887654
No 169
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.89 E-value=4.5e-09 Score=110.15 Aligned_cols=90 Identities=20% Similarity=0.249 Sum_probs=78.0
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
++|...+.||+|+||.||++.. .++..||+|.+........+.|.+|+.++.+++||||++++++|...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4577778999999999999985 468899999986544444567899999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 99 ~~~~L~~~~~~ 109 (293)
T cd06647 99 AGGSLTDVVTE 109 (293)
T ss_pred CCCcHHHHHhh
Confidence 99999888764
No 170
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.89 E-value=3.8e-09 Score=109.11 Aligned_cols=83 Identities=23% Similarity=0.301 Sum_probs=69.3
Q ss_pred eeecCCCeeEEEEEeCCC---cEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCc
Q 004953 631 QIGQGGYGKVYKGILPDG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLF 706 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l~~g---~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~ 706 (722)
.||+|+||.||+|...++ ..+++|.++... ....+.|.+|+.++..++|||||+++|+|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985443 346677765432 2345679999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004953 707 IFQFSIK 713 (722)
Q Consensus 707 L~~~l~~ 713 (722)
|.+++++
T Consensus 82 L~~~l~~ 88 (268)
T cd05086 82 LKSYLSQ 88 (268)
T ss_pred HHHHHHh
Confidence 9988765
No 171
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.89 E-value=4.6e-09 Score=109.29 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=68.8
Q ss_pred eecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||+|+||+||++.. .+|+.||||++..... ...+.+..|++++.+++|+||+++.+++..++..++|||||++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999985 4688999999864322 1234678899999999999999999999999999999999999999
Q ss_pred HHHHH
Q 004953 708 FQFSI 712 (722)
Q Consensus 708 ~~~l~ 712 (722)
.++++
T Consensus 81 ~~~~~ 85 (280)
T cd05608 81 RYHIY 85 (280)
T ss_pred HHHHH
Confidence 77653
No 172
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.89 E-value=4.1e-09 Score=108.44 Aligned_cols=88 Identities=28% Similarity=0.506 Sum_probs=76.5
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+|...+.||+|+||.||+|... .++.||+|.++.. ....++|.+|++++.+++|+||++++++|..++..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4667789999999999999964 4889999998653 2335679999999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 86 ~~~L~~~~~~ 95 (263)
T cd05052 86 YGNLLDYLRE 95 (263)
T ss_pred CCcHHHHHHh
Confidence 9999887654
No 173
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.89 E-value=4.6e-09 Score=107.86 Aligned_cols=89 Identities=22% Similarity=0.348 Sum_probs=76.7
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.++|...+.||+|+||.||++...++..+|+|.+.... ...+.|.+|++++++++|+||+++.+++.. +..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 35677789999999999999998778889999886532 234679999999999999999999999877 7789999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++++
T Consensus 83 ~~~~L~~~~~~ 93 (260)
T cd05073 83 AKGSLLDFLKS 93 (260)
T ss_pred CCCcHHHHHHh
Confidence 99999888764
No 174
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.89 E-value=3.6e-09 Score=110.28 Aligned_cols=98 Identities=23% Similarity=0.310 Sum_probs=80.7
Q ss_pred ccHHHHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEe
Q 004953 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (722)
Q Consensus 614 ~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~ 691 (722)
+.++.+..++++|+..+.||+|+||.||++.. .+++.+|+|.++... ....++.+|+.++.++ +|+||++++++|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45566777888999999999999999999986 457899999886432 2235688999999999 79999999999853
Q ss_pred -----CCeEEEEecccccCcHHHHHH
Q 004953 692 -----EGEQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 692 -----~~~~~Lv~ey~~~G~L~~~l~ 712 (722)
++..++||||+++|+|.+++.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~ 112 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVK 112 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHH
Confidence 456899999999999988764
No 175
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.89 E-value=4.7e-09 Score=110.11 Aligned_cols=90 Identities=23% Similarity=0.354 Sum_probs=75.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-----------------CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccce
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-----------------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSL 685 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-----------------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l 685 (722)
++|+..+.||+|+||.||++... ++..||+|+++... .....+|.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 45777889999999999998532 23468999997543 2334679999999999999999999
Q ss_pred EEEEEeCCeEEEEecccccCcHHHHHHH
Q 004953 686 VGYCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 686 ~g~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
++++...+..++||||+++|+|.+++.+
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSR 112 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHh
Confidence 9999999999999999999999988765
No 176
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.89 E-value=7.2e-09 Score=107.56 Aligned_cols=87 Identities=21% Similarity=0.245 Sum_probs=74.7
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|+..+.||+|+||.||+|.. .++..||||...... ....+.|.+|+.++.+++|+||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 55678899999999999986 468899999875432 2334578999999999999999999999999999999999999
Q ss_pred cCcHHHHHH
Q 004953 704 YLFIFQFSI 712 (722)
Q Consensus 704 ~G~L~~~l~ 712 (722)
+|+|.+++.
T Consensus 86 ~~~l~~~i~ 94 (277)
T cd06641 86 GGSALDLLE 94 (277)
T ss_pred CCcHHHHHh
Confidence 999988764
No 177
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.89 E-value=7.4e-09 Score=109.03 Aligned_cols=90 Identities=23% Similarity=0.332 Sum_probs=74.5
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
.++|...+.||+|+||.||+|... +++.||||.++.... .....+.+|++++++++|||||++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 356778899999999999999964 688999999864322 223467899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|++ |+|.+++.+
T Consensus 84 ~~~-~~l~~~~~~ 95 (303)
T cd07869 84 YVH-TDLCQYMDK 95 (303)
T ss_pred CCC-cCHHHHHHh
Confidence 996 677666543
No 178
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.88 E-value=6.6e-09 Score=108.61 Aligned_cols=89 Identities=21% Similarity=0.285 Sum_probs=74.1
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
++|...+.||+|+||.||+|... ++..||+|.++.... .....+.+|++++.+++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 35777889999999999999864 688999999864322 2334688999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
++ |+|.+++++
T Consensus 85 ~~-~~l~~~l~~ 95 (288)
T cd07871 85 LD-SDLKQYLDN 95 (288)
T ss_pred CC-cCHHHHHHh
Confidence 98 488776543
No 179
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.88 E-value=4.4e-09 Score=108.45 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=75.8
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+|...+.||+|+||.||+|.. .++..||+|.++.........+.+|+.++..++||||+++++++..++..++|+||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 455567899999999999985 4588999999876544444568899999999999999999999999999999999999
Q ss_pred cCcHHHHHH
Q 004953 704 YLFIFQFSI 712 (722)
Q Consensus 704 ~G~L~~~l~ 712 (722)
+|+|.++++
T Consensus 90 ~~~L~~~~~ 98 (267)
T cd06645 90 GGSLQDIYH 98 (267)
T ss_pred CCcHHHHHH
Confidence 999988764
No 180
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.88 E-value=5.1e-09 Score=107.78 Aligned_cols=88 Identities=25% Similarity=0.409 Sum_probs=74.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
++|...+.||+|+||.||+|...+...||+|+++.... ..++|.+|++++.+++|+||+++++++. ++..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 45677789999999999999987777899999975332 3457999999999999999999999874 466899999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 84 ~~~L~~~~~~ 93 (262)
T cd05071 84 KGSLLDFLKG 93 (262)
T ss_pred CCcHHHHHhh
Confidence 9999888764
No 181
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.88 E-value=1.2e-10 Score=117.01 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=132.8
Q ss_pred cccCCCCCCEEECCCCCCccC----CCccccCCCCCCEEeccCCcCCC----CCCc-------cCCCCCCCcEEEcccCC
Q 004953 101 EIGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTG----SLPE-------ELGYLPKLDRIQIDQNY 165 (722)
Q Consensus 101 ~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~----~~p~-------~~~~l~~L~~L~L~~N~ 165 (722)
.+..+..++.|+|++|.+... +...+.+.++|+..++++- ++| .+|+ .+...++|+.|+|++|-
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 345667788888888887532 3334566677777777643 222 2232 23344566666666665
Q ss_pred CCCCCchh----hcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCC
Q 004953 166 ISGSLPKS----FANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (722)
Q Consensus 166 l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~ 241 (722)
+....+.. +..++.|++|+|.+|.+...-...++ ..|.+|. .| ...+.-+.|+++...+|++...
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~-------kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VN-------KKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HH-------hccCCCcceEEEEeeccccccc
Confidence 54332222 23344455555555544311100111 0111111 11 1233446778888888877531
Q ss_pred C---cchhccCCCCCcEEEccCCCCccCC-----CCCCCCCCccEEEccCCCCCccCCCccccCCcCEEEccCCcCcccC
Q 004953 242 T---IPASYSNMSKLLKLSLRNCSLQGPM-----PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI 313 (722)
Q Consensus 242 ~---~~~~~~~l~~L~~L~L~~N~l~~~~-----~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~L~~N~l~~~~ 313 (722)
. +...|...+.|+.+.+..|.|...- ..+..+++|+.|||.+|-++-.-.. .+
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~-------------------~L 233 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV-------------------AL 233 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH-------------------HH
Confidence 1 1234555667777777777765311 1255666666666666665521110 12
Q ss_pred CccCCCCCCCCEEeCCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCC-----CCCC-CCCCceEEEccCCcCc
Q 004953 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI-----SGSF-NIPPNVTVRLRGNPFC 385 (722)
Q Consensus 314 ~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~-----~~~~-~~~~l~~l~l~~N~l~ 385 (722)
...+..+++|+.|+++++.+.......+..-..-..+.|++|.+.+|.++.- ...+ ..+.+..|+|++|.+.
T Consensus 234 akaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 234 AKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 2345556666666666666665555554433222346677777777777631 1111 4666777788888773
No 182
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.88 E-value=3.9e-09 Score=110.09 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=76.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|+||.||++... .|..||+|.++.. ......+|.+|++++.+++|+||+++++++..++..++|+||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4566788999999999999975 6899999988643 2233457999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++.+
T Consensus 82 ~~~~l~~~~~~ 92 (286)
T cd06622 82 DAGSLDKLYAG 92 (286)
T ss_pred CCCCHHHHHHh
Confidence 99999887765
No 183
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.88 E-value=7.8e-09 Score=105.77 Aligned_cols=89 Identities=17% Similarity=0.244 Sum_probs=76.3
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||.+.. .++..+++|.+... .....++|.+|++++++++|+||+++++++.+.+..+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 56678999999999998874 46889999987643 2334467999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHH
Q 004953 703 IYLFIFQFSIKL 714 (722)
Q Consensus 703 ~~G~L~~~l~~~ 714 (722)
++|+|.+++.+.
T Consensus 82 ~~~~L~~~~~~~ 93 (256)
T cd08221 82 NGGTLYDKIVRQ 93 (256)
T ss_pred CCCcHHHHHHhc
Confidence 999999887653
No 184
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.87 E-value=8.6e-09 Score=109.95 Aligned_cols=84 Identities=19% Similarity=0.145 Sum_probs=70.0
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||++... +++.||+|.++... ....+.+..|+.++.++ +|||||++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 57899999986532 22234578899988877 899999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~~~~ 89 (329)
T cd05618 81 GDLMFHMQR 89 (329)
T ss_pred CCHHHHHHH
Confidence 999776543
No 185
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.87 E-value=6.5e-09 Score=108.12 Aligned_cols=89 Identities=25% Similarity=0.400 Sum_probs=77.0
Q ss_pred CccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++.....||+|+||.||++... ++..+|+|.+........+.|.+|++++.+++|+||+++++++...+..+++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 4566788999999999999742 3568999998766555567899999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+++|+|.+++++
T Consensus 86 ~e~~~~~~L~~~i~~ 100 (280)
T cd05092 86 FEYMRHGDLNRFLRS 100 (280)
T ss_pred EecCCCCCHHHHHHh
Confidence 999999999888764
No 186
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.87 E-value=5.3e-09 Score=107.16 Aligned_cols=82 Identities=24% Similarity=0.433 Sum_probs=69.0
Q ss_pred CeeecCCCeeEEEEEeCCCc-----------EEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 630 TQIGQGGYGKVYKGILPDGT-----------VVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~-----------~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
+.||+|+||.||+|...+.. .|++|.+...... ...|.+|+.++++++|+||++++|+|.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 36899999999999975432 5788877654332 5689999999999999999999999988 788999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+++|+|.+++++
T Consensus 79 ~e~~~~~~L~~~l~~ 93 (259)
T cd05037 79 EEYVKFGPLDVFLHR 93 (259)
T ss_pred EEcCCCCcHHHHHHh
Confidence 999999999888765
No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.87 E-value=6.8e-09 Score=109.37 Aligned_cols=90 Identities=30% Similarity=0.545 Sum_probs=74.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCc--EEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~--~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++|+..+.||+|+||.||+|... ++. .+|+|+++... ....++|.+|++++.++ +|+|||++++++..++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 35677789999999999999964 454 46888776432 23345789999999999 899999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+++|+|.+++++
T Consensus 87 ~e~~~~~~L~~~l~~ 101 (303)
T cd05088 87 IEYAPHGNLLDFLRK 101 (303)
T ss_pred EEeCCCCcHHHHHHh
Confidence 999999999998764
No 188
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.87 E-value=8.1e-09 Score=105.31 Aligned_cols=84 Identities=32% Similarity=0.527 Sum_probs=74.1
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHH
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
+.||+|+||.||++...+++.||+|.++..... ..+.|.+|++++.+++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999877999999998654333 4567999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 004953 709 QFSIK 713 (722)
Q Consensus 709 ~~l~~ 713 (722)
+++++
T Consensus 81 ~~l~~ 85 (251)
T cd05041 81 TFLRK 85 (251)
T ss_pred HHHHh
Confidence 88754
No 189
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.87 E-value=6.2e-09 Score=108.95 Aligned_cols=89 Identities=24% Similarity=0.432 Sum_probs=77.1
Q ss_pred CccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
+|...+.||+|+||.||+|+.. ++..+|+|.+........+.|.+|++++.+++|+||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4666789999999999999742 3457899998766555567899999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++.+
T Consensus 86 ~e~~~~~~L~~~i~~ 100 (291)
T cd05094 86 FEYMKHGDLNKFLRA 100 (291)
T ss_pred EecCCCCcHHHHHHh
Confidence 999999999998754
No 190
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.87 E-value=7.7e-09 Score=105.82 Aligned_cols=88 Identities=27% Similarity=0.469 Sum_probs=76.4
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+|+..+.||+|+||.||++...++..+|+|.+.... ....+|.+|++++.+++|||++++++++......++|+||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 466678899999999999998778899999986432 2345799999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.++++.
T Consensus 84 ~~L~~~~~~ 92 (256)
T cd05112 84 GCLSDYLRA 92 (256)
T ss_pred CcHHHHHHh
Confidence 999887653
No 191
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.87 E-value=8.7e-09 Score=109.23 Aligned_cols=84 Identities=17% Similarity=0.162 Sum_probs=69.7
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||+|... ++..||||.++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 47899999986431 12234577788888764 999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 81 g~L~~~l~~ 89 (316)
T cd05619 81 GDLMFHIQS 89 (316)
T ss_pred CcHHHHHHH
Confidence 999887754
No 192
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.87 E-value=7.2e-09 Score=107.82 Aligned_cols=90 Identities=30% Similarity=0.520 Sum_probs=76.0
Q ss_pred CccCCCeeecCCCeeEEEEEeCC------CcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~------g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
+|+..+.||+|+||.||+|.... ...||+|.++.... ....+|.+|++++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 46667899999999999998633 25799999865432 234579999999999999999999999999899999
Q ss_pred EecccccCcHHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~~ 714 (722)
+|||+++|+|.+++.+.
T Consensus 86 ~~e~~~~~~L~~~l~~~ 102 (283)
T cd05048 86 LFEYLAHGDLHEFLVRN 102 (283)
T ss_pred EEecCCCCcHHHHHHhc
Confidence 99999999999988653
No 193
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.87 E-value=2.1e-09 Score=98.00 Aligned_cols=95 Identities=24% Similarity=0.366 Sum_probs=74.8
Q ss_pred CccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|.||+||||. ...++.||.|+++-.. ..-.....+|+.+++.++|+|||+++.....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 35556789999999999998 4568899999986432 22235688999999999999999999999999999999999
Q ss_pred ccc----------CcH-----HHHHHHHHhhhc
Q 004953 702 YIY----------LFI-----FQFSIKLIFAIA 719 (722)
Q Consensus 702 ~~~----------G~L-----~~~l~~~~~~~a 719 (722)
+.. |++ ..|+.|...|++
T Consensus 83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~ 115 (292)
T KOG0662|consen 83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLG 115 (292)
T ss_pred hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhh
Confidence 963 443 455556555554
No 194
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.86 E-value=9.8e-09 Score=107.44 Aligned_cols=90 Identities=21% Similarity=0.341 Sum_probs=78.0
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+.|+..+.||+|+||.||+|... ++..||+|.+........+.|.+|++++++++|+||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 34666788999999999999964 48899999997665555677999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++++
T Consensus 92 ~~~~l~~~~~~ 102 (292)
T cd06644 92 PGGAVDAIMLE 102 (292)
T ss_pred CCCcHHHHHHh
Confidence 99999776543
No 195
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.86 E-value=8.5e-09 Score=107.82 Aligned_cols=88 Identities=26% Similarity=0.432 Sum_probs=74.4
Q ss_pred ccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
|...+.||+|+||.||+|+.. ....||+|.+..... ...++|.+|+.++.+++|||||+++++|...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 566789999999999999852 235789998865432 3345799999999999999999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+++|+|.+++.+
T Consensus 82 ~e~~~~~~L~~~l~~ 96 (290)
T cd05045 82 VEYAKYGSLRSFLRE 96 (290)
T ss_pred EEecCCCCHHHHHHh
Confidence 999999999998764
No 196
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.86 E-value=8.1e-09 Score=107.18 Aligned_cols=88 Identities=20% Similarity=0.218 Sum_probs=75.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.|+..+.||+|+||.||+|... ++..||+|.+.... ......|.+|+.++.+++|+||+++++++.+++..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3556678999999999999864 58899999986432 334467999999999999999999999999999999999999
Q ss_pred ccCcHHHHHH
Q 004953 703 IYLFIFQFSI 712 (722)
Q Consensus 703 ~~G~L~~~l~ 712 (722)
++|+|.++++
T Consensus 85 ~~~~L~~~i~ 94 (277)
T cd06640 85 GGGSALDLLR 94 (277)
T ss_pred CCCcHHHHHh
Confidence 9999988765
No 197
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.86 E-value=7.8e-09 Score=106.15 Aligned_cols=88 Identities=25% Similarity=0.415 Sum_probs=74.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
++|+..+.||+|+||.||+|..+++..||+|.++.... ..++|.+|+.++.+++|+|++++++++. ++..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 34666789999999999999988888899999875432 3467999999999999999999999874 566899999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 84 ~~~L~~~~~~ 93 (260)
T cd05070 84 KGSLLDFLKD 93 (260)
T ss_pred CCcHHHHHHh
Confidence 9999888653
No 198
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.86 E-value=6.1e-09 Score=107.30 Aligned_cols=89 Identities=26% Similarity=0.365 Sum_probs=76.2
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||++.. .++..+|||.+.... .....+|.+|++++.+++|+||+++++++..++..+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 566678999999999999995 578999999875432 2233579999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 83 ~~~~~~L~~~~~~ 95 (267)
T cd08229 83 LADAGDLSRMIKH 95 (267)
T ss_pred ecCCCCHHHHHHH
Confidence 9999999887653
No 199
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.86 E-value=8.4e-09 Score=109.94 Aligned_cols=85 Identities=19% Similarity=0.162 Sum_probs=71.9
Q ss_pred CCeeecC--CCeeEEEEEe-CCCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 629 STQIGQG--GYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 629 ~~~iG~G--~fG~Vy~g~l-~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
.++||+| +||+||++.. ++|..||||+++.... ...+.+.+|+++++.++|||||+++++|..++..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 7899999986 5689999999965422 223457789999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 83 ~~~l~~~~~~ 92 (327)
T cd08227 83 YGSAKDLICT 92 (327)
T ss_pred CCcHHHHHHh
Confidence 9999888754
No 200
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.86 E-value=9.8e-09 Score=107.11 Aligned_cols=88 Identities=25% Similarity=0.320 Sum_probs=74.2
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|+..+.||+|+||.||++... +++.||||.+..... ...+.+.+|+.++.+++|++++++.+++.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 555678999999999999864 588999999864322 2234578899999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++.+
T Consensus 82 ~~g~~L~~~l~~ 93 (285)
T cd05630 82 MNGGDLKFHIYH 93 (285)
T ss_pred cCCCcHHHHHHH
Confidence 999999887754
No 201
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.86 E-value=1.2e-08 Score=104.65 Aligned_cols=89 Identities=24% Similarity=0.252 Sum_probs=78.4
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|++|.||++... ++..||||++..... ...++|.+|++.+.+++|+|++++++++...+..++|+||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5677789999999999999975 489999999876543 34567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++.+
T Consensus 82 ~~~~L~~~l~~ 92 (264)
T cd06623 82 DGGSLADLLKK 92 (264)
T ss_pred CCCcHHHHHHH
Confidence 99999888764
No 202
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.86 E-value=7.1e-09 Score=110.36 Aligned_cols=86 Identities=17% Similarity=0.240 Sum_probs=68.6
Q ss_pred cCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHH---HhcCCCcccceEEEEEeCCeEEEEe
Q 004953 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l---~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
...+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++ .+++||||+++++++...+..++||
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~ 81 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM 81 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence 44578999999999999864 58999999986432 12234566676654 5678999999999999999999999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
||+++|+|..++.
T Consensus 82 E~~~~~~L~~~~~ 94 (324)
T cd05589 82 EYAAGGDLMMHIH 94 (324)
T ss_pred cCCCCCcHHHHhh
Confidence 9999999966543
No 203
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.85 E-value=9.7e-09 Score=106.09 Aligned_cols=88 Identities=25% Similarity=0.399 Sum_probs=71.8
Q ss_pred ccCCCeeecCCCeeEEEEEeCC----CcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe-----
Q 004953 626 FNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~----g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~----- 694 (722)
|+..+.||+|+||.||+|.... +..||||+++... ....++|.+|++.+.+++|+||++++|++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 3456789999999999998642 3679999987532 2334579999999999999999999999976554
Q ss_pred -EEEEecccccCcHHHHHHH
Q 004953 695 -QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 -~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++++||+++|+|.+++..
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~ 100 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLY 100 (273)
T ss_pred ccEEEEeccCCCCHHHHHHH
Confidence 7999999999999877643
No 204
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.85 E-value=9.8e-09 Score=107.10 Aligned_cols=88 Identities=23% Similarity=0.311 Sum_probs=73.8
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|...+.||+|+||+||+|.. .+++.||+|.+..... .....+.+|+++|.+++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 44567899999999999986 4688999999864322 2234578899999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++.+
T Consensus 82 ~~~~~L~~~~~~ 93 (285)
T cd05632 82 MNGGDLKFHIYN 93 (285)
T ss_pred ccCccHHHHHHH
Confidence 999999877654
No 205
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.85 E-value=1.1e-08 Score=106.49 Aligned_cols=89 Identities=25% Similarity=0.362 Sum_probs=75.3
Q ss_pred CccCCCeeecCCCeeEEEEEeC-----CCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQV 696 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-----~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~~ 696 (722)
.|+..+.||+|+||.||++.+. .+..||||.++..... ..++|.+|++++++++|+||+++++++.. +...+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4556688999999999999863 3678999999755432 35679999999999999999999999987 55789
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+||||+++|+|.+++.+
T Consensus 85 lv~e~~~~~~l~~~l~~ 101 (284)
T cd05038 85 LIMEYLPSGSLRDYLQR 101 (284)
T ss_pred EEEecCCCCCHHHHHHh
Confidence 99999999999988765
No 206
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.85 E-value=1.2e-08 Score=104.74 Aligned_cols=90 Identities=21% Similarity=0.270 Sum_probs=76.3
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh-----hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~-----~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
++|...+.||+|+||.||++.. .++..||+|.+..... ...+.+.+|++++.+++||||++++|++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688889999999999999985 4689999998854321 123468999999999999999999999999999999
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
|+||+++|+|.+++.+
T Consensus 82 v~e~~~~~~l~~~~~~ 97 (263)
T cd06625 82 FMEYMPGGSVKDQLKA 97 (263)
T ss_pred EEEECCCCcHHHHHHH
Confidence 9999999999877643
No 207
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.85 E-value=8.8e-09 Score=108.13 Aligned_cols=90 Identities=26% Similarity=0.536 Sum_probs=75.2
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-Cc--EEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~--~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv 698 (722)
++|+..+.||+|+||.||+|...+ +. .+|+|.++... ....+.|.+|++++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 357778899999999999998754 33 47888887432 23345799999999999 799999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+++|+|.+++++
T Consensus 82 ~e~~~~~~L~~~l~~ 96 (297)
T cd05089 82 IEYAPYGNLLDFLRK 96 (297)
T ss_pred EEecCCCcHHHHHHh
Confidence 999999999988754
No 208
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.85 E-value=8.9e-09 Score=108.65 Aligned_cols=90 Identities=18% Similarity=0.342 Sum_probs=75.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeC--------CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
++|...+.||+|+||.||++... ++..+|+|.++... .....++.+|++++.++ +|+||++++++|...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 45777889999999999999742 23579999997542 23345788999999999 8999999999999999
Q ss_pred eEEEEecccccCcHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++||||+++|+|.+++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~ 117 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRA 117 (307)
T ss_pred ceEEEEecCCCCcHHHHHHh
Confidence 99999999999999998865
No 209
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.85 E-value=7.8e-09 Score=106.82 Aligned_cols=92 Identities=25% Similarity=0.361 Sum_probs=76.2
Q ss_pred HhhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeC------
Q 004953 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE------ 692 (722)
Q Consensus 621 ~~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~------ 692 (722)
.+++.|+..+.||+|+||+||+|... +++.||+|.+.... ....++.+|+.++.++ +|+||+++.|++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35566777889999999999999864 57899999986543 3345788999999998 799999999999753
Q ss_pred CeEEEEecccccCcHHHHHHH
Q 004953 693 GEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
...++||||+++|+|.+++.+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~ 102 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKN 102 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHh
Confidence 457999999999999887665
No 210
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.85 E-value=9.5e-09 Score=107.88 Aligned_cols=89 Identities=19% Similarity=0.267 Sum_probs=77.6
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+|+..+.||.|+||.||+|.. .+|+.||+|.+........+.+.+|++++++++|+|++++++++..++..++|+||++
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 99 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLA 99 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecC
Confidence 477778999999999999984 5689999999865544445678999999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 100 ~~~L~~~~~~ 109 (296)
T cd06655 100 GGSLTDVVTE 109 (296)
T ss_pred CCcHHHHHHh
Confidence 9999877654
No 211
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.84 E-value=1.2e-08 Score=104.95 Aligned_cols=90 Identities=23% Similarity=0.255 Sum_probs=73.8
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-----hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~ 695 (722)
.+|...+.||+|+||.||+|.. .+|..||||.+.... ....+.+.+|+.++.+++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4577789999999999999986 458899999875321 12235688999999999999999999988763 467
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++||||+++|+|.+++.+
T Consensus 82 ~~v~e~~~~~~L~~~l~~ 99 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS 99 (265)
T ss_pred EEEEEecCCCcHHHHHHH
Confidence 899999999999888754
No 212
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.84 E-value=2.6e-09 Score=109.64 Aligned_cols=84 Identities=24% Similarity=0.377 Sum_probs=70.7
Q ss_pred CeeecCCCeeEEEEEeCC--------CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~--------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+.||+|+||.||+|.... ...||+|.+........++|.+|+.++..++|||||+++|++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998632 234888888654444456799999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++++
T Consensus 81 ~~~g~L~~~l~~ 92 (258)
T cd05078 81 VKFGSLDTYLKK 92 (258)
T ss_pred CCCCcHHHHHhc
Confidence 999999888754
No 213
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.84 E-value=1.2e-08 Score=106.44 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=74.3
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~Lv~e 700 (722)
+|...+.||.|++|.||++... +++.+|+|.+..... ...++|.+|++++++++||||++++++|... +..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5667789999999999999974 578999999864322 3346799999999999999999999998653 46899999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~~~~L~~~l~~ 94 (287)
T cd06621 82 YCEGGSLDSIYKK 94 (287)
T ss_pred ecCCCCHHHHHHH
Confidence 9999999887654
No 214
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.84 E-value=1.2e-08 Score=108.59 Aligned_cols=84 Identities=17% Similarity=0.144 Sum_probs=66.2
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC--CCcEEEEEEccCC-----ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~--~g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~ 694 (722)
..++|...+.||+|+||+||+|... ++..||||++... .....+.|.+|+++|.+++|+|+|+.+.. .+.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~ 92 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK 92 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence 4467888999999999999999864 5778899987532 11224569999999999999999964422 256
Q ss_pred EEEEecccccCcHH
Q 004953 695 QVLPLKLYIYLFIF 708 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~ 708 (722)
.++||||+++++|.
T Consensus 93 ~~LVmE~~~G~~L~ 106 (365)
T PRK09188 93 DGLVRGWTEGVPLH 106 (365)
T ss_pred cEEEEEccCCCCHH
Confidence 79999999999885
No 215
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.84 E-value=9.9e-09 Score=106.64 Aligned_cols=91 Identities=21% Similarity=0.297 Sum_probs=76.9
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCC-----CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQ 695 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~-----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~~~ 695 (722)
.++|...+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.++.+++|+||++++|++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 3567778999999999999999755 6789999986543 2334678999999999999999999999877 4678
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++++||+++|+|.+++.+
T Consensus 85 ~~~~~~~~~~~L~~~l~~ 102 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQ 102 (280)
T ss_pred EEEEEcCCCCcHHHHHHh
Confidence 999999999999998765
No 216
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.84 E-value=1.7e-09 Score=114.62 Aligned_cols=77 Identities=25% Similarity=0.421 Sum_probs=66.3
Q ss_pred CCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHH
Q 004953 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
.+-+|+|+-|.||.|.+ .+++||||+++... ..+|+-|++++|+||+.+.|+|.......||||||++|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 35689999999999999 57899999986432 35788899999999999999999999999999999999986
Q ss_pred HHHHH
Q 004953 709 QFSIK 713 (722)
Q Consensus 709 ~~l~~ 713 (722)
+.|+.
T Consensus 201 ~VLka 205 (904)
T KOG4721|consen 201 EVLKA 205 (904)
T ss_pred HHHhc
Confidence 65543
No 217
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.84 E-value=1.1e-08 Score=108.67 Aligned_cols=84 Identities=18% Similarity=0.152 Sum_probs=69.7
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||+|+.. +++.||||.++... ....+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36899999999999864 47899999986431 12234578899999876 899999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~l~~ 89 (321)
T cd05591 81 GDLMFQIQR 89 (321)
T ss_pred CcHHHHHHH
Confidence 999876643
No 218
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.84 E-value=1.1e-08 Score=106.54 Aligned_cols=86 Identities=22% Similarity=0.315 Sum_probs=74.5
Q ss_pred cCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
+..+.||+|+||.||+|... ++..+|+|.+........+.|.+|++++.+++||||+++++++..++..++|+||+++|
T Consensus 8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~ 87 (282)
T cd06643 8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 87 (282)
T ss_pred HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence 44567999999999999975 47788999987655555567999999999999999999999999999999999999999
Q ss_pred cHHHHHH
Q 004953 706 FIFQFSI 712 (722)
Q Consensus 706 ~L~~~l~ 712 (722)
+|.+++.
T Consensus 88 ~l~~~~~ 94 (282)
T cd06643 88 AVDAVML 94 (282)
T ss_pred cHHHHHH
Confidence 9977654
No 219
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.84 E-value=7.9e-09 Score=108.17 Aligned_cols=93 Identities=20% Similarity=0.418 Sum_probs=77.5
Q ss_pred HhhcCccCCCeeecCCCeeEEEEEeCC------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeC
Q 004953 621 LATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (722)
Q Consensus 621 ~~t~~f~~~~~iG~G~fG~Vy~g~l~~------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~ 692 (722)
...++|+..+.||+|+||.||++...+ ...+|+|.+.... .+...++.+|++++.++ +|+||++++++|..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 344567778899999999999998632 3679999987532 23345689999999999 899999999999999
Q ss_pred CeEEEEecccccCcHHHHHHH
Q 004953 693 GEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
+..+++|||+++|+|.+++.+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~ 109 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRA 109 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHh
Confidence 999999999999999988754
No 220
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.84 E-value=1e-08 Score=107.15 Aligned_cols=89 Identities=22% Similarity=0.305 Sum_probs=76.0
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|++++.+++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 4666789999999999999864 58999999986432 1233568999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++++
T Consensus 82 ~~~~~~L~~~~~~ 94 (290)
T cd05580 82 YVPGGELFSHLRK 94 (290)
T ss_pred cCCCCCHHHHHHH
Confidence 9999999888654
No 221
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.84 E-value=2.7e-09 Score=114.00 Aligned_cols=90 Identities=23% Similarity=0.286 Sum_probs=76.1
Q ss_pred cCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
..|..-..||+|+.|.||.+. ..+++.||||++........+-..+|+.+|+..+|+|||.++..|...++.|.|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 345566789999999999997 4578899999997654444455789999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|-|-..+
T Consensus 353 ~ggsLTDvVt~ 363 (550)
T KOG0578|consen 353 EGGSLTDVVTK 363 (550)
T ss_pred CCCchhhhhhc
Confidence 99999665433
No 222
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.83 E-value=1.2e-08 Score=108.62 Aligned_cols=84 Identities=25% Similarity=0.254 Sum_probs=67.7
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHH-HHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||++.. .+|+.||||++.... ....+++..|.. ++..++|||||++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999985 468999999986431 122345666665 46779999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~l~~ 89 (325)
T cd05604 81 GELFFHLQR 89 (325)
T ss_pred CCHHHHHHH
Confidence 999776543
No 223
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.83 E-value=1.1e-08 Score=108.80 Aligned_cols=84 Identities=21% Similarity=0.196 Sum_probs=70.1
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||+++.. +++.||||.++... ....+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999864 58899999986431 12335678899999877 799999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 81 g~L~~~i~~ 89 (320)
T cd05590 81 GDLMFHIQK 89 (320)
T ss_pred chHHHHHHH
Confidence 999877654
No 224
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.83 E-value=1.5e-08 Score=104.16 Aligned_cols=88 Identities=24% Similarity=0.306 Sum_probs=76.5
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||+|... ++..||+|.++.... ...+++.+|++++.+++|+||++++|++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 556789999999999999864 688999999865433 24567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++.+
T Consensus 82 ~~~~L~~~~~~ 92 (264)
T cd06626 82 SGGTLEELLEH 92 (264)
T ss_pred CCCcHHHHHhh
Confidence 99999887654
No 225
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.83 E-value=1.4e-08 Score=107.10 Aligned_cols=89 Identities=16% Similarity=0.160 Sum_probs=76.2
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||++... .++.||+|.+..... ...+.+.+|++++..++|+||+++++++..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 5677789999999999999864 578999999865432 223568899999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++++
T Consensus 82 ~~~g~~L~~~l~~ 94 (305)
T cd05609 82 YVEGGDCATLLKN 94 (305)
T ss_pred cCCCCcHHHHHHH
Confidence 9999999888754
No 226
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.83 E-value=1.1e-08 Score=104.74 Aligned_cols=83 Identities=27% Similarity=0.357 Sum_probs=71.4
Q ss_pred CeeecCCCeeEEEEEeCC--C--cEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~--g--~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|.+.+ + ..||||.+..... ...++|.+|++++++++|+|||++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998643 3 3699999976655 445689999999999999999999999988 889999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 80 ~~L~~~l~~ 88 (257)
T cd05040 80 GSLLDRLRK 88 (257)
T ss_pred CcHHHHHHh
Confidence 999888755
No 227
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.83 E-value=1.3e-08 Score=105.48 Aligned_cols=89 Identities=22% Similarity=0.229 Sum_probs=76.5
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||.|+||.||+|... ++..||+|.+.... ......+.+|++++++++|+|++++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 4666788999999999999964 58899999986543 233457899999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 82 ~~~~L~~~~~~ 92 (274)
T cd06609 82 GGGSCLDLLKP 92 (274)
T ss_pred CCCcHHHHHhh
Confidence 99999887664
No 228
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.83 E-value=1.8e-08 Score=103.75 Aligned_cols=88 Identities=24% Similarity=0.336 Sum_probs=73.6
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChh---------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~---------~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~ 695 (722)
|.....||+|+||.||+|.. .++..||+|.+...... ..+.+.+|+.++.+++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 44567899999999999985 45789999988543211 124588999999999999999999999999999
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++|+||+++++|.+++++
T Consensus 82 ~lv~e~~~~~~L~~~l~~ 99 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN 99 (267)
T ss_pred EEEEEecCCCCHHHHHHh
Confidence 999999999999887754
No 229
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.83 E-value=1.3e-08 Score=104.21 Aligned_cols=88 Identities=20% Similarity=0.264 Sum_probs=75.3
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||++.. .+|+.||+|++... .....+++.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 56678999999999999985 46889999998642 2233457999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 82 ~~~~l~~~~~~ 92 (256)
T cd08218 82 EGGDLYKKINA 92 (256)
T ss_pred CCCcHHHHHHh
Confidence 99999877653
No 230
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.83 E-value=1.3e-08 Score=107.94 Aligned_cols=84 Identities=18% Similarity=0.162 Sum_probs=70.1
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||++... ++..||||.++... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 47899999986432 12234578899999888 799999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~~~~ 89 (318)
T cd05570 81 GDLMFHIQR 89 (318)
T ss_pred CCHHHHHHH
Confidence 999777654
No 231
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.82 E-value=1.3e-08 Score=106.67 Aligned_cols=92 Identities=25% Similarity=0.352 Sum_probs=77.0
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCC-----------------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 684 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~-----------------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~ 684 (722)
..+|...+.||+|+||.||++...+ +..||+|++.... ....++|.+|++++.+++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3457778899999999999988532 2468999987543 234567999999999999999999
Q ss_pred eEEEEEeCCeEEEEecccccCcHHHHHHHH
Q 004953 685 LVGYCDEEGEQVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 685 l~g~~~~~~~~~Lv~ey~~~G~L~~~l~~~ 714 (722)
++++|..++..++|+||+++|+|.+++.+.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 113 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKH 113 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhc
Confidence 999999999999999999999999887653
No 232
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.82 E-value=1.2e-08 Score=107.59 Aligned_cols=90 Identities=17% Similarity=0.382 Sum_probs=75.7
Q ss_pred cCccCCCeeecCCCeeEEEEEeC--------CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
.+|...+.||+|+||.||++... ++..||+|.++... ....+++.+|+.++..+ +||||+++++++...+
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 45667789999999999999741 24579999986432 23346799999999999 8999999999999999
Q ss_pred eEEEEecccccCcHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++||||+++|+|.+++.+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~ 114 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRA 114 (304)
T ss_pred ceEEEEecCCCCcHHHHHHh
Confidence 99999999999999998865
No 233
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.82 E-value=1.4e-08 Score=105.41 Aligned_cols=80 Identities=24% Similarity=0.300 Sum_probs=67.7
Q ss_pred eecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||+|+||+||++... +|+.||+|++..... ...+.+..|++++.+++||||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 589999999854221 2234567799999999999999999999999999999999999999
Q ss_pred HHHH
Q 004953 708 FQFS 711 (722)
Q Consensus 708 ~~~l 711 (722)
.+++
T Consensus 81 ~~~~ 84 (277)
T cd05607 81 KYHI 84 (277)
T ss_pred HHHH
Confidence 7665
No 234
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.82 E-value=1.1e-08 Score=105.75 Aligned_cols=88 Identities=23% Similarity=0.375 Sum_probs=72.7
Q ss_pred CccCCCeeecCCCeeEEEEEeCC----CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+|...+.||+|+||.||+|...+ ...||||...... .+..+.|.+|+.++.+++||||++++++|.. +..++||
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~ 85 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM 85 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence 46667899999999999998643 2468999886543 3445679999999999999999999999865 5678999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++.+
T Consensus 86 e~~~~~~L~~~l~~ 99 (270)
T cd05056 86 ELAPLGELRSYLQV 99 (270)
T ss_pred EcCCCCcHHHHHHh
Confidence 99999999988764
No 235
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.82 E-value=1.4e-08 Score=107.99 Aligned_cols=84 Identities=25% Similarity=0.272 Sum_probs=67.6
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHH-HHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
++||+|+||+||+|+.. +|..||+|.+.... ......+.+|.. ++..++|||||++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999964 58899999986432 122334666654 57889999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~l~~ 89 (321)
T cd05603 81 GELFFHLQR 89 (321)
T ss_pred CCHHHHHHH
Confidence 999776543
No 236
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.82 E-value=1.6e-08 Score=105.40 Aligned_cols=92 Identities=18% Similarity=0.217 Sum_probs=80.5
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
.++.|...+.||+|+||.||+|..+ ++..||+|++..... ..+.+.+|++++.+++|+|++++++++..++..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4556777788999999999999975 588999999975433 45679999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHHH
Q 004953 701 LYIYLFIFQFSIKL 714 (722)
Q Consensus 701 y~~~G~L~~~l~~~ 714 (722)
|+++++|.+++.+.
T Consensus 96 ~~~~~~L~~~l~~~ 109 (286)
T cd06614 96 YMDGGSLTDIITQN 109 (286)
T ss_pred ccCCCcHHHHHHHh
Confidence 99999999988764
No 237
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.82 E-value=1.5e-08 Score=107.14 Aligned_cols=88 Identities=20% Similarity=0.296 Sum_probs=73.2
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
++|...+.||+|+||.||+|... ++..||+|+++.... .....+.+|++++.+++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 35677789999999999999864 578899999864332 2334688999999999999999999999999999999999
Q ss_pred cccCcHHHHHH
Q 004953 702 YIYLFIFQFSI 712 (722)
Q Consensus 702 ~~~G~L~~~l~ 712 (722)
+++ +|.+++.
T Consensus 86 ~~~-~l~~~~~ 95 (309)
T cd07872 86 LDK-DLKQYMD 95 (309)
T ss_pred CCC-CHHHHHH
Confidence 985 7766654
No 238
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.82 E-value=1.3e-08 Score=104.11 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=77.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
++|+..+.||+|+||.||+|...+ +..+|+|.+..... .++|.+|++++++++|+||++++|++..++..++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 467778899999999999999765 78999999865322 568999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.++++.
T Consensus 81 ~~~~L~~~l~~ 91 (256)
T cd06612 81 GAGSVSDIMKI 91 (256)
T ss_pred CCCcHHHHHHh
Confidence 99999887653
No 239
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.82 E-value=6.2e-09 Score=119.49 Aligned_cols=97 Identities=26% Similarity=0.430 Sum_probs=81.7
Q ss_pred HHHhhcCccCCCeeecCCCeeEEEEEeC----C----CcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEE
Q 004953 619 MALATNNFNSSTQIGQGGYGKVYKGILP----D----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGY 688 (722)
Q Consensus 619 ~~~~t~~f~~~~~iG~G~fG~Vy~g~l~----~----g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~ 688 (722)
++...+++...+.+|+|.||+|++|.+. . ...||||+++.... .+.+.+..|+++|..+ +|+|||.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 4444555556679999999999999852 1 35799999976543 3456799999999999 79999999999
Q ss_pred EEeCCeEEEEecccccCcHHHHHHHHH
Q 004953 689 CDEEGEQVLPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 689 ~~~~~~~~Lv~ey~~~G~L~~~l~~~~ 715 (722)
|..++..++|+||+++|+|.+|+++.+
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r 397 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKR 397 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhcc
Confidence 999999999999999999999999877
No 240
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.82 E-value=1.5e-08 Score=105.53 Aligned_cols=88 Identities=25% Similarity=0.341 Sum_probs=73.6
Q ss_pred ccCCCeeecCCCeeEEEEEe-----CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVL 697 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-----~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~L 697 (722)
|+..+.||+|+||.||.+.+ .++..||+|.++... ....+.|.+|++++++++|+|++++.+++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 56678899999999999975 247789999987543 22345799999999999999999999999875 56899
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
||||+++|+|.+++.+
T Consensus 86 v~e~~~g~~L~~~l~~ 101 (284)
T cd05079 86 IMEFLPSGSLKEYLPR 101 (284)
T ss_pred EEEccCCCCHHHHHHh
Confidence 9999999999888754
No 241
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.82 E-value=2.1e-08 Score=102.57 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=74.9
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|+..+.||+|+||.||++... ++..+|+|.++.. .....+.+.+|+.++.+++|+||+++.+++..++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 556688999999999999854 6889999988543 23334578899999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 82 ~~~l~~~~~~ 91 (255)
T cd08219 82 GGDLMQKIKL 91 (255)
T ss_pred CCcHHHHHHh
Confidence 9999887654
No 242
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.81 E-value=1.6e-08 Score=107.15 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=68.0
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|... +++.||||.++... ....+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999964 57899999986431 12234566777777654 899999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 g~L~~~~~~ 89 (316)
T cd05592 81 GDLMFHIQS 89 (316)
T ss_pred CcHHHHHHH
Confidence 999877643
No 243
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.81 E-value=1.8e-08 Score=103.35 Aligned_cols=91 Identities=21% Similarity=0.228 Sum_probs=79.3
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
++|...+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||++++|++...+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46777889999999999999864 57889999987654445578999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHH
Q 004953 703 IYLFIFQFSIKL 714 (722)
Q Consensus 703 ~~G~L~~~l~~~ 714 (722)
++++|.+++.+.
T Consensus 83 ~~~~l~~~~~~~ 94 (262)
T cd06613 83 GGGSLQDIYQVT 94 (262)
T ss_pred CCCcHHHHHHhh
Confidence 999998876653
No 244
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.81 E-value=4.8e-09 Score=108.83 Aligned_cols=87 Identities=22% Similarity=0.246 Sum_probs=73.4
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|+..+.||+|+||.||+|... ++..||+|.++... ....+.+.+|++++++++||||+++++++...+..++|+||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 444567999999999999864 57889999986432 2334579999999999999999999999999999999999999
Q ss_pred cCcHHHHHH
Q 004953 704 YLFIFQFSI 712 (722)
Q Consensus 704 ~G~L~~~l~ 712 (722)
+|+|.+++.
T Consensus 86 ~~~L~~~~~ 94 (277)
T cd06642 86 GGSALDLLK 94 (277)
T ss_pred CCcHHHHhh
Confidence 999977653
No 245
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.81 E-value=1.6e-08 Score=107.51 Aligned_cols=84 Identities=25% Similarity=0.270 Sum_probs=67.5
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHH-HHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||+|... +|+.||||.+.... ....+++..|.. ++..++|||||++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999964 68999999986432 122234556655 46789999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 g~L~~~l~~ 89 (323)
T cd05575 81 GELFFHLQR 89 (323)
T ss_pred CCHHHHHHh
Confidence 999776643
No 246
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.81 E-value=1.9e-08 Score=102.84 Aligned_cols=87 Identities=31% Similarity=0.526 Sum_probs=75.3
Q ss_pred cCCCeeecCCCeeEEEEEeCC-----CcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 627 NSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~~-----g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+..+.||+|+||.||++...+ +..||+|+++..... ..+.+.+|++++.+++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 345789999999999999753 378999999765433 45689999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~~~~l~~~~~~ 94 (258)
T smart00219 82 YMEGGDLLDYLRK 94 (258)
T ss_pred ccCCCCHHHHHHh
Confidence 9999999888765
No 247
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.81 E-value=7.3e-09 Score=106.84 Aligned_cols=84 Identities=32% Similarity=0.513 Sum_probs=71.6
Q ss_pred CeeecCCCeeEEEEEeCC-------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 630 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~-------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+.||+|+||.||+|+..+ +..||||.+.... .....+|.+|+.++++++||||++++|+|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 468999999999998642 2579999886543 23346799999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++++
T Consensus 81 ~~~~~L~~~l~~ 92 (269)
T cd05044 81 MEGGDLLSYLRD 92 (269)
T ss_pred cCCCcHHHHHHH
Confidence 999999999865
No 248
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.81 E-value=6.5e-09 Score=112.63 Aligned_cols=88 Identities=18% Similarity=0.229 Sum_probs=74.5
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
-|+..+.+|.|+-|.|..|+. .+|+.+|||.+..+.. .......+|+-+|+-+.||||++|+..+.+..+.|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 355678899999999999984 6799999999965421 122457899999999999999999999999999999999
Q ss_pred ccccCcHHHHHH
Q 004953 701 LYIYLFIFQFSI 712 (722)
Q Consensus 701 y~~~G~L~~~l~ 712 (722)
||++|+|++|+.
T Consensus 93 yv~gGELFdylv 104 (786)
T KOG0588|consen 93 YVPGGELFDYLV 104 (786)
T ss_pred ecCCchhHHHHH
Confidence 999999988743
No 249
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.81 E-value=1.7e-08 Score=104.31 Aligned_cols=84 Identities=30% Similarity=0.546 Sum_probs=70.8
Q ss_pred CeeecCCCeeEEEEEeCC-Cc--EEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILPD-GT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~-g~--~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|...+ +. .+|+|.++... ....+.|.+|++++.++ +||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999754 43 46888886432 33345799999999999 899999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 81 ~~L~~~i~~ 89 (270)
T cd05047 81 GNLLDFLRK 89 (270)
T ss_pred CcHHHHHHh
Confidence 999988764
No 250
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.81 E-value=1e-08 Score=106.29 Aligned_cols=90 Identities=22% Similarity=0.399 Sum_probs=76.6
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC------CcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~ 696 (722)
++|...+.||+|+||.||+|...+ +..||+|.+.... .....+|.+|+.++.+++|+||++++|++...+..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 457777899999999999998642 3689999986543 233457999999999999999999999999999999
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+||||+++|+|.+++.+
T Consensus 86 ~v~e~~~~~~L~~~l~~ 102 (277)
T cd05032 86 VVMELMAKGDLKSYLRS 102 (277)
T ss_pred EEEecCCCCCHHHHHHh
Confidence 99999999999988754
No 251
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.81 E-value=1.3e-08 Score=106.43 Aligned_cols=99 Identities=28% Similarity=0.353 Sum_probs=82.1
Q ss_pred ccHHHHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEe
Q 004953 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (722)
Q Consensus 614 ~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~ 691 (722)
++.+++..++++|...+.||+|+||.||++.. .+++.+|+|.+.... ....++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566777888999999999999999999986 468899999986432 2245688999999999 89999999999975
Q ss_pred C-----CeEEEEecccccCcHHHHHHH
Q 004953 692 E-----GEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 692 ~-----~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
. +..++|+||+++|+|.+++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~ 117 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKG 117 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHH
Confidence 4 358999999999999887653
No 252
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.81 E-value=1.6e-08 Score=103.76 Aligned_cols=82 Identities=21% Similarity=0.370 Sum_probs=68.1
Q ss_pred eeecCCCeeEEEEEeC---CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCc
Q 004953 631 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLF 706 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l~---~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~ 706 (722)
.||+|+||.||+|.+. ++..||||.+..... ...++|.+|+.++.+++|+||++++|+|. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999863 355799999865432 23457999999999999999999999885 457899999999999
Q ss_pred HHHHHHH
Q 004953 707 IFQFSIK 713 (722)
Q Consensus 707 L~~~l~~ 713 (722)
|.+++..
T Consensus 81 L~~~l~~ 87 (257)
T cd05115 81 LNKFLSG 87 (257)
T ss_pred HHHHHHh
Confidence 9988753
No 253
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.81 E-value=1.4e-08 Score=107.94 Aligned_cols=88 Identities=15% Similarity=0.092 Sum_probs=71.9
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEec
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
|+..+.||+|+||+||++... +|+.||||+++... ....+.+..|.+++..+. |++|+++.+++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 566789999999999999864 68899999986431 122346888999998885 5778889999988899999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 y~~~g~L~~~i~~ 94 (323)
T cd05615 82 YVNGGDLMYHIQQ 94 (323)
T ss_pred CCCCCcHHHHHHH
Confidence 9999999887654
No 254
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.81 E-value=1.9e-08 Score=102.87 Aligned_cols=88 Identities=17% Similarity=0.184 Sum_probs=75.9
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||++.. .++..+|||.+.... ....+.|.+|++++++++|+||+++++.+..++..++|+||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 56678999999999999986 468899999986532 233467999999999999999999999999899999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++|+|.+++.+
T Consensus 82 ~~~~L~~~~~~ 92 (256)
T cd08220 82 PGGTLAEYIQK 92 (256)
T ss_pred CCCCHHHHHHH
Confidence 99999888765
No 255
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.80 E-value=1.3e-08 Score=107.93 Aligned_cols=90 Identities=19% Similarity=0.386 Sum_probs=75.3
Q ss_pred cCccCCCeeecCCCeeEEEEEeC--------CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
++|...+.||+|+||.||++... ....||+|.++... .....+|.+|++++.++ +|||||+++++|...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 45677899999999999999741 24579999987532 23345789999999999 6999999999999999
Q ss_pred eEEEEecccccCcHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++|+||+++|+|.+|+.+
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~ 111 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRA 111 (314)
T ss_pred ceEEEEecCCCCcHHHHHHh
Confidence 99999999999999998865
No 256
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.80 E-value=1.4e-08 Score=106.62 Aligned_cols=87 Identities=23% Similarity=0.370 Sum_probs=73.6
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh-----cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~-----~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
|+..+.||+|+||.||+|... +|+.||||.++..... ....+..|++++.+++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 566788999999999999964 5889999999654322 2345788999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+ +|+|.+++.+
T Consensus 82 e~~-~~~L~~~i~~ 94 (298)
T cd07841 82 EFM-ETDLEKVIKD 94 (298)
T ss_pred ccc-CCCHHHHHhc
Confidence 999 8999777643
No 257
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.80 E-value=1.6e-08 Score=103.80 Aligned_cols=87 Identities=25% Similarity=0.391 Sum_probs=73.6
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+|.....||+|+||.||++...++..||+|.+.... ...+.|.+|++++.+++|+|++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 466678899999999999998777789999886533 23457999999999999999999999874 5678999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 85 ~~L~~~~~~ 93 (260)
T cd05069 85 GSLLDFLKE 93 (260)
T ss_pred CCHHHHHhh
Confidence 999888754
No 258
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.80 E-value=1.8e-08 Score=103.12 Aligned_cols=85 Identities=35% Similarity=0.548 Sum_probs=74.5
Q ss_pred CeeecCCCeeEEEEEeCC----CcEEEEEEccCCChhc-HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~----g~~vAVK~l~~~~~~~-~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|.... +..||||.++...... .+.+.+|++.+.+++|+|++++++++...+..++|+||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999753 7889999997654333 56799999999999999999999999999999999999999
Q ss_pred CcHHHHHHHH
Q 004953 705 LFIFQFSIKL 714 (722)
Q Consensus 705 G~L~~~l~~~ 714 (722)
|+|.+++.+.
T Consensus 81 ~~L~~~l~~~ 90 (262)
T cd00192 81 GDLLDYLRKS 90 (262)
T ss_pred CcHHHHHhhc
Confidence 9999988764
No 259
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.80 E-value=1.2e-08 Score=104.48 Aligned_cols=88 Identities=17% Similarity=0.319 Sum_probs=75.1
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 566788999999999999975 58899999985432 223457889999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++.+
T Consensus 82 ~~~~L~~~~~~ 92 (257)
T cd08225 82 DGGDLMKRINR 92 (257)
T ss_pred CCCcHHHHHHh
Confidence 99999887654
No 260
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.80 E-value=1.8e-08 Score=107.21 Aligned_cols=89 Identities=15% Similarity=0.096 Sum_probs=72.4
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCC-cccceEEEEEeCCeEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~-Niv~l~g~~~~~~~~~Lv~ 699 (722)
+|...+.||+|+||.||+|... +++.||||.++... ....+.+..|++++..++|+ +|+++.+++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 3566789999999999999864 47899999986431 22345688999999999765 5888999998899999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++.+
T Consensus 81 E~~~~g~L~~~~~~ 94 (324)
T cd05587 81 EYVNGGDLMYHIQQ 94 (324)
T ss_pred cCCCCCcHHHHHHH
Confidence 99999999877643
No 261
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.79 E-value=1.8e-08 Score=104.65 Aligned_cols=89 Identities=26% Similarity=0.467 Sum_probs=73.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-Cc----EEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~----~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
.+|+..+.||+|+||.||+|...+ |. .||+|.++.... ....+|.+|+.++++++|+||++++|+|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 346667899999999999998642 33 689998865433 334679999999999999999999999987 78899
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
|+||+++|+|.+++.+
T Consensus 86 v~e~~~~g~L~~~l~~ 101 (279)
T cd05057 86 ITQLMPLGCLLDYVRN 101 (279)
T ss_pred EEecCCCCcHHHHHHh
Confidence 9999999999888754
No 262
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.79 E-value=2.1e-08 Score=102.83 Aligned_cols=82 Identities=26% Similarity=0.430 Sum_probs=68.3
Q ss_pred eeecCCCeeEEEEEe---CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 631 QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l---~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
.||+|+||.||+|.+ .++..||+|.++... ....++|.+|+.++.+++|+||++++|++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 357889999986443 223467999999999999999999999985 45678999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
+|.+++.+
T Consensus 81 ~L~~~l~~ 88 (257)
T cd05116 81 PLNKFLQK 88 (257)
T ss_pred cHHHHHHh
Confidence 99887754
No 263
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.79 E-value=2.2e-08 Score=103.50 Aligned_cols=86 Identities=24% Similarity=0.417 Sum_probs=69.0
Q ss_pred cCCCeeecCCCeeEEEEEeCC-Cc--EEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC------CeE
Q 004953 627 NSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GEQ 695 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~~-g~--~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~------~~~ 695 (722)
...+.||+|+||.||+|...+ +. .||||.++.. .....+.|..|++++.+++|+||++++|+|... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 345789999999999999754 33 5899988653 233346799999999999999999999998542 246
Q ss_pred EEEecccccCcHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~ 712 (722)
++++|||++|+|.+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~ 98 (272)
T cd05075 82 VVILPFMKHGDLHSFLL 98 (272)
T ss_pred EEEEEeCCCCcHHHHHH
Confidence 89999999999987763
No 264
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.79 E-value=2.1e-08 Score=103.89 Aligned_cols=88 Identities=23% Similarity=0.300 Sum_probs=75.0
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcC---CCcccceEEEEEeCCeEEEEec
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~---H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
|+..+.||+|+||.||+|.. .++..||||.++... ....+++.+|+.++++++ |||+++++|++...+..++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 55667899999999999996 568999999986542 233457889999999997 9999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++++|.+++++
T Consensus 83 ~~~~~~L~~~~~~ 95 (277)
T cd06917 83 YAEGGSVRTLMKA 95 (277)
T ss_pred cCCCCcHHHHHHc
Confidence 9999999887654
No 265
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.79 E-value=2.9e-08 Score=102.06 Aligned_cols=89 Identities=22% Similarity=0.240 Sum_probs=77.3
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|+||+||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+..++..++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 577788999999999999995 467899999986432 224567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++++
T Consensus 82 ~~~~l~~~~~~ 92 (267)
T cd06610 82 SGGSLLDIMKS 92 (267)
T ss_pred CCCcHHHHHHH
Confidence 99999888765
No 266
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.79 E-value=9.4e-09 Score=107.10 Aligned_cols=87 Identities=25% Similarity=0.364 Sum_probs=73.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|+||.||+|... .++.||+|++..... ...+.+.+|++++.+++|+||+++++++..++..++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 4667789999999999999975 488999998854322 2345688999999999999999999999999999999999
Q ss_pred cccCcHHHHH
Q 004953 702 YIYLFIFQFS 711 (722)
Q Consensus 702 ~~~G~L~~~l 711 (722)
++++.|.++.
T Consensus 82 ~~~~~l~~~~ 91 (286)
T cd07846 82 VDHTVLDDLE 91 (286)
T ss_pred CCccHHHHHH
Confidence 9998886553
No 267
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.78 E-value=2.3e-08 Score=105.10 Aligned_cols=89 Identities=22% Similarity=0.305 Sum_probs=73.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
++|...+.||+|+||.||+|... ++..||+|.++.... .....+.+|+.++.+++|+||+++++++..++..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 35677789999999999999864 578999999864322 2334678999999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
++ ++|.+++.+
T Consensus 86 ~~-~~l~~~l~~ 96 (301)
T cd07873 86 LD-KDLKQYLDD 96 (301)
T ss_pred cc-cCHHHHHHh
Confidence 98 578776543
No 268
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.78 E-value=7.4e-09 Score=109.86 Aligned_cols=92 Identities=21% Similarity=0.216 Sum_probs=78.0
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~L 697 (722)
..+|...++||+|+|.+||+|+- ..++.+|||++..... ...+-...|-++|.++ .||.||+|+..+.++...|.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 34677789999999999999984 5689999999864321 1223467888999999 99999999999999999999
Q ss_pred EecccccCcHHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~~ 714 (722)
|+||.++|+|.+++.++
T Consensus 152 vLe~A~nGdll~~i~K~ 168 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY 168 (604)
T ss_pred EEEecCCCcHHHHHHHh
Confidence 99999999999999885
No 269
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.78 E-value=2.1e-08 Score=104.75 Aligned_cols=89 Identities=22% Similarity=0.335 Sum_probs=74.5
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
++|+..+.||+|+||.||+|..+ +++.||||.+...... ....+.+|++++.+++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 45777789999999999999965 6889999998643222 234578899999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
++ ++|.+++.+
T Consensus 85 ~~-~~L~~~~~~ 95 (291)
T cd07844 85 LD-TDLKQYMDD 95 (291)
T ss_pred CC-CCHHHHHHh
Confidence 98 488777654
No 270
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.78 E-value=2.4e-08 Score=106.67 Aligned_cols=88 Identities=24% Similarity=0.225 Sum_probs=72.9
Q ss_pred ccCCCeeecCCCeeEEEEEe----CCCcEEEEEEccCCC----hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l----~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~ 696 (722)
|...+.||+|+||.||+++. .++..||+|.++... ....+.+..|+.++.++ +|+||+++.+++..++..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 55678899999999999874 357899999986421 12234688999999999 5999999999999999999
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+||||+++|+|.+++.+
T Consensus 82 lv~e~~~~g~L~~~l~~ 98 (332)
T cd05614 82 LILDYVSGGEMFTHLYQ 98 (332)
T ss_pred EEEeCCCCCcHHHHHHH
Confidence 99999999999887653
No 271
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.78 E-value=9e-09 Score=105.51 Aligned_cols=89 Identities=22% Similarity=0.217 Sum_probs=76.2
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||++... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 3566789999999999999975 58899999986432 1334679999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++++|.+++.+
T Consensus 81 ~~~~~~L~~~l~~ 93 (258)
T cd05578 81 LLLGGDLRYHLSQ 93 (258)
T ss_pred CCCCCCHHHHHHh
Confidence 9999999887654
No 272
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.78 E-value=1.2e-08 Score=114.60 Aligned_cols=90 Identities=20% Similarity=0.243 Sum_probs=74.7
Q ss_pred CccCCCeeecCCCeeEEEEEeCCC-cEEEEEEccCCChhcHHHHHHHHHHHHhcC-CCcccceEE-EEEe---C---CeE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVG-YCDE---E---GEQ 695 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g-~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~Niv~l~g-~~~~---~---~~~ 695 (722)
+....+.|.+|||+.||.+....+ ..+|+|++-.....+.+...+||++|++++ |+|||.+++ .... . -+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345568999999999999997665 999999986666666778999999999997 999999999 3332 1 268
Q ss_pred EEEecccccCcHHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~~ 714 (722)
+|.||||++|.|.||+.+.
T Consensus 118 llLmEyC~gg~Lvd~mn~R 136 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTR 136 (738)
T ss_pred EeehhhccCCcHHHHHHHH
Confidence 9999999999999987753
No 273
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.78 E-value=2.2e-08 Score=104.29 Aligned_cols=87 Identities=28% Similarity=0.402 Sum_probs=73.4
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+....||+|+||.||+|... +|+.||+|++.... ....+.|.+|++++.+++|+|++++++++...+..++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 4667789999999999999975 58899999885432 12235688999999999999999999999999999999999
Q ss_pred cccCcHHHHH
Q 004953 702 YIYLFIFQFS 711 (722)
Q Consensus 702 ~~~G~L~~~l 711 (722)
++++.|..+.
T Consensus 82 ~~~~~l~~~~ 91 (286)
T cd07847 82 CDHTVLNELE 91 (286)
T ss_pred cCccHHHHHH
Confidence 9998876553
No 274
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.78 E-value=2.2e-08 Score=102.77 Aligned_cols=84 Identities=30% Similarity=0.413 Sum_probs=68.8
Q ss_pred CeeecCCCeeEEEEEeC----CCcEEEEEEccCC-ChhcHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeEEEEecccc
Q 004953 630 TQIGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQVLPLKLYI 703 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~----~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~~~~Lv~ey~~ 703 (722)
+.||+|+||.||+|... ++..||+|++... .....+.|.+|+.++++++||||++++|+|.. ++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999998543 23345679999999999999999999998864 556899999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 81 ~~~L~~~~~~ 90 (262)
T cd05058 81 HGDLRNFIRS 90 (262)
T ss_pred CCCHHHHHHh
Confidence 9999888654
No 275
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.78 E-value=1.2e-08 Score=113.28 Aligned_cols=92 Identities=16% Similarity=0.284 Sum_probs=70.0
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe-----------------CCCcEEEEEEccCCChhcHHH--------------HHHH
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL-----------------PDGTVVAVKRAQEGSLQGEKE--------------FLTE 670 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l-----------------~~g~~vAVK~l~~~~~~~~~~--------------f~~E 670 (722)
..++|+..+.||+|+||.||+|.. .+++.||||+++.......++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999986543222223 4457
Q ss_pred HHHHHhcCCCcc-----cceEEEEEe--------CCeEEEEecccccCcHHHHHHH
Q 004953 671 IQFLSRLHHRNL-----VSLVGYCDE--------EGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 671 ~~~l~~l~H~Ni-----v~l~g~~~~--------~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
+.++.+++|.++ ++++|||.. .+..+||||||++|+|.+++..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~ 278 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG 278 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence 778888877765 788888864 3578999999999999888753
No 276
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.77 E-value=1.8e-08 Score=103.65 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=77.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+++.+|++++++++||||+++++++...+..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4556678999999999999975 58899999986543 234567999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHH
Q 004953 703 IYLFIFQFSIKL 714 (722)
Q Consensus 703 ~~G~L~~~l~~~ 714 (722)
++++|.+++.+.
T Consensus 82 ~~~~L~~~~~~~ 93 (265)
T cd06605 82 DGGSLDKILKEV 93 (265)
T ss_pred CCCcHHHHHHHc
Confidence 999998887653
No 277
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.77 E-value=3.1e-08 Score=102.18 Aligned_cols=89 Identities=17% Similarity=0.228 Sum_probs=72.6
Q ss_pred CccCCCeeecCCCeeEEEEEeCC--CcEEEEEEccCCC----------hhcHHHHHHHHHHHHh-cCCCcccceEEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS----------LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE 691 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~--g~~vAVK~l~~~~----------~~~~~~f~~E~~~l~~-l~H~Niv~l~g~~~~ 691 (722)
+|+..+.||+|+||.||+|.... +..+|||.+.... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36667889999999999999754 6789999875321 1122457889988875 799999999999999
Q ss_pred CCeEEEEecccccCcHHHHHHH
Q 004953 692 EGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 692 ~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
++..++||||+++++|.+++..
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~ 102 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNS 102 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHH
Confidence 9999999999999999877644
No 278
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.77 E-value=2.7e-08 Score=106.07 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=70.3
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||++... +++.||||+++.... ...+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999864 578999999975322 2234588999999988 699999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~~~~ 89 (327)
T cd05617 81 GDLMFHMQR 89 (327)
T ss_pred CcHHHHHHH
Confidence 999776543
No 279
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.77 E-value=1.3e-08 Score=106.79 Aligned_cols=84 Identities=19% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 629 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
...||+|+||.||++.. .++..||+|.++.......+.+.+|+.++.+++||||+++++++..++..++|+||+++|+|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 45799999999999986 46889999998654444456789999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 004953 708 FQFSI 712 (722)
Q Consensus 708 ~~~l~ 712 (722)
.+++.
T Consensus 106 ~~~~~ 110 (297)
T cd06659 106 TDIVS 110 (297)
T ss_pred HHHHh
Confidence 76653
No 280
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.77 E-value=3.8e-08 Score=101.42 Aligned_cols=90 Identities=22% Similarity=0.266 Sum_probs=73.6
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-----hhcHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 695 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~ 695 (722)
.+|...+.||+|+||.||+|.. .++..||+|++.... .+..+.+.+|+.++++++|+||+++++++.. ++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3677889999999999999986 458899999885321 1223468899999999999999999999875 3567
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++++||+++++|.+++.+
T Consensus 82 ~l~~e~~~~~~L~~~l~~ 99 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA 99 (266)
T ss_pred EEEEeCCCCCcHHHHHHH
Confidence 899999999999877643
No 281
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.77 E-value=1.2e-08 Score=109.14 Aligned_cols=91 Identities=25% Similarity=0.441 Sum_probs=74.6
Q ss_pred cCccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEEEEeC-Ce
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE-GE 694 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~-~~ 694 (722)
++|...+.||+|+||.||+|... .++.||+|+++.... ...+.+.+|+.++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 45777899999999999999742 247899999875432 2335688999999999 899999999998754 56
Q ss_pred EEEEecccccCcHHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~~ 714 (722)
.++++||+++|+|.+++...
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~ 106 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSK 106 (337)
T ss_pred EEEEEecCCCCCHHHHHHhc
Confidence 88999999999999998753
No 282
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.77 E-value=2.7e-08 Score=105.54 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=69.1
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|+.. +|..||||.++... ....+.+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999964 58899999986431 12234577788888765 999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 g~L~~~i~~ 89 (316)
T cd05620 81 GDLMFHIQD 89 (316)
T ss_pred CcHHHHHHH
Confidence 999877644
No 283
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=98.77 E-value=8.7e-09 Score=106.02 Aligned_cols=88 Identities=25% Similarity=0.226 Sum_probs=74.5
Q ss_pred ccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChh---cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|...+.+|.|..|+||.+++++ +..+|+|++...... .......|-+||+.++||-++.|++.+.++...++||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 4445789999999999999865 588999999754332 234577899999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
|+||+|...+++
T Consensus 159 CpGGdL~~Lrqk 170 (459)
T KOG0610|consen 159 CPGGDLHSLRQK 170 (459)
T ss_pred CCCccHHHHHhh
Confidence 999999877665
No 284
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.77 E-value=3.5e-08 Score=102.69 Aligned_cols=87 Identities=26% Similarity=0.338 Sum_probs=71.5
Q ss_pred cCCCeeecCCCeeEEEEEe-----CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEE
Q 004953 627 NSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVLP 698 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l-----~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~Lv 698 (722)
+..+.||+|+||+||.+.. .++..||+|.++.... ...+.|.+|++++++++||||+++.++|... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5678899999999988653 3578999999875432 3346799999999999999999999998763 458899
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++.+
T Consensus 87 ~e~~~~~~l~~~~~~ 101 (283)
T cd05080 87 MEYVPLGSLRDYLPK 101 (283)
T ss_pred ecCCCCCCHHHHHHH
Confidence 999999999887654
No 285
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.76 E-value=3e-08 Score=103.18 Aligned_cols=87 Identities=28% Similarity=0.401 Sum_probs=72.6
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|...+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+.++.+++||||+++++++..++..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 566788999999999999964 68899999986432 222357889999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
+ |+|.+++.+
T Consensus 82 ~-~~l~~~~~~ 91 (285)
T cd07861 82 S-MDLKKYLDS 91 (285)
T ss_pred C-CCHHHHHhc
Confidence 8 677666543
No 286
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.76 E-value=2.8e-08 Score=105.22 Aligned_cols=89 Identities=24% Similarity=0.297 Sum_probs=76.7
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh---cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+|+..+.||+|+||.||++... ++..||+|.+...... ..+.+..|++++.+++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5677789999999999999865 4899999998654322 34568999999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~~~~L~~~~~~ 94 (316)
T cd05574 82 YCPGGELFRLLQR 94 (316)
T ss_pred ecCCCCHHHHHHh
Confidence 9999999887653
No 287
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.76 E-value=2.6e-08 Score=105.90 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=72.5
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+|...+.||+|+||+||+|... ++..||||.++... ....+.+..|.+++... +|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 3666789999999999999864 57899999986432 12234577888888887 6899999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++|+|.+++.+
T Consensus 81 E~~~~g~L~~~~~~ 94 (323)
T cd05616 81 EYVNGGDLMYQIQQ 94 (323)
T ss_pred cCCCCCCHHHHHHH
Confidence 99999999877644
No 288
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.76 E-value=2e-08 Score=109.12 Aligned_cols=85 Identities=22% Similarity=0.318 Sum_probs=70.4
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQV 696 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~~ 696 (722)
+|+..+.||+|+||.||++.. .+|+.||||++... .....+.+.+|++++..++|+||+++++++..++ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 467788999999999999985 46899999998643 2233457899999999999999999999998776 789
Q ss_pred EEecccccCcHHHH
Q 004953 697 LPLKLYIYLFIFQF 710 (722)
Q Consensus 697 Lv~ey~~~G~L~~~ 710 (722)
+|+||+. ++|.++
T Consensus 81 lv~e~~~-~~l~~~ 93 (372)
T cd07853 81 VVTELMQ-SDLHKI 93 (372)
T ss_pred EEeeccc-cCHHHH
Confidence 9999997 466554
No 289
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.76 E-value=3e-09 Score=113.21 Aligned_cols=87 Identities=25% Similarity=0.389 Sum_probs=72.4
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhc---HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~---~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|...+.||.|+||.||-+.- .+...||||++...+.+. ..+...|++.|.+++|||.|...|||..+...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55557899999999999984 567899999997665543 35688999999999999999999999999999999999
Q ss_pred cccC--cHHHHHH
Q 004953 702 YIYL--FIFQFSI 712 (722)
Q Consensus 702 ~~~G--~L~~~l~ 712 (722)
|-|- ||.+..+
T Consensus 108 ClGSAsDlleVhk 120 (948)
T KOG0577|consen 108 CLGSASDLLEVHK 120 (948)
T ss_pred HhccHHHHHHHHh
Confidence 9874 5544433
No 290
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.76 E-value=1.9e-08 Score=107.54 Aligned_cols=89 Identities=17% Similarity=0.356 Sum_probs=74.6
Q ss_pred CccCCCeeecCCCeeEEEEEeC--------CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~ 694 (722)
+|...+.||+|+||.||++... .+..||+|.++... ....++|.+|++++.++ +|+||++++++|..++.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 4667789999999999999742 12378999886532 23346799999999999 89999999999999999
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++++||+++|+|.+++.+
T Consensus 93 ~~lv~e~~~~g~L~~~l~~ 111 (334)
T cd05100 93 LYVLVEYASKGNLREYLRA 111 (334)
T ss_pred eEEEEecCCCCcHHHHHHh
Confidence 9999999999999998764
No 291
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.76 E-value=2.8e-08 Score=115.83 Aligned_cols=89 Identities=19% Similarity=0.186 Sum_probs=76.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|...+.||+|+||+||+|... +++.||||+++.... ...+.+.+|+.++..++|+|||++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 46777889999999999999975 588999999864322 22356899999999999999999999999999999999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
||+++|+|.+++.
T Consensus 84 Ey~~g~~L~~li~ 96 (669)
T cd05610 84 EYLIGGDVKSLLH 96 (669)
T ss_pred eCCCCCCHHHHHH
Confidence 9999999988764
No 292
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.76 E-value=3e-08 Score=103.18 Aligned_cols=87 Identities=22% Similarity=0.215 Sum_probs=74.5
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||+|.. .+|..||||++.... ....+.|.+|+.++.+++|+||+++++++..++..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 55668899999999999996 468999999986543 223457999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
+++|.+++.+
T Consensus 82 -~~~L~~~~~~ 91 (286)
T cd07832 82 -PSDLSEVLRD 91 (286)
T ss_pred -CCCHHHHHHh
Confidence 9999887643
No 293
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.76 E-value=2.7e-08 Score=103.45 Aligned_cols=88 Identities=25% Similarity=0.382 Sum_probs=74.0
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|+..+.||+|++|.||+|+.. +|..||||.++.... ...+.+.+|++++.+++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 3667789999999999999974 588999999865432 23456788999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++ +|.+++.+
T Consensus 81 ~~-~l~~~~~~ 90 (284)
T cd07836 81 DK-DLKKYMDT 90 (284)
T ss_pred Cc-cHHHHHHh
Confidence 84 78776543
No 294
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.76 E-value=1.6e-08 Score=105.21 Aligned_cols=87 Identities=28% Similarity=0.394 Sum_probs=73.1
Q ss_pred ccCCCeeecCCCeeEEEEEeC------CCcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
|...+.||+|+||.||+|... ++..||||+++..... ..+.|.+|+.++.+++|||||+++|++...+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 444578999999999999853 2478999999754332 235689999999999999999999999999999999
Q ss_pred ecccccCcHHHHHH
Q 004953 699 LKLYIYLFIFQFSI 712 (722)
Q Consensus 699 ~ey~~~G~L~~~l~ 712 (722)
+||+++++|.+++.
T Consensus 87 ~e~~~~~~l~~~l~ 100 (283)
T cd05091 87 FSYCSHSDLHEFLV 100 (283)
T ss_pred EEcCCCCcHHHHHH
Confidence 99999999988874
No 295
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.75 E-value=4.3e-08 Score=99.97 Aligned_cols=88 Identities=24% Similarity=0.318 Sum_probs=76.5
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEEec
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVLPLK 700 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~Lv~e 700 (722)
|+..+.||+|++|.||+|... ++..|++|.+..... ...+.+.+|++++++++|+||+++++++... +..++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 566789999999999999975 688999999865432 3456799999999999999999999999988 88999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++++|.+++.+
T Consensus 82 ~~~~~~L~~~~~~ 94 (260)
T cd06606 82 YVSGGSLSSLLKK 94 (260)
T ss_pred ecCCCcHHHHHHH
Confidence 9999999887654
No 296
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.75 E-value=3e-08 Score=102.95 Aligned_cols=82 Identities=23% Similarity=0.317 Sum_probs=69.9
Q ss_pred eecCCCeeEEEEEe-CCCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||+|+||+||++.. .+|+.||+|.+.... ......|..|++++.+++||||+++.+++...+..++|+||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999985 468899999986432 12234578999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 004953 708 FQFSIK 713 (722)
Q Consensus 708 ~~~l~~ 713 (722)
.+++.+
T Consensus 81 ~~~l~~ 86 (277)
T cd05577 81 KYHIYN 86 (277)
T ss_pred HHHHHH
Confidence 887755
No 297
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.75 E-value=1.3e-08 Score=106.61 Aligned_cols=84 Identities=20% Similarity=0.214 Sum_probs=73.3
Q ss_pred CCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 629 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
...||+|+||.||++.. .++..||||++........+.+.+|+.++.+++|+||+++++++..++..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35699999999999986 45889999998655445556799999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 004953 708 FQFSI 712 (722)
Q Consensus 708 ~~~l~ 712 (722)
.+++.
T Consensus 107 ~~~~~ 111 (292)
T cd06658 107 TDIVT 111 (292)
T ss_pred HHHHh
Confidence 87753
No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.75 E-value=3.1e-08 Score=104.54 Aligned_cols=87 Identities=23% Similarity=0.333 Sum_probs=72.1
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
..|+..+.||+|+||+||+|... +|+.||+|.+.... ....+++.+|++++.+++||||+++.|+|...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34777789999999999999864 58899999885432 223357899999999999999999999999999999999
Q ss_pred cccccCcHHHHH
Q 004953 700 KLYIYLFIFQFS 711 (722)
Q Consensus 700 ey~~~G~L~~~l 711 (722)
||++ |++.+++
T Consensus 95 e~~~-g~l~~~~ 105 (307)
T cd06607 95 EYCL-GSASDIL 105 (307)
T ss_pred HhhC-CCHHHHH
Confidence 9997 5555544
No 299
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=8.8e-09 Score=108.03 Aligned_cols=94 Identities=21% Similarity=0.252 Sum_probs=78.8
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhc--HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~--~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
-|+.++.||+|.|..|-.+.. =.|..||||++....... .....+|++.|+-++|||||+|+....+....|||+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 356678899999999987762 379999999997543322 23578899999999999999999999999999999999
Q ss_pred cccCcHHHHHHHHHhhh
Q 004953 702 YIYLFIFQFSIKLIFAI 718 (722)
Q Consensus 702 ~~~G~L~~~l~~~~~~~ 718 (722)
-.+|+|+||+.++-.|+
T Consensus 99 GD~GDl~DyImKHe~Gl 115 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEGL 115 (864)
T ss_pred cCCchHHHHHHhhhccc
Confidence 99999999998866554
No 300
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.75 E-value=2.6e-08 Score=116.75 Aligned_cols=92 Identities=14% Similarity=0.198 Sum_probs=75.9
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEE
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQV 696 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~~ 696 (722)
..++|...+.||+|+||+||++... .+..||+|.+.... ......|..|+.++.+++|||||++++++.. .+..+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4457888899999999999999864 57789999886432 2334579999999999999999999998865 35689
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+||||+++|+|.+++.+
T Consensus 91 IVMEY~~gGSL~~lL~k 107 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQK 107 (1021)
T ss_pred EEEeCCCCCcHHHHHHH
Confidence 99999999999887754
No 301
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.75 E-value=2.7e-08 Score=106.42 Aligned_cols=86 Identities=23% Similarity=0.327 Sum_probs=69.1
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQVL 697 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~~L 697 (722)
|+..+.||+|+||.||+|.. .+|..||||+++... ......+.+|++++.+++|||||++++++...+ ..++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 55668899999999999985 468999999986432 223456899999999999999999999986532 4799
Q ss_pred EecccccCcHHHHHH
Q 004953 698 PLKLYIYLFIFQFSI 712 (722)
Q Consensus 698 v~ey~~~G~L~~~l~ 712 (722)
|||||+ ++|.+++.
T Consensus 82 v~e~~~-~~L~~~l~ 95 (338)
T cd07859 82 VFELME-SDLHQVIK 95 (338)
T ss_pred EEecCC-CCHHHHHH
Confidence 999996 67876654
No 302
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.74 E-value=3.6e-08 Score=103.25 Aligned_cols=82 Identities=20% Similarity=0.252 Sum_probs=72.4
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHH
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
..||+|+||.||++.. .+|..||||++..........+.+|+.++++++|+|++++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5699999999999986 468999999986544445567999999999999999999999999999999999999999997
Q ss_pred HHH
Q 004953 709 QFS 711 (722)
Q Consensus 709 ~~l 711 (722)
+++
T Consensus 106 ~~~ 108 (292)
T cd06657 106 DIV 108 (292)
T ss_pred HHH
Confidence 765
No 303
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.74 E-value=3e-08 Score=103.73 Aligned_cols=90 Identities=24% Similarity=0.340 Sum_probs=74.6
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++.+|...+.||+|+||.||+|.. .+|..||+|.+..... +....+.+|+.++.+++|+||+++.+++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 356788889999999999999986 4688999999864432 22346789999999999999999999999999999999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
||+. +++.+++.
T Consensus 83 e~~~-~~l~~~~~ 94 (291)
T cd07870 83 EYMH-TDLAQYMI 94 (291)
T ss_pred eccc-CCHHHHHH
Confidence 9996 67766543
No 304
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.74 E-value=3.6e-09 Score=109.56 Aligned_cols=88 Identities=20% Similarity=0.232 Sum_probs=75.9
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.|...+.||+|+||.||||.. ..++.||+|.+.-... ...++..+|+.++++.+|+||.+.+|.+..+...+++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 455668899999999999985 4588999999975433 33467899999999999999999999999999999999999
Q ss_pred ccCcHHHHHH
Q 004953 703 IYLFIFQFSI 712 (722)
Q Consensus 703 ~~G~L~~~l~ 712 (722)
.+|++.+.++
T Consensus 94 ~gGsv~~lL~ 103 (467)
T KOG0201|consen 94 GGGSVLDLLK 103 (467)
T ss_pred cCcchhhhhc
Confidence 9999977654
No 305
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.74 E-value=4.4e-08 Score=102.16 Aligned_cols=88 Identities=18% Similarity=0.208 Sum_probs=75.6
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
|...+.||+|++|.||++.. .++..||+|+++.......+.+.+|+.++.+++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44457999999999999985 46889999998655444456789999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
++|.+++.+
T Consensus 101 ~~L~~~~~~ 109 (285)
T cd06648 101 GALTDIVTH 109 (285)
T ss_pred CCHHHHHHh
Confidence 999877644
No 306
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.74 E-value=5.2e-08 Score=100.28 Aligned_cols=90 Identities=21% Similarity=0.241 Sum_probs=73.9
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC-----ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~ 695 (722)
.+|...+.||+|+||.||+|.. .+|..||+|.+... ..+..+.|.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4677889999999999999985 45899999987432 122335789999999999999999999998764 467
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++|+||+++++|.+++.+
T Consensus 82 ~~v~e~~~~~~L~~~~~~ 99 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA 99 (264)
T ss_pred EEEEEeCCCCcHHHHHHH
Confidence 899999999999887653
No 307
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.74 E-value=3.8e-08 Score=100.74 Aligned_cols=86 Identities=27% Similarity=0.407 Sum_probs=73.0
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeEEEEecccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQVLPLKLYI 703 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~~~~Lv~ey~~ 703 (722)
+|...+.||+|+||.||++.. .|..||+|..+... ..+.|.+|+.++++++|+|+++++|++.. ++..++|+||++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred hCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 567778999999999999987 47889999986432 24579999999999999999999998754 567899999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++++
T Consensus 84 ~~~L~~~~~~ 93 (256)
T cd05082 84 KGSLVDYLRS 93 (256)
T ss_pred CCcHHHHHHh
Confidence 9999888754
No 308
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.74 E-value=3e-08 Score=101.58 Aligned_cols=86 Identities=26% Similarity=0.416 Sum_probs=73.1
Q ss_pred cCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChhcH--HHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 627 NSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGE--KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~~--~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+..+.||+|+||+||++.... ++.||+|.+........ ....+|+.++.+++||||+++++++...+..++||||++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~ 81 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence 345789999999999999754 66899999976644332 234669999999999999999999999999999999999
Q ss_pred cCcHHHHHH
Q 004953 704 YLFIFQFSI 712 (722)
Q Consensus 704 ~G~L~~~l~ 712 (722)
+|+|.+++.
T Consensus 82 ~~~L~~~l~ 90 (260)
T PF00069_consen 82 GGSLQDYLQ 90 (260)
T ss_dssp TEBHHHHHH
T ss_pred ccccccccc
Confidence 999988876
No 309
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.73 E-value=4.2e-08 Score=100.50 Aligned_cols=83 Identities=30% Similarity=0.530 Sum_probs=68.9
Q ss_pred CeeecCCCeeEEEEEeCC----CcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~----g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|.+.. +..||+|.+..... ...+++.+|+.++.+++|+|||++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 468999999999998532 26899999875443 34567999999999999999999999875 4568999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 80 ~~L~~~l~~ 88 (257)
T cd05060 80 GPLLKYLKK 88 (257)
T ss_pred CcHHHHHHh
Confidence 999888754
No 310
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.73 E-value=3.9e-08 Score=102.25 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=70.3
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-hhcHHHHHHHHHH-HHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~-l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|+||.||++... +|..||+|+++... .....++..|+.+ ++..+|+|||++++++..++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 5677789999999999999864 58999999986542 2234566677776 5566999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
|+ |+|.+++++
T Consensus 82 ~~-~~l~~~l~~ 92 (283)
T cd06617 82 MD-TSLDKFYKK 92 (283)
T ss_pred hc-ccHHHHHHH
Confidence 97 667665543
No 311
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.73 E-value=4.2e-08 Score=104.50 Aligned_cols=84 Identities=24% Similarity=0.243 Sum_probs=66.7
Q ss_pred CeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHH-HHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||+||++... ++..||+|.+.... ......+..|.. ++..++|+|||++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999864 57889999986421 122234555544 56788999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 ~~L~~~~~~ 89 (325)
T cd05602 81 GELFYHLQR 89 (325)
T ss_pred CcHHHHHHh
Confidence 999877643
No 312
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.73 E-value=2.3e-09 Score=105.20 Aligned_cols=86 Identities=21% Similarity=0.316 Sum_probs=75.3
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
|+....+|+|+||.|||+.. ..|..||+|++.-. .+..+...|+.+|.+.+.+.+|+.+|.|......++|||||.-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 55567899999999999985 46999999998643 3457899999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|++.|.+|-
T Consensus 113 GSiSDI~R~ 121 (502)
T KOG0574|consen 113 GSISDIMRA 121 (502)
T ss_pred CcHHHHHHH
Confidence 999876554
No 313
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.73 E-value=2.5e-08 Score=103.81 Aligned_cols=87 Identities=30% Similarity=0.423 Sum_probs=72.4
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|+||.||+|+.. +|..||||+++.... ...+.+.+|++++.+++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 3667789999999999999864 688999999864322 2235789999999999999999999999999999999999
Q ss_pred cccCcHHHHHH
Q 004953 702 YIYLFIFQFSI 712 (722)
Q Consensus 702 ~~~G~L~~~l~ 712 (722)
+. ++|.+++.
T Consensus 81 ~~-~~l~~~~~ 90 (284)
T cd07860 81 LH-QDLKKFMD 90 (284)
T ss_pred cc-cCHHHHHH
Confidence 96 56766543
No 314
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.73 E-value=6.2e-08 Score=98.38 Aligned_cols=88 Identities=26% Similarity=0.378 Sum_probs=77.6
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
|+..+.||+|++|.||++... ++..+++|++........+.+.+|++.+++++|+|++++++++...+..++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 556788999999999999975 6889999999765544557899999999999999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
++|.+++.+
T Consensus 82 ~~L~~~~~~ 90 (253)
T cd05122 82 GSLKDLLKS 90 (253)
T ss_pred CcHHHHHhh
Confidence 999887654
No 315
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.73 E-value=1.8e-08 Score=102.42 Aligned_cols=95 Identities=27% Similarity=0.400 Sum_probs=75.8
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCc-ccceEEEEEeCC------eE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEG------EQ 695 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~N-iv~l~g~~~~~~------~~ 695 (722)
|...+.||+|.||+||+|.. .+|+.||+|+++.... .....-.+|+.++.+++|+| ||+|.+++.+.+ ..
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l 92 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL 92 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence 44456799999999999984 5789999999965433 22345689999999999999 999999999877 78
Q ss_pred EEEeccccc---------------C---cHHHHHHHHHhhhcc
Q 004953 696 VLPLKLYIY---------------L---FIFQFSIKLIFAIAM 720 (722)
Q Consensus 696 ~Lv~ey~~~---------------G---~L~~~l~~~~~~~a~ 720 (722)
++|+||+.. + ....+.+|+..|+|+
T Consensus 93 ~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 93 YLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred EEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 899999853 1 256777888887765
No 316
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.72 E-value=4.2e-08 Score=102.54 Aligned_cols=88 Identities=23% Similarity=0.243 Sum_probs=73.9
Q ss_pred ccCCCeeecCCCeeEEEEEe----CCCcEEEEEEccCCCh----hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l----~~g~~vAVK~l~~~~~----~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~ 696 (722)
|+..+.||+|+||.||++.. .+|..||+|+++.... ...+.+.+|+.++.++ +|+||+++.+++..++..+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 55678899999999999985 3688999999864322 2235688999999999 6999999999998888999
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+|+||+++|+|.+++.+
T Consensus 82 lv~e~~~~~~L~~~l~~ 98 (290)
T cd05613 82 LILDYINGGELFTHLSQ 98 (290)
T ss_pred EEEecCCCCcHHHHHHH
Confidence 99999999999888654
No 317
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.72 E-value=5.9e-10 Score=106.58 Aligned_cols=85 Identities=22% Similarity=0.312 Sum_probs=71.4
Q ss_pred CccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
.|+..++||+|.|+.||++. -+.|+.+|+|.+... ...+.++..+|+++...++|||||+|...+.+++..++|+|+
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 45556789999999999987 467888888877532 222456788999999999999999999999999999999999
Q ss_pred cccCcHHH
Q 004953 702 YIYLFIFQ 709 (722)
Q Consensus 702 ~~~G~L~~ 709 (722)
|++|+|..
T Consensus 92 m~G~dl~~ 99 (355)
T KOG0033|consen 92 VTGGELFE 99 (355)
T ss_pred ccchHHHH
Confidence 99999943
No 318
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.72 E-value=6.7e-08 Score=98.47 Aligned_cols=88 Identities=27% Similarity=0.426 Sum_probs=75.8
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|++|.||++... ++..||+|.+..... ...+.+.+|++++.+++|+|++++++++..++..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 556789999999999999864 578999999876543 33457999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++.+
T Consensus 82 ~~~~L~~~~~~ 92 (254)
T cd06627 82 ENGSLRQIIKK 92 (254)
T ss_pred CCCcHHHHHHh
Confidence 99999877643
No 319
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.72 E-value=3.7e-08 Score=102.39 Aligned_cols=88 Identities=26% Similarity=0.355 Sum_probs=70.1
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCc----EEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~----~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv 698 (722)
+|...+.||+|+||.||+|.+. +|. .||+|.+..... ...+++..|+.++++++|||||+++|++. ....+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence 4666789999999999999863 344 478888754322 23357888999999999999999999985 4557889
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
+||+++|+|.+++.+
T Consensus 87 ~e~~~~gsL~~~l~~ 101 (279)
T cd05111 87 TQLSPLGSLLDHVRQ 101 (279)
T ss_pred EEeCCCCcHHHHHHh
Confidence 999999999988754
No 320
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.72 E-value=4.6e-08 Score=100.50 Aligned_cols=82 Identities=15% Similarity=0.236 Sum_probs=71.2
Q ss_pred eecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||.|+||.||++... .++.||+|.+..... ...+.+.+|+.++.+++|+||+++++++.+++..++|+||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 488999999864322 2345799999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 004953 708 FQFSIK 713 (722)
Q Consensus 708 ~~~l~~ 713 (722)
.+++.+
T Consensus 81 ~~~l~~ 86 (262)
T cd05572 81 WTILRD 86 (262)
T ss_pred HHHHhh
Confidence 888765
No 321
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.71 E-value=3.1e-08 Score=101.25 Aligned_cols=85 Identities=28% Similarity=0.435 Sum_probs=72.1
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+|...+.||+|+||.||+|.. .+..||+|..+... ..+.|.+|+.++.+++|||++++++++... ..++||||+++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 466778999999999999985 67889999986432 235799999999999999999999998654 57899999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++++
T Consensus 83 ~~L~~~l~~ 91 (254)
T cd05083 83 GNLVNFLRT 91 (254)
T ss_pred CCHHHHHHh
Confidence 999888764
No 322
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.71 E-value=4.1e-08 Score=102.11 Aligned_cols=99 Identities=23% Similarity=0.355 Sum_probs=80.8
Q ss_pred ccHHHHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEe
Q 004953 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (722)
Q Consensus 614 ~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~ 691 (722)
.+..++..+.+.|+..+.||+|+||+||+|.. .++..||+|...... ....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 35556666778888889999999999999996 458899999885432 2345688999999998 79999999999863
Q ss_pred ------CCeEEEEecccccCcHHHHHHH
Q 004953 692 ------EGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 692 ------~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
.+..+++|||+++|+|.+++.+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 112 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKN 112 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHH
Confidence 4578999999999999887754
No 323
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.71 E-value=6.2e-08 Score=99.35 Aligned_cols=88 Identities=20% Similarity=0.300 Sum_probs=72.7
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEEEEec
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQVLPLK 700 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~~Lv~e 700 (722)
|+..+.+|+|+||.||++.. .+|..||+|.++... ....+.+.+|++++++++|+||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 55668899999999999985 468899999986432 2334568999999999999999999998864 346799999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
|+++|+|.+++.+
T Consensus 82 ~~~~~~L~~~l~~ 94 (265)
T cd08217 82 YCEGGDLAQLIQK 94 (265)
T ss_pred hccCCCHHHHHHH
Confidence 9999999888754
No 324
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.71 E-value=3.7e-08 Score=109.28 Aligned_cols=84 Identities=20% Similarity=0.336 Sum_probs=65.6
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--------C
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------G 693 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--------~ 693 (722)
..+|...+.||+|+||.||+|.. ..++.||||++.... ....+|+.+|.+++|||||++.+++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 34677889999999999999986 458899999885322 2345799999999999999999987542 2
Q ss_pred eEEEEecccccCcHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l 711 (722)
..++||||+++ ++.+++
T Consensus 141 ~l~lvmE~~~~-~l~~~~ 157 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYM 157 (440)
T ss_pred EEEEEEecCCc-cHHHHH
Confidence 46789999985 555443
No 325
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.70 E-value=1.1e-08 Score=101.66 Aligned_cols=94 Identities=17% Similarity=0.286 Sum_probs=80.8
Q ss_pred cHHHHHHhhcCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeC
Q 004953 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (722)
Q Consensus 615 ~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~ 692 (722)
+|+|+..-|+ +++|+|+|+.|-.++ +..|..+|||.+.......+....+|++++.+. .|+||++|+.++.++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 5677777664 679999999999887 678999999999765444556788999999988 799999999999999
Q ss_pred CeEEEEecccccCcHHHHHHH
Q 004953 693 GEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
...|||||-|.+|.|.+++.+
T Consensus 149 ~~FYLVfEKm~GGplLshI~~ 169 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQK 169 (463)
T ss_pred ceEEEEEecccCchHHHHHHH
Confidence 999999999999999888665
No 326
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.70 E-value=3.5e-08 Score=111.04 Aligned_cols=93 Identities=17% Similarity=0.051 Sum_probs=75.8
Q ss_pred HhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC----
Q 004953 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 693 (722)
Q Consensus 621 ~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~---- 693 (722)
...++|...+.||+|+||+||++.. .+|+.||||+++... ......+.+|+.++..++|+|+|++...+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3446788889999999999999984 568999999986532 233456889999999999999999988775432
Q ss_pred ----eEEEEecccccCcHHHHHHH
Q 004953 694 ----EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 ----~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++||||+++|+|.+++++
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~ 132 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKS 132 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHH
Confidence 36899999999999988764
No 327
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.70 E-value=1.1e-10 Score=126.77 Aligned_cols=104 Identities=28% Similarity=0.326 Sum_probs=77.7
Q ss_pred CCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCCCCCCCCCCccEEEccCCCCCccCCCcc-ccCCcCEEEc
Q 004953 226 PKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGR-LSLNITTIKL 304 (722)
Q Consensus 226 ~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~-~~~~L~~L~L 304 (722)
..|...+.++|.+. .+..++.-++.|+.|+|++|+++... .+..+++|++|||++|.+. .+|... ..-.|+.|++
T Consensus 164 n~L~~a~fsyN~L~--~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~l 239 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV--LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNL 239 (1096)
T ss_pred hhHhhhhcchhhHH--hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhhhheeeee
Confidence 36777888888886 46677888889999999999998544 7788899999999999998 676531 1135788888
Q ss_pred cCCcCcccCCccCCCCCCCCEEeCCCCcCcc
Q 004953 305 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (722)
Q Consensus 305 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 335 (722)
++|.++.. ..+.++.+|+.||+++|-|.+
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhc
Confidence 88877743 345667777777777776654
No 328
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.70 E-value=6e-08 Score=100.15 Aligned_cols=92 Identities=26% Similarity=0.287 Sum_probs=77.3
Q ss_pred HhhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCC-----
Q 004953 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG----- 693 (722)
Q Consensus 621 ~~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~----- 693 (722)
.++++|+..+.||+|+||.||+|... ++..+|+|.+..... ..++|.+|++++.++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35678888999999999999999974 578999999865432 346799999999999 7999999999997644
Q ss_pred -eEEEEecccccCcHHHHHHH
Q 004953 694 -EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 -~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++||||+++++|.+++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~ 102 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKG 102 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHH
Confidence 48999999999999887655
No 329
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.69 E-value=5e-08 Score=101.29 Aligned_cols=89 Identities=28% Similarity=0.506 Sum_probs=73.2
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCc----EEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~----~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
.+|+..+.||+|+||+||+|.+ ++|. .||||.++... ....+++.+|+.++..++|+||++++|+|.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 4577788999999999999985 3444 48999986543 3335679999999999999999999999975 45779
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
++||+++|+|.+++++
T Consensus 86 ~~~~~~~g~l~~~l~~ 101 (279)
T cd05109 86 VTQLMPYGCLLDYVRE 101 (279)
T ss_pred EEEcCCCCCHHHHHhh
Confidence 9999999999888765
No 330
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.69 E-value=5.6e-08 Score=101.80 Aligned_cols=87 Identities=23% Similarity=0.335 Sum_probs=72.3
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
++|+..+.||+|++|+||+|... +|+.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 35777889999999999999964 688999999864322 223568899999999999999999999999999999999
Q ss_pred ccccCcHHHHH
Q 004953 701 LYIYLFIFQFS 711 (722)
Q Consensus 701 y~~~G~L~~~l 711 (722)
|++ ++|.+++
T Consensus 82 ~~~-~~l~~~~ 91 (294)
T PLN00009 82 YLD-LDLKKHM 91 (294)
T ss_pred ccc-ccHHHHH
Confidence 996 4665544
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.69 E-value=3.8e-08 Score=100.92 Aligned_cols=82 Identities=20% Similarity=0.237 Sum_probs=71.0
Q ss_pred eecCCCeeEEEEEeCC-CcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||+|+||.||+++..+ |+.||+|.+..... ...+.+.+|++++.+++|+||+++++.+..++..++++||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999764 89999999865432 2345789999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 004953 708 FQFSIK 713 (722)
Q Consensus 708 ~~~l~~ 713 (722)
.+++.+
T Consensus 81 ~~~l~~ 86 (265)
T cd05579 81 ASLLEN 86 (265)
T ss_pred HHHHHH
Confidence 877655
No 332
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.68 E-value=5.6e-08 Score=106.14 Aligned_cols=82 Identities=20% Similarity=0.219 Sum_probs=69.9
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+|+..+.||+|+||.||++.. ..++.||+|+.. .+.+.+|++++++++|||||++++++...+..++|+||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 4577788999999999999985 468899999753 235789999999999999999999999999999999999
Q ss_pred ccCcHHHHHH
Q 004953 703 IYLFIFQFSI 712 (722)
Q Consensus 703 ~~G~L~~~l~ 712 (722)
. |+|.+++.
T Consensus 166 ~-~~L~~~l~ 174 (391)
T PHA03212 166 K-TDLYCYLA 174 (391)
T ss_pred C-CCHHHHHH
Confidence 6 67766653
No 333
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.68 E-value=9.5e-09 Score=79.82 Aligned_cols=57 Identities=33% Similarity=0.508 Sum_probs=24.0
Q ss_pred CCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccC
Q 004953 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (722)
Q Consensus 108 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 164 (722)
|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 444444444444333334444444444444444444333334444444444444444
No 334
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.68 E-value=8.9e-08 Score=97.67 Aligned_cols=89 Identities=24% Similarity=0.355 Sum_probs=77.0
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||++... ++..||+|++..... ...+++.+|++++.+++|+|++++.+.+...+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 566788999999999999964 588999999865432 34567899999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHH
Q 004953 703 IYLFIFQFSIKL 714 (722)
Q Consensus 703 ~~G~L~~~l~~~ 714 (722)
++++|.+++++.
T Consensus 82 ~~~~L~~~l~~~ 93 (258)
T cd08215 82 DGGDLSQKIKKQ 93 (258)
T ss_pred CCCcHHHHHHHh
Confidence 999998887653
No 335
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.68 E-value=6.1e-08 Score=101.87 Aligned_cols=88 Identities=27% Similarity=0.398 Sum_probs=71.3
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 693 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~----- 693 (722)
+.++|+..+.||+|+||.||+|... +|+.||||.++.... .....+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4467888899999999999999974 588999999864322 22346789999999999999999999997654
Q ss_pred -----eEEEEecccccCcHHHH
Q 004953 694 -----EQVLPLKLYIYLFIFQF 710 (722)
Q Consensus 694 -----~~~Lv~ey~~~G~L~~~ 710 (722)
..++|+||+++ ++.++
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~ 105 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGL 105 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHH
Confidence 78999999986 44443
No 336
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.68 E-value=7.9e-08 Score=101.96 Aligned_cols=85 Identities=24% Similarity=0.365 Sum_probs=70.9
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|+..+.||+|+||.||++.. .++..||+|++..... ...+++.+|++++++++|+|+|+++++|..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66678899999999999986 4688999999864322 2235689999999999999999999999999999999999
Q ss_pred cccCcHHHHH
Q 004953 702 YIYLFIFQFS 711 (722)
Q Consensus 702 ~~~G~L~~~l 711 (722)
++ |++.+++
T Consensus 107 ~~-g~l~~~~ 115 (317)
T cd06635 107 CL-GSASDLL 115 (317)
T ss_pred CC-CCHHHHH
Confidence 97 5665554
No 337
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.68 E-value=3.1e-08 Score=102.66 Aligned_cols=90 Identities=20% Similarity=0.212 Sum_probs=76.8
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEe
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+|...+.||+|+||.||++... +|..||+|.+... .....+.+..|++++.+++ |+||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 5667789999999999999964 6899999998642 2233457889999999998 999999999999999999999
Q ss_pred cccccCcHHHHHHHH
Q 004953 700 KLYIYLFIFQFSIKL 714 (722)
Q Consensus 700 ey~~~G~L~~~l~~~ 714 (722)
||+++|+|.+++++.
T Consensus 82 e~~~~~~L~~~l~~~ 96 (280)
T cd05581 82 EYAPNGELLQYIRKY 96 (280)
T ss_pred cCCCCCcHHHHHHHc
Confidence 999999998887653
No 338
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.67 E-value=5.9e-08 Score=102.18 Aligned_cols=89 Identities=27% Similarity=0.473 Sum_probs=71.3
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCc----EEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~----~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~L 697 (722)
++|...+.||+|+||.||+|... +|. .||+|.+..... ....+|.+|+.++++++||||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 35667789999999999999853 443 578998865432 2334789999999999999999999999754 4678
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
++||+++|+|.+++.+
T Consensus 86 v~e~~~~g~l~~~~~~ 101 (303)
T cd05110 86 VTQLMPHGCLLDYVHE 101 (303)
T ss_pred eehhcCCCCHHHHHHh
Confidence 9999999999887654
No 339
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.67 E-value=4.7e-08 Score=101.90 Aligned_cols=86 Identities=26% Similarity=0.384 Sum_probs=73.0
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+|+..+.||+|+||.||+|... ++..||||.++... ....+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 4667789999999999999875 57899999986432 22346799999999999999999999999999999999999
Q ss_pred cccCcHHHH
Q 004953 702 YIYLFIFQF 710 (722)
Q Consensus 702 ~~~G~L~~~ 710 (722)
++++.+..+
T Consensus 82 ~~~~~l~~~ 90 (288)
T cd07833 82 VERTLLELL 90 (288)
T ss_pred CCCCHHHHH
Confidence 998876544
No 340
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.66 E-value=8.1e-08 Score=99.26 Aligned_cols=87 Identities=23% Similarity=0.315 Sum_probs=69.7
Q ss_pred ccCCCeeecCCCeeEEEEEeC----CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC------
Q 004953 626 FNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~----~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~------ 693 (722)
|...+.||+|+||.||+|... .+..||||.+.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 345678999999999999863 36789999986542 233467999999999999999999999986532
Q ss_pred eEEEEecccccCcHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~ 712 (722)
..++++||+++|+|.+++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~ 99 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLL 99 (273)
T ss_pred ceEEEEecCCCCcHHHHHH
Confidence 3478999999999977653
No 341
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.66 E-value=7.3e-08 Score=104.16 Aligned_cols=83 Identities=23% Similarity=0.291 Sum_probs=68.3
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC------
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~------ 693 (722)
.++|...+.||+|+||.||++.. ..|..||||++... .....+.+.+|+.++.+++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 46788889999999999999985 45889999998643 2233456889999999999999999999986543
Q ss_pred eEEEEecccccC
Q 004953 694 EQVLPLKLYIYL 705 (722)
Q Consensus 694 ~~~Lv~ey~~~G 705 (722)
..++||||++++
T Consensus 100 ~~~lv~e~~~~~ 111 (359)
T cd07876 100 DVYLVMELMDAN 111 (359)
T ss_pred eeEEEEeCCCcC
Confidence 479999999865
No 342
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.66 E-value=8.4e-08 Score=102.29 Aligned_cols=83 Identities=18% Similarity=0.177 Sum_probs=70.4
Q ss_pred eeecC--CCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 631 QIGQG--GYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 631 ~iG~G--~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
.||+| +||+||++.. ..|+.||||.+.... ....+.+.+|+.++..++|||||++++++..++..++|+||+++|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999985 468999999986432 222356889999999999999999999999999999999999999
Q ss_pred cHHHHHHH
Q 004953 706 FIFQFSIK 713 (722)
Q Consensus 706 ~L~~~l~~ 713 (722)
++.+++++
T Consensus 85 ~l~~~l~~ 92 (328)
T cd08226 85 SANSLLKT 92 (328)
T ss_pred CHHHHHHh
Confidence 99888765
No 343
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.66 E-value=2.5e-08 Score=117.26 Aligned_cols=199 Identities=24% Similarity=0.303 Sum_probs=119.8
Q ss_pred ceeEEEcCCCCCccccCccccCCCCCCEEECCCCC--CccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK--ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
.++...+.++.+.. ++... ..++|++|-+..|. +....+..|..++.|++|||++|.--+.+|+.++.|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~~-~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEH-IAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhh-ccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 45666666665542 22222 23467888787775 4433334467788888888888776667888888888888888
Q ss_pred cccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCCccceeecccCCCC--CCCCccCCCCCCCcEEECcCCCC
Q 004953 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT--GYLPPELSELPKLLILQLDNNNF 238 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~l~~N~l 238 (722)
+++..+. .+|..+.++..|.+|++..+.-...+|.....+++|++|.+..-... ...-..+..+.+|+.+.......
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 8888877 67888888888888888877765555666666888888877665422 22223344445555554433221
Q ss_pred CCCCcchhccCCCCCc----EEEccCCCCccCCCCCCCCCCccEEEccCCCCC
Q 004953 239 EGTTIPASYSNMSKLL----KLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (722)
Q Consensus 239 ~~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (722)
.+-..+..+..|. .+.+..+........+..+.+|+.|.+.++.+.
T Consensus 681 ---~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 681 ---LLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred ---HhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCc
Confidence 0111222222222 233333333334445666777777777777665
No 344
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.66 E-value=1.7e-08 Score=78.45 Aligned_cols=57 Identities=33% Similarity=0.576 Sum_probs=22.4
Q ss_pred CCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCc
Q 004953 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (722)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (722)
|++|++++|+++...++.|.++++|++|++++|.++...+..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 344444444444333333334444444444444443333333333333333333333
No 345
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.65 E-value=1e-07 Score=100.89 Aligned_cols=85 Identities=29% Similarity=0.366 Sum_probs=69.6
Q ss_pred ccCCCeeecCCCeeEEEEEeC---CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVL 697 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~---~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~L 697 (722)
|+..+.||+|+||.||+|... .+..||+|.+.... ....+.+.+|+.++.+++||||+++++++... +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 556678999999999999964 47899999987532 22235688999999999999999999999987 78999
Q ss_pred EecccccCcHHHHH
Q 004953 698 PLKLYIYLFIFQFS 711 (722)
Q Consensus 698 v~ey~~~G~L~~~l 711 (722)
||||+++ ++.+++
T Consensus 82 v~e~~~~-~l~~~~ 94 (316)
T cd07842 82 LFDYAEH-DLWQII 94 (316)
T ss_pred EEeCCCc-CHHHHH
Confidence 9999985 454443
No 346
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.65 E-value=6.7e-08 Score=101.83 Aligned_cols=80 Identities=24% Similarity=0.355 Sum_probs=68.1
Q ss_pred CCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccC
Q 004953 629 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
++++|+|.||+||-|.. +.|+.||||.+.... .+++.+..+|+.||.+++||.||.|-.-|.+.+..+.|||-+.+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 57899999999999986 469999999996542 24456799999999999999999999999999999999999854
Q ss_pred cHHH
Q 004953 706 FIFQ 709 (722)
Q Consensus 706 ~L~~ 709 (722)
|+.+
T Consensus 648 DMLE 651 (888)
T KOG4236|consen 648 DMLE 651 (888)
T ss_pred hHHH
Confidence 4433
No 347
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.64 E-value=1.4e-07 Score=94.13 Aligned_cols=89 Identities=29% Similarity=0.466 Sum_probs=77.5
Q ss_pred ccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|...+.||+|++|.||++...+ +..+|+|........ ..+.+.+|++.+.+++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 3456789999999999999865 889999999765444 55689999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHH
Q 004953 704 YLFIFQFSIKL 714 (722)
Q Consensus 704 ~G~L~~~l~~~ 714 (722)
+++|.+++.+.
T Consensus 81 ~~~L~~~~~~~ 91 (225)
T smart00221 81 GGDLFDYLRKK 91 (225)
T ss_pred CCCHHHHHHhc
Confidence 99998887653
No 348
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.64 E-value=8.4e-08 Score=99.75 Aligned_cols=87 Identities=26% Similarity=0.399 Sum_probs=72.5
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|++|+||+|.. .+|..||||++.... ....+.|.+|++++++++|+|++++++++..++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 34567899999999999986 468999999986432 222356889999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
+ ++|.+++.+
T Consensus 81 ~-~~l~~~~~~ 90 (283)
T cd07835 81 D-LDLKKYMDS 90 (283)
T ss_pred C-cCHHHHHhh
Confidence 5 688777644
No 349
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.64 E-value=6.6e-08 Score=98.74 Aligned_cols=88 Identities=23% Similarity=0.345 Sum_probs=75.5
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||++.. .++..+|+|.+.... .....++.+|++++++++|+||+++.+++...+..++|+||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 56678899999999999975 468899999986432 233457889999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
++++|.+++.+
T Consensus 82 ~~~~L~~~~~~ 92 (256)
T cd08530 82 PFGDLSKAISK 92 (256)
T ss_pred CCCCHHHHHHH
Confidence 99999888765
No 350
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.63 E-value=1.4e-08 Score=97.72 Aligned_cols=93 Identities=24% Similarity=0.245 Sum_probs=81.5
Q ss_pred cCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQVL 697 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~~L 697 (722)
++|...+.+|+|+|..||.++ +.++..+|+|++.....++.+..++|++.-++++||||+++++++..+. +.||
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 456777899999999999998 6789999999998776677788999999999999999999999986533 5899
Q ss_pred EecccccCcHHHHHHHHHh
Q 004953 698 PLKLYIYLFIFQFSIKLIF 716 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~~~~ 716 (722)
+++|...|+|+|+++++.+
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~ 119 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKI 119 (302)
T ss_pred EeehhccccHHHHHHHHhh
Confidence 9999999999999887653
No 351
>PRK10345 hypothetical protein; Provisional
Probab=98.63 E-value=1.4e-07 Score=92.84 Aligned_cols=86 Identities=15% Similarity=0.242 Sum_probs=67.3
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-----CCCcccceEEEEEeCC---eEE-
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLVGYCDEEG---EQV- 696 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-----~H~Niv~l~g~~~~~~---~~~- 696 (722)
.+....||+|+||.||. .-.++.. +||++........+++.+|++++.++ .||||++++|++.++. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 45568999999999996 3234444 79988655444567899999999999 6799999999998863 434
Q ss_pred EEecc--cccCcHHHHHHH
Q 004953 697 LPLKL--YIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey--~~~G~L~~~l~~ 713 (722)
+|+|| ++.|+|.+++.+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~ 100 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQ 100 (210)
T ss_pred EEecCCCCcchhHHHHHHc
Confidence 78999 668999998864
No 352
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.62 E-value=1.3e-07 Score=96.63 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=72.5
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~~~~Lv~ey 701 (722)
|+..+.||+|++|.||++... +++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. ++..++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 566789999999999999854 57899999986432 2334568999999999999999999998764 4467899999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+++|+|.+++++
T Consensus 82 ~~~~~l~~~l~~ 93 (257)
T cd08223 82 CEGGDLYHKLKE 93 (257)
T ss_pred cCCCcHHHHHHH
Confidence 999999888754
No 353
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.62 E-value=1.7e-07 Score=97.96 Aligned_cols=88 Identities=27% Similarity=0.385 Sum_probs=66.7
Q ss_pred CccCCCeeecCCCeeEEEEEe-C-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhc---CCCcccceEEEEEe-----C
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-P-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----E 692 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l---~H~Niv~l~g~~~~-----~ 692 (722)
+|...+.||+|+||.||+|.. . +|..||||+++.... .....+.+|+.++.++ +|||||+++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 466778999999999999985 3 467899999864322 2234567788777765 69999999999863 3
Q ss_pred CeEEEEecccccCcHHHHHHH
Q 004953 693 GEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
...++|+||++ |+|.+++.+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~ 101 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDK 101 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHh
Confidence 46899999997 577666543
No 354
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.62 E-value=1.1e-07 Score=99.64 Aligned_cols=89 Identities=20% Similarity=0.276 Sum_probs=72.6
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh--cHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~--~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~Lv 698 (722)
++|+..+.||+|+||.||+|..+ +++.||+|.++..... ....+.+|+.++.+++||||+++.+++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35677789999999999999975 5889999998644322 223578899999999999999999999877 889999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||++ ++|.+++.+
T Consensus 85 ~e~~~-~~L~~~~~~ 98 (293)
T cd07843 85 MEYVE-HDLKSLMET 98 (293)
T ss_pred ehhcC-cCHHHHHHh
Confidence 99998 477665543
No 355
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.62 E-value=4.9e-08 Score=103.68 Aligned_cols=92 Identities=20% Similarity=0.303 Sum_probs=75.5
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe-EEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-QVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~-~~Lv~ 699 (722)
++|...+++|+|+||.++.... .++..+++|.+.-... ..++...+|+.++++++|||||...+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 3566678999999999987664 3577899999865432 233467899999999999999999999998887 99999
Q ss_pred cccccCcHHHHHHHHH
Q 004953 700 KLYIYLFIFQFSIKLI 715 (722)
Q Consensus 700 ey~~~G~L~~~l~~~~ 715 (722)
+|++||++.+.+.+..
T Consensus 84 ~Y~eGg~l~~~i~~~k 99 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK 99 (426)
T ss_pred eecCCCCHHHHHHHHh
Confidence 9999999988776654
No 356
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.62 E-value=1.1e-07 Score=98.83 Aligned_cols=86 Identities=26% Similarity=0.358 Sum_probs=71.2
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEEEec
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVLPLK 700 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~Lv~e 700 (722)
|+..+.||+|+||.||+|... +|..+|||++.... ....+.+.+|++++.+++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 344578999999999999975 48899999997543 22345789999999999999999999999987 89999999
Q ss_pred ccccCcHHHHHH
Q 004953 701 LYIYLFIFQFSI 712 (722)
Q Consensus 701 y~~~G~L~~~l~ 712 (722)
|+++ +|.+++.
T Consensus 81 ~~~~-~l~~~~~ 91 (287)
T cd07840 81 YMDH-DLTGLLD 91 (287)
T ss_pred cccc-cHHHHHh
Confidence 9984 7766543
No 357
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.61 E-value=8.5e-08 Score=102.23 Aligned_cols=94 Identities=20% Similarity=0.213 Sum_probs=75.2
Q ss_pred HHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEe-CC
Q 004953 618 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 693 (722)
Q Consensus 618 ~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~ 693 (722)
++...+++|+..+.||+|+||.||++.. .+|..||||++.... ....+.+.+|++++.+++|||||++.+++.. .+
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 3445677898899999999999999985 478999999875422 2234568899999999999999999999876 55
Q ss_pred eEEEEecccccCcHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~ 712 (722)
..++++||+. ++|.+++.
T Consensus 84 ~~~lv~e~~~-~~L~~~~~ 101 (328)
T cd07856 84 DIYFVTELLG-TDLHRLLT 101 (328)
T ss_pred cEEEEeehhc-cCHHHHHh
Confidence 7899999984 57765543
No 358
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.61 E-value=1.1e-07 Score=101.54 Aligned_cols=84 Identities=23% Similarity=0.344 Sum_probs=69.2
Q ss_pred CCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhc--------------HHHHHHHHHHHHhcCCCcccceEEEEEeCC
Q 004953 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~ 693 (722)
.+.||+|+||+||+|... +++.||||.++...... ...+.+|++++.+++|+||+++++++..++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 467999999999999854 68999999885432111 125789999999999999999999999999
Q ss_pred eEEEEecccccCcHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++||||++ |+|.+++.+
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~ 112 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDR 112 (335)
T ss_pred cEEEEEeccc-cCHHHHHHh
Confidence 9999999997 688776643
No 359
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.61 E-value=1.3e-07 Score=99.06 Aligned_cols=88 Identities=26% Similarity=0.290 Sum_probs=71.5
Q ss_pred CccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCe-----E
Q 004953 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE-----Q 695 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~-----~ 695 (722)
+|+..+.||+|+||.||+|... +|+.||||..+.... .....+.+|+.++.+++ |+||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 5777889999999999999964 688999998764322 22357889999999995 6999999999987665 8
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
++||||+++ +|.+++.+
T Consensus 82 ~lv~e~~~~-~l~~~~~~ 98 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDS 98 (295)
T ss_pred EEEeeccCc-CHHHHHHH
Confidence 999999995 78777654
No 360
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.60 E-value=1.3e-07 Score=104.99 Aligned_cols=84 Identities=21% Similarity=0.232 Sum_probs=71.1
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
..+|...+.||+|+||.||++..+ .++.||||... ...+.+|++++++++|+|||++++++..++..++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 346778889999999999999975 47889999642 23467899999999999999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+. |+|.+++.+
T Consensus 242 ~~-~~L~~~l~~ 252 (461)
T PHA03211 242 YR-SDLYTYLGA 252 (461)
T ss_pred cC-CCHHHHHHh
Confidence 95 788777643
No 361
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.60 E-value=1.2e-07 Score=101.07 Aligned_cols=82 Identities=20% Similarity=0.186 Sum_probs=65.8
Q ss_pred eecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhc---CCCcccceEEEEEeCCeEEEEeccccc
Q 004953 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l---~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
||+|+||+||+|... +|..||||++..... .....+..|..++.+. +||||+++.+++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999864 589999999853211 1223466677777766 799999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 81 g~L~~~l~~ 89 (330)
T cd05586 81 GELFWHLQK 89 (330)
T ss_pred ChHHHHHHh
Confidence 999776543
No 362
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.58 E-value=1.1e-07 Score=99.10 Aligned_cols=88 Identities=23% Similarity=0.227 Sum_probs=72.6
Q ss_pred ccCCCeeecCCCeeEEEEEe----CCCcEEEEEEccCCCh----hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQV 696 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l----~~g~~vAVK~l~~~~~----~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~ 696 (722)
|+..+.||+|+||.||++.. .++..||||.++.... ...+.+.+|+.++.++ +|+||+++.+++..++..+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 55567899999999999874 3578899999864321 2235688999999999 6999999999998889999
Q ss_pred EEecccccCcHHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~~ 713 (722)
+||||+++|+|.+++.+
T Consensus 82 lv~e~~~~~~L~~~~~~ 98 (288)
T cd05583 82 LILDYVNGGELFTHLYQ 98 (288)
T ss_pred EEEecCCCCcHHHHHhh
Confidence 99999999999887653
No 363
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.58 E-value=1.6e-07 Score=101.37 Aligned_cols=87 Identities=20% Similarity=0.250 Sum_probs=69.5
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC------
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 692 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~------ 692 (722)
..++|...+.||+|+||.||++.. ..+..||||++.... ....+.+.+|+.++..++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 346788889999999999999985 358899999986532 22345688999999999999999999998653
Q ss_pred CeEEEEecccccCcHHH
Q 004953 693 GEQVLPLKLYIYLFIFQ 709 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~ 709 (722)
...++||||++++ +.+
T Consensus 95 ~~~~lv~e~~~~~-l~~ 110 (355)
T cd07874 95 QDVYLVMELMDAN-LCQ 110 (355)
T ss_pred ceeEEEhhhhccc-HHH
Confidence 3479999999864 443
No 364
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=8.4e-08 Score=104.87 Aligned_cols=85 Identities=18% Similarity=0.256 Sum_probs=72.7
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~L 697 (722)
.++|....++|+|+||+|+.++++ +++.+|||+++... ..+.+....|.+|+.-. +||-+++|++++.+.+..+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 356888899999999999999975 57899999997653 23345678888888776 69999999999999999999
Q ss_pred EecccccCcH
Q 004953 698 PLKLYIYLFI 707 (722)
Q Consensus 698 v~ey~~~G~L 707 (722)
||||+.|||+
T Consensus 447 vmey~~Ggdm 456 (694)
T KOG0694|consen 447 VMEYVAGGDL 456 (694)
T ss_pred EEEecCCCcE
Confidence 9999999997
No 365
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.58 E-value=3e-07 Score=97.35 Aligned_cols=86 Identities=24% Similarity=0.349 Sum_probs=70.1
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|...+.||+|+||+||+|.. .+|..||+|.+..... ...+.+.+|++++.+++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 44456799999999999986 4588999999864322 2234688999999999999999999999999999999999
Q ss_pred cccCcHHHHHH
Q 004953 702 YIYLFIFQFSI 712 (722)
Q Consensus 702 ~~~G~L~~~l~ 712 (722)
+. |++.+++.
T Consensus 103 ~~-~~l~~~l~ 112 (313)
T cd06633 103 CL-GSASDLLE 112 (313)
T ss_pred CC-CCHHHHHH
Confidence 96 56665543
No 366
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.57 E-value=1.9e-07 Score=101.10 Aligned_cols=86 Identities=17% Similarity=0.233 Sum_probs=69.1
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeC------C
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~------~ 693 (722)
.++|...+.||+|+||.||++.. ..++.||||++.... ....+.+.+|+.++..++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 46788889999999999999985 458899999986432 23345688999999999999999999988643 3
Q ss_pred eEEEEecccccCcHHH
Q 004953 694 EQVLPLKLYIYLFIFQ 709 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~ 709 (722)
..++||||+++ +|.+
T Consensus 103 ~~~lv~e~~~~-~l~~ 117 (364)
T cd07875 103 DVYIVMELMDA-NLCQ 117 (364)
T ss_pred eEEEEEeCCCC-CHHH
Confidence 57999999986 4444
No 367
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.57 E-value=8.4e-08 Score=99.81 Aligned_cols=86 Identities=24% Similarity=0.330 Sum_probs=71.3
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||+|... +|..||+|+++.... .....+.+|++++.+++|+||+++++++.+.+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 556678999999999999964 688999999864322 22346888999999999999999999999999999999999
Q ss_pred ccCcHHHHHH
Q 004953 703 IYLFIFQFSI 712 (722)
Q Consensus 703 ~~G~L~~~l~ 712 (722)
+ |+|.+++.
T Consensus 82 ~-~~l~~~~~ 90 (284)
T cd07839 82 D-QDLKKYFD 90 (284)
T ss_pred C-CCHHHHHH
Confidence 7 57766654
No 368
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=5.9e-08 Score=105.34 Aligned_cols=82 Identities=23% Similarity=0.283 Sum_probs=70.7
Q ss_pred eeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHHH
Q 004953 631 QIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIFQ 709 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~~ 709 (722)
++|+|.||+||-|.- .+...+|||-+.........-...|+..-++++|+|||+.+|.|.+.+..-+.||-+|||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 799999999999984 4456789999976554444567889999999999999999999999999999999999999966
Q ss_pred HHH
Q 004953 710 FSI 712 (722)
Q Consensus 710 ~l~ 712 (722)
.+|
T Consensus 662 LLr 664 (1226)
T KOG4279|consen 662 LLR 664 (1226)
T ss_pred HHH
Confidence 554
No 369
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.56 E-value=2.3e-07 Score=96.31 Aligned_cols=86 Identities=24% Similarity=0.324 Sum_probs=68.5
Q ss_pred cCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcC-CCcccceEEEEEeC--CeEEEEecc
Q 004953 627 NSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQVLPLKL 701 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~--~~~~Lv~ey 701 (722)
+..+.||+|+||.||+|.. .++..||+|+++.... .......+|+.++.++. |+|++++++++.+. +..++|+||
T Consensus 2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 3457899999999999985 4688999999865322 22234568999999995 99999999999987 889999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
++ |++.+++++
T Consensus 82 ~~-~~l~~~l~~ 92 (282)
T cd07831 82 MD-MNLYELIKG 92 (282)
T ss_pred CC-ccHHHHHHh
Confidence 97 577666543
No 370
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.55 E-value=2.7e-07 Score=97.72 Aligned_cols=80 Identities=24% Similarity=0.296 Sum_probs=64.1
Q ss_pred CCeeecCCCeeEEEEEeC---CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEEEEecccc
Q 004953 629 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQVLPLKLYI 703 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~~Lv~ey~~ 703 (722)
.+.||+|+||+||+|... ++..||+|.++... ....+.+|++++.+++|||||++++++.. +...++|+||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 46789999986432 23467899999999999999999998864 456889999986
Q ss_pred cCcHHHHH
Q 004953 704 YLFIFQFS 711 (722)
Q Consensus 704 ~G~L~~~l 711 (722)
+ +|++++
T Consensus 84 ~-~l~~~~ 90 (317)
T cd07868 84 H-DLWHII 90 (317)
T ss_pred C-CHHHHH
Confidence 4 565554
No 371
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.55 E-value=1.1e-07 Score=98.69 Aligned_cols=87 Identities=25% Similarity=0.361 Sum_probs=71.8
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|+..+.||+|+||.||+|... +++.||||++..... .+.....+|+..+.+++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 345678999999999999975 478899999865322 22334567999999999 999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 81 -~~~l~~~~~~ 90 (283)
T cd07830 81 -EGNLYQLMKD 90 (283)
T ss_pred -CCCHHHHHHh
Confidence 8899877654
No 372
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.55 E-value=2.4e-07 Score=97.85 Aligned_cols=85 Identities=25% Similarity=0.374 Sum_probs=70.2
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC---ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|+..+.||+|+||.||+|... ++..||+|.+... .....+++.+|++++++++|+|++++.+++...+..++|+||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 555678999999999999964 5788999988542 222335688999999999999999999999999999999999
Q ss_pred cccCcHHHHH
Q 004953 702 YIYLFIFQFS 711 (722)
Q Consensus 702 ~~~G~L~~~l 711 (722)
+. |++.+++
T Consensus 97 ~~-~~l~~~~ 105 (308)
T cd06634 97 CL-GSASDLL 105 (308)
T ss_pred cC-CCHHHHH
Confidence 97 6776654
No 373
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.55 E-value=2.5e-07 Score=97.66 Aligned_cols=90 Identities=24% Similarity=0.324 Sum_probs=71.3
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh--cHHHHHHHHHHHHhcCCCcccceEEEEEeC--CeEEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQVL 697 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~--~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~--~~~~L 697 (722)
.++|+..+.||+|+||.||+|... +|..||+|.++..... ....+.+|++++.+++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 356888899999999999999964 5899999998643221 123567899999999999999999998754 56899
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
||||+++ +|.+++.+
T Consensus 86 v~e~~~~-~l~~~l~~ 100 (309)
T cd07845 86 VMEYCEQ-DLASLLDN 100 (309)
T ss_pred EEecCCC-CHHHHHHh
Confidence 9999974 66555443
No 374
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.54 E-value=1.1e-07 Score=97.41 Aligned_cols=88 Identities=17% Similarity=0.086 Sum_probs=69.8
Q ss_pred ccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCC-----ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
|...+.||+|+||.||++.... +..+++|.++.. ......++..|+.++.+++||||+++++++.+.+..++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 5566889999999999998643 445566655431 1223345778999999999999999999999888999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||+++++|.+++++
T Consensus 82 e~~~~~~l~~~~~~ 95 (260)
T cd08222 82 EYCEGRDLDCKLEE 95 (260)
T ss_pred EeCCCCCHHHHHHH
Confidence 99999999877654
No 375
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.54 E-value=1.6e-07 Score=95.52 Aligned_cols=82 Identities=27% Similarity=0.282 Sum_probs=70.9
Q ss_pred eecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
||+|+||.||++... +++.+|+|.+..... .....+..|++++.+++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999975 488999999865432 2345789999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 004953 708 FQFSIK 713 (722)
Q Consensus 708 ~~~l~~ 713 (722)
.+++.+
T Consensus 81 ~~~l~~ 86 (250)
T cd05123 81 FSHLSK 86 (250)
T ss_pred HHHHHh
Confidence 888755
No 376
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.54 E-value=3e-07 Score=97.35 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=64.3
Q ss_pred CCeeecCCCeeEEEEEeC---CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEe--CCeEEEEecccc
Q 004953 629 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQVLPLKLYI 703 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~--~~~~~Lv~ey~~ 703 (722)
...||+|+||+||+|... ++..||+|.+.... ....+.+|++++.+++|||||++++++.. +...++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 367999999999999864 35789999986532 23468899999999999999999999864 457899999987
Q ss_pred cCcHHHHH
Q 004953 704 YLFIFQFS 711 (722)
Q Consensus 704 ~G~L~~~l 711 (722)
+ +|++++
T Consensus 84 ~-~l~~~~ 90 (317)
T cd07867 84 H-DLWHII 90 (317)
T ss_pred C-cHHHHH
Confidence 5 555554
No 377
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.54 E-value=1.7e-07 Score=100.58 Aligned_cols=89 Identities=20% Similarity=0.269 Sum_probs=70.4
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeC------
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 692 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~------ 692 (722)
..++|...+.||+|+||+||+|.. .++..||||++..... ...+.+.+|++++.+++|+|||++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 346788889999999999999985 4688999999865322 2335688999999999999999999987543
Q ss_pred CeEEEEecccccCcHHHHH
Q 004953 693 GEQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 693 ~~~~Lv~ey~~~G~L~~~l 711 (722)
...++++||+ +++|.+++
T Consensus 93 ~~~~~~~~~~-~~~l~~~~ 110 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIV 110 (343)
T ss_pred CcEEEEeecC-CCCHHHHH
Confidence 3568999988 67776554
No 378
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.53 E-value=2e-07 Score=99.78 Aligned_cols=89 Identities=25% Similarity=0.377 Sum_probs=71.2
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCC--ChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeC--CeEE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE--GEQV 696 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~--~~~~ 696 (722)
.++|+..+.||+|+||.||+|... +|..||||++... .......+.+|+.++.++ +|+||++++|+|... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 345777789999999999999864 5889999988532 222335678899999999 999999999998754 3689
Q ss_pred EEecccccCcHHHHHH
Q 004953 697 LPLKLYIYLFIFQFSI 712 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l~ 712 (722)
+|+||++ ++|.++++
T Consensus 86 lv~e~~~-~~L~~~~~ 100 (337)
T cd07852 86 LVFEYME-TDLHAVIR 100 (337)
T ss_pred EEecccc-cCHHHHHh
Confidence 9999997 58877654
No 379
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.53 E-value=2.9e-07 Score=98.87 Aligned_cols=96 Identities=19% Similarity=0.272 Sum_probs=75.7
Q ss_pred cHHHHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 004953 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (722)
Q Consensus 615 ~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~ 691 (722)
..+++...+++|...+.||+|+||.||+|.. .+|..||||++.... ....+.+.+|++++.+++|+||+++.+++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 4456667788999999999999999999985 568899999986432 2224568899999999999999999998864
Q ss_pred C------CeEEEEecccccCcHHHHH
Q 004953 692 E------GEQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 692 ~------~~~~Lv~ey~~~G~L~~~l 711 (722)
. ...++++||+ +++|.+++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~ 112 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIV 112 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHH
Confidence 3 3467788876 67776543
No 380
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.53 E-value=1.8e-07 Score=100.95 Aligned_cols=83 Identities=18% Similarity=0.294 Sum_probs=69.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.+|...+.||+|+||.||+|... .+..||+|..... ....|+.++.+++|+|||++++++...+..++|+||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 46788889999999999999974 4678999975432 2356999999999999999999999999999999999
Q ss_pred ccCcHHHHHHH
Q 004953 703 IYLFIFQFSIK 713 (722)
Q Consensus 703 ~~G~L~~~l~~ 713 (722)
. |+|.+++.+
T Consensus 140 ~-~~l~~~l~~ 149 (357)
T PHA03209 140 S-SDLYTYLTK 149 (357)
T ss_pred C-CcHHHHHHh
Confidence 5 678776643
No 381
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.52 E-value=2.8e-07 Score=98.87 Aligned_cols=89 Identities=19% Similarity=0.292 Sum_probs=71.1
Q ss_pred hhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 693 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~----- 693 (722)
..++|+..+.||+|+||.||++.. .+|..||||++.... ....+.+.+|++++.+++|+||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 456788889999999999999985 468999999985432 222346889999999999999999999987643
Q ss_pred -eEEEEecccccCcHHHHH
Q 004953 694 -EQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 694 -~~~Lv~ey~~~G~L~~~l 711 (722)
..++||||+ +++|.+++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~ 110 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLM 110 (343)
T ss_pred ceEEEEEecC-CCCHHHHH
Confidence 458999999 66776553
No 382
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.52 E-value=4e-07 Score=94.65 Aligned_cols=83 Identities=24% Similarity=0.226 Sum_probs=63.8
Q ss_pred eeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHH---HhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 631 QIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l---~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
.||+|+||.||++.. .+++.+|||.+..... .....+.+|..++ ...+|+||+++.+++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999986 4588999998864321 1122344554433 33479999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 81 ~~~L~~~i~~ 90 (279)
T cd05633 81 GGDLHYHLSQ 90 (279)
T ss_pred CCCHHHHHHh
Confidence 9999877643
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.52 E-value=2.4e-07 Score=103.75 Aligned_cols=98 Identities=23% Similarity=0.336 Sum_probs=79.1
Q ss_pred cHHHHHHhhcCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEe-
Q 004953 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 691 (722)
Q Consensus 615 ~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~- 691 (722)
.++.+...++-|...++||.|.+|.||+++ .++|+.+|||.+.... ..+++...|.++++.. +|||++.++|++..
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 344555566778888999999999999998 5678999999987643 3345778888898877 89999999999974
Q ss_pred ----CCeEEEEecccccCcHHHHHHH
Q 004953 692 ----EGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 692 ----~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
+++.|||||||.+|+.-|..+.
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn 114 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKN 114 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhh
Confidence 5789999999999998665443
No 384
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.51 E-value=2.9e-07 Score=98.73 Aligned_cols=85 Identities=22% Similarity=0.314 Sum_probs=68.1
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC------e
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------E 694 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~------~ 694 (722)
.+|...+.||+|+||.||+|.. .+|..||||++.... ......+.+|++++.+++|+||+++++++.... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 5788889999999999999985 468999999986432 122346889999999999999999999987542 4
Q ss_pred EEEEecccccCcHHH
Q 004953 695 QVLPLKLYIYLFIFQ 709 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~ 709 (722)
.++|+||+.. ++.+
T Consensus 95 ~~lv~e~~~~-~l~~ 108 (342)
T cd07879 95 FYLVMPYMQT-DLQK 108 (342)
T ss_pred EEEEeccccc-CHHH
Confidence 6899999964 5544
No 385
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.51 E-value=3.4e-07 Score=96.48 Aligned_cols=88 Identities=24% Similarity=0.348 Sum_probs=69.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe------
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE------ 694 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~------ 694 (722)
++|+..+.||+|+||.||+|... ++..||||++..... .....+.+|++++++++||||++++++|...+.
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 45777889999999999999864 588999998854322 223456789999999999999999999976543
Q ss_pred --EEEEecccccCcHHHHHH
Q 004953 695 --QVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 695 --~~Lv~ey~~~G~L~~~l~ 712 (722)
.++||||+++ +|.+++.
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~ 110 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLS 110 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHH
Confidence 4999999974 6655543
No 386
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.51 E-value=4.1e-07 Score=93.26 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=66.3
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHHHH-HhcCCCcccceEEEEEeCCeEEEEeccccc
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFL-SRLHHRNLVSLVGYCDEEGEQVLPLKLYIY 704 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~~l-~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~ 704 (722)
+.||+|+||.||+|.. .+|+.||||.++.... .....+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999986 4588999999864322 1223455665554 455999999999999999999999999999
Q ss_pred CcHHHHHHH
Q 004953 705 LFIFQFSIK 713 (722)
Q Consensus 705 G~L~~~l~~ 713 (722)
|+|.+++.+
T Consensus 82 ~~L~~~l~~ 90 (260)
T cd05611 82 GDCASLIKT 90 (260)
T ss_pred CCHHHHHHH
Confidence 999887654
No 387
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.50 E-value=4.2e-08 Score=97.24 Aligned_cols=81 Identities=26% Similarity=0.317 Sum_probs=65.6
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-----CcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEe-CCeE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQ 695 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-----g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~~~ 695 (722)
..|+....||+|.||.||+++-.+ ...+|+|+++.... +-....++|+..++.++|||||.|+-.+.+ +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 346777889999999999997432 23689999975422 112467899999999999999999999887 8889
Q ss_pred EEEeccccc
Q 004953 696 VLPLKLYIY 704 (722)
Q Consensus 696 ~Lv~ey~~~ 704 (722)
++++||.++
T Consensus 104 ~l~fdYAEh 112 (438)
T KOG0666|consen 104 WLLFDYAEH 112 (438)
T ss_pred EEEehhhhh
Confidence 999999986
No 388
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.49 E-value=2.6e-07 Score=99.18 Aligned_cols=88 Identities=20% Similarity=0.215 Sum_probs=72.2
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC----------
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE---------- 692 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~---------- 692 (722)
.+|...+.||+|+||.||+|.. .+|..||+|++........+.+.+|++++.+++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 4677788999999999999986 45889999998765555556789999999999999999999776543
Q ss_pred ----CeEEEEecccccCcHHHHHH
Q 004953 693 ----GEQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 693 ----~~~~Lv~ey~~~G~L~~~l~ 712 (722)
...++|+||++ ++|.+++.
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~ 107 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE 107 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH
Confidence 35789999998 57766553
No 389
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.48 E-value=2.2e-07 Score=96.40 Aligned_cols=86 Identities=27% Similarity=0.366 Sum_probs=72.7
Q ss_pred cCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|++++.+++|+|++++++++...+..++|+||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 44578999999999999975 48999999987543 2223568899999999999999999999999999999999998
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
++|.+++.+
T Consensus 82 -~~l~~~i~~ 90 (282)
T cd07829 82 -MDLKKYLDK 90 (282)
T ss_pred -cCHHHHHHh
Confidence 588887755
No 390
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.47 E-value=4.9e-07 Score=94.26 Aligned_cols=87 Identities=29% Similarity=0.432 Sum_probs=65.9
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh--cHHHHHHHHHHHHhc---CCCcccceEEEEEe-----CCe
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----EGE 694 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~--~~~~f~~E~~~l~~l---~H~Niv~l~g~~~~-----~~~ 694 (722)
|...+.||+|+||+||+|... +|+.||+|.++..... ....+.+|++++.++ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 556788999999999999864 5889999998643221 223566777777665 79999999999864 245
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.++||||+++ +|.+++.+
T Consensus 82 ~~lv~e~~~~-~l~~~~~~ 99 (288)
T cd07863 82 VTLVFEHVDQ-DLRTYLDK 99 (288)
T ss_pred EEEEEccccc-CHHHHHHh
Confidence 7999999984 77766543
No 391
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.47 E-value=3.2e-07 Score=97.04 Aligned_cols=82 Identities=21% Similarity=0.066 Sum_probs=67.0
Q ss_pred eeecCCCeeEEEEEeCCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHH
Q 004953 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
.+|.|+++.||++.. +++.||||+++.. .....+.+.+|++++++++|+||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 345556666666655 6899999998653 2334467999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 004953 709 QFSIK 713 (722)
Q Consensus 709 ~~l~~ 713 (722)
+++.+
T Consensus 88 ~~l~~ 92 (314)
T cd08216 88 DLLKT 92 (314)
T ss_pred HHHHH
Confidence 87764
No 392
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.47 E-value=2.6e-07 Score=98.89 Aligned_cols=88 Identities=22% Similarity=0.309 Sum_probs=70.6
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC-----CeE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~-----~~~ 695 (722)
.+|...+.||+|+||+||++.. .++..||||.++.. .......+.+|+.++.+++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 4577788999999999999985 46899999998643 222345678899999999999999999988654 357
Q ss_pred EEEecccccCcHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~ 712 (722)
++||||+. ++|.+++.
T Consensus 85 ~lv~e~~~-~~L~~~~~ 100 (337)
T cd07858 85 YIVYELMD-TDLHQIIR 100 (337)
T ss_pred EEEEeCCC-CCHHHHHh
Confidence 99999996 67766653
No 393
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.46 E-value=4.6e-07 Score=94.50 Aligned_cols=79 Identities=27% Similarity=0.427 Sum_probs=66.1
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEeccc
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
|...+.||+|+||.||++.. .+|+.||+|.+.... ......+.+|+.++.++. |+|||+++|++..++..++++||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 44457899999999999986 458999999986432 234457999999999996 999999999999999999999998
Q ss_pred cc
Q 004953 703 IY 704 (722)
Q Consensus 703 ~~ 704 (722)
+.
T Consensus 86 ~~ 87 (288)
T cd06616 86 DI 87 (288)
T ss_pred cC
Confidence 74
No 394
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.46 E-value=4.8e-07 Score=99.03 Aligned_cols=82 Identities=21% Similarity=0.301 Sum_probs=68.6
Q ss_pred cCccCCCeeecCCCeeEEEEEeC---CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
..|...+.||+|+||.||++... .+..||||.+... +.+.+|++++.+++|||||++++++...+..++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 35777789999999999999753 3578999988542 245689999999999999999999999999999999
Q ss_pred ccccCcHHHHH
Q 004953 701 LYIYLFIFQFS 711 (722)
Q Consensus 701 y~~~G~L~~~l 711 (722)
|+. ++|.+++
T Consensus 167 ~~~-~~l~~~l 176 (392)
T PHA03207 167 KYK-CDLFTYV 176 (392)
T ss_pred hcC-CCHHHHH
Confidence 996 6777665
No 395
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.45 E-value=8.3e-07 Score=91.62 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=64.3
Q ss_pred hcCccCCCee--ecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEE
Q 004953 623 TNNFNSSTQI--GQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 623 t~~f~~~~~i--G~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.++|...+.+ |+|+||.||++.. .++..+|+|......... .|+.....+ +|+|++++++++..++..++|
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv 87 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI 87 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence 3455555555 9999999999985 457889999986432111 122222222 799999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+++|+|.+++.+
T Consensus 88 ~e~~~~~~L~~~l~~ 102 (267)
T PHA03390 88 MDYIKDGDLFDLLKK 102 (267)
T ss_pred EEcCCCCcHHHHHHh
Confidence 999999999888655
No 396
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.45 E-value=4.1e-07 Score=97.33 Aligned_cols=88 Identities=22% Similarity=0.364 Sum_probs=70.5
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQ 695 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~ 695 (722)
+++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++.+++|+|||++++++...+ ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 35688889999999999999985 468999999986432 223456889999999999999999999876543 57
Q ss_pred EEEecccccCcHHHHH
Q 004953 696 VLPLKLYIYLFIFQFS 711 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l 711 (722)
++|+||+++ ++.+++
T Consensus 84 ~lv~e~~~~-~l~~~~ 98 (336)
T cd07849 84 YIVQELMET-DLYKLI 98 (336)
T ss_pred EEEehhccc-CHHHHH
Confidence 999999974 665543
No 397
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.45 E-value=7.5e-07 Score=92.49 Aligned_cols=83 Identities=23% Similarity=0.211 Sum_probs=64.0
Q ss_pred eeecCCCeeEEEEEe-CCCcEEEEEEccCCCh---hcHHHHHHHHH---HHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 631 QIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~---~~~~~f~~E~~---~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+||+|+||.||++.. .+++.||+|.+..... .....+..|.. .+....||+|+++.+++..++..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 4588999999864321 11223445544 3445689999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+|+|.+++.+
T Consensus 81 g~~L~~~l~~ 90 (278)
T cd05606 81 GGDLHYHLSQ 90 (278)
T ss_pred CCcHHHHHHh
Confidence 9999877643
No 398
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.44 E-value=3.3e-07 Score=97.68 Aligned_cols=85 Identities=25% Similarity=0.381 Sum_probs=71.0
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQVL 697 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~~L 697 (722)
|...+.||+|+||.||+|... .|..||||++.... ....+.+.+|++++.+++|+||+++.+++...+ ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 566789999999999999965 48999999986543 233467999999999999999999999998765 7899
Q ss_pred EecccccCcHHHHH
Q 004953 698 PLKLYIYLFIFQFS 711 (722)
Q Consensus 698 v~ey~~~G~L~~~l 711 (722)
||||++ ++|.+++
T Consensus 82 v~e~~~-~~l~~~l 94 (330)
T cd07834 82 VTELME-TDLHKVI 94 (330)
T ss_pred Eecchh-hhHHHHH
Confidence 999998 4676654
No 399
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.44 E-value=7.9e-07 Score=92.49 Aligned_cols=87 Identities=28% Similarity=0.387 Sum_probs=68.0
Q ss_pred ccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCCh--hcHHHHHHHHHHHHhc---CCCcccceEEEEEeCCe-----
Q 004953 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGE----- 694 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l---~H~Niv~l~g~~~~~~~----- 694 (722)
|+..+.||+|+||.||+|+... +..||+|+++.... .....+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 3456789999999999999764 89999999964322 1234577788777665 69999999999988776
Q ss_pred EEEEecccccCcHHHHHHH
Q 004953 695 QVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 695 ~~Lv~ey~~~G~L~~~l~~ 713 (722)
.+++|||++ ++|.+++.+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~ 98 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSK 98 (287)
T ss_pred eEEEehhcc-cCHHHHHHH
Confidence 999999997 477766544
No 400
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.43 E-value=5e-07 Score=93.76 Aligned_cols=86 Identities=27% Similarity=0.406 Sum_probs=71.9
Q ss_pred cCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh--hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccc
Q 004953 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
+..+.||+|++|.||++... +|..+|+|+++.... ...+.+.+|++++++++|+||+++++++..++..++|+||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 44578999999999999864 688999999865432 234578899999999999999999999999999999999998
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
+ ++.+++.+
T Consensus 82 ~-~l~~~l~~ 90 (283)
T cd05118 82 T-DLYKLIKD 90 (283)
T ss_pred C-CHHHHHHh
Confidence 5 77666544
No 401
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.43 E-value=3.4e-07 Score=97.87 Aligned_cols=87 Identities=21% Similarity=0.314 Sum_probs=70.4
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEe----CCeEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQV 696 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~----~~~~~ 696 (722)
++|+..+.||+|+||.||+|.. .+|..||+|++.... ....+.+.+|+.++.+++|+|||++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 5677788999999999999985 468999999986532 2234567889999999999999999998763 34689
Q ss_pred EEecccccCcHHHHH
Q 004953 697 LPLKLYIYLFIFQFS 711 (722)
Q Consensus 697 Lv~ey~~~G~L~~~l 711 (722)
+|+||+. |+|.+++
T Consensus 85 lv~e~~~-~~l~~~~ 98 (334)
T cd07855 85 VVMDLME-SDLHHII 98 (334)
T ss_pred EEEehhh-hhHHHHh
Confidence 9999996 5776654
No 402
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.43 E-value=7.5e-07 Score=93.39 Aligned_cols=85 Identities=24% Similarity=0.399 Sum_probs=68.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCCh-hcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEec
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
++|+..+.||+|+||.||+|...+ +..||||.++.... ....++..|+.++.+.+ |+||++++|+|.++...++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 456677899999999999999865 88999999865332 23456778888787775 9999999999999999999999
Q ss_pred ccccCcHHH
Q 004953 701 LYIYLFIFQ 709 (722)
Q Consensus 701 y~~~G~L~~ 709 (722)
|+++ .+.+
T Consensus 95 ~~~~-~l~~ 102 (296)
T cd06618 95 LMST-CLDK 102 (296)
T ss_pred ccCc-CHHH
Confidence 9864 4433
No 403
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=3.6e-08 Score=112.83 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=78.6
Q ss_pred HHHHHHhhcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEe
Q 004953 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (722)
Q Consensus 616 ~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~ 691 (722)
..++....++|...++||+|+||.|.....+ .++.+|.|++..+.. ....-|..|-.+|..-..+-||+|+-.+.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455556678999999999999999999864 588999999965322 122348889999999999999999999999
Q ss_pred CCeEEEEecccccCcHHHH
Q 004953 692 EGEQVLPLKLYIYLFIFQF 710 (722)
Q Consensus 692 ~~~~~Lv~ey~~~G~L~~~ 710 (722)
+.+.|+|||||+||||...
T Consensus 147 ~~~LYlVMdY~pGGDlltL 165 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTL 165 (1317)
T ss_pred ccceEEEEecccCchHHHH
Confidence 9999999999999999543
No 404
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.41 E-value=9e-07 Score=95.39 Aligned_cols=88 Identities=19% Similarity=0.300 Sum_probs=70.4
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeC------C
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~------~ 693 (722)
.++|+..+.||+|+||.||++.. .+|..||||.+... .....+++.+|+.++.+++|+||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 46688889999999999999985 46899999998642 222345688899999999999999999998643 3
Q ss_pred eEEEEecccccCcHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l 711 (722)
..++|+||+.+ +|.+++
T Consensus 95 ~~~lv~e~~~~-~l~~~~ 111 (353)
T cd07850 95 DVYLVMELMDA-NLCQVI 111 (353)
T ss_pred cEEEEEeccCC-CHHHHH
Confidence 57999999964 666543
No 405
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=5.4e-08 Score=104.45 Aligned_cols=82 Identities=22% Similarity=0.300 Sum_probs=70.1
Q ss_pred CCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 629 STQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
.-.+|.|+||.|||++-++ +-..|-|.+........++|.-|++||+..+||+||+|++.|..++..+++.|||.||..
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV 116 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV 116 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence 3468999999999998654 445678888766666667899999999999999999999999999999999999999987
Q ss_pred HHH
Q 004953 708 FQF 710 (722)
Q Consensus 708 ~~~ 710 (722)
...
T Consensus 117 Dai 119 (1187)
T KOG0579|consen 117 DAI 119 (1187)
T ss_pred hHH
Confidence 443
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.38 E-value=1.8e-06 Score=84.51 Aligned_cols=82 Identities=28% Similarity=0.409 Sum_probs=71.9
Q ss_pred eecCCCeeEEEEEeCC-CcEEEEEEccCCChh-cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHHH
Q 004953 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIFQ 709 (722)
Q Consensus 632 iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~~ 709 (722)
||+|++|.||++...+ +..++||+....... ..+.+.+|++.+.+++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 889999999765432 34679999999999999999999999999999999999999999988
Q ss_pred HHHH
Q 004953 710 FSIK 713 (722)
Q Consensus 710 ~l~~ 713 (722)
++.+
T Consensus 81 ~~~~ 84 (215)
T cd00180 81 LLKE 84 (215)
T ss_pred HHHh
Confidence 8754
No 407
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.35 E-value=7.3e-07 Score=90.78 Aligned_cols=81 Identities=25% Similarity=0.364 Sum_probs=66.1
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccC--CChhcHHHHHHHHHHHHhcCCCcccceEEEEEe-----CCe
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EGE 694 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~--~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~-----~~~ 694 (722)
...|...+.||+|+||.|.++.. ++|..||||++.. ......+.-.+|++++..++|+|||.+...... -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 34455567899999999999985 5689999999963 233345677899999999999999999998875 357
Q ss_pred EEEEecccc
Q 004953 695 QVLPLKLYI 703 (722)
Q Consensus 695 ~~Lv~ey~~ 703 (722)
.|+|+|+|+
T Consensus 101 vYiV~elMe 109 (359)
T KOG0660|consen 101 VYLVFELME 109 (359)
T ss_pred eEEehhHHh
Confidence 899999994
No 408
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.34 E-value=8e-07 Score=93.67 Aligned_cols=82 Identities=26% Similarity=0.350 Sum_probs=66.1
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChh--cHHHHHHHHHHHHhcCCCcccceEEEEEeCC------
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~--~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~------ 693 (722)
.++|+..+.||+|+||.||+|... +++.||||++...... ....+.+|++++.+++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 457888889999999999999964 5889999998543222 2245789999999999999999999875533
Q ss_pred --eEEEEeccccc
Q 004953 694 --EQVLPLKLYIY 704 (722)
Q Consensus 694 --~~~Lv~ey~~~ 704 (722)
..++|+||+++
T Consensus 87 ~~~~~lv~~~~~~ 99 (311)
T cd07866 87 RGSVYMVTPYMDH 99 (311)
T ss_pred CceEEEEEecCCc
Confidence 46999999975
No 409
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.34 E-value=1.4e-06 Score=85.60 Aligned_cols=81 Identities=16% Similarity=0.144 Sum_probs=63.7
Q ss_pred eeecCCCeeEEEEEeCCCcEEEEEEccCCCh---h-----cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEeccc
Q 004953 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSL---Q-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 631 ~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~---~-----~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
.||+|+||.||+|.+ +|..|+||....... . ..+.+.+|++++.+++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 678899998643211 1 1245789999999999988776666777777789999999
Q ss_pred ccCcHHHHHH
Q 004953 703 IYLFIFQFSI 712 (722)
Q Consensus 703 ~~G~L~~~l~ 712 (722)
++++|.+++.
T Consensus 80 ~g~~l~~~~~ 89 (199)
T TIGR03724 80 EGKPLKDVIE 89 (199)
T ss_pred CCccHHHHHh
Confidence 9999986643
No 410
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.33 E-value=7.6e-07 Score=86.64 Aligned_cols=77 Identities=21% Similarity=0.118 Sum_probs=56.0
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCChh--c-------HHHH-----------------HHHHHHHHhcCCCccc
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--G-------EKEF-----------------LTEIQFLSRLHHRNLV 683 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~--~-------~~~f-----------------~~E~~~l~~l~H~Niv 683 (722)
..||+|+||.||+|..++|+.||||+++..... . ...| ..|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999878999999999654211 1 1122 3499999999888775
Q ss_pred ceEEEEEeCCeEEEEecccccCcHH
Q 004953 684 SLVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 684 ~l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
....+.. ...++||||++++++.
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~ 105 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWA 105 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCc
Confidence 4333322 2348999999987654
No 411
>PTZ00284 protein kinase; Provisional
Probab=98.33 E-value=1.3e-06 Score=98.05 Aligned_cols=93 Identities=20% Similarity=0.384 Sum_probs=69.4
Q ss_pred HHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCC------cccceEEEEE
Q 004953 618 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR------NLVSLVGYCD 690 (722)
Q Consensus 618 ~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~------Niv~l~g~~~ 690 (722)
++...+++|...+.||+|+||+||+|.. ..++.||||+++... ...+++..|+.++.+++|. +++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3444567888889999999999999986 457899999986432 2234566778777777655 4889999887
Q ss_pred eC-CeEEEEecccccCcHHHHHH
Q 004953 691 EE-GEQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 691 ~~-~~~~Lv~ey~~~G~L~~~l~ 712 (722)
.+ +..++||||+ +++|.+++.
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~ 223 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIM 223 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHH
Confidence 64 5688899987 667766654
No 412
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.31 E-value=8.4e-07 Score=90.73 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=77.3
Q ss_pred HHHHhhcCccCCCeeecCCCeeEEEEEeCC------CcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCCcccceEEEEE
Q 004953 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (722)
Q Consensus 618 ~~~~~t~~f~~~~~iG~G~fG~Vy~g~l~~------g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~Niv~l~g~~~ 690 (722)
++.....++....++-+|.||+||+|.|.+ .+.|-||.++.... -+...|..|...+..+.|||+.++.|.|.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 333444567777889999999999998754 34566787765433 23456899999999999999999999998
Q ss_pred eC-CeEEEEecccccCcHHHHHHHHH
Q 004953 691 EE-GEQVLPLKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 691 ~~-~~~~Lv~ey~~~G~L~~~l~~~~ 715 (722)
++ +..+..|.|+.-|+|..|++..+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr 383 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICR 383 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhc
Confidence 75 56899999999999999999644
No 413
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.31 E-value=2e-06 Score=85.27 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=67.4
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCChh--------cHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~--------~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+.||+|++|.||+|.. .|..|+||+....... ....+.+|++++.+++|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 6778999986543211 123588999999999999998888888888888999999
Q ss_pred cccCcHHHHHH
Q 004953 702 YIYLFIFQFSI 712 (722)
Q Consensus 702 ~~~G~L~~~l~ 712 (722)
+++++|.+++.
T Consensus 81 ~~G~~L~~~~~ 91 (211)
T PRK14879 81 IEGEPLKDLIN 91 (211)
T ss_pred eCCcCHHHHHH
Confidence 99999987764
No 414
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.31 E-value=1.6e-08 Score=110.25 Aligned_cols=15 Identities=40% Similarity=0.541 Sum_probs=9.5
Q ss_pred ccceeEEEcCCCCCc
Q 004953 81 YLHLRELQLLNLNLS 95 (722)
Q Consensus 81 ~~~l~~L~L~~~~l~ 95 (722)
|..|+.|.+.++.++
T Consensus 108 F~sLr~LElrg~~L~ 122 (1096)
T KOG1859|consen 108 FRSLRVLELRGCDLS 122 (1096)
T ss_pred ccceeeEEecCcchh
Confidence 456677777666654
No 415
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.30 E-value=2.8e-07 Score=89.81 Aligned_cols=90 Identities=18% Similarity=0.214 Sum_probs=74.3
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh-----h---cHHHHHHHHHHHHhc-CCCcccceEEEEEeCC
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-----Q---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~-----~---~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~ 693 (722)
+.|...+++|+|..+.|.++.. ++|...|||++..... . -.++-.+|+.+++++ -||+|+++.++|.++.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 3466778999999999988875 4688999999853221 1 123467899999998 8999999999999999
Q ss_pred eEEEEecccccCcHHHHHHH
Q 004953 694 EQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 694 ~~~Lv~ey~~~G~L~~~l~~ 713 (722)
..++|+|.|+.|+|+||+..
T Consensus 97 F~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred hhhhhhhhcccchHHHHhhh
Confidence 99999999999999999754
No 416
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.30 E-value=3.3e-07 Score=94.73 Aligned_cols=88 Identities=23% Similarity=0.217 Sum_probs=70.1
Q ss_pred CCCeeecCCCeeEEEEE-eCCCcEEEEEEccCC--ChhcH-----HHHHHHHHHHHhcCCCcccceEEEEEe-CCeEEEE
Q 004953 628 SSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGE-----KEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQVLP 698 (722)
Q Consensus 628 ~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~--~~~~~-----~~f~~E~~~l~~l~H~Niv~l~g~~~~-~~~~~Lv 698 (722)
..+++|+|+|..|||+. +...+.||||.-... ..... +-.++|-+|-..++||.||++++|+.- .+..+-|
T Consensus 467 lLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTV 546 (775)
T KOG1151|consen 467 LLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTV 546 (775)
T ss_pred HHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceee
Confidence 34689999999999998 566789999975321 11111 236789999999999999999999975 4567889
Q ss_pred ecccccCcHHHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIKLI 715 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~~~ 715 (722)
+||+++-+|.-|+++..
T Consensus 547 LEYceGNDLDFYLKQhk 563 (775)
T KOG1151|consen 547 LEYCEGNDLDFYLKQHK 563 (775)
T ss_pred eeecCCCchhHHHHhhh
Confidence 99999999999988743
No 417
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.30 E-value=7.9e-07 Score=95.45 Aligned_cols=89 Identities=19% Similarity=0.308 Sum_probs=71.8
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC--hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCe-----
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~----- 694 (722)
.++|...+.||+|+||.||+|... ++..||||++.... ....+.+.+|+.++++++|+|++++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 456777899999999999999974 57899999986432 2233567889999999999999999998876554
Q ss_pred -EEEEecccccCcHHHHHH
Q 004953 695 -QVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 695 -~~Lv~ey~~~G~L~~~l~ 712 (722)
.++|+||+ +++|.+++.
T Consensus 94 ~~~lv~e~~-~~~L~~~~~ 111 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVK 111 (343)
T ss_pred cEEEEEecC-CCCHHHHHh
Confidence 89999998 568877653
No 418
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.30 E-value=1.9e-06 Score=86.63 Aligned_cols=78 Identities=27% Similarity=0.397 Sum_probs=68.4
Q ss_pred CCeeEEEEEeCC-CcEEEEEEccCCChhc-HHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHHHHHHH
Q 004953 636 GYGKVYKGILPD-GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 636 ~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~-~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
+||.||+|+..+ |..+|+|++....... .+.|.+|++.+++++|+|+++++|++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999764 8999999997654433 57899999999999999999999999999999999999999999887644
No 419
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.29 E-value=8e-08 Score=104.27 Aligned_cols=87 Identities=21% Similarity=0.258 Sum_probs=75.6
Q ss_pred hcCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
.++|.....+|+|.||.|||++ ...+...|||.++-....+.....+|+-++...+|+|||.++|.|...+..++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 3456667889999999999998 456899999999876555556678899999999999999999999999999999999
Q ss_pred cccCcHHH
Q 004953 702 YIYLFIFQ 709 (722)
Q Consensus 702 ~~~G~L~~ 709 (722)
+.+|+|.+
T Consensus 94 cgggslQd 101 (829)
T KOG0576|consen 94 CGGGSLQD 101 (829)
T ss_pred cCCCcccc
Confidence 99999844
No 420
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.28 E-value=1.3e-07 Score=93.36 Aligned_cols=196 Identities=21% Similarity=0.218 Sum_probs=114.4
Q ss_pred eEEEcCCCCCccccC-ccc-cCCCCCCEEECCCCCCccC--CCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEE
Q 004953 85 RELQLLNLNLSGNLS-PEI-GRLSYLTILDFMWNKISGS--IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 85 ~~L~L~~~~l~~~~~-~~~-~~l~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 160 (722)
.-|.+.++.|....- ..| ...+.++.|||.+|.|+.. +..-+.+|+.|++|+|+.|.+...+-..-..+.+|+.|-
T Consensus 48 ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lV 127 (418)
T KOG2982|consen 48 ELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLV 127 (418)
T ss_pred hhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEE
Confidence 344555555543211 122 3467889999999998742 333457899999999999998854433224567899999
Q ss_pred cccCCCCCC-CchhhcCcCCCCEEECCCccccCCCCc------------CCCCCCccceeecccCCCCCCCCccCCCCCC
Q 004953 161 IDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIPP------------ELSRLPSLVHMLLDNNNLTGYLPPELSELPK 227 (722)
Q Consensus 161 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~------------~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 227 (722)
|.+..+... ....+..++.+++|+++.|.+....-+ .+...+.+..+.++-|++... +|+
T Consensus 128 LNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpn 200 (418)
T KOG2982|consen 128 LNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPN 200 (418)
T ss_pred EcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------ccc
Confidence 988887643 234566788888888888854321100 111122333333333333322 345
Q ss_pred CcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCC--CCCCCCCCccEEEccCCCCC
Q 004953 228 LLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM--PDLSRIPNLGYLDLSSNQLN 287 (722)
Q Consensus 228 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~l~~l~~L~~L~Ls~N~l~ 287 (722)
+..+-+..|.+........+..++.+..|+|+.|+|.... ..+.+++.|..|.+++|.+.
T Consensus 201 v~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 201 VNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred chheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 6666666666654333444555666666666666665422 23556666666666666654
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.27 E-value=2.3e-06 Score=84.71 Aligned_cols=87 Identities=13% Similarity=-0.016 Sum_probs=70.8
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHH---------HHHHHHHHHHhcCCCcccceEEEEEeC-
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK---------EFLTEIQFLSRLHHRNLVSLVGYCDEE- 692 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~---------~f~~E~~~l~~l~H~Niv~l~g~~~~~- 692 (722)
.++|...+++|.|+||.||.... ++..+|||.+++.....++ .|.+|+..+.+++|++|.....+....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 56788899999999999999765 5778999999754332222 268999999999999999999886543
Q ss_pred -------CeEEEEecccccCcHHHH
Q 004953 693 -------GEQVLPLKLYIYLFIFQF 710 (722)
Q Consensus 693 -------~~~~Lv~ey~~~G~L~~~ 710 (722)
+..+|||||++|.+|.++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~ 133 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDM 133 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHh
Confidence 358999999999999775
No 422
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.27 E-value=2.3e-06 Score=97.35 Aligned_cols=87 Identities=15% Similarity=0.117 Sum_probs=67.0
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEE-ccCC-Ch------hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKR-AQEG-SL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~-l~~~-~~------~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~ 695 (722)
..|...+.||+|+||.||+|.+.+.. +++|+ .... .. ...+.+.+|++++.+++|++++....++..+...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456789999999999999985543 44433 2111 11 1124588999999999999999988888887888
Q ss_pred EEEecccccCcHHHHH
Q 004953 696 VLPLKLYIYLFIFQFS 711 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l 711 (722)
++||||+++++|.+++
T Consensus 412 ~lv~E~~~g~~L~~~l 427 (535)
T PRK09605 412 TIVMEYIGGKDLKDVL 427 (535)
T ss_pred EEEEEecCCCcHHHHH
Confidence 9999999999999877
No 423
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.25 E-value=6e-07 Score=97.41 Aligned_cols=88 Identities=18% Similarity=0.282 Sum_probs=68.1
Q ss_pred CCCeeecCCCeeEEEEEeC-CCcEEEEEE--ccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC--eEEEEec
Q 004953 628 SSTQIGQGGYGKVYKGILP-DGTVVAVKR--AQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQVLPLK 700 (722)
Q Consensus 628 ~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~--l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~--~~~Lv~e 700 (722)
...+||+|+|-+||||.-. .|..||=-. ++.- .....+.|..|+++|+.++|+|||+++.+..+.. ..-+|.|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3468999999999999853 476776322 2211 2233467999999999999999999999988754 4778999
Q ss_pred ccccCcHHHHHHHHH
Q 004953 701 LYIYLFIFQFSIKLI 715 (722)
Q Consensus 701 y~~~G~L~~~l~~~~ 715 (722)
.|..|+|.+|+++++
T Consensus 124 L~TSGtLr~Y~kk~~ 138 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHR 138 (632)
T ss_pred cccCCcHHHHHHHhc
Confidence 999999999887743
No 424
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.23 E-value=2.3e-07 Score=107.89 Aligned_cols=91 Identities=24% Similarity=0.289 Sum_probs=76.4
Q ss_pred hcCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+-+++..+.||.|.||.||-|. .++|...|||-++-. ..+..+...+|+.++..++|||+|+.+|.-..++..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4456778899999999999998 567899999987532 2233356889999999999999999999999999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
|||++|+|.+.++.
T Consensus 1314 EyC~~GsLa~ll~~ 1327 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEH 1327 (1509)
T ss_pred HHhccCcHHHHHHh
Confidence 99999999776544
No 425
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.21 E-value=2.1e-06 Score=96.99 Aligned_cols=88 Identities=18% Similarity=0.319 Sum_probs=63.7
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCC--CcEEEEEEcc-----------------CCChhcHHHHHHHHHHHHhcCCCccc
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQ-----------------EGSLQGEKEFLTEIQFLSRLHHRNLV 683 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~--g~~vAVK~l~-----------------~~~~~~~~~f~~E~~~l~~l~H~Niv 683 (722)
.++|...+.||+|+||+||++..+. +..+++|.+. .........|.+|+++|.+++|+|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4578888999999999999987532 2222222110 01112234688999999999999999
Q ss_pred ceEEEEEeCCeEEEEecccccCcHHHHH
Q 004953 684 SLVGYCDEEGEQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 684 ~l~g~~~~~~~~~Lv~ey~~~G~L~~~l 711 (722)
++++++..++..++|+||+. +++.+++
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l 253 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFM 253 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHH
Confidence 99999999999999999885 3555443
No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.16 E-value=7.7e-06 Score=79.72 Aligned_cols=76 Identities=21% Similarity=0.081 Sum_probs=57.6
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCChh--c------------------------HHHHHHHHHHHHhcCCCccc
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--G------------------------EKEFLTEIQFLSRLHHRNLV 683 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~--~------------------------~~~f~~E~~~l~~l~H~Niv 683 (722)
..||+|+||+||+|...+|+.||||.++..... . ...+..|.+.+.+++|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999778999999998754211 0 11245789999999999986
Q ss_pred ceEEEEEeCCeEEEEecccccCcH
Q 004953 684 SLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 684 ~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
....+... ..++||||++++++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~ 104 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGS 104 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCc
Confidence 55554433 34899999998854
No 427
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.15 E-value=5.8e-06 Score=88.29 Aligned_cols=85 Identities=24% Similarity=0.234 Sum_probs=65.5
Q ss_pred ccCCCeeecCCCeeEEEEEeC-C--CcEEEEEEccCCC--hhcHHHHHHHHHHHHhc-CCCcccceEEEEEeC----CeE
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-D--GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE----GEQ 695 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~--g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~----~~~ 695 (722)
|+..+.||+|+||.||++... . +..||||++.... ....+.+.+|++++.++ .|||||++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 556678999999999999964 3 7789999986432 12245688999999999 599999999986543 357
Q ss_pred EEEecccccCcHHHHH
Q 004953 696 VLPLKLYIYLFIFQFS 711 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l 711 (722)
++++||+. ++|.+++
T Consensus 82 ~~~~e~~~-~~L~~~l 96 (332)
T cd07857 82 YLYEELME-ADLHQII 96 (332)
T ss_pred EEEEeccc-CCHHHHH
Confidence 88888886 5776665
No 428
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.14 E-value=8.8e-07 Score=86.29 Aligned_cols=75 Identities=28% Similarity=0.449 Sum_probs=63.8
Q ss_pred CCeeecCCCeeEEEEEe-CCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEecccc
Q 004953 629 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
...||.|+||+|+|-.. +.|+..|||+++.... .++++|..|.++..+- ..||||+++|.+..++..|+-||.|.
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 35799999999999885 5699999999976543 4567899999775554 88999999999999999999999996
No 429
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.11 E-value=2.8e-06 Score=91.05 Aligned_cols=90 Identities=22% Similarity=0.383 Sum_probs=70.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCCh------hc--HHHHHHHHHHHHhcC---CCcccceEEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL------QG--EKEFLTEIQFLSRLH---HRNLVSLVGYCDE 691 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~------~~--~~~f~~E~~~l~~l~---H~Niv~l~g~~~~ 691 (722)
.+|.....+|+|+||+|+.+..+. ...|.||++..... .+ ....-.|+.||..++ |+||++++.++.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 356777899999999999999754 56789999854311 11 123567999999997 9999999999999
Q ss_pred CCeEEEEeccc-ccCcHHHHHHH
Q 004953 692 EGEQVLPLKLY-IYLFIFQFSIK 713 (722)
Q Consensus 692 ~~~~~Lv~ey~-~~G~L~~~l~~ 713 (722)
+++.||++|-. ++.+|++|+..
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~ 663 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEF 663 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhc
Confidence 99999999955 56699988643
No 430
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.10 E-value=3e-07 Score=89.69 Aligned_cols=162 Identities=17% Similarity=0.183 Sum_probs=80.6
Q ss_pred CCCCCCCcEEEcccCCCCCCCch----hhcCcCCCCEEECCCccccCCCCc-------------CCCCCCccceeecccC
Q 004953 150 LGYLPKLDRIQIDQNYISGSLPK----SFANLNKTRHFHMNNNSISGQIPP-------------ELSRLPSLVHMLLDNN 212 (722)
Q Consensus 150 ~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~~~-------------~l~~l~~L~~L~L~~N 212 (722)
+-++|+|+..+|++|.+....|. .++.-+.|++|.|++|.+...-.. ...+-|.|+.+....|
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 34455556666665555444332 234445566666666655311110 1223456666666666
Q ss_pred CCCCCCCc----cCCCCCCCcEEECcCCCCCCCCc----chhccCCCCCcEEEccCCCCccCCC-----CCCCCCCccEE
Q 004953 213 NLTGYLPP----ELSELPKLLILQLDNNNFEGTTI----PASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYL 279 (722)
Q Consensus 213 ~l~~~~~~----~l~~l~~L~~L~l~~N~l~~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L 279 (722)
++...... .+..-.+|+.+.+..|.|.-..+ -..+..+.+|+.|||++|-++-... .+..++.|+.|
T Consensus 168 Rlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL 247 (388)
T COG5238 168 RLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLREL 247 (388)
T ss_pred hhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhc
Confidence 66522111 11222466667777766642100 1123446667777777776653221 24555666777
Q ss_pred EccCCCCCccCCCc-------cccCCcCEEEccCCcCcc
Q 004953 280 DLSSNQLNGSIPPG-------RLSLNITTIKLSNNKLTG 311 (722)
Q Consensus 280 ~Ls~N~l~~~ip~~-------~~~~~L~~L~L~~N~l~~ 311 (722)
.+.+|-++..-... .+.++|..|.+.+|.+.+
T Consensus 248 ~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 248 RLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred cccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 77666655322211 122456666666666554
No 431
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.09 E-value=7e-06 Score=83.03 Aligned_cols=74 Identities=20% Similarity=0.086 Sum_probs=61.8
Q ss_pred CCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcHHHHHHH
Q 004953 635 GGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 635 G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L~~~l~~ 713 (722)
|.||.||++.- .+++.||+|++.... ++..|...+....|||++++++++...+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 78999999985 468899999986432 344566666677899999999999999999999999999999888754
No 432
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.09 E-value=5.4e-06 Score=90.83 Aligned_cols=87 Identities=21% Similarity=0.340 Sum_probs=69.2
Q ss_pred CccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcC-C-----CcccceEEEEEeCCeEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-----RNLVSLVGYCDEEGEQVL 697 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~Niv~l~g~~~~~~~~~L 697 (722)
.|...++||+|.||+|.||.- .+++.||||+++.... -..+-..|+.+|..++ | -|+|++++|+.-.+..+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 567788999999999999984 5699999999975422 1234567999999997 4 389999999999999999
Q ss_pred EecccccCcHHHHHHH
Q 004953 698 PLKLYIYLFIFQFSIK 713 (722)
Q Consensus 698 v~ey~~~G~L~~~l~~ 713 (722)
|+|.+.. +|.+|+++
T Consensus 266 VfELL~~-NLYellK~ 280 (586)
T KOG0667|consen 266 VFELLST-NLYELLKN 280 (586)
T ss_pred eehhhhh-hHHHHHHh
Confidence 9998853 55555444
No 433
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=5.4e-07 Score=89.06 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=16.9
Q ss_pred CCCcEEEcccCCCCC--CCchhhcCcCCCCEEECCCcccc
Q 004953 154 PKLDRIQIDQNYISG--SLPKSFANLNKTRHFHMNNNSIS 191 (722)
Q Consensus 154 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~ 191 (722)
+.+++|||.+|.|+. .+...+.+|+.|+.|+++.|.+.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~ 110 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLS 110 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCC
Confidence 344444555554442 12223344455555555555544
No 434
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.05 E-value=5.7e-06 Score=58.86 Aligned_cols=38 Identities=45% Similarity=0.823 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhcCC-CCCCCCCCCCC---CCCCCCCceeecC
Q 004953 34 PIEVSALRSIKKSLVD-DYSKLSNWNRG---DPCTSNWTGVLCF 73 (722)
Q Consensus 34 ~~~~~~l~~~k~~l~~-~~~~l~~w~~~---~~C~~~w~gv~C~ 73 (722)
++|++||++||+.+.. +.+.+.+|... +|| .|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 5789999999999985 66789999854 666 79999994
No 435
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.05 E-value=1.6e-06 Score=100.60 Aligned_cols=78 Identities=28% Similarity=0.402 Sum_probs=60.4
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC-hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
..+|++-..+|+|+||.|||++-+ ||+.+|||++.-.. .+......+|++++++++|||||+.+....+.....-++|
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356777789999999999999843 89999999996543 2223457889999999999999998887766544443433
No 436
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.03 E-value=1.5e-06 Score=86.84 Aligned_cols=90 Identities=21% Similarity=0.222 Sum_probs=74.8
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHH---HHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~---f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
++|+..+++|+|.||+|..+.- ..|+.+|+|.++..-.-+..+ -..|-+++...+||-+..|...+...+....||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 5677788999999999998874 468999999997643322223 467889999999999999998889999999999
Q ss_pred cccccCcHHHHHHH
Q 004953 700 KLYIYLFIFQFSIK 713 (722)
Q Consensus 700 ey~~~G~L~~~l~~ 713 (722)
||..+|+|+-++.+
T Consensus 248 eyanGGeLf~HLsr 261 (516)
T KOG0690|consen 248 EYANGGELFFHLSR 261 (516)
T ss_pred EEccCceEeeehhh
Confidence 99999999766655
No 437
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.03 E-value=3.5e-06 Score=91.12 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=76.1
Q ss_pred cCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcH---HHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~---~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
.-|...+.||-|+||+|..+. .+....+|.|.++....-.+ .-..+|-.||+..+.+-||+|+-.+.+.+..|.||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 357778899999999999887 44566789999965433222 23678999999999999999999999999999999
Q ss_pred cccccCcHHHHHHHHH
Q 004953 700 KLYIYLFIFQFSIKLI 715 (722)
Q Consensus 700 ey~~~G~L~~~l~~~~ 715 (722)
||++|||+-..|+++-
T Consensus 709 dYIPGGDmMSLLIrmg 724 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG 724 (1034)
T ss_pred eccCCccHHHHHHHhc
Confidence 9999999988887753
No 438
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.01 E-value=2.8e-07 Score=80.93 Aligned_cols=129 Identities=25% Similarity=0.314 Sum_probs=89.0
Q ss_pred CcEEEccCCCCccCCC---CCCCCCCccEEEccCCCCCccCCCcccc--CCcCEEEccCCcCcccCCccCCCCCCCCEEe
Q 004953 253 LLKLSLRNCSLQGPMP---DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327 (722)
Q Consensus 253 L~~L~L~~N~l~~~~~---~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 327 (722)
+..++|+.|++-.... .+.....|+..+|++|.+. .+|..+.. +.++.|+|++|+|+ .+|..+..++.|+.|+
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 4455666665542211 2445566777788888887 55554222 47888899999998 5566799999999999
Q ss_pred CCCCcCcccCChhhhhhccCCCCcccEEEccCCcCCCCCCCCCCCC-ceEEEccCCcCcCCCC
Q 004953 328 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPP-NVTVRLRGNPFCLNTN 389 (722)
Q Consensus 328 L~~N~l~~~ip~~~~~~~~l~~~~L~~L~ls~N~l~~~~~~~~~~~-l~~l~l~~N~l~~~~~ 389 (722)
++.|.+. ..|.-+..+ .++-+||..+|.+..++-....++ .-...+.++||.+.++
T Consensus 107 l~~N~l~-~~p~vi~~L-----~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPL-----IKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccCccc-cchHHHHHH-----HhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCc
Confidence 9999998 667777654 567789999999988875442222 2234568888877664
No 439
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.97 E-value=2.4e-05 Score=76.84 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=60.7
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCCh--h--------------------cHHHHHHHHHHHHhcCCCc--
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--Q--------------------GEKEFLTEIQFLSRLHHRN-- 681 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~--~--------------------~~~~f~~E~~~l~~l~H~N-- 681 (722)
+...+.||+|+||.||++..++|+.||||+.+.... . ....+..|..++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 556788999999999999988899999998653210 0 0123678899999998874
Q ss_pred ccceEEEEEeCCeEEEEecccccCcHHHHH
Q 004953 682 LVSLVGYCDEEGEQVLPLKLYIYLFIFQFS 711 (722)
Q Consensus 682 iv~l~g~~~~~~~~~Lv~ey~~~G~L~~~l 711 (722)
+++.++ .+..++||||+++++|.+..
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~ 122 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVR 122 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcc
Confidence 445443 24568999999999885543
No 440
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=97.95 E-value=2.1e-06 Score=89.56 Aligned_cols=89 Identities=25% Similarity=0.280 Sum_probs=74.4
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCC---hhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
+.|..-++||+|+||.||-+..+ +|+.+|.|++.... ++++..-..|-.++.++..+-||.|-..+.+.+...+|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 45777899999999999999864 59999999985432 233445788999999999999999999999999999999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
..|.||||.-++.
T Consensus 265 tlMNGGDLkfHiy 277 (591)
T KOG0986|consen 265 TLMNGGDLKFHIY 277 (591)
T ss_pred EeecCCceeEEee
Confidence 9999999954443
No 441
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.94 E-value=1.2e-05 Score=86.16 Aligned_cols=79 Identities=25% Similarity=0.352 Sum_probs=67.5
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
.|+..+.||+||...||++.-.+.+.+|.|++... ..+....|.+|+..|.++ .|.+||+|++|-..++..|+||||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~ 441 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC 441 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence 35566889999999999999888888999887543 334456799999999999 689999999999999999999998
Q ss_pred cc
Q 004953 702 YI 703 (722)
Q Consensus 702 ~~ 703 (722)
-+
T Consensus 442 Gd 443 (677)
T KOG0596|consen 442 GD 443 (677)
T ss_pred cc
Confidence 74
No 442
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.93 E-value=3.4e-06 Score=80.47 Aligned_cols=81 Identities=19% Similarity=0.370 Sum_probs=68.2
Q ss_pred cCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcC-CCcccceEEEEEeCC--eEEEEe
Q 004953 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG--EQVLPL 699 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~--~~~Lv~ 699 (722)
++|+..+.+|+|.|++||.|. ..+...++||.+++- ..+...+|+.++..++ |||||+|++...++. ...||+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 456667889999999999998 567889999999753 3456889999999997 999999999998754 578999
Q ss_pred cccccCcH
Q 004953 700 KLYIYLFI 707 (722)
Q Consensus 700 ey~~~G~L 707 (722)
||+.+-+.
T Consensus 115 E~v~n~Df 122 (338)
T KOG0668|consen 115 EYVNNTDF 122 (338)
T ss_pred hhhccccH
Confidence 99998764
No 443
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.90 E-value=3.6e-07 Score=80.22 Aligned_cols=104 Identities=24% Similarity=0.324 Sum_probs=61.4
Q ss_pred eeEEEcCCCCCccccCc---cccCCCCCCEEECCCCCCccCCCcccc-CCCCCCEEeccCCcCCCCCCccCCCCCCCcEE
Q 004953 84 LRELQLLNLNLSGNLSP---EIGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (722)
Q Consensus 84 l~~L~L~~~~l~~~~~~---~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 159 (722)
+..++|+.+.+- -+++ .+.....|+..+|++|.+. .+|+.|. ..+.++.|+|++|.|+ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445566655543 1222 2344455666677777776 3444443 3346677777777776 556666667777777
Q ss_pred EcccCCCCCCCchhhcCcCCCCEEECCCcccc
Q 004953 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSIS 191 (722)
Q Consensus 160 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (722)
+++.|.+. ..|..+..+.+|-.|+..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 77777665 44555555666666666666654
No 444
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=1.1e-07 Score=93.77 Aligned_cols=176 Identities=18% Similarity=0.232 Sum_probs=114.8
Q ss_pred CCCEEECCCCCCccC-CCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccC-CCCCC-CchhhcCcCCCCEE
Q 004953 107 YLTILDFMWNKISGS-IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN-YISGS-LPKSFANLNKTRHF 183 (722)
Q Consensus 107 ~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L 183 (722)
.|++|||++..|+.. .-..+..+.+|+.|.|.++++...+-..+.+-.+|+.|+|+.+ .++.. ..-.+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 578888887777632 2223567788888888888888777777777788888888764 33321 12245677888888
Q ss_pred ECCCccccCCCCc-CCCC-CCccceeecccCCC--C-CCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEc
Q 004953 184 HMNNNSISGQIPP-ELSR-LPSLVHMLLDNNNL--T-GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 258 (722)
Q Consensus 184 ~L~~N~l~~~~~~-~l~~-l~~L~~L~L~~N~l--~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L 258 (722)
+++.+.++..... .... -.+|+.|++++..= . ..+......+++|..|||+.|..-....-..|.+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 8888876543211 1111 25677788877531 1 1122233567889999998765422133455677888999999
Q ss_pred cCCCCccCCC----CCCCCCCccEEEccCC
Q 004953 259 RNCSLQGPMP----DLSRIPNLGYLDLSSN 284 (722)
Q Consensus 259 ~~N~l~~~~~----~l~~l~~L~~L~Ls~N 284 (722)
+.|..- +| .+...|+|.+||.-++
T Consensus 346 sRCY~i--~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYDI--IPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcCC--ChHHeeeeccCcceEEEEeccc
Confidence 888643 33 3778899999998764
No 445
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.83 E-value=5.9e-05 Score=69.73 Aligned_cols=77 Identities=13% Similarity=0.015 Sum_probs=64.9
Q ss_pred CCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCC--CcccceEEEEEeCCeEEEEecccccCc
Q 004953 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQVLPLKLYIYLF 706 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~Niv~l~g~~~~~~~~~Lv~ey~~~G~ 706 (722)
.+.||+|.++.||++...+ ..++||....... ...+.+|+.++..++| ..+++++++...++..++++||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4679999999999999854 7899999865432 4579999999999977 589999998888888999999999987
Q ss_pred HH
Q 004953 707 IF 708 (722)
Q Consensus 707 L~ 708 (722)
+.
T Consensus 80 ~~ 81 (155)
T cd05120 80 LD 81 (155)
T ss_pred cc
Confidence 74
No 446
>smart00090 RIO RIO-like kinase.
Probab=97.81 E-value=6.7e-05 Score=75.64 Aligned_cols=81 Identities=20% Similarity=0.114 Sum_probs=58.8
Q ss_pred CccCCCeeecCCCeeEEEEE--eCCCcEEEEEEccCCChh------------------------cHHHHHHHHHHHHhcC
Q 004953 625 NFNSSTQIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 678 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~--l~~g~~vAVK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 678 (722)
.|...+.||+|+||.||+|. ..+|+.||||.++..... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999998 568999999998643210 0123568999999997
Q ss_pred CCc--ccceEEEEEeCCeEEEEecccccCcHHH
Q 004953 679 HRN--LVSLVGYCDEEGEQVLPLKLYIYLFIFQ 709 (722)
Q Consensus 679 H~N--iv~l~g~~~~~~~~~Lv~ey~~~G~L~~ 709 (722)
|.. +.+.+++ +..++||||++++++..
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~ 137 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPA 137 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccc
Confidence 643 3344432 23589999999987643
No 447
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=3.7e-07 Score=90.19 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=144.7
Q ss_pred eeEEEcCCCCCccccCccccCC--CCCCEEECCCCCCccC-CCccccC-CCCCCEEeccCCcCCCC-CCccCCCCCCCcE
Q 004953 84 LRELQLLNLNLSGNLSPEIGRL--SYLTILDFMWNKISGS-IPKEIGN-IKSLELLLLNGNELTGS-LPEELGYLPKLDR 158 (722)
Q Consensus 84 l~~L~L~~~~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~-~p~~~~~-l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~ 158 (722)
-+.+|+.+.+|. |..++.+ .....+.+...-+... +.+.+.- =+.|++|||++..|+.. +-..+..+.+|+.
T Consensus 138 W~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~ 214 (419)
T KOG2120|consen 138 WQTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKN 214 (419)
T ss_pred eeeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhh
Confidence 467888777765 4444443 2345555554333322 1122211 24599999999888732 2233567899999
Q ss_pred EEcccCCCCCCCchhhcCcCCCCEEECCCcc-ccCCC-CcCCCCCCccceeecccCCCCCCCCc-cCCC-CCCCcEEECc
Q 004953 159 IQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISGQI-PPELSRLPSLVHMLLDNNNLTGYLPP-ELSE-LPKLLILQLD 234 (722)
Q Consensus 159 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~-~l~~-l~~L~~L~l~ 234 (722)
|.|.++++...+...+++-.+|+.|+++.+. ++..- .-.+.+++.|..|+++.+.++...-. .+.+ -++|+.|+++
T Consensus 215 lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNls 294 (419)
T KOG2120|consen 215 LSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLS 294 (419)
T ss_pred ccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhh
Confidence 9999999998888899999999999999864 33111 11357889999999999987643211 1222 2588999998
Q ss_pred CCCC--CCCCcchhccCCCCCcEEEccCCCCccC--CCCCCCCCCccEEEccCCCCCccCCCccc----cCCcCEEEccC
Q 004953 235 NNNF--EGTTIPASYSNMSKLLKLSLRNCSLQGP--MPDLSRIPNLGYLDLSSNQLNGSIPPGRL----SLNITTIKLSN 306 (722)
Q Consensus 235 ~N~l--~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~----~~~L~~L~L~~ 306 (722)
+..- ....+..-...+++|..|||++|..-.. ...+.+++.|++|.++.|.. .+|.... .++|++||..+
T Consensus 295 G~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g 372 (419)
T KOG2120|consen 295 GYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFG 372 (419)
T ss_pred hhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEecc
Confidence 7532 1111223346799999999998865322 23477889999999999973 3444322 26899999866
Q ss_pred C
Q 004953 307 N 307 (722)
Q Consensus 307 N 307 (722)
+
T Consensus 373 ~ 373 (419)
T KOG2120|consen 373 C 373 (419)
T ss_pred c
Confidence 5
No 448
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.75 E-value=0.00021 Score=76.16 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=20.6
Q ss_pred ccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCC
Q 004953 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (722)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 140 (722)
+..+.+++.|++++|.++ .+|. -..+|++|.+++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc 82 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENC 82 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCC
Confidence 444577777777777666 3441 1234666666653
No 449
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.73 E-value=4.7e-05 Score=71.75 Aligned_cols=83 Identities=27% Similarity=0.319 Sum_probs=34.5
Q ss_pred CCEEECCCccccCCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEcc
Q 004953 180 TRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLR 259 (722)
Q Consensus 180 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~ 259 (722)
...+||++|.+.. -..|..++.|.+|.+.+|+|+.+.|..-.-+++|..|.+.+|.|.....-.-+..+++|++|.+-
T Consensus 44 ~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll 121 (233)
T KOG1644|consen 44 FDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLL 121 (233)
T ss_pred cceecccccchhh--cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeec
Confidence 3444444444431 12334444444445555544444333333334444444444444322112223334444444444
Q ss_pred CCCCc
Q 004953 260 NCSLQ 264 (722)
Q Consensus 260 ~N~l~ 264 (722)
+|.++
T Consensus 122 ~Npv~ 126 (233)
T KOG1644|consen 122 GNPVE 126 (233)
T ss_pred CCchh
Confidence 44443
No 450
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.69 E-value=1.1e-05 Score=78.87 Aligned_cols=180 Identities=18% Similarity=0.165 Sum_probs=94.9
Q ss_pred hhcCcCCCCEEECCCccccCCCCcC----CCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhcc
Q 004953 173 SFANLNKTRHFHMNNNSISGQIPPE----LSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS 248 (722)
Q Consensus 173 ~~~~l~~L~~L~L~~N~l~~~~~~~----l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 248 (722)
.+.++++|+..+||.|.+....|+. ++.-+.|.+|.+++|.+...--.-++. .|.. +..| .-..
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~~--la~n--------KKaa 154 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALFH--LAYN--------KKAA 154 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHHH--HHHH--------hhhc
Confidence 4557788888888888877655543 345567777777777664221111110 0000 0000 0112
Q ss_pred CCCCCcEEEccCCCCccCCC-----CCCCCCCccEEEccCCCCCccCC------CccccCCcCEEEccCCcCcccC----
Q 004953 249 NMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIP------PGRLSLNITTIKLSNNKLTGTI---- 313 (722)
Q Consensus 249 ~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~ip------~~~~~~~L~~L~L~~N~l~~~~---- 313 (722)
+-+.|+......|++..-.. .+.....|+.+.+..|.|...-- ..+...+|+.|||..|-++-..
T Consensus 155 ~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 155 DKPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred cCCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 23445555555555542111 13333456666666665541100 0012246777777777665322
Q ss_pred CccCCCCCCCCEEeCCCCcCcccCChhhhhh-ccCCCCcccEEEccCCcCCC
Q 004953 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQS-RTLNATETFILDFQNNNLTN 364 (722)
Q Consensus 314 ~~~~~~l~~L~~L~L~~N~l~~~ip~~~~~~-~~l~~~~L~~L~ls~N~l~~ 364 (722)
...+..++.|+.|.+..+-++.....++... .....++|..|-+.||...+
T Consensus 235 a~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred HHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 2345566778888888887776555554322 12345677777777776654
No 451
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.68 E-value=4.5e-05 Score=79.38 Aligned_cols=87 Identities=23% Similarity=0.342 Sum_probs=71.6
Q ss_pred HhhcCccCCCeeecCCCeeEEEEEeC----CCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeE
Q 004953 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (722)
Q Consensus 621 ~~t~~f~~~~~iG~G~fG~Vy~g~l~----~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~ 695 (722)
...+.|...+.||+|.|+.||+++.. ....||+|.+..... .....+|++.|..+ -|.||+++.++....+..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 33456788899999999999999853 467899999965432 23478999999999 689999999999999999
Q ss_pred EEEecccccCcHHH
Q 004953 696 VLPLKLYIYLFIFQ 709 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~ 709 (722)
.+|+||+++-+-.+
T Consensus 111 ~ivlp~~~H~~f~~ 124 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRD 124 (418)
T ss_pred EEEecccCccCHHH
Confidence 99999999875533
No 452
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.68 E-value=7.6e-05 Score=70.36 Aligned_cols=57 Identities=26% Similarity=0.380 Sum_probs=26.2
Q ss_pred CCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccc
Q 004953 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI 190 (722)
Q Consensus 132 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 190 (722)
...+||++|.+... +.|..+++|.+|.|++|+|+.+.|.--.-+++|+.|.|.+|+|
T Consensus 44 ~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 44 FDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred cceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcch
Confidence 34444444444311 2344445555555555555544444333344455555555544
No 453
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.66 E-value=1.3e-05 Score=82.52 Aligned_cols=90 Identities=17% Similarity=0.143 Sum_probs=70.1
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCCh-hc--HHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QG--EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~-~~--~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.+|....+||+|+||+|..|+-+. .+.+|||.++..-. ++ .+--+.|-++|+-- +.|-+|+|+.++.+.+..|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 358888999999999999998643 56799999975421 11 12235566777655 788999999999999999999
Q ss_pred ecccccCcHHHHHHH
Q 004953 699 LKLYIYLFIFQFSIK 713 (722)
Q Consensus 699 ~ey~~~G~L~~~l~~ 713 (722)
|||+.+|+|--.++|
T Consensus 429 MEyvnGGDLMyhiQQ 443 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ 443 (683)
T ss_pred EEEecCchhhhHHHH
Confidence 999999999655554
No 454
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.65 E-value=6.2e-05 Score=82.98 Aligned_cols=87 Identities=21% Similarity=0.189 Sum_probs=59.8
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhc----------------------------------------H
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------E 664 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~----------------------------------------~ 664 (722)
.|+ .+.||.|++|+||+|++++|+.||||+.++..... +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 36899999999999999999999999986542110 0
Q ss_pred HHHHHHHHHHHhcC----CCcccceEEEEEe-CCeEEEEecccccCcHHHHHH
Q 004953 665 KEFLTEIQFLSRLH----HRNLVSLVGYCDE-EGEQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 665 ~~f~~E~~~l~~l~----H~Niv~l~g~~~~-~~~~~Lv~ey~~~G~L~~~l~ 712 (722)
-+|.+|++.+.+++ |.+-|.+-..|.+ .+..+|||||+++++|.++..
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~ 250 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA 250 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence 12666777666653 3333333333332 356799999999999977654
No 455
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.59 E-value=9.9e-05 Score=84.23 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=57.1
Q ss_pred hhcCccCCCeeecCCCeeEEEEEeC-C----CcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEE------EE
Q 004953 622 ATNNFNSSTQIGQGGYGKVYKGILP-D----GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY------CD 690 (722)
Q Consensus 622 ~t~~f~~~~~iG~G~fG~Vy~g~l~-~----g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~------~~ 690 (722)
..++|...+.||+|+||.||+|+.. + +..||||++..... .+.+..| .+.+..|.+++.+... +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4567888999999999999999974 4 68999998864321 1112222 1222222222222211 24
Q ss_pred eCCeEEEEecccccCcHHHHHH
Q 004953 691 EEGEQVLPLKLYIYLFIFQFSI 712 (722)
Q Consensus 691 ~~~~~~Lv~ey~~~G~L~~~l~ 712 (722)
.++..++||||+++|+|.+++.
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~ 227 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQ 227 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHH
Confidence 5678999999999999987765
No 456
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.58 E-value=1.7e-05 Score=79.52 Aligned_cols=88 Identities=18% Similarity=0.169 Sum_probs=69.9
Q ss_pred cCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhc---HHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLP 698 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~---~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv 698 (722)
.+|...++||+|+|.+|..+.+. ..+.+|+|+++..-..+ ..-...|-.++.+. +||-+|.|..++.++...+.|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 56888899999999999999864 57889999986542222 22345676777665 899999999999999999999
Q ss_pred ecccccCcHHHHH
Q 004953 699 LKLYIYLFIFQFS 711 (722)
Q Consensus 699 ~ey~~~G~L~~~l 711 (722)
.||+++|+|--+.
T Consensus 330 ieyv~ggdlmfhm 342 (593)
T KOG0695|consen 330 IEYVNGGDLMFHM 342 (593)
T ss_pred EEEecCcceeeeh
Confidence 9999999994333
No 457
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.58 E-value=5e-05 Score=54.16 Aligned_cols=34 Identities=38% Similarity=0.593 Sum_probs=12.5
Q ss_pred CCEEECCCCCCccCCCccccCCCCCCEEeccCCcC
Q 004953 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNEL 142 (722)
Q Consensus 108 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 142 (722)
|++|++++|+|+ .+|..+++|++|++|++++|++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i 36 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPI 36 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCC
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCC
Confidence 344444444443 2232334444444444444433
No 458
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.58 E-value=5.9e-05 Score=53.79 Aligned_cols=37 Identities=46% Similarity=0.689 Sum_probs=25.6
Q ss_pred CCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCC
Q 004953 130 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYIS 167 (722)
Q Consensus 130 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 167 (722)
++|++|++++|+|+ .+|..+++|++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46777777777777 45556777777777777777776
No 459
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.57 E-value=1.3e-05 Score=78.35 Aligned_cols=81 Identities=16% Similarity=0.323 Sum_probs=65.5
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccC--CChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~--~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
..|.+...|+.|+|.+. |..+++|.+.- .+..-.++|..|...++-+.||||..++|.|..+....++..||++|+|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 45777888999999994 55566676643 2333346899999999999999999999999999999999999999999
Q ss_pred HHHH
Q 004953 708 FQFS 711 (722)
Q Consensus 708 ~~~l 711 (722)
+..+
T Consensus 275 ynvl 278 (448)
T KOG0195|consen 275 YNVL 278 (448)
T ss_pred HHHH
Confidence 6643
No 460
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.53 E-value=1.7e-06 Score=83.64 Aligned_cols=79 Identities=29% Similarity=0.475 Sum_probs=60.1
Q ss_pred ccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hc-HHHHHHHHHHHHhcCCCcccceEEEEEe--------CCe
Q 004953 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QG-EKEFLTEIQFLSRLHHRNLVSLVGYCDE--------EGE 694 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~-~~~f~~E~~~l~~l~H~Niv~l~g~~~~--------~~~ 694 (722)
|.....||+|.||+||+++.. .|+.||+|+.-.... .+ ...-.+|++++..++|+|++.++..|.. ...
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 334467999999999999864 477899987632111 11 1345789999999999999999998864 235
Q ss_pred EEEEeccccc
Q 004953 695 QVLPLKLYIY 704 (722)
Q Consensus 695 ~~Lv~ey~~~ 704 (722)
.++|++++++
T Consensus 99 ~ylVf~~ceh 108 (376)
T KOG0669|consen 99 FYLVFDFCEH 108 (376)
T ss_pred eeeeHHHhhh
Confidence 8999999986
No 461
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=97.49 E-value=3.7e-05 Score=76.45 Aligned_cols=79 Identities=15% Similarity=0.134 Sum_probs=63.5
Q ss_pred CeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEe----CCeEEEEecccc
Q 004953 630 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGEQVLPLKLYI 703 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~----~~~~~Lv~ey~~ 703 (722)
.+||-|--|.|..+.. ..|+.+|.|++... ....+|++.--.. .|||||++++.|.. ....++|||+|+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 5799999999999985 46889999998643 2346788775444 89999999999864 456889999999
Q ss_pred cCcHHHHHHH
Q 004953 704 YLFIFQFSIK 713 (722)
Q Consensus 704 ~G~L~~~l~~ 713 (722)
||+|+..+.+
T Consensus 143 GGeLfsriq~ 152 (400)
T KOG0604|consen 143 GGELFSRIQD 152 (400)
T ss_pred chHHHHHHHH
Confidence 9999887655
No 462
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.48 E-value=0.00037 Score=74.34 Aligned_cols=132 Identities=20% Similarity=0.255 Sum_probs=74.6
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCC-cCCCCCCccCCCCCCCcEEE
Q 004953 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN-ELTGSLPEELGYLPKLDRIQ 160 (722)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~ 160 (722)
.+++.|++++|.++. +| .+ -.+|++|+++++.--..+|..+ ..+|++|++++| .+. .+|. +|+.|+
T Consensus 52 ~~l~~L~Is~c~L~s-LP-~L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------sLe~L~ 118 (426)
T PRK15386 52 RASGRLYIKDCDIES-LP-VL--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------SVRSLE 118 (426)
T ss_pred cCCCEEEeCCCCCcc-cC-CC--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------ccceEE
Confidence 578999999998874 34 22 2469999999864434667655 368999999988 554 4443 477777
Q ss_pred cccCCCCCCCchhhcCc-CCCCEEECCCcccc--CCCCcCCCCCCccceeecccCCCCCCCCccCCCCCCCcEEECcCC
Q 004953 161 IDQNYISGSLPKSFANL-NKTRHFHMNNNSIS--GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNN 236 (722)
Q Consensus 161 L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N 236 (722)
+..+.... +..+ ++|+.|.+.+++.. ..+|..+ -++|++|++++|... ..|..+. .+|+.|.++.+
T Consensus 119 L~~n~~~~-----L~~LPssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 119 IKGSATDS-----IKNVPNGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred eCCCCCcc-----cccCcchHhheecccccccccccccccc--CCcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 76655431 1222 24556666433211 0011111 145666666666544 2232222 35555665544
No 463
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.48 E-value=0.00046 Score=72.24 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=52.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC----CcEEEEEEccCCChh--cH---------HHHHHHHHHHHhcCCCcccceEEE
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQ--GE---------KEFLTEIQFLSRLHHRNLVSLVGY 688 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~----g~~vAVK~l~~~~~~--~~---------~~f~~E~~~l~~l~H~Niv~l~g~ 688 (722)
..|...+.||+|+||+||+|...+ +..+|+|........ .+ .....+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 467788999999999999999754 345666654322111 00 112334455667899999999998
Q ss_pred EEeCC----eEEEEecccc
Q 004953 689 CDEEG----EQVLPLKLYI 703 (722)
Q Consensus 689 ~~~~~----~~~Lv~ey~~ 703 (722)
+.... ..++++|++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~ 110 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV 110 (294)
T ss_pred eeEecCCceEEEEEEehhc
Confidence 76543 4467777653
No 464
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.40 E-value=0.00046 Score=66.80 Aligned_cols=73 Identities=26% Similarity=0.263 Sum_probs=50.1
Q ss_pred CCeeecCCCeeEEEEEeCCCcEEEEEEccCCChh--cHHH----------------------HHHHHHHHHhcCCCc--c
Q 004953 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKE----------------------FLTEIQFLSRLHHRN--L 682 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~--~~~~----------------------f~~E~~~l~~l~H~N--i 682 (722)
.+.||+|+||+||+|...+|+.||||+.+..... .... ...|.+.+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3679999999999999878999999988643211 1111 135666777775543 4
Q ss_pred cceEEEEEeCCeEEEEecccccC
Q 004953 683 VSLVGYCDEEGEQVLPLKLYIYL 705 (722)
Q Consensus 683 v~l~g~~~~~~~~~Lv~ey~~~G 705 (722)
.+.+++ ...++||||+++|
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~ 100 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGD 100 (187)
T ss_pred CceEec----CCCEEEEEEeCCC
Confidence 444443 3458999999994
No 465
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.37 E-value=0.0007 Score=65.90 Aligned_cols=79 Identities=9% Similarity=-0.017 Sum_probs=59.9
Q ss_pred cCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChh----cHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEecc
Q 004953 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 627 ~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~----~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
.....+++|+||+||.+.- ++..++.+.+.....- ...-|.+|+++|.++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999996654 6777887777543221 1225889999999995 5889999886 446899999
Q ss_pred cccCcHHHH
Q 004953 702 YIYLFIFQF 710 (722)
Q Consensus 702 ~~~G~L~~~ 710 (722)
+++.+|.+.
T Consensus 80 I~G~~L~~~ 88 (218)
T PRK12274 80 LAGAAMYQR 88 (218)
T ss_pred ecCccHHhh
Confidence 999988643
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.37 E-value=0.00045 Score=77.30 Aligned_cols=86 Identities=17% Similarity=0.212 Sum_probs=60.8
Q ss_pred cCccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChh----------------------------------------
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ---------------------------------------- 662 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~---------------------------------------- 662 (722)
..|+. +.||+|++|+||+|++++ |+.||||++++...+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 789999999999999987 999999999754210
Q ss_pred cHHHHHHHHHHHHhcC----CCcccceEEEEEe-CCeEEEEecccccCcHHHH
Q 004953 663 GEKEFLTEIQFLSRLH----HRNLVSLVGYCDE-EGEQVLPLKLYIYLFIFQF 710 (722)
Q Consensus 663 ~~~~f~~E~~~l~~l~----H~Niv~l~g~~~~-~~~~~Lv~ey~~~G~L~~~ 710 (722)
.+-+|.+|+..+.+++ |.+.|.+-..+++ .....|||||++|+.+.++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~ 251 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV 251 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence 0012566766666553 4444544444443 4567899999999999764
No 467
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.32 E-value=0.00046 Score=62.28 Aligned_cols=59 Identities=20% Similarity=0.143 Sum_probs=20.6
Q ss_pred ccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcc
Q 004953 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (722)
Q Consensus 102 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 162 (722)
|.++++|+.+.+.. .+.......|.++++|+.+.+..+ +.......|.++++|+.+.+.
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~ 66 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFP 66 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEET
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeeccccccccccc
Confidence 44444455555442 333333334444444555544442 333333334444444444443
No 468
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.28 E-value=0.00022 Score=70.24 Aligned_cols=75 Identities=21% Similarity=0.389 Sum_probs=62.1
Q ss_pred CCeeecCCCeeEEEEEeC-CCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcC-CCcccceEEEEEeCCeEEEEecccc
Q 004953 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 629 ~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
...+|+|..|+|+++..+ .|..+|||.+.+... ++.+.....+.++.+-+ .|.||+.+||+......++-||.|.
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 356899999999999864 588999999976543 33456778888877764 8999999999999999999999985
No 469
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.21 E-value=0.00028 Score=79.48 Aligned_cols=74 Identities=28% Similarity=0.413 Sum_probs=59.2
Q ss_pred ccCCCeeecCCCee-EEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEecccc
Q 004953 626 FNSSTQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLYI 703 (722)
Q Consensus 626 f~~~~~iG~G~fG~-Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~~ 703 (722)
|...+++|.|+-|+ ||+|.+ +|+.||||++-.+.. .-..+|+..+..- .|||||+.+|.-.++...||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~---~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFF---DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHhH---HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 55567889998885 699999 688999999843221 1246899999887 89999998888778889999999885
No 470
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.14 E-value=0.001 Score=60.06 Aligned_cols=124 Identities=15% Similarity=0.191 Sum_probs=59.4
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCCchhhcCcCCCCEEECCCccccCCCCcCCCCCC
Q 004953 123 PKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLP 202 (722)
Q Consensus 123 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 202 (722)
...|.++++|+.+.+.. .+.......|.++++|+.+.+..+ +.......|.++++|+.+.+.+ .+.......|..++
T Consensus 5 ~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~ 81 (129)
T PF13306_consen 5 NNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCT 81 (129)
T ss_dssp TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-T
T ss_pred HHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccc
Confidence 34567777888888764 455555666777777888877664 5555556677777777777765 33333445566677
Q ss_pred ccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCC
Q 004953 203 SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKL 253 (722)
Q Consensus 203 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 253 (722)
+|+.+.+..+ ++......|.++ +|+.+.+.. .++. .-...|.++++|
T Consensus 82 ~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~-i~~~~F~~~~~l 128 (129)
T PF13306_consen 82 NLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITK-IEENAFKNCTKL 128 (129)
T ss_dssp TECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS-----GGG-----
T ss_pred cccccccCcc-ccEEchhhhcCC-CceEEEECC-CccE-ECCccccccccC
Confidence 7777777654 444445556665 677776654 2221 123445555444
No 471
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.09 E-value=0.0025 Score=66.71 Aligned_cols=86 Identities=27% Similarity=0.376 Sum_probs=71.5
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChh---cHHHHHHHHHHHHhcCCC-cccceEEEEEeCCeEEEEecc
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~H~-Niv~l~g~~~~~~~~~Lv~ey 701 (722)
|.....+|.|+||.||++... ..+|+|.+...... ....|.+|+.++.++.|+ +++++..++...+..++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 344578999999999999976 78999998654332 256799999999999988 799999999777778999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+.++++.++...
T Consensus 80 ~~~~~l~~~~~~ 91 (384)
T COG0515 80 VDGGSLEDLLKK 91 (384)
T ss_pred CCCCcHHHHHHh
Confidence 999999866554
No 472
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.05 E-value=0.00042 Score=65.63 Aligned_cols=81 Identities=25% Similarity=0.372 Sum_probs=64.7
Q ss_pred hcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC-ChhcHHHHHHHHHHHH-hcCCCcccceEEEEEeCCeEEEEe
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~-~l~H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
.+.......||+|++|.|-+-.+ ..|+..|||+++.. ..+.++....|+.+.. ....|.+|.++|.+.+++..++-|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34445567899999999977764 57999999999754 2344567888987754 558999999999999999999999
Q ss_pred cccc
Q 004953 700 KLYI 703 (722)
Q Consensus 700 ey~~ 703 (722)
|.|.
T Consensus 125 E~M~ 128 (282)
T KOG0984|consen 125 ELMD 128 (282)
T ss_pred HHhh
Confidence 9996
No 473
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.03 E-value=0.00033 Score=68.97 Aligned_cols=87 Identities=22% Similarity=0.371 Sum_probs=40.7
Q ss_pred cCCCCEEECCCccccCCCCcCCCCCCccceeecccC--CCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCc
Q 004953 177 LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN--NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLL 254 (722)
Q Consensus 177 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N--~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 254 (722)
+..|+.|++.+..++.. ..|..+++|++|.++.| ++.+.++.....+|+|++|++++|++....--..+..+.+|.
T Consensus 42 ~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~ 119 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLK 119 (260)
T ss_pred ccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchh
Confidence 33444444444444321 13344555566666666 444444444444566666666666654211112233444555
Q ss_pred EEEccCCCCcc
Q 004953 255 KLSLRNCSLQG 265 (722)
Q Consensus 255 ~L~L~~N~l~~ 265 (722)
.|++.+|..+.
T Consensus 120 ~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 120 SLDLFNCSVTN 130 (260)
T ss_pred hhhcccCCccc
Confidence 55555555443
No 474
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.02 E-value=0.00043 Score=75.98 Aligned_cols=86 Identities=17% Similarity=0.168 Sum_probs=68.7
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+.|.....+|.|+|+.|-++.. ++++..|||.+.... .+-.+|+.++... .|+|||++.+.|.+..+.++|||+
T Consensus 322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred hhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 3444456699999999998884 568889999996542 2335677676665 899999999999999999999999
Q ss_pred cccCcHHHHHHH
Q 004953 702 YIYLFIFQFSIK 713 (722)
Q Consensus 702 ~~~G~L~~~l~~ 713 (722)
+.+|.+.+.+++
T Consensus 398 l~g~ell~ri~~ 409 (612)
T KOG0603|consen 398 LDGGELLRRIRS 409 (612)
T ss_pred ccccHHHHHHHh
Confidence 999999766554
No 475
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.02 E-value=0.00028 Score=81.51 Aligned_cols=86 Identities=23% Similarity=0.323 Sum_probs=37.3
Q ss_pred CCCccceeecccCCCCCCCCccCCCCCCCcEEECcCCCCCCCCcchhccCCCCCcEEEccCCCCccCC-------CCCCC
Q 004953 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM-------PDLSR 272 (722)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-------~~l~~ 272 (722)
++++|..||+++.+++.. ..++.+++|+.|.+.+=.+.....-..+.++++|+.||+|..+..... ..-..
T Consensus 171 sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~ 248 (699)
T KOG3665|consen 171 SFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMV 248 (699)
T ss_pred ccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhccc
Confidence 344444444444444422 334444555555544444432111223344555555555544433211 01123
Q ss_pred CCCccEEEccCCCCC
Q 004953 273 IPNLGYLDLSSNQLN 287 (722)
Q Consensus 273 l~~L~~L~Ls~N~l~ 287 (722)
+|.|+.||.|+..+.
T Consensus 249 LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 249 LPELRFLDCSGTDIN 263 (699)
T ss_pred CccccEEecCCcchh
Confidence 455555555555444
No 476
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=96.99 E-value=0.00012 Score=84.32 Aligned_cols=135 Identities=21% Similarity=0.296 Sum_probs=82.5
Q ss_pred CCCCEEeccCCcCCCC-CCccC-CCCCCCcEEEcccCCCCCC-CchhhcCcCCCCEEECCCccccCCCCcCCCCCCccce
Q 004953 130 KSLELLLLNGNELTGS-LPEEL-GYLPKLDRIQIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 206 (722)
Q Consensus 130 ~~L~~L~L~~n~l~~~-~p~~~-~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 206 (722)
.+|++|++++...-.. -|..+ .-+|+|+.|.+.+=.+... .-....++++|..||+++.+++.. ..++.+++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 5677777776543211 11112 2367777777776555322 223445677788888888777643 55677777777
Q ss_pred eecccCCCCC-CCCccCCCCCCCcEEECcCCCCCCCC-c----chhccCCCCCcEEEccCCCCccC
Q 004953 207 MLLDNNNLTG-YLPPELSELPKLLILQLDNNNFEGTT-I----PASYSNMSKLLKLSLRNCSLQGP 266 (722)
Q Consensus 207 L~L~~N~l~~-~~~~~l~~l~~L~~L~l~~N~l~~~~-~----~~~~~~l~~L~~L~L~~N~l~~~ 266 (722)
|.+.+=.+.. ..-..+.++++|+.||+|........ + -+.-..+|+|+.||.+++.+...
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 7777665553 22235667888888888876654311 1 11234578888888888877653
No 477
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.90 E-value=0.00018 Score=70.56 Aligned_cols=95 Identities=23% Similarity=0.336 Sum_probs=70.2
Q ss_pred ccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCC--ChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCC-----eEEE
Q 004953 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQVL 697 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~-----~~~L 697 (722)
.+.++.||-|+||.||..+- ++|+.||.|++..- .....+.|.+|++++.-++|.|+...++...... +.|.
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 45678999999999998885 46999999988432 1233467899999999999999999998776532 4566
Q ss_pred Eeccccc--------------CcHHHHHHHHHhhhcc
Q 004953 698 PLKLYIY--------------LFIFQFSIKLIFAIAM 720 (722)
Q Consensus 698 v~ey~~~--------------G~L~~~l~~~~~~~a~ 720 (722)
+.|.|.- .-..-|+++|..|+-+
T Consensus 135 ~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKY 171 (449)
T KOG0664|consen 135 LTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKY 171 (449)
T ss_pred HHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHH
Confidence 7777632 1225577777777644
No 478
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.87 E-value=0.00057 Score=80.24 Aligned_cols=87 Identities=24% Similarity=0.348 Sum_probs=62.0
Q ss_pred hcCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcC---CCcccceEEEEEeCCeEEEEe
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQVLPL 699 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~---H~Niv~l~g~~~~~~~~~Lv~ 699 (722)
-+.|...+.||+|+||+||+|.-.+|+.||+|.-++...- +|.-=.++|.+++ -+-|+.+..++.-.+.-+||+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 3567778899999999999999888999999998665332 2222223455555 123444444445567789999
Q ss_pred cccccCcHHHHHH
Q 004953 700 KLYIYLFIFQFSI 712 (722)
Q Consensus 700 ey~~~G~L~~~l~ 712 (722)
||.++|+|.+++.
T Consensus 774 ey~~~Gtlld~~N 786 (974)
T KOG1166|consen 774 EYSPYGTLLDLIN 786 (974)
T ss_pred eccccccHHHhhc
Confidence 9999999988754
No 479
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=96.86 E-value=0.0043 Score=62.69 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=61.0
Q ss_pred CCeee-cCCCeeEEEEEeCCCcEEEEEEccCCCh-------------hcHHHHHHHHHHHHhcCCCcc--cceEEEEEeC
Q 004953 629 STQIG-QGGYGKVYKGILPDGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEE 692 (722)
Q Consensus 629 ~~~iG-~G~fG~Vy~g~l~~g~~vAVK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~Ni--v~l~g~~~~~ 692 (722)
..+|| .|+.|+||+.... +..++||....... .....+.+|++++.+++|+++ ++.+++...+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999884 67889987753210 122457889999999999885 7778775543
Q ss_pred C-e---EEEEeccccc-CcHHHHHH
Q 004953 693 G-E---QVLPLKLYIY-LFIFQFSI 712 (722)
Q Consensus 693 ~-~---~~Lv~ey~~~-G~L~~~l~ 712 (722)
. . .++|+||+++ ++|.+++.
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~ 139 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQ 139 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHh
Confidence 2 2 3599999997 68877643
No 480
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=96.78 E-value=0.00013 Score=77.42 Aligned_cols=89 Identities=11% Similarity=0.178 Sum_probs=72.3
Q ss_pred CccCCCeeecCCCeeEEEEEeCCC-cEEEEEEccCCCh---hcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEec
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLK 700 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g-~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~e 700 (722)
+++....+|-|+||.|-....... ..+|.|.++.... .+++-...|-.+|...+.+.||+|+-.+.+..+.|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 344556799999999988876443 3488888865322 233447789999999999999999999999999999999
Q ss_pred ccccCcHHHHHHH
Q 004953 701 LYIYLFIFQFSIK 713 (722)
Q Consensus 701 y~~~G~L~~~l~~ 713 (722)
-|-+|+||..+|+
T Consensus 501 aClGGElWTiLrd 513 (732)
T KOG0614|consen 501 ACLGGELWTILRD 513 (732)
T ss_pred hhcCchhhhhhhh
Confidence 9999999998876
No 481
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.75 E-value=0.0031 Score=67.14 Aligned_cols=85 Identities=14% Similarity=0.255 Sum_probs=64.3
Q ss_pred cCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcC-----C---CcccceEEEEEe---
Q 004953 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----H---RNLVSLVGYCDE--- 691 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~Niv~l~g~~~~--- 691 (722)
.+|...+.+|=|.|.+||.+.- ...+.||+|+.+..... .+.-..||++|.+++ | ..||+|++++..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 4577788999999999999984 45788999999754222 245789999999884 3 259999999975
Q ss_pred -CCeEEEEecccccCcHHHH
Q 004953 692 -EGEQVLPLKLYIYLFIFQF 710 (722)
Q Consensus 692 -~~~~~Lv~ey~~~G~L~~~ 710 (722)
+....+|+||+. -.|..+
T Consensus 157 NG~HVCMVfEvLG-dnLLkl 175 (590)
T KOG1290|consen 157 NGQHVCMVFEVLG-DNLLKL 175 (590)
T ss_pred CCcEEEEEehhhh-hHHHHH
Confidence 447899999984 344333
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.73 E-value=0.0022 Score=63.69 Aligned_cols=81 Identities=15% Similarity=0.230 Sum_probs=62.2
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCCh-hcHHHHHHHHHHHHhcCCC--cccceEEEEEeC---CeEEEEecccc
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE---GEQVLPLKLYI 703 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~--Niv~l~g~~~~~---~~~~Lv~ey~~ 703 (722)
+.++.|..+.||+++..+|..+++|....... ....++.+|++++..+++. .+.++++++... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999998754322 1345689999999999764 457788877653 35689999999
Q ss_pred cCcHHHH
Q 004953 704 YLFIFQF 710 (722)
Q Consensus 704 ~G~L~~~ 710 (722)
++++.+.
T Consensus 84 G~~l~~~ 90 (223)
T cd05154 84 GRVLRDR 90 (223)
T ss_pred CEecCCC
Confidence 9877543
No 483
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.66 E-value=0.00084 Score=66.16 Aligned_cols=40 Identities=25% Similarity=0.359 Sum_probs=17.6
Q ss_pred CCCCCCEEeccCC--cCCCCCCccCCCCCCCcEEEcccCCCC
Q 004953 128 NIKSLELLLLNGN--ELTGSLPEELGYLPKLDRIQIDQNYIS 167 (722)
Q Consensus 128 ~l~~L~~L~L~~n--~l~~~~p~~~~~l~~L~~L~L~~N~l~ 167 (722)
.|++|++|.++.| ++.+.++.....+|+|++|+++.|+|.
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 3444444444444 333333333333444555555544443
No 484
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.50 E-value=0.00015 Score=71.56 Aligned_cols=99 Identities=22% Similarity=0.269 Sum_probs=61.0
Q ss_pred cceeEEEcCCCCCccccCccccCCCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCC-CccCCCCCCCcEEE
Q 004953 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSL-PEELGYLPKLDRIQ 160 (722)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~ 160 (722)
..++.|++-++++.++- ...+++.|++|.||-|+|+..-| |..+++|++|+|..|.|...- -..+.++|+|+.|+
T Consensus 19 ~~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HHhhhhcccCCCccHHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 35667777777776531 24567788888888888875443 677788888888888776321 11245667777777
Q ss_pred cccCCCCCCCch-----hhcCcCCCCEEE
Q 004953 161 IDQNYISGSLPK-----SFANLNKTRHFH 184 (722)
Q Consensus 161 L~~N~l~~~~p~-----~~~~l~~L~~L~ 184 (722)
|..|.-.+.-+. .+.-|++|+.||
T Consensus 95 L~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 95 LDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hccCCcccccchhHHHHHHHHcccchhcc
Confidence 777665544332 334455555543
No 485
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=96.43 E-value=0.0067 Score=57.48 Aligned_cols=75 Identities=12% Similarity=0.011 Sum_probs=55.1
Q ss_pred CeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccc-eEEEEEeCCeEEEEecccccCcHH
Q 004953 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS-LVGYCDEEGEQVLPLKLYIYLFIF 708 (722)
Q Consensus 630 ~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~-l~g~~~~~~~~~Lv~ey~~~G~L~ 708 (722)
+.++.|.++.||++... +..|++|....... ....+..|++++..+.+.++++ ++++ ..+..++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCccc
Confidence 46789999999999874 77899998754321 1235678999999987666554 4443 333458999999998875
No 486
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.35 E-value=0.0046 Score=60.08 Aligned_cols=85 Identities=25% Similarity=0.412 Sum_probs=64.2
Q ss_pred cCccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCC-CcccceEEEEEeCCeEEEEecc
Q 004953 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQVLPLKL 701 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H-~Niv~l~g~~~~~~~~~Lv~ey 701 (722)
+.|...+.||+|+||.+|.|. ..+|..||||.=...... -+..-|.++..-++| ..|..+.-|..+..+..+|||.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 467788999999999999998 678999999976443222 246778888888876 4666777777788889999998
Q ss_pred ccc--CcHHHH
Q 004953 702 YIY--LFIFQF 710 (722)
Q Consensus 702 ~~~--G~L~~~ 710 (722)
+.- .+|+.|
T Consensus 93 LGPsLEdLfnf 103 (341)
T KOG1163|consen 93 LGPSLEDLFNF 103 (341)
T ss_pred cCccHHHHHHH
Confidence 743 244443
No 487
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=96.25 E-value=0.0025 Score=62.91 Aligned_cols=84 Identities=14% Similarity=0.216 Sum_probs=64.4
Q ss_pred CccCCCeeecCCCeeEEEEEeCC-CcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEE-EEeCCeEEEEecc
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY-CDEEGEQVLPLKL 701 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~-~~~~~~~~Lv~ey 701 (722)
.|...+.+|+|.||.+-.++.+. .+.+++|.+... ....++|.+|-.-=-.+ .|.||+.-+.. +.+.+....++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 46667899999999999998754 677899988653 23457899987554444 68999876654 4567788899999
Q ss_pred cccCcHHH
Q 004953 702 YIYLFIFQ 709 (722)
Q Consensus 702 ~~~G~L~~ 709 (722)
+|+|+|.+
T Consensus 104 aP~gdL~s 111 (378)
T KOG1345|consen 104 APRGDLRS 111 (378)
T ss_pred Cccchhhh
Confidence 99999954
No 488
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.24 E-value=0.011 Score=62.70 Aligned_cols=87 Identities=20% Similarity=0.219 Sum_probs=64.0
Q ss_pred CccCCCeeecCCCeeEEEEEeCCC--cEEEEEEccCCChhcHHHHHHHHHHHHhcCC----CcccceEEEE-EeCCeEEE
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDG--TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYC-DEEGEQVL 697 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g--~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H----~Niv~l~g~~-~~~~~~~L 697 (722)
.|.....||+|+||.||.+.-... ..+|+|.-..........+..|+.++..+.+ +++.++++.. ..++..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 688889999999999999985443 4788887754322222267788888888863 5788888888 47778999
Q ss_pred EecccccCcHHHHHH
Q 004953 698 PLKLYIYLFIFQFSI 712 (722)
Q Consensus 698 v~ey~~~G~L~~~l~ 712 (722)
||+.+ +-+|.+.++
T Consensus 99 VM~l~-G~sL~dl~~ 112 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRK 112 (322)
T ss_pred EEecc-CccHHHHHH
Confidence 98765 556666543
No 489
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.21 E-value=0.00018 Score=70.93 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=56.3
Q ss_pred CCCCCEEECCCCCCccCCCccccCCCCCCEEeccCCcCCCCCCccCCCCCCCcEEEcccCCCCCCC-chhhcCcCCCCEE
Q 004953 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSL-PKSFANLNKTRHF 183 (722)
Q Consensus 105 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L 183 (722)
+.+.+.|++.++.++++- -...|+.|++|.|+-|+|+..-| +..+++|++|+|..|.|.... -..+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DIs--ic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDIS--ICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHHH--HHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 456677888888776432 24677888888888888875533 667778888888888776432 1245566677777
Q ss_pred ECCCccccCC
Q 004953 184 HMNNNSISGQ 193 (722)
Q Consensus 184 ~L~~N~l~~~ 193 (722)
.|..|.-.+.
T Consensus 94 WL~ENPCc~~ 103 (388)
T KOG2123|consen 94 WLDENPCCGE 103 (388)
T ss_pred hhccCCcccc
Confidence 7766665443
No 490
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=95.98 E-value=0.0037 Score=64.72 Aligned_cols=89 Identities=24% Similarity=0.321 Sum_probs=66.5
Q ss_pred hcCccCCCeeecCCCeeEEEEEeC-CCcEEEEEEccCCChhcHHHHHHHHHHHHhcCC--C----cccceEEEEEeCCeE
Q 004953 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--R----NLVSLVGYCDEEGEQ 695 (722)
Q Consensus 623 t~~f~~~~~iG~G~fG~Vy~g~l~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~----Niv~l~g~~~~~~~~ 695 (722)
+..|.....+|+|.||.|-++.-. .+..||||.++.-.. -.+.-.-|++++.++.+ | -+|++.+|+.-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 566777889999999999998753 478999999875322 13456789999999932 2 368888888888999
Q ss_pred EEEecccccCcHHHHHHH
Q 004953 696 VLPLKLYIYLFIFQFSIK 713 (722)
Q Consensus 696 ~Lv~ey~~~G~L~~~l~~ 713 (722)
.+|+|.|. -++++|+++
T Consensus 167 CivfellG-~S~~dFlk~ 183 (415)
T KOG0671|consen 167 CIVFELLG-LSTFDFLKE 183 (415)
T ss_pred EEEEeccC-hhHHHHhcc
Confidence 99999873 355555443
No 491
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.94 E-value=0.011 Score=60.26 Aligned_cols=84 Identities=19% Similarity=0.284 Sum_probs=62.1
Q ss_pred CccCCCeeecCCCeeEEEEE-eCCCcEEEEEEccCCChhcHHHHHHHHHHHHhc-CCCcccceEEEEEeCCeEEEEeccc
Q 004953 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQVLPLKLY 702 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~-l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~Niv~l~g~~~~~~~~~Lv~ey~ 702 (722)
+|...+.||+|+||..+.|+ +=++++||||.=...+. .-+...|-+..+-+ .-+.|...+-|-.++..-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 57888999999999999998 55799999997543322 22456666666666 4578888776666677889999988
Q ss_pred cc--CcHHHH
Q 004953 703 IY--LFIFQF 710 (722)
Q Consensus 703 ~~--G~L~~~ 710 (722)
.- .||+||
T Consensus 107 GPSLEDLFD~ 116 (449)
T KOG1165|consen 107 GPSLEDLFDL 116 (449)
T ss_pred CcCHHHHHHH
Confidence 54 367666
No 492
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.69 E-value=0.027 Score=52.77 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=56.6
Q ss_pred CCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCCCcccceEEEEEeCCeEEEEecccccCcH
Q 004953 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQVLPLKLYIYLFI 707 (722)
Q Consensus 628 ~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~Niv~l~g~~~~~~~~~Lv~ey~~~G~L 707 (722)
....||+|.+|.||.|.+ .|..+|+|+-+..+ ....+..|++++..+.-.++-+=+-.+ ++-++.|||+.|-.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEW-RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeec-cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcch
Confidence 456799999999999999 56689999876543 346799999999998877776533222 334556999998666
Q ss_pred HH
Q 004953 708 FQ 709 (722)
Q Consensus 708 ~~ 709 (722)
.+
T Consensus 100 ~~ 101 (201)
T COG2112 100 GK 101 (201)
T ss_pred hh
Confidence 43
No 493
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.54 E-value=3.9e-05 Score=84.70 Aligned_cols=182 Identities=23% Similarity=0.235 Sum_probs=104.8
Q ss_pred eeEEEcCCCCCccccCc----cccCCCCCCEEECCCCCCccCCCc----cccCC-CCCCEEeccCCcCCCC----CCccC
Q 004953 84 LRELQLLNLNLSGNLSP----EIGRLSYLTILDFMWNKISGSIPK----EIGNI-KSLELLLLNGNELTGS----LPEEL 150 (722)
Q Consensus 84 l~~L~L~~~~l~~~~~~----~~~~l~~L~~L~Ls~n~l~~~~p~----~~~~l-~~L~~L~L~~n~l~~~----~p~~~ 150 (722)
+..|.|.+|.+...... .+.....|+.|++++|.+.+.--. .+... ..|++|++..|.++.. +.+.+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 67778888887654332 345577888888888888732211 12222 5567777777777643 34445
Q ss_pred CCCCCCcEEEcccCCCCC----CCchhhc----CcCCCCEEECCCccccCCC----CcCCCCCCc-cceeecccCCCCCC
Q 004953 151 GYLPKLDRIQIDQNYISG----SLPKSFA----NLNKTRHFHMNNNSISGQI----PPELSRLPS-LVHMLLDNNNLTGY 217 (722)
Q Consensus 151 ~~l~~L~~L~L~~N~l~~----~~p~~~~----~l~~L~~L~L~~N~l~~~~----~~~l~~l~~-L~~L~L~~N~l~~~ 217 (722)
.....++.+++..|.+.. .++..+. ...++++|.+++|.++... ...+...+. +..|++..|++.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 556777888888887641 1222222 3566777777777665221 112333444 55577777766533
Q ss_pred ----CCccCCCC-CCCcEEECcCCCCCCCC---cchhccCCCCCcEEEccCCCCcc
Q 004953 218 ----LPPELSEL-PKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQG 265 (722)
Q Consensus 218 ----~~~~l~~l-~~L~~L~l~~N~l~~~~---~~~~~~~l~~L~~L~L~~N~l~~ 265 (722)
..+.+..+ ..++.+++..|.|+... +...+..++.++++.++.|.+..
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 22233444 56667777777665421 12334455566777777776653
No 494
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.08 E-value=0.12 Score=57.73 Aligned_cols=82 Identities=22% Similarity=0.236 Sum_probs=54.8
Q ss_pred CccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhc-------------------------------------HHHH
Q 004953 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-------------------------------------EKEF 667 (722)
Q Consensus 625 ~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~-------------------------------------~~~f 667 (722)
.|+ .+.||.-+.|+||+|++++|+.||||+.+++-.+. +-+|
T Consensus 163 ~f~-~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF 241 (538)
T KOG1235|consen 163 EFD-EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDF 241 (538)
T ss_pred hcC-cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcch
Confidence 454 36899999999999999999999999986642210 0136
Q ss_pred HHHHHHHHh----cCCCc---ccceEEEEEe-CCeEEEEecccccCcH
Q 004953 668 LTEIQFLSR----LHHRN---LVSLVGYCDE-EGEQVLPLKLYIYLFI 707 (722)
Q Consensus 668 ~~E~~~l~~----l~H~N---iv~l~g~~~~-~~~~~Lv~ey~~~G~L 707 (722)
.+|++-..+ ++|-+ =|.+=..+++ ...+.|+||||+|.-+
T Consensus 242 ~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i 289 (538)
T KOG1235|consen 242 TKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKI 289 (538)
T ss_pred HHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccC
Confidence 667654443 35666 1222233333 3567899999999855
No 495
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=93.93 E-value=0.03 Score=49.74 Aligned_cols=46 Identities=24% Similarity=0.410 Sum_probs=35.1
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHH
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLS 675 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~ 675 (722)
|+ .+.||.|+.|+||+|++++|+.||||..++... +.+...+++|.
T Consensus 14 fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~---~~i~~Dl~~l~ 59 (119)
T PF03109_consen 14 FD-PEPLASASIAQVHRARLKDGEEVAVKVQRPGIE---EQIEADLRILR 59 (119)
T ss_pred CC-cchhhheehhhheeeeecccchhhhhhcchHHH---HHHHHHHHHHH
Confidence 54 478999999999999999999999999876532 34445555554
No 496
>PRK10593 hypothetical protein; Provisional
Probab=93.70 E-value=0.39 Score=50.20 Aligned_cols=79 Identities=16% Similarity=0.086 Sum_probs=58.3
Q ss_pred ccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhcHHHHHHHHHHHHhcCC---CcccceEEEEEe---CCeEEEEe
Q 004953 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH---RNLVSLVGYCDE---EGEQVLPL 699 (722)
Q Consensus 626 f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H---~Niv~l~g~~~~---~~~~~Lv~ 699 (722)
....+.||.|..+.||+-...+++ +.||..+.. .....|.+|++.|..+.- -.+.+++++|.. .+..+|||
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQGN-PMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hheeeecCCccceeEEEEEcCCCC-EEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 344567999999999999875664 566664321 123578999999998843 357888988854 36789999
Q ss_pred cccccCcH
Q 004953 700 KLYIYLFI 707 (722)
Q Consensus 700 ey~~~G~L 707 (722)
||++++.+
T Consensus 93 E~i~G~~~ 100 (297)
T PRK10593 93 ERLRGVSV 100 (297)
T ss_pred eccCCEec
Confidence 99999865
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=93.69 E-value=0.11 Score=57.97 Aligned_cols=86 Identities=21% Similarity=0.226 Sum_probs=58.2
Q ss_pred cCccCCCeeecCCCeeEEEEEeCCCcEEEEEEccCCChhc----------------------------------------
Q 004953 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---------------------------------------- 663 (722)
Q Consensus 624 ~~f~~~~~iG~G~fG~Vy~g~l~~g~~vAVK~l~~~~~~~---------------------------------------- 663 (722)
..|+ .+-|+.++.|+||+|++++|+.||||+.+++-...
T Consensus 126 ~eF~-~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFE-PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcC-CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 3454 36899999999999999999999999986542110
Q ss_pred HHHHHHHHHHHHhc----CCCcccceEEEEEe-CCeEEEEecccccCcHHHH
Q 004953 664 EKEFLTEIQFLSRL----HHRNLVSLVGYCDE-EGEQVLPLKLYIYLFIFQF 710 (722)
Q Consensus 664 ~~~f~~E~~~l~~l----~H~Niv~l~g~~~~-~~~~~Lv~ey~~~G~L~~~ 710 (722)
+-+|.+|+.-+.++ ++..=|++=..|++ .+...|+|||++|--+.+.
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~ 256 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDI 256 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccH
Confidence 01245566666554 33333344445544 4677899999999877555
No 498
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.56 E-value=0.026 Score=33.50 Aligned_cols=12 Identities=67% Similarity=0.841 Sum_probs=4.9
Q ss_pred CCEEeccCCcCC
Q 004953 132 LELLLLNGNELT 143 (722)
Q Consensus 132 L~~L~L~~n~l~ 143 (722)
|++|||++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 334444444443
No 499
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.46 E-value=0.037 Score=32.83 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=4.9
Q ss_pred CCEEeCCCCcCc
Q 004953 323 LQRLFIANNSLS 334 (722)
Q Consensus 323 L~~L~L~~N~l~ 334 (722)
|++|||++|+|+
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 334444444444
No 500
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=93.14 E-value=0.071 Score=57.57 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=70.2
Q ss_pred cccccHHHHHHhhcCccCCCeeecCCCeeEEEEEe-CCCcEEEEEEccCCChhcHHHHHHHHHHHHhcC------CCccc
Q 004953 611 VRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH------HRNLV 683 (722)
Q Consensus 611 ~~~~~~~~~~~~t~~f~~~~~iG~G~fG~Vy~g~l-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~------H~Niv 683 (722)
.-.+.+.|+.. ..|......|+|-|++|.+|.- ..|..||||.++... ...+.=..|+++|.++. --+.+
T Consensus 421 YYrv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 421 YYRVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred eEEEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 33444555543 3466666789999999999984 458899999996532 12234468999999884 23678
Q ss_pred ceEEEEEeCCeEEEEecccccCcHHHHHHHH
Q 004953 684 SLVGYCDEEGEQVLPLKLYIYLFIFQFSIKL 714 (722)
Q Consensus 684 ~l~g~~~~~~~~~Lv~ey~~~G~L~~~l~~~ 714 (722)
+|+-.+...+..+||+|-+. -+|.+.+++.
T Consensus 498 rl~r~F~hknHLClVFE~Ls-lNLRevLKKy 527 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLS-LNLREVLKKY 527 (752)
T ss_pred HHHHHhhhcceeEEEehhhh-chHHHHHHHh
Confidence 88888888899999999663 3455554443
Done!